Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
04:03:48 (428525): wrapper (7.7.26015): starting
04:03:48 (428525): wrapper: running run_atlas (--nthreads 8)
[2026-03-16 04:03:48] Arguments: --nthreads 8
[2026-03-16 04:03:48] Threads: 8
[2026-03-16 04:03:48] Checking for CVMFS
[2026-03-16 04:03:48] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-16 04:03:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-16 04:03:48] Running cvmfs_config stat atlas.cern.ch
[2026-03-16 04:03:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-16 04:03:48] 2.13.3.0 6005 116277 160156 157345 2 19 37283465 39288833 92 16776704 0 68095330 99.609 77167524 36716 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-16 04:03:48] CVMFS is ok
[2026-03-16 04:03:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-16 04:03:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-16 04:03:48] Further information can be found at the LHC@home message board.
[2026-03-16 04:03:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-16 04:03:48] Checking for apptainer binary...
[2026-03-16 04:03:48] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-16 04:03:48] Running /usr/bin/apptainer --version
[2026-03-16 04:03:48] apptainer version 1.4.5-2.el9
[2026-03-16 04:03:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-16 04:03:48] c-210-18.aglt2.org
[2026-03-16 04:03:48] apptainer works
[2026-03-16 04:03:48] Set ATHENA_PROC_NUMBER=8
[2026-03-16 04:03:48] Set ATHENA_CORE_NUMBER=8
[2026-03-16 04:03:48] Starting ATLAS job with PandaID=7056594685
[2026-03-16 04:03:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-16 05:20:10]  *** The last 200 lines of the pilot log: ***
[2026-03-16 05:20:10]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-16 05:20:10]  is_altstaged=None
[2026-03-16 05:20:10]  is_tar=False
[2026-03-16 05:20:10]  lfn=log.48967102._001085.job.log.tgz.1
[2026-03-16 05:20:10]  mtime=0
[2026-03-16 05:20:10]  protocol_id=None
[2026-03-16 05:20:10]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-16 05:20:10]  replicas=None
[2026-03-16 05:20:10]  scope=mc23_13p6TeV
[2026-03-16 05:20:10]  status=None
[2026-03-16 05:20:10]  status_code=0
[2026-03-16 05:20:10]  storage_token=
[2026-03-16 05:20:10]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-7056594685/log.48967102._001085.job.log.tgz.1
[2026-03-16 05:20:10]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/8d/08/log.48967102._001085.job.log.tgz.1
[2026-03-16 05:20:10]  workdir=None
[2026-03-16 05:20:10] ]
[2026-03-16 05:20:10] 2026-03-16 09:19:28,648 | INFO     | transferring file log.48967102._001085.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-7056594685/log.48967102._001085.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-03-16 05:20:10] 2026-03-16 09:19:28,648 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-7056594685/log.48967102._001085.job.log.tgz.1 /tmp/boinchome/slots/1/log.48967102._001085.job
[2026-03-16 05:20:10] 2026-03-16 09:19:28,660 | INFO     | adding to output.list: log.48967102._001085.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/8d/08/log.48967102._001085.job.log.tg
[2026-03-16 05:20:10] 2026-03-16 09:19:28,661 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-16 05:20:10] 2026-03-16 09:19:28,661 | INFO     | summary of transferred files:
[2026-03-16 05:20:10] 2026-03-16 09:19:28,661 | INFO     |  -- lfn=log.48967102._001085.job.log.tgz.1, status_code=0, status=transferred
[2026-03-16 05:20:10] 2026-03-16 09:19:28,661 | INFO     | stage-out finished correctly
[2026-03-16 05:20:10] 2026-03-16 09:19:28,947 | WARNING  | process 449932 can no longer be monitored (due to stat problems) - aborting
[2026-03-16 05:20:10] 2026-03-16 09:19:28,947 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-7056594685/memory_monitor_summary.json (trf name=prmon)
[2026-03-16 05:20:10] 2026-03-16 09:19:29,062 | INFO     | number of running child processes to parent process 449932: 1
[2026-03-16 05:20:10] 2026-03-16 09:19:29,062 | INFO     | maximum number of monitored processes: 6
[2026-03-16 05:20:10] 2026-03-16 09:19:29,377 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-16 05:20:10] 2026-03-16 09:19:29,669 | INFO     | job 7056594685 has state=finished
[2026-03-16 05:20:10] 2026-03-16 09:19:29,670 | INFO     | preparing for final server update for job 7056594685 in state='finished'
[2026-03-16 05:20:10] 2026-03-16 09:19:29,670 | INFO     | reading metadata from: /tmp/boinchome/slots/1/PanDA_Pilot-7056594685/jobReport.json
[2026-03-16 05:20:10] 2026-03-16 09:19:29,671 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/1/workernode_map.json
[2026-03-16 05:20:10] 2026-03-16 09:19:29,671 | INFO     | this job has now completed (state=finished)
[2026-03-16 05:20:10] 2026-03-16 09:19:29,672 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-16 05:20:10] 2026-03-16 09:19:29,672 | INFO     | log transfer has been attempted: DONE
[2026-03-16 05:20:10] 2026-03-16 09:19:29,672 | INFO     | job 7056594685 has finished - writing final server update
[2026-03-16 05:20:10] 2026-03-16 09:19:29,672 | INFO     | total number of processed events: 400 (read)
[2026-03-16 05:20:10] 2026-03-16 09:19:29,675 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-7056594685/memory_monitor_summary.json (trf name=prmon)
[2026-03-16 05:20:10] 2026-03-16 09:19:29,676 | INFO     | extracted standard info from prmon json
[2026-03-16 05:20:10] 2026-03-16 09:19:29,676 | INFO     | extracted standard memory fields from prmon json
[2026-03-16 05:20:10] 2026-03-16 09:19:29,676 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-16 05:20:10] 2026-03-16 09:19:29,676 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-16 05:20:10] 2026-03-16 09:19:29,676 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-16 05:20:10] 2026-03-16 09:19:29,677 | INFO     | fitting pss+swap vs Time
[2026-03-16 05:20:10] 2026-03-16 09:19:29,678 | INFO     | sum of square deviations: 93240818.0
[2026-03-16 05:20:10] 2026-03-16 09:19:29,678 | INFO     | sum of deviations: -225430745.9999998
[2026-03-16 05:20:10] 2026-03-16 09:19:29,678 | INFO     | mean x: 1773650572.0
[2026-03-16 05:20:10] 2026-03-16 09:19:29,678 | INFO     | mean y: 2523836.268656716
[2026-03-16 05:20:10] 2026-03-16 09:19:29,678 | INFO     | intersect: 4290724864.162753
[2026-03-16 05:20:10] 2026-03-16 09:19:29,678 | INFO     | chi2: 0.0067391333437642155
[2026-03-16 05:20:10] 2026-03-16 09:19:29,678 | INFO     | current memory leak: -2.42 B/s (using 67 data points, chi2=0.01)
[2026-03-16 05:20:10] 2026-03-16 09:19:29,678 | INFO     | could have reported an average CPU frequency of 2640 MHz (6 samples)
[2026-03-16 05:20:10] 2026-03-16 09:19:29,679 | INFO     | ..............................
[2026-03-16 05:20:10] 2026-03-16 09:19:29,679 | INFO     | . Timing measurements:
[2026-03-16 05:20:10] 2026-03-16 09:19:29,679 | INFO     | . get job = 0 s
[2026-03-16 05:20:10] 2026-03-16 09:19:29,679 | INFO     | . initial setup = 4 s
[2026-03-16 05:20:10] 2026-03-16 09:19:29,679 | INFO     | . payload setup = 2 s
[2026-03-16 05:20:10] 2026-03-16 09:19:29,679 | INFO     | . stage-in = 0 s
[2026-03-16 05:20:10] 2026-03-16 09:19:29,679 | INFO     | . payload execution = 4512 s
[2026-03-16 05:20:10] 2026-03-16 09:19:29,679 | INFO     | . stage-out = 0 s
[2026-03-16 05:20:10] 2026-03-16 09:19:29,679 | INFO     | . log creation = 0 s
[2026-03-16 05:20:10] 2026-03-16 09:19:29,679 | INFO     | ..............................
[2026-03-16 05:20:10] 2026-03-16 09:19:29,729 | INFO     | 
[2026-03-16 05:20:10] 2026-03-16 09:19:29,730 | INFO     | job summary report
[2026-03-16 05:20:10] 2026-03-16 09:19:29,730 | INFO     | --------------------------------------------------
[2026-03-16 05:20:10] 2026-03-16 09:19:29,730 | INFO     | PanDA job id: 7056594685
[2026-03-16 05:20:10] 2026-03-16 09:19:29,730 | INFO     | task id: 48967102
[2026-03-16 05:20:10] 2026-03-16 09:19:29,730 | INFO     | errors: (none)
[2026-03-16 05:20:10] 2026-03-16 09:19:29,730 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-16 05:20:10] 2026-03-16 09:19:29,731 | INFO     | pilot state: finished 
[2026-03-16 05:20:10] 2026-03-16 09:19:29,731 | INFO     | transexitcode: 0
[2026-03-16 05:20:10] 2026-03-16 09:19:29,731 | INFO     | exeerrorcode: 0
[2026-03-16 05:20:10] 2026-03-16 09:19:29,731 | INFO     | exeerrordiag: 
[2026-03-16 05:20:10] 2026-03-16 09:19:29,731 | INFO     | exitcode: 0
[2026-03-16 05:20:10] 2026-03-16 09:19:29,731 | INFO     | exitmsg: OK
[2026-03-16 05:20:10] 2026-03-16 09:19:29,731 | INFO     | cpuconsumptiontime: 33770 s
[2026-03-16 05:20:10] 2026-03-16 09:19:29,731 | INFO     | nevents: 400
[2026-03-16 05:20:10] 2026-03-16 09:19:29,731 | INFO     | neventsw: 0
[2026-03-16 05:20:10] 2026-03-16 09:19:29,732 | INFO     | pid: 449932
[2026-03-16 05:20:10] 2026-03-16 09:19:29,732 | INFO     | pgrp: 449932
[2026-03-16 05:20:10] 2026-03-16 09:19:29,732 | INFO     | corecount: 8
[2026-03-16 05:20:10] 2026-03-16 09:19:29,732 | INFO     | event service: False
[2026-03-16 05:20:10] 2026-03-16 09:19:29,732 | INFO     | sizes: {0: 2280254, 11: 2280254, 4519: 2306467, 4520: 2315465, 4521: 2315715}
[2026-03-16 05:20:10] 2026-03-16 09:19:29,732 | INFO     | --------------------------------------------------
[2026-03-16 05:20:10] 2026-03-16 09:19:29,732 | INFO     | 
[2026-03-16 05:20:10] 2026-03-16 09:19:29,732 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-03-16 05:20:10] 2026-03-16 09:19:29,745 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-16 05:20:10] 2026-03-16 09:19:29,745 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-16 05:20:10] 2026-03-16 09:19:29,745 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-16 05:20:10] 2026-03-16 09:19:29,746 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-16 05:20:10] 2026-03-16 09:19:29,746 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-16 05:20:10] 2026-03-16 09:19:29,746 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-16 05:20:10] 2026-03-16 09:19:29,746 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-16 05:20:10] 2026-03-16 09:19:29,746 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-16 05:20:10] 2026-03-16 09:19:29,746 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-16 05:20:10] 2026-03-16 09:19:29,746 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-16 05:20:10] 2026-03-16 09:19:29,746 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-16 05:20:10] 2026-03-16 09:19:29,746 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-16 05:20:10] 2026-03-16 09:19:29,746 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-16 05:20:10] 2026-03-16 09:19:29,746 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-16 05:20:10] 2026-03-16 09:19:29,746 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-16 05:20:10] 2026-03-16 09:19:29,746 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-16 05:20:10] 2026-03-16 09:19:29,746 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-16 05:20:10] 2026-03-16 09:19:29,746 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-16 05:20:10] 2026-03-16 09:19:29,746 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-16 05:20:10] 2026-03-16 09:19:29,747 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-16 05:20:10] 2026-03-16 09:19:29,747 | INFO     | job 7056594685 has completed (purged errors)
[2026-03-16 05:20:10] 2026-03-16 09:19:29,747 | INFO     | overall cleanup function is called
[2026-03-16 05:20:10] 2026-03-16 09:19:30,754 | INFO     | --- collectZombieJob: --- 10, [449932]
[2026-03-16 05:20:10] 2026-03-16 09:19:30,754 | INFO     | zombie collector waiting for pid 449932
[2026-03-16 05:20:10] 2026-03-16 09:19:30,754 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-16 05:20:10] 2026-03-16 09:19:30,754 | INFO     | collected zombie processes
[2026-03-16 05:20:10] 2026-03-16 09:19:30,754 | INFO     | will attempt to kill all subprocesses of pid=449932
[2026-03-16 05:20:10] 2026-03-16 09:19:30,899 | INFO     | process IDs to be killed: [449932] (in reverse order)
[2026-03-16 05:20:10] 2026-03-16 09:19:30,936 | WARNING  | found no corresponding commands to process id(s)
[2026-03-16 05:20:10] 2026-03-16 09:19:30,936 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-16 05:20:10] 2026-03-16 09:19:30,942 | INFO     | did not find any defunct processes belonging to 449932
[2026-03-16 05:20:10] 2026-03-16 09:19:30,946 | INFO     | did not find any defunct processes belonging to 449932
[2026-03-16 05:20:10] 2026-03-16 09:19:30,947 | INFO     | ready for new job
[2026-03-16 05:20:10] 2026-03-16 09:19:30,947 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-16 05:20:10] 2026-03-16 09:19:30,948 | INFO     | **************************************
[2026-03-16 05:20:10] 2026-03-16 09:19:30,948 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-16 05:20:10] 2026-03-16 09:19:30,949 | INFO     | **************************************
[2026-03-16 05:20:10] 2026-03-16 09:19:30,949 | INFO     | 
[2026-03-16 05:20:10] 2026-03-16 09:19:30,950 | INFO     | architecture information:
[2026-03-16 05:20:10] 2026-03-16 09:19:30,951 | INFO     | executing command: cat /etc/os-release
[2026-03-16 05:20:10] 2026-03-16 09:19:30,960 | INFO     | cat /etc/os-release:
[2026-03-16 05:20:10] NAME="CentOS Linux"
[2026-03-16 05:20:10] VERSION="7 (Core)"
[2026-03-16 05:20:10] ID="centos"
[2026-03-16 05:20:10] ID_LIKE="rhel fedora"
[2026-03-16 05:20:10] VERSION_ID="7"
[2026-03-16 05:20:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-16 05:20:10] ANSI_COLOR="0;31"
[2026-03-16 05:20:10] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-16 05:20:10] HOME_URL="https://www.centos.org/"
[2026-03-16 05:20:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-16 05:20:10] 
[2026-03-16 05:20:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-16 05:20:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-16 05:20:10] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-16 05:20:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-16 05:20:10] 
[2026-03-16 05:20:10] 2026-03-16 09:19:30,960 | INFO     | **************************************
[2026-03-16 05:20:10] 2026-03-16 09:19:31,463 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-03-16 05:20:10] 2026-03-16 09:19:31,474 | INFO     | sufficient remaining disk space (52565114880 B)
[2026-03-16 05:20:10] 2026-03-16 09:19:31,474 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-16 05:20:10] 2026-03-16 09:19:31,474 | INFO     | current server update state: UPDATING_FINAL
[2026-03-16 05:20:10] 2026-03-16 09:19:31,475 | INFO     | update_server=False
[2026-03-16 05:20:10] 2026-03-16 09:19:31,475 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-16 05:20:10] 2026-03-16 09:19:31,475 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-16 05:20:10] 2026-03-16 09:19:31,475 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-16 05:20:10] 2026-03-16 09:19:31,565 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-16 05:20:10] 2026-03-16 09:19:31,566 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-16 05:20:10] 2026-03-16 09:19:31,566 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-16 05:20:10] 2026-03-16 09:19:31,566 | INFO     | will abort loop
[2026-03-16 05:20:10] 2026-03-16 09:19:31,599 | INFO     | all job control threads have been joined
[2026-03-16 05:20:10] 2026-03-16 09:19:31,650 | INFO     | all payload control threads have been joined
[2026-03-16 05:20:10] 2026-03-16 09:19:31,720 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-16 05:20:10] 2026-03-16 09:19:32,342 | INFO     | all data control threads have been joined
[2026-03-16 05:20:10] 2026-03-16 09:19:32,476 | INFO     | [job] retrieve thread has finished
[2026-03-16 05:20:10] 2026-03-16 09:19:32,481 | INFO     | [job] queue monitor thread has finished
[2026-03-16 05:20:10] 2026-03-16 09:19:32,571 | INFO     | [job] job monitor thread has finished
[2026-03-16 05:20:10] 2026-03-16 09:19:32,604 | INFO     | [job] control thread has finished
[2026-03-16 05:20:10] 2026-03-16 09:19:32,655 | INFO     | [payload] control thread has finished
[2026-03-16 05:20:10] 2026-03-16 09:19:32,945 | INFO     | [payload] failed_post thread has finished
[2026-03-16 05:20:10] 2026-03-16 09:19:32,972 | INFO     | [payload] execute_payloads thread has finished
[2026-03-16 05:20:10] 2026-03-16 09:19:33,348 | INFO     | [data] control thread has finished
[2026-03-16 05:20:10] 2026-03-16 09:19:33,372 | INFO     | [payload] validate_pre thread has finished
[2026-03-16 05:20:10] 2026-03-16 09:19:33,373 | INFO     | [job] validate thread has finished
[2026-03-16 05:20:10] 2026-03-16 09:19:33,562 | INFO     | [job] create_data_payload thread has finished
[2026-03-16 05:20:10] 2026-03-16 09:19:33,712 | INFO     | [payload] validate_post thread has finished
[2026-03-16 05:20:10] 2026-03-16 09:19:33,726 | INFO     | [data] copytool_out thread has finished
[2026-03-16 05:20:10] 2026-03-16 09:19:33,876 | INFO     | [data] copytool_in thread has finished
[2026-03-16 05:20:10] 2026-03-16 09:19:35,481 | INFO     | [data] queue_monitor thread has finished
[2026-03-16 05:20:10] 2026-03-16 09:19:42,476 | INFO     | job.realtimelogging is not enabled
[2026-03-16 05:20:10] 2026-03-16 09:19:43,481 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-16 05:20:10] 2026-03-16 09:20:01,031 | INFO     | PID=434135 has CPU usage=4.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-16 05:20:10] 2026-03-16 09:20:01,032 | INFO     | .. there are 3 such processes running
[2026-03-16 05:20:10] 2026-03-16 09:20:01,032 | INFO     | found 0 job(s) in 20 queues
[2026-03-16 05:20:10] 2026-03-16 09:20:01,032 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-16 05:20:10] 2026-03-16 09:20:01,032 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-16 05:20:10] 2026-03-16 09:20:04,042 | INFO     | [monitor] cgroup control has ended
[2026-03-16 05:20:10] 2026-03-16 09:20:05,400 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140458886858560)>', '<ExcThread(monitor, started 140458449696512)>']
[2026-03-16 05:20:10] 2026-03-16 09:20:06,057 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-16 05:20:10] 2026-03-16 09:20:06,057 | INFO     | [monitor] control thread has ended
[2026-03-16 05:20:10] 2026-03-16 09:20:10,408 | INFO     | all workflow threads have been joined
[2026-03-16 05:20:10] 2026-03-16 09:20:10,408 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-16 05:20:10] 2026-03-16 09:20:10,409 | INFO     | traces error code: 0
[2026-03-16 05:20:10] 2026-03-16 09:20:10,409 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-16 05:20:10] 2026-03-16 09:20:10,517 [wrapper] ==== pilot stdout END ====
[2026-03-16 05:20:10] 2026-03-16 09:20:10,519 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-16 05:20:10] 2026-03-16 09:20:10,521 [wrapper] pilotpid: 434135
[2026-03-16 05:20:10] 2026-03-16 09:20:10,523 [wrapper] Pilot exit status: 0
[2026-03-16 05:20:10] 2026-03-16 09:20:10,529 [wrapper] pandaids: 7056594685
[2026-03-16 05:20:10] 2026-03-16 09:20:10,554 [wrapper] cleanup supervisor_pilot  542404 434136
[2026-03-16 05:20:10] 2026-03-16 09:20:10,556 [wrapper] Test setup, not cleaning
[2026-03-16 05:20:10] 2026-03-16 09:20:10,558 [wrapper] apfmon messages muted
[2026-03-16 05:20:10] 2026-03-16 09:20:10,560 [wrapper] ==== wrapper stdout END ====
[2026-03-16 05:20:10] 2026-03-16 09:20:10,562 [wrapper] ==== wrapper stderr END ====
[2026-03-16 05:20:10]  *** Error codes and diagnostics ***
[2026-03-16 05:20:10]     "exeErrorCode": 0,
[2026-03-16 05:20:10]     "exeErrorDiag": "",
[2026-03-16 05:20:10]     "pilotErrorCode": 0,
[2026-03-16 05:20:10]     "pilotErrorDiag": "",
[2026-03-16 05:20:10]  *** Listing of results directory ***
[2026-03-16 05:20:10] total 409912
[2026-03-16 05:20:10] -rw-r--r--. 1 boincer umatlas    585013 Mar 16 03:59 pilot3.tar.gz
[2026-03-16 05:20:10] -rwx------. 1 boincer umatlas     36322 Mar 16 04:02 runpilot2-wrapper.sh
[2026-03-16 05:20:10] -rw-r--r--. 1 boincer umatlas      5111 Mar 16 04:02 queuedata.json
[2026-03-16 05:20:10] -rw-r--r--. 1 boincer umatlas       100 Mar 16 04:03 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-16 05:20:10] -rwxr-xr-x. 1 boincer umatlas      7986 Mar 16 04:03 run_atlas
[2026-03-16 05:20:10] -rw-r--r--. 1 boincer umatlas       105 Mar 16 04:03 job.xml
[2026-03-16 05:20:10] -rw-r--r--. 2 boincer umatlas 213122400 Mar 16 04:03 EVNT.48967100._000042.pool.root.1
[2026-03-16 05:20:10] -rw-r--r--. 2 boincer umatlas     15845 Mar 16 04:03 start_atlas.sh
[2026-03-16 05:20:10] drwxrwx--x. 2 boincer umatlas      4096 Mar 16 04:03 shared
[2026-03-16 05:20:10] -rw-r--r--. 2 boincer umatlas    597526 Mar 16 04:03 input.tar.gz
[2026-03-16 05:20:10] -rw-r--r--. 1 boincer umatlas         0 Mar 16 04:03 boinc_lockfile
[2026-03-16 05:20:10] -rw-r--r--. 1 boincer umatlas      2578 Mar 16 04:03 pandaJob.out
[2026-03-16 05:20:10] -rw-------. 1 boincer umatlas        57 Mar 16 04:03 setup.sh.local
[2026-03-16 05:20:10] -rw-------. 1 boincer umatlas   1006471 Mar 16 04:03 agis_schedconf.cvmfs.json
[2026-03-16 05:20:10] -rw-------. 1 boincer umatlas   1511579 Mar 16 04:03 agis_ddmendpoints.agis.ALL.json
[2026-03-16 05:20:10] -rw-------. 1 boincer umatlas       442 Mar 16 04:03 workernode_map.json
[2026-03-16 05:20:10] drwx------. 5 boincer umatlas      4096 Mar 16 04:03 pilot3
[2026-03-16 05:20:10] -rw-r--r--. 1 boincer umatlas      6661 Mar 16 05:10 init_data.xml
[2026-03-16 05:20:10] -rw-r--r--. 1 boincer umatlas       529 Mar 16 05:18 boinc_task_state.xml
[2026-03-16 05:20:10] -rw-------. 1 boincer umatlas 200661506 Mar 16 05:18 HITS.48967102._001085.pool.root.1
[2026-03-16 05:20:10] -rw-------. 1 boincer umatlas      1030 Mar 16 05:19 memory_monitor_summary.json
[2026-03-16 05:20:10] -rw-------. 1 boincer umatlas    339217 Mar 16 05:19 log.48967102._001085.job.log.tgz.1
[2026-03-16 05:20:10] -rw-------. 1 boincer umatlas      6372 Mar 16 05:19 heartbeat.json
[2026-03-16 05:20:10] -rw-------. 1 boincer umatlas        95 Mar 16 05:20 pilot_heartbeat.json
[2026-03-16 05:20:10] -rw-r--r--. 1 boincer umatlas        27 Mar 16 05:20 wrapper_checkpoint.txt
[2026-03-16 05:20:10] -rw-r--r--. 1 boincer umatlas      8192 Mar 16 05:20 boinc_mmap_file
[2026-03-16 05:20:10] -rw-------. 1 boincer umatlas      5076 Mar 16 05:20 pilotlog.txt
[2026-03-16 05:20:10] -rw-------. 1 boincer umatlas    672668 Mar 16 05:20 log.48967102._001085.job.log.1
[2026-03-16 05:20:10] -rw-------. 1 boincer umatlas       357 Mar 16 05:20 output.list
[2026-03-16 05:20:10] -rw-r--r--. 1 boincer umatlas       620 Mar 16 05:20 runtime_log
[2026-03-16 05:20:10] -rw-------. 1 boincer umatlas   1034240 Mar 16 05:20 result.tar.gz
[2026-03-16 05:20:10] -rw-------. 1 boincer umatlas       650 Mar 16 05:20 TiUMDmd5HM9n9Rq4apOajLDm4fhM0noT9bVooX4SDmfdsLDm0bVijm.diag
[2026-03-16 05:20:10] -rw-r--r--. 1 boincer umatlas      9341 Mar 16 05:20 runtime_log.err
[2026-03-16 05:20:10] -rw-r--r--. 1 boincer umatlas     21390 Mar 16 05:20 stderr.txt
[2026-03-16 05:20:10] HITS file was successfully produced:
[2026-03-16 05:20:10] -rw-------. 1 boincer umatlas 200661506 Mar 16 05:18 shared/HITS.pool.root.1
[2026-03-16 05:20:10]  *** Contents of shared directory: ***
[2026-03-16 05:20:10] total 405704
[2026-03-16 05:20:10] -rw-r--r--. 2 boincer umatlas 213122400 Mar 16 04:03 ATLAS.root_0
[2026-03-16 05:20:10] -rw-r--r--. 2 boincer umatlas     15845 Mar 16 04:03 start_atlas.sh
[2026-03-16 05:20:10] -rw-r--r--. 2 boincer umatlas    597526 Mar 16 04:03 input.tar.gz
[2026-03-16 05:20:10] -rw-------. 1 boincer umatlas 200661506 Mar 16 05:18 HITS.pool.root.1
[2026-03-16 05:20:10] -rw-------. 1 boincer umatlas   1034240 Mar 16 05:20 result.tar.gz
05:20:12 (428525): run_atlas exited; CPU time 33873.304399
05:20:12 (428525): called boinc_finish(0)

</stderr_txt>
]]>

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