Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
05:02:18 (1790799): wrapper (7.7.26015): starting
05:02:18 (1790799): wrapper: running run_atlas (--nthreads 8)
[2026-03-16 05:02:18] Arguments: --nthreads 8
[2026-03-16 05:02:18] Threads: 8
[2026-03-16 05:02:18] Checking for CVMFS
[2026-03-16 05:02:18] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-16 05:02:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-16 05:02:18] Running cvmfs_config stat atlas.cern.ch
[2026-03-16 05:02:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-16 05:02:19] 2.13.3.0 9119 116052 225368 157346 1 19 23146030 39288833 128 16776704 0 66363299 99.631 66180042 36661 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-16 05:02:19] CVMFS is ok
[2026-03-16 05:02:19] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-16 05:02:19] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-16 05:02:19] Further information can be found at the LHC@home message board.
[2026-03-16 05:02:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-16 05:02:19] Checking for apptainer binary...
[2026-03-16 05:02:19] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-16 05:02:19] Running /usr/bin/apptainer --version
[2026-03-16 05:02:19] apptainer version 1.4.5-2.el9
[2026-03-16 05:02:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-16 05:02:19] c-210-12.aglt2.org
[2026-03-16 05:02:19] apptainer works
[2026-03-16 05:02:19] Set ATHENA_PROC_NUMBER=8
[2026-03-16 05:02:19] Set ATHENA_CORE_NUMBER=8
[2026-03-16 05:02:19] Starting ATLAS job with PandaID=7056653734
[2026-03-16 05:02:19] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-16 06:55:45]  *** The last 200 lines of the pilot log: ***
[2026-03-16 06:55:45] 2026-03-16 10:54:44,328 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-16 06:55:45] 2026-03-16 10:54:44,328 | INFO     | log transfer has been attempted: DONE
[2026-03-16 06:55:45] 2026-03-16 10:54:44,328 | INFO     | job 7056653734 has finished - writing final server update
[2026-03-16 06:55:45] 2026-03-16 10:54:44,328 | INFO     | total number of processed events: 400 (read)
[2026-03-16 06:55:45] 2026-03-16 10:54:44,335 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-7056653734/memory_monitor_summary.json (trf name=prmon)
[2026-03-16 06:55:45] 2026-03-16 10:54:44,335 | INFO     | extracted standard info from prmon json
[2026-03-16 06:55:45] 2026-03-16 10:54:44,336 | INFO     | extracted standard memory fields from prmon json
[2026-03-16 06:55:45] 2026-03-16 10:54:44,336 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-16 06:55:45] 2026-03-16 10:54:44,336 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-16 06:55:45] 2026-03-16 10:54:44,336 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-16 06:55:45] 2026-03-16 10:54:44,339 | INFO     | fitting pss+swap vs Time
[2026-03-16 06:55:45] 2026-03-16 10:54:44,339 | INFO     | sum of square deviations: 424045160.0
[2026-03-16 06:55:45] 2026-03-16 10:54:44,340 | INFO     | sum of deviations: 10104268933.0
[2026-03-16 06:55:45] 2026-03-16 10:54:44,340 | INFO     | mean x: 1773655120.0
[2026-03-16 06:55:45] 2026-03-16 10:54:44,340 | INFO     | mean y: 2449022.2162162163
[2026-03-16 06:55:45] 2026-03-16 10:54:44,340 | INFO     | intersect: -42260710700.84816
[2026-03-16 06:55:45] 2026-03-16 10:54:44,340 | INFO     | chi2: 2.1850243538935232
[2026-03-16 06:55:45] 2026-03-16 10:54:44,341 | INFO     | sum of square deviations: 369281342.5
[2026-03-16 06:55:45] 2026-03-16 10:54:44,341 | INFO     | sum of deviations: 16342895611.5
[2026-03-16 06:55:45] 2026-03-16 10:54:44,341 | INFO     | mean x: 1773654967.5
[2026-03-16 06:55:45] 2026-03-16 10:54:44,342 | INFO     | mean y: 2465681.7264150945
[2026-03-16 06:55:45] 2026-03-16 10:54:44,342 | INFO     | intersect: -78492314987.21823
[2026-03-16 06:55:45] 2026-03-16 10:54:44,342 | INFO     | chi2: 1.4856493214443403
[2026-03-16 06:55:45] 2026-03-16 10:54:44,342 | INFO     | current chi2=1.4856493214443403 (change=32.007653882802614 %)
[2026-03-16 06:55:45] 2026-03-16 10:54:44,342 | INFO     | sum of square deviations: 319447850.0
[2026-03-16 06:55:45] 2026-03-16 10:54:44,343 | INFO     | sum of deviations: 15424577547.000002
[2026-03-16 06:55:45] 2026-03-16 10:54:44,343 | INFO     | mean x: 1773654815.0
[2026-03-16 06:55:45] 2026-03-16 10:54:44,343 | INFO     | mean y: 2462869.2475247523
[2026-03-16 06:55:45] 2026-03-16 10:54:44,343 | INFO     | intersect: -85638671467.94536
[2026-03-16 06:55:45] 2026-03-16 10:54:44,343 | INFO     | chi2: 1.4884733626299695
[2026-03-16 06:55:45] 2026-03-16 10:54:44,344 | INFO     | current chi2=1.4884733626299695 (change=-0.19008800696545075 %)
[2026-03-16 06:55:45] 2026-03-16 10:54:44,344 | INFO     | right removable region: 100
[2026-03-16 06:55:45] 2026-03-16 10:54:44,344 | INFO     | sum of square deviations: 369281342.5
[2026-03-16 06:55:45] 2026-03-16 10:54:44,345 | INFO     | sum of deviations: -5800486492.5
[2026-03-16 06:55:45] 2026-03-16 10:54:44,345 | INFO     | mean x: 1773655272.5
[2026-03-16 06:55:45] 2026-03-16 10:54:44,345 | INFO     | mean y: 2492287.066037736
[2026-03-16 06:55:45] 2026-03-16 10:54:44,345 | INFO     | intersect: 27862181544.146923
[2026-03-16 06:55:45] 2026-03-16 10:54:44,346 | INFO     | chi2: 0.7365726498513101
[2026-03-16 06:55:45] 2026-03-16 10:54:44,346 | INFO     | current chi2=0.7365726498513101 (change=66.28995697284556 %)
[2026-03-16 06:55:45] 2026-03-16 10:54:44,346 | INFO     | sum of square deviations: 319447850.0
[2026-03-16 06:55:45] 2026-03-16 10:54:44,347 | INFO     | sum of deviations: -5077726498.0
[2026-03-16 06:55:45] 2026-03-16 10:54:44,347 | INFO     | mean x: 1773655425.0
[2026-03-16 06:55:45] 2026-03-16 10:54:44,347 | INFO     | mean y: 2490055.702970297
[2026-03-16 06:55:45] 2026-03-16 10:54:44,347 | INFO     | intersect: 28195314486.494884
[2026-03-16 06:55:45] 2026-03-16 10:54:44,347 | INFO     | chi2: 0.7366151686816426
[2026-03-16 06:55:45] 2026-03-16 10:54:44,347 | INFO     | current chi2=0.7366151686816426 (change=-0.00577252363918807 %)
[2026-03-16 06:55:45] 2026-03-16 10:54:44,347 | INFO     | left removable region: 20
[2026-03-16 06:55:45] 2026-03-16 10:54:44,348 | INFO     | sum of square deviations: 158737860.0
[2026-03-16 06:55:45] 2026-03-16 10:54:44,348 | INFO     | sum of deviations: 940334032.0
[2026-03-16 06:55:45] 2026-03-16 10:54:44,348 | INFO     | mean x: 1773655394.5
[2026-03-16 06:55:45] 2026-03-16 10:54:44,348 | INFO     | mean y: 2510503.975
[2026-03-16 06:55:45] 2026-03-16 10:54:44,349 | INFO     | intersect: -10504299456.09839
[2026-03-16 06:55:45] 2026-03-16 10:54:44,349 | INFO     | chi2: 8.93827516371488e-05
[2026-03-16 06:55:45] 2026-03-16 10:54:44,349 | INFO     | current memory leak: 5.92 B/s (using 80 data points, chi2=0.00)
[2026-03-16 06:55:45] 2026-03-16 10:54:44,349 | INFO     | could have reported an average CPU frequency of 2760 MHz (7 samples)
[2026-03-16 06:55:45] 2026-03-16 10:54:44,350 | INFO     | ..............................
[2026-03-16 06:55:45] 2026-03-16 10:54:44,350 | INFO     | . Timing measurements:
[2026-03-16 06:55:45] 2026-03-16 10:54:44,350 | INFO     | . get job = 0 s
[2026-03-16 06:55:45] 2026-03-16 10:54:44,350 | INFO     | . initial setup = 4 s
[2026-03-16 06:55:45] 2026-03-16 10:54:44,350 | INFO     | . payload setup = 3 s
[2026-03-16 06:55:45] 2026-03-16 10:54:44,350 | INFO     | . stage-in = 0 s
[2026-03-16 06:55:45] 2026-03-16 10:54:44,350 | INFO     | . payload execution = 6713 s
[2026-03-16 06:55:45] 2026-03-16 10:54:44,350 | INFO     | . stage-out = 0 s
[2026-03-16 06:55:45] 2026-03-16 10:54:44,350 | INFO     | . log creation = 0 s
[2026-03-16 06:55:45] 2026-03-16 10:54:44,350 | INFO     | ..............................
[2026-03-16 06:55:45] 2026-03-16 10:54:44,676 | INFO     | 
[2026-03-16 06:55:45] 2026-03-16 10:54:44,677 | INFO     | job summary report
[2026-03-16 06:55:45] 2026-03-16 10:54:44,677 | INFO     | --------------------------------------------------
[2026-03-16 06:55:45] 2026-03-16 10:54:44,677 | INFO     | PanDA job id: 7056653734
[2026-03-16 06:55:45] 2026-03-16 10:54:44,677 | INFO     | task id: 48967102
[2026-03-16 06:55:45] 2026-03-16 10:54:44,677 | INFO     | errors: (none)
[2026-03-16 06:55:45] 2026-03-16 10:54:44,677 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-16 06:55:45] 2026-03-16 10:54:44,677 | INFO     | pilot state: finished 
[2026-03-16 06:55:45] 2026-03-16 10:54:44,677 | INFO     | transexitcode: 0
[2026-03-16 06:55:45] 2026-03-16 10:54:44,677 | INFO     | exeerrorcode: 0
[2026-03-16 06:55:45] 2026-03-16 10:54:44,678 | INFO     | exeerrordiag: 
[2026-03-16 06:55:45] 2026-03-16 10:54:44,678 | INFO     | exitcode: 0
[2026-03-16 06:55:45] 2026-03-16 10:54:44,678 | INFO     | exitmsg: OK
[2026-03-16 06:55:45] 2026-03-16 10:54:44,678 | INFO     | cpuconsumptiontime: 50694 s
[2026-03-16 06:55:45] 2026-03-16 10:54:44,678 | INFO     | nevents: 400
[2026-03-16 06:55:45] 2026-03-16 10:54:44,678 | INFO     | neventsw: 0
[2026-03-16 06:55:45] 2026-03-16 10:54:44,678 | INFO     | pid: 1820438
[2026-03-16 06:55:45] 2026-03-16 10:54:44,678 | INFO     | pgrp: 1820438
[2026-03-16 06:55:45] 2026-03-16 10:54:44,678 | INFO     | corecount: 8
[2026-03-16 06:55:45] 2026-03-16 10:54:44,679 | INFO     | event service: False
[2026-03-16 06:55:45] 2026-03-16 10:54:44,679 | INFO     | sizes: {0: 2280254, 11: 2280254, 6720: 2307448, 6722: 2316502, 6725: 2316640}
[2026-03-16 06:55:45] 2026-03-16 10:54:44,679 | INFO     | --------------------------------------------------
[2026-03-16 06:55:45] 2026-03-16 10:54:44,679 | INFO     | 
[2026-03-16 06:55:45] 2026-03-16 10:54:44,679 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-03-16 06:55:45] 2026-03-16 10:54:44,712 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-16 06:55:45] 2026-03-16 10:54:44,712 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-16 06:55:45] 2026-03-16 10:54:44,712 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-16 06:55:45] 2026-03-16 10:54:44,712 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-16 06:55:45] 2026-03-16 10:54:44,713 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-16 06:55:45] 2026-03-16 10:54:44,713 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-16 06:55:45] 2026-03-16 10:54:44,713 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-16 06:55:45] 2026-03-16 10:54:44,713 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-16 06:55:45] 2026-03-16 10:54:44,713 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-16 06:55:45] 2026-03-16 10:54:44,713 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-16 06:55:45] 2026-03-16 10:54:44,713 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-16 06:55:45] 2026-03-16 10:54:44,713 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-16 06:55:45] 2026-03-16 10:54:44,713 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-16 06:55:45] 2026-03-16 10:54:44,713 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-16 06:55:45] 2026-03-16 10:54:44,714 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-16 06:55:45] 2026-03-16 10:54:44,714 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-16 06:55:45] 2026-03-16 10:54:44,714 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-16 06:55:45] 2026-03-16 10:54:44,714 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-16 06:55:45] 2026-03-16 10:54:44,714 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-16 06:55:45] 2026-03-16 10:54:44,714 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-16 06:55:45] 2026-03-16 10:54:44,714 | INFO     | job 7056653734 has completed (purged errors)
[2026-03-16 06:55:45] 2026-03-16 10:54:44,715 | INFO     | overall cleanup function is called
[2026-03-16 06:55:45] 2026-03-16 10:54:45,727 | INFO     | --- collectZombieJob: --- 10, [1820438]
[2026-03-16 06:55:45] 2026-03-16 10:54:45,727 | INFO     | zombie collector waiting for pid 1820438
[2026-03-16 06:55:45] 2026-03-16 10:54:45,727 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-16 06:55:45] 2026-03-16 10:54:45,727 | INFO     | collected zombie processes
[2026-03-16 06:55:45] 2026-03-16 10:54:45,728 | INFO     | will attempt to kill all subprocesses of pid=1820438
[2026-03-16 06:55:45] 2026-03-16 10:54:45,989 | INFO     | process IDs to be killed: [1820438] (in reverse order)
[2026-03-16 06:55:45] 2026-03-16 10:54:46,119 | WARNING  | found no corresponding commands to process id(s)
[2026-03-16 06:55:45] 2026-03-16 10:54:46,119 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-16 06:55:45] 2026-03-16 10:54:46,131 | INFO     | did not find any defunct processes belonging to 1820438
[2026-03-16 06:55:45] 2026-03-16 10:54:46,139 | INFO     | did not find any defunct processes belonging to 1820438
[2026-03-16 06:55:45] 2026-03-16 10:54:46,139 | INFO     | ready for new job
[2026-03-16 06:55:45] 2026-03-16 10:54:46,140 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-16 06:55:45] 2026-03-16 10:54:46,141 | INFO     | **************************************
[2026-03-16 06:55:45] 2026-03-16 10:54:46,141 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-16 06:55:45] 2026-03-16 10:54:46,142 | INFO     | **************************************
[2026-03-16 06:55:45] 2026-03-16 10:54:46,142 | INFO     | 
[2026-03-16 06:55:45] 2026-03-16 10:54:46,144 | INFO     | architecture information:
[2026-03-16 06:55:45] 2026-03-16 10:54:46,144 | INFO     | executing command: cat /etc/os-release
[2026-03-16 06:55:45] 2026-03-16 10:54:46,174 | INFO     | cat /etc/os-release:
[2026-03-16 06:55:45] NAME="CentOS Linux"
[2026-03-16 06:55:45] VERSION="7 (Core)"
[2026-03-16 06:55:45] ID="centos"
[2026-03-16 06:55:45] ID_LIKE="rhel fedora"
[2026-03-16 06:55:45] VERSION_ID="7"
[2026-03-16 06:55:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-16 06:55:45] ANSI_COLOR="0;31"
[2026-03-16 06:55:45] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-16 06:55:45] HOME_URL="https://www.centos.org/"
[2026-03-16 06:55:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-16 06:55:45] 
[2026-03-16 06:55:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-16 06:55:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-16 06:55:45] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-16 06:55:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-16 06:55:45] 
[2026-03-16 06:55:45] 2026-03-16 10:54:46,175 | INFO     | **************************************
[2026-03-16 06:55:45] 2026-03-16 10:54:46,678 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-03-16 06:55:45] 2026-03-16 10:54:46,726 | INFO     | sufficient remaining disk space (51330940928 B)
[2026-03-16 06:55:45] 2026-03-16 10:54:46,727 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-16 06:55:45] 2026-03-16 10:54:46,727 | INFO     | current server update state: UPDATING_FINAL
[2026-03-16 06:55:45] 2026-03-16 10:54:46,727 | INFO     | update_server=False
[2026-03-16 06:55:45] 2026-03-16 10:54:46,727 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-16 06:55:45] 2026-03-16 10:54:46,918 | INFO     | all payload control threads have been joined
[2026-03-16 06:55:45] 2026-03-16 10:54:47,086 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-16 06:55:45] 2026-03-16 10:54:47,086 | INFO     | aborting loop
[2026-03-16 06:55:45] 2026-03-16 10:54:47,486 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-16 06:55:45] 2026-03-16 10:54:47,514 | INFO     | all data control threads have been joined
[2026-03-16 06:55:45] 2026-03-16 10:54:47,732 | INFO     | [job] retrieve thread has finished
[2026-03-16 06:55:45] 2026-03-16 10:54:47,897 | INFO     | [payload] execute_payloads thread has finished
[2026-03-16 06:55:45] 2026-03-16 10:54:47,924 | INFO     | [payload] control thread has finished
[2026-03-16 06:55:45] 2026-03-16 10:54:48,091 | INFO     | [job] job monitor thread has finished
[2026-03-16 06:55:45] 2026-03-16 10:54:48,095 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-16 06:55:45] 2026-03-16 10:54:48,273 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-16 06:55:45] 2026-03-16 10:54:48,344 | INFO     | all job control threads have been joined
[2026-03-16 06:55:45] 2026-03-16 10:54:48,512 | INFO     | [payload] validate_post thread has finished
[2026-03-16 06:55:45] 2026-03-16 10:54:48,519 | INFO     | [data] control thread has finished
[2026-03-16 06:55:45] 2026-03-16 10:54:48,758 | INFO     | [payload] failed_post thread has finished
[2026-03-16 06:55:45] 2026-03-16 10:54:48,845 | INFO     | [payload] validate_pre thread has finished
[2026-03-16 06:55:45] 2026-03-16 10:54:48,952 | INFO     | [job] create_data_payload thread has finished
[2026-03-16 06:55:45] 2026-03-16 10:54:49,169 | INFO     | [job] validate thread has finished
[2026-03-16 06:55:45] 2026-03-16 10:54:49,173 | INFO     | [data] copytool_in thread has finished
[2026-03-16 06:55:45] 2026-03-16 10:54:49,350 | INFO     | [job] control thread has finished
[2026-03-16 06:55:45] 2026-03-16 10:54:49,469 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-16 06:55:45] 2026-03-16 10:54:49,494 | INFO     | [data] copytool_out thread has finished
[2026-03-16 06:55:45] 2026-03-16 10:54:50,475 | INFO     | [job] queue monitor thread has finished
[2026-03-16 06:55:45] 2026-03-16 10:54:52,104 | INFO     | [data] queue_monitor thread has finished
[2026-03-16 06:55:45] 2026-03-16 10:55:16,770 | INFO     | PID=1796739 has CPU usage=6.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-16 06:55:45] 2026-03-16 10:55:16,773 | INFO     | .. there are 10 such processes running
[2026-03-16 06:55:45] 2026-03-16 10:55:16,773 | INFO     | found 0 job(s) in 20 queues
[2026-03-16 06:55:45] 2026-03-16 10:55:16,773 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-16 06:55:45] 2026-03-16 10:55:16,774 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-16 06:55:45] 2026-03-16 10:55:39,065 | INFO     | [monitor] cgroup control has ended
[2026-03-16 06:55:45] 2026-03-16 10:55:39,788 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140666731779904)>', '<ExcThread(monitor, started 140666285848320)>']
[2026-03-16 06:55:45] 2026-03-16 10:55:39,929 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-16 06:55:45] 2026-03-16 10:55:39,929 | INFO     | [monitor] control thread has ended
[2026-03-16 06:55:45] 2026-03-16 10:55:44,814 | INFO     | all workflow threads have been joined
[2026-03-16 06:55:45] 2026-03-16 10:55:44,814 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-16 06:55:45] 2026-03-16 10:55:44,814 | INFO     | traces error code: 0
[2026-03-16 06:55:45] 2026-03-16 10:55:44,815 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-16 06:55:45] 2026-03-16 10:55:45,139 [wrapper] ==== pilot stdout END ====
[2026-03-16 06:55:45] 2026-03-16 10:55:45,167 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-16 06:55:45] 2026-03-16 10:55:45,200 [wrapper] pilotpid: 1796739
[2026-03-16 06:55:45] 2026-03-16 10:55:45,230 [wrapper] Pilot exit status: 0
[2026-03-16 06:55:45] 2026-03-16 10:55:45,320 [wrapper] pandaids: 7056653734
[2026-03-16 06:55:45] 2026-03-16 10:55:45,397 [wrapper] cleanup supervisor_pilot 1964287 1796740
[2026-03-16 06:55:45] 2026-03-16 10:55:45,409 [wrapper] Test setup, not cleaning
[2026-03-16 06:55:45] 2026-03-16 10:55:45,442 [wrapper] apfmon messages muted
[2026-03-16 06:55:45] 2026-03-16 10:55:45,456 [wrapper] ==== wrapper stdout END ====
[2026-03-16 06:55:45] 2026-03-16 10:55:45,474 [wrapper] ==== wrapper stderr END ====
[2026-03-16 06:55:45]  *** Error codes and diagnostics ***
[2026-03-16 06:55:45]     "exeErrorCode": 0,
[2026-03-16 06:55:45]     "exeErrorDiag": "",
[2026-03-16 06:55:45]     "pilotErrorCode": 0,
[2026-03-16 06:55:45]     "pilotErrorDiag": "",
[2026-03-16 06:55:45]  *** Listing of results directory ***
[2026-03-16 06:55:45] total 401900
[2026-03-16 06:55:45] -rw-r--r--. 1 boincer umatlas    585013 Mar 16 04:25 pilot3.tar.gz
[2026-03-16 06:55:45] -rw-r--r--. 1 boincer umatlas      5111 Mar 16 04:58 queuedata.json
[2026-03-16 06:55:45] -rwx------. 1 boincer umatlas     36322 Mar 16 05:01 runpilot2-wrapper.sh
[2026-03-16 06:55:45] -rw-r--r--. 1 boincer umatlas       100 Mar 16 05:02 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-16 06:55:45] -rwxr-xr-x. 1 boincer umatlas      7986 Mar 16 05:02 run_atlas
[2026-03-16 06:55:45] -rw-r--r--. 1 boincer umatlas       105 Mar 16 05:02 job.xml
[2026-03-16 06:55:45] -rw-r--r--. 2 boincer umatlas 212686205 Mar 16 05:02 EVNT.48967100._000047.pool.root.1
[2026-03-16 06:55:45] -rw-r--r--. 2 boincer umatlas     15845 Mar 16 05:02 start_atlas.sh
[2026-03-16 06:55:45] drwxrwx--x. 2 boincer umatlas      4096 Mar 16 05:02 shared
[2026-03-16 06:55:45] -rw-r--r--. 2 boincer umatlas    597522 Mar 16 05:02 input.tar.gz
[2026-03-16 06:55:45] -rw-r--r--. 1 boincer umatlas         0 Mar 16 05:02 boinc_lockfile
[2026-03-16 06:55:45] -rw-r--r--. 1 boincer umatlas      2578 Mar 16 05:02 pandaJob.out
[2026-03-16 06:55:45] -rw-------. 1 boincer umatlas        57 Mar 16 05:02 setup.sh.local
[2026-03-16 06:55:45] -rw-------. 1 boincer umatlas   1006405 Mar 16 05:02 agis_schedconf.cvmfs.json
[2026-03-16 06:55:45] -rw-------. 1 boincer umatlas   1511579 Mar 16 05:02 agis_ddmendpoints.agis.ALL.json
[2026-03-16 06:55:45] -rw-------. 1 boincer umatlas       442 Mar 16 05:02 workernode_map.json
[2026-03-16 06:55:45] drwx------. 5 boincer umatlas      4096 Mar 16 05:02 pilot3
[2026-03-16 06:55:45] -rw-r--r--. 1 boincer umatlas       529 Mar 16 06:53 boinc_task_state.xml
[2026-03-16 06:55:45] -rw-------. 1 boincer umatlas 192230882 Mar 16 06:53 HITS.48967102._001211.pool.root.1
[2026-03-16 06:55:45] -rw-r--r--. 1 boincer umatlas      6661 Mar 16 06:54 init_data.xml
[2026-03-16 06:55:45] -rw-------. 1 boincer umatlas        95 Mar 16 06:54 pilot_heartbeat.json
[2026-03-16 06:55:45] -rw-------. 1 boincer umatlas      1039 Mar 16 06:54 memory_monitor_summary.json
[2026-03-16 06:55:45] -rw-------. 1 boincer umatlas    371519 Mar 16 06:54 log.48967102._001211.job.log.tgz.1
[2026-03-16 06:55:45] -rw-------. 1 boincer umatlas      6374 Mar 16 06:54 heartbeat.json
[2026-03-16 06:55:45] -rw-r--r--. 1 boincer umatlas      8192 Mar 16 06:55 boinc_mmap_file
[2026-03-16 06:55:45] -rw-r--r--. 1 boincer umatlas        27 Mar 16 06:55 wrapper_checkpoint.txt
[2026-03-16 06:55:45] -rw-------. 1 boincer umatlas      4820 Mar 16 06:55 pilotlog.txt
[2026-03-16 06:55:45] -rw-------. 1 boincer umatlas    973020 Mar 16 06:55 log.48967102._001211.job.log.1
[2026-03-16 06:55:45] -rw-------. 1 boincer umatlas       357 Mar 16 06:55 output.list
[2026-03-16 06:55:45] -rw-r--r--. 1 boincer umatlas       620 Mar 16 06:55 runtime_log
[2026-03-16 06:55:45] -rw-------. 1 boincer umatlas   1361920 Mar 16 06:55 result.tar.gz
[2026-03-16 06:55:45] -rw-r--r--. 1 boincer umatlas      9341 Mar 16 06:55 runtime_log.err
[2026-03-16 06:55:45] -rw-------. 1 boincer umatlas       652 Mar 16 06:55 k22LDmS0IM9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmljvLDmhtrYon.diag
[2026-03-16 06:55:45] -rw-r--r--. 1 boincer umatlas     21013 Mar 16 06:55 stderr.txt
[2026-03-16 06:55:45] HITS file was successfully produced:
[2026-03-16 06:55:45] -rw-------. 1 boincer umatlas 192230882 Mar 16 06:53 shared/HITS.pool.root.1
[2026-03-16 06:55:45]  *** Contents of shared directory: ***
[2026-03-16 06:55:45] total 397368
[2026-03-16 06:55:45] -rw-r--r--. 2 boincer umatlas 212686205 Mar 16 05:02 ATLAS.root_0
[2026-03-16 06:55:45] -rw-r--r--. 2 boincer umatlas     15845 Mar 16 05:02 start_atlas.sh
[2026-03-16 06:55:45] -rw-r--r--. 2 boincer umatlas    597522 Mar 16 05:02 input.tar.gz
[2026-03-16 06:55:45] -rw-------. 1 boincer umatlas 192230882 Mar 16 06:53 HITS.pool.root.1
[2026-03-16 06:55:45] -rw-------. 1 boincer umatlas   1361920 Mar 16 06:55 result.tar.gz
06:55:47 (1790799): run_atlas exited; CPU time 50846.128358
06:55:47 (1790799): called boinc_finish(0)

</stderr_txt>
]]>

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