Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
23:58:56 (2970881): wrapper (7.7.26015): starting
23:58:56 (2970881): wrapper: running run_atlas (--nthreads 9)
[2026-03-15 23:58:56] Arguments: --nthreads 9
[2026-03-15 23:58:56] Threads: 9
[2026-03-15 23:58:56] Checking for CVMFS
[2026-03-15 23:58:56] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-15 23:58:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-15 23:58:56] Running cvmfs_config stat atlas.cern.ch
[2026-03-15 23:58:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-15 23:58:56] 2.13.3.0 9435 187806 350892 157338 1 74 29798288 32935936 7662 16776704 0 762763856 99.689 604169672 32311 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-03-15 23:58:56] CVMFS is ok
[2026-03-15 23:58:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-15 23:58:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-15 23:58:56] Further information can be found at the LHC@home message board.
[2026-03-15 23:58:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-15 23:58:56] Checking for apptainer binary...
[2026-03-15 23:58:56] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-15 23:58:56] Running /usr/bin/apptainer --version
[2026-03-15 23:58:56] apptainer version 1.4.5-2.el9
[2026-03-15 23:58:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-15 23:58:56] c-8-17.aglt2.org
[2026-03-15 23:58:56] apptainer works
[2026-03-15 23:58:56] Set ATHENA_PROC_NUMBER=9
[2026-03-15 23:58:56] Set ATHENA_CORE_NUMBER=9
[2026-03-15 23:58:56] Starting ATLAS job with PandaID=7056443687
[2026-03-15 23:58:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-16 02:20:27]  *** The last 200 lines of the pilot log: ***
[2026-03-16 02:20:27] 2026-03-16 06:19:47,853 | INFO     | preparing for final server update for job 7056443687 in state='finished'
[2026-03-16 02:20:27] 2026-03-16 06:19:47,853 | INFO     | reading metadata from: /tmp/boinchome/slots/1/PanDA_Pilot-7056443687/jobReport.json
[2026-03-16 02:20:27] 2026-03-16 06:19:47,884 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/1/workernode_map.json
[2026-03-16 02:20:27] 2026-03-16 06:19:47,884 | INFO     | this job has now completed (state=finished)
[2026-03-16 02:20:27] 2026-03-16 06:19:47,884 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-16 02:20:27] 2026-03-16 06:19:47,885 | INFO     | log transfer has been attempted: DONE
[2026-03-16 02:20:27] 2026-03-16 06:19:47,885 | INFO     | job 7056443687 has finished - writing final server update
[2026-03-16 02:20:27] 2026-03-16 06:19:47,885 | INFO     | total number of processed events: 400 (read)
[2026-03-16 02:20:27] 2026-03-16 06:19:47,900 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-7056443687/memory_monitor_summary.json (trf name=prmon)
[2026-03-16 02:20:27] 2026-03-16 06:19:47,900 | INFO     | extracted standard info from prmon json
[2026-03-16 02:20:27] 2026-03-16 06:19:47,901 | INFO     | extracted standard memory fields from prmon json
[2026-03-16 02:20:27] 2026-03-16 06:19:47,901 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-16 02:20:27] 2026-03-16 06:19:47,905 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-16 02:20:27] 2026-03-16 06:19:47,905 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-16 02:20:27] 2026-03-16 06:19:47,908 | INFO     | fitting pss+swap vs Time
[2026-03-16 02:20:27] 2026-03-16 06:19:47,908 | INFO     | sum of square deviations: 814869388.3840612
[2026-03-16 02:20:27] 2026-03-16 06:19:47,912 | INFO     | sum of deviations: 15719125257.304352
[2026-03-16 02:20:27] 2026-03-16 06:19:47,912 | INFO     | mean x: 1773637742.5289855
[2026-03-16 02:20:27] 2026-03-16 06:19:47,913 | INFO     | mean y: 2539573.1739130435
[2026-03-16 02:20:27] 2026-03-16 06:19:47,913 | INFO     | intersect: -34211574042.240654
[2026-03-16 02:20:27] 2026-03-16 06:19:47,913 | INFO     | chi2: 1.175920780205926
[2026-03-16 02:20:27] 2026-03-16 06:19:47,913 | INFO     | sum of square deviations: 729464355.879699
[2026-03-16 02:20:27] 2026-03-16 06:19:47,918 | INFO     | sum of deviations: 15131301803.27067
[2026-03-16 02:20:27] 2026-03-16 06:19:47,918 | INFO     | mean x: 1773637590.030075
[2026-03-16 02:20:27] 2026-03-16 06:19:47,919 | INFO     | mean y: 2538521.932330827
[2026-03-16 02:20:27] 2026-03-16 06:19:47,919 | INFO     | intersect: -36788081126.65358
[2026-03-16 02:20:27] 2026-03-16 06:19:47,919 | INFO     | chi2: 1.1771372898881352
[2026-03-16 02:20:27] 2026-03-16 06:19:47,919 | INFO     | current chi2=1.1771372898881352 (change=-0.10345166976266687 %)
[2026-03-16 02:20:27] 2026-03-16 06:19:47,919 | INFO     | right removable region: 132
[2026-03-16 02:20:27] 2026-03-16 06:19:47,920 | INFO     | sum of square deviations: 729461915.879699
[2026-03-16 02:20:27] 2026-03-16 06:19:47,920 | INFO     | sum of deviations: -1173630110.759399
[2026-03-16 02:20:27] 2026-03-16 06:19:47,920 | INFO     | mean x: 1773637895.030075
[2026-03-16 02:20:27] 2026-03-16 06:19:47,921 | INFO     | mean y: 2569140.939849624
[2026-03-16 02:20:27] 2026-03-16 06:19:47,921 | INFO     | intersect: 2856172315.933437
[2026-03-16 02:20:27] 2026-03-16 06:19:47,921 | INFO     | chi2: 0.011671063727907572
[2026-03-16 02:20:27] 2026-03-16 06:19:47,921 | INFO     | current chi2=0.011671063727907572 (change=99.0074957493426 %)
[2026-03-16 02:20:27] 2026-03-16 06:19:47,921 | INFO     | sum of square deviations: 650240605.875
[2026-03-16 02:20:27] 2026-03-16 06:19:47,926 | INFO     | sum of deviations: -541509118.3125
[2026-03-16 02:20:27] 2026-03-16 06:19:47,926 | INFO     | mean x: 1773638047.53125
[2026-03-16 02:20:27] 2026-03-16 06:19:47,926 | INFO     | mean y: 2567917.578125
[2026-03-16 02:20:27] 2026-03-16 06:19:47,927 | INFO     | intersect: 1479622974.8084068
[2026-03-16 02:20:27] 2026-03-16 06:19:47,927 | INFO     | chi2: 0.011103950922423656
[2026-03-16 02:20:27] 2026-03-16 06:19:47,927 | INFO     | current chi2=0.011103950922423656 (change=4.859135539872417 %)
[2026-03-16 02:20:27] 2026-03-16 06:19:47,927 | INFO     | left removable region: 20
[2026-03-16 02:20:27] 2026-03-16 06:19:47,927 | INFO     | sum of square deviations: 435597465.8571427
[2026-03-16 02:20:27] 2026-03-16 06:19:47,928 | INFO     | sum of deviations: 1977583160.8928573
[2026-03-16 02:20:27] 2026-03-16 06:19:47,928 | INFO     | mean x: 1773638169.5357144
[2026-03-16 02:20:27] 2026-03-16 06:19:47,928 | INFO     | mean y: 2561829.151785714
[2026-03-16 02:20:27] 2026-03-16 06:19:47,928 | INFO     | intersect: -8049636019.8159
[2026-03-16 02:20:27] 2026-03-16 06:19:47,929 | INFO     | chi2: 0.002101057992855858
[2026-03-16 02:20:27] 2026-03-16 06:19:47,929 | INFO     | current memory leak: 4.54 B/s (using 112 data points, chi2=0.00)
[2026-03-16 02:20:27] 2026-03-16 06:19:47,929 | INFO     | could have reported an average CPU frequency of 2680 MHz (8 samples)
[2026-03-16 02:20:27] 2026-03-16 06:19:47,930 | INFO     | ..............................
[2026-03-16 02:20:27] 2026-03-16 06:19:47,934 | INFO     | . Timing measurements:
[2026-03-16 02:20:27] 2026-03-16 06:19:47,934 | INFO     | . get job = 0 s
[2026-03-16 02:20:27] 2026-03-16 06:19:47,934 | INFO     | . initial setup = 5 s
[2026-03-16 02:20:27] 2026-03-16 06:19:47,934 | INFO     | . payload setup = 3 s
[2026-03-16 02:20:27] 2026-03-16 06:19:47,934 | INFO     | . stage-in = 0 s
[2026-03-16 02:20:27] 2026-03-16 06:19:47,934 | INFO     | . payload execution = 8416 s
[2026-03-16 02:20:27] 2026-03-16 06:19:47,934 | INFO     | . stage-out = 0 s
[2026-03-16 02:20:27] 2026-03-16 06:19:47,934 | INFO     | . log creation = 0 s
[2026-03-16 02:20:27] 2026-03-16 06:19:47,935 | INFO     | ..............................
[2026-03-16 02:20:27] 2026-03-16 06:19:48,099 | INFO     | 
[2026-03-16 02:20:27] 2026-03-16 06:19:48,099 | INFO     | job summary report
[2026-03-16 02:20:27] 2026-03-16 06:19:48,100 | INFO     | --------------------------------------------------
[2026-03-16 02:20:27] 2026-03-16 06:19:48,100 | INFO     | PanDA job id: 7056443687
[2026-03-16 02:20:27] 2026-03-16 06:19:48,100 | INFO     | task id: 48967094
[2026-03-16 02:20:27] 2026-03-16 06:19:48,100 | INFO     | errors: (none)
[2026-03-16 02:20:27] 2026-03-16 06:19:48,100 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-16 02:20:27] 2026-03-16 06:19:48,100 | INFO     | pilot state: finished 
[2026-03-16 02:20:27] 2026-03-16 06:19:48,100 | INFO     | transexitcode: 0
[2026-03-16 02:20:27] 2026-03-16 06:19:48,100 | INFO     | exeerrorcode: 0
[2026-03-16 02:20:27] 2026-03-16 06:19:48,101 | INFO     | exeerrordiag: 
[2026-03-16 02:20:27] 2026-03-16 06:19:48,101 | INFO     | exitcode: 0
[2026-03-16 02:20:27] 2026-03-16 06:19:48,101 | INFO     | exitmsg: OK
[2026-03-16 02:20:27] 2026-03-16 06:19:48,101 | INFO     | cpuconsumptiontime: 56490 s
[2026-03-16 02:20:27] 2026-03-16 06:19:48,101 | INFO     | nevents: 400
[2026-03-16 02:20:27] 2026-03-16 06:19:48,101 | INFO     | neventsw: 0
[2026-03-16 02:20:27] 2026-03-16 06:19:48,101 | INFO     | pid: 2992135
[2026-03-16 02:20:27] 2026-03-16 06:19:48,101 | INFO     | pgrp: 2992135
[2026-03-16 02:20:27] 2026-03-16 06:19:48,102 | INFO     | corecount: 9
[2026-03-16 02:20:27] 2026-03-16 06:19:48,102 | INFO     | event service: False
[2026-03-16 02:20:27] 2026-03-16 06:19:48,102 | INFO     | sizes: {0: 2280230, 11: 2280230, 8423: 2308633, 8426: 2317631, 8428: 2317687, 8430: 2317881}
[2026-03-16 02:20:27] 2026-03-16 06:19:48,102 | INFO     | --------------------------------------------------
[2026-03-16 02:20:27] 2026-03-16 06:19:48,102 | INFO     | 
[2026-03-16 02:20:27] 2026-03-16 06:19:48,102 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-03-16 02:20:27] 2026-03-16 06:19:48,121 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-16 02:20:27] 2026-03-16 06:19:48,121 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-16 02:20:27] 2026-03-16 06:19:48,121 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-16 02:20:27] 2026-03-16 06:19:48,121 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-16 02:20:27] 2026-03-16 06:19:48,122 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-16 02:20:27] 2026-03-16 06:19:48,122 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-16 02:20:27] 2026-03-16 06:19:48,122 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-16 02:20:27] 2026-03-16 06:19:48,122 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-16 02:20:27] 2026-03-16 06:19:48,122 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-16 02:20:27] 2026-03-16 06:19:48,122 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-16 02:20:27] 2026-03-16 06:19:48,122 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-16 02:20:27] 2026-03-16 06:19:48,122 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-16 02:20:27] 2026-03-16 06:19:48,123 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-16 02:20:27] 2026-03-16 06:19:48,123 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-16 02:20:27] 2026-03-16 06:19:48,123 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-16 02:20:27] 2026-03-16 06:19:48,123 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-16 02:20:27] 2026-03-16 06:19:48,123 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-16 02:20:27] 2026-03-16 06:19:48,123 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-16 02:20:27] 2026-03-16 06:19:48,123 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-16 02:20:27] 2026-03-16 06:19:48,123 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-16 02:20:27] 2026-03-16 06:19:48,124 | INFO     | job 7056443687 has completed (purged errors)
[2026-03-16 02:20:27] 2026-03-16 06:19:48,124 | INFO     | overall cleanup function is called
[2026-03-16 02:20:27] 2026-03-16 06:19:49,133 | INFO     | --- collectZombieJob: --- 10, [2992135]
[2026-03-16 02:20:27] 2026-03-16 06:19:49,133 | INFO     | zombie collector waiting for pid 2992135
[2026-03-16 02:20:27] 2026-03-16 06:19:49,133 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-16 02:20:27] 2026-03-16 06:19:49,133 | INFO     | collected zombie processes
[2026-03-16 02:20:27] 2026-03-16 06:19:49,133 | INFO     | will attempt to kill all subprocesses of pid=2992135
[2026-03-16 02:20:27] 2026-03-16 06:19:49,502 | INFO     | process IDs to be killed: [2992135] (in reverse order)
[2026-03-16 02:20:27] 2026-03-16 06:19:49,649 | WARNING  | found no corresponding commands to process id(s)
[2026-03-16 02:20:27] 2026-03-16 06:19:49,650 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-16 02:20:27] 2026-03-16 06:19:49,660 | INFO     | did not find any defunct processes belonging to 2992135
[2026-03-16 02:20:27] 2026-03-16 06:19:49,670 | INFO     | did not find any defunct processes belonging to 2992135
[2026-03-16 02:20:27] 2026-03-16 06:19:49,670 | INFO     | ready for new job
[2026-03-16 02:20:27] 2026-03-16 06:19:49,670 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-16 02:20:27] 2026-03-16 06:19:49,672 | INFO     | **************************************
[2026-03-16 02:20:27] 2026-03-16 06:19:49,673 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-16 02:20:27] 2026-03-16 06:19:49,673 | INFO     | **************************************
[2026-03-16 02:20:27] 2026-03-16 06:19:49,673 | INFO     | 
[2026-03-16 02:20:27] 2026-03-16 06:19:49,675 | INFO     | architecture information:
[2026-03-16 02:20:27] 2026-03-16 06:19:49,675 | INFO     | executing command: cat /etc/os-release
[2026-03-16 02:20:27] 2026-03-16 06:19:49,691 | INFO     | cat /etc/os-release:
[2026-03-16 02:20:27] NAME="CentOS Linux"
[2026-03-16 02:20:27] VERSION="7 (Core)"
[2026-03-16 02:20:27] ID="centos"
[2026-03-16 02:20:27] ID_LIKE="rhel fedora"
[2026-03-16 02:20:27] VERSION_ID="7"
[2026-03-16 02:20:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-16 02:20:27] ANSI_COLOR="0;31"
[2026-03-16 02:20:27] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-16 02:20:27] HOME_URL="https://www.centos.org/"
[2026-03-16 02:20:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-16 02:20:27] 
[2026-03-16 02:20:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-16 02:20:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-16 02:20:27] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-16 02:20:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-16 02:20:27] 
[2026-03-16 02:20:27] 2026-03-16 06:19:49,691 | INFO     | **************************************
[2026-03-16 02:20:27] 2026-03-16 06:19:50,195 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-03-16 02:20:27] 2026-03-16 06:19:50,249 | INFO     | sufficient remaining disk space (74575773696 B)
[2026-03-16 02:20:27] 2026-03-16 06:19:50,250 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-16 02:20:27] 2026-03-16 06:19:50,250 | INFO     | current server update state: UPDATING_FINAL
[2026-03-16 02:20:27] 2026-03-16 06:19:50,250 | INFO     | update_server=False
[2026-03-16 02:20:27] 2026-03-16 06:19:50,250 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-16 02:20:27] 2026-03-16 06:19:50,250 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-16 02:20:27] 2026-03-16 06:19:50,408 | INFO     | all job control threads have been joined
[2026-03-16 02:20:27] 2026-03-16 06:19:50,541 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-16 02:20:27] 2026-03-16 06:19:50,541 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-16 02:20:27] 2026-03-16 06:19:50,542 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-16 02:20:27] 2026-03-16 06:19:50,542 | INFO     | will abort loop
[2026-03-16 02:20:27] 2026-03-16 06:19:51,026 | INFO     | all payload control threads have been joined
[2026-03-16 02:20:27] 2026-03-16 06:19:51,256 | INFO     | [job] retrieve thread has finished
[2026-03-16 02:20:27] 2026-03-16 06:19:51,316 | INFO     | all data control threads have been joined
[2026-03-16 02:20:27] 2026-03-16 06:19:51,415 | INFO     | [job] control thread has finished
[2026-03-16 02:20:27] 2026-03-16 06:19:51,547 | INFO     | [job] job monitor thread has finished
[2026-03-16 02:20:27] 2026-03-16 06:19:51,584 | INFO     | [payload] execute_payloads thread has finished
[2026-03-16 02:20:27] 2026-03-16 06:19:51,689 | INFO     | [job] validate thread has finished
[2026-03-16 02:20:27] 2026-03-16 06:19:52,032 | INFO     | [payload] control thread has finished
[2026-03-16 02:20:27] 2026-03-16 06:19:52,163 | INFO     | [data] copytool_in thread has finished
[2026-03-16 02:20:27] 2026-03-16 06:19:52,179 | INFO     | [payload] failed_post thread has finished
[2026-03-16 02:20:27] 2026-03-16 06:19:52,257 | INFO     | [data] copytool_out thread has finished
[2026-03-16 02:20:27] 2026-03-16 06:19:52,324 | INFO     | [data] control thread has finished
[2026-03-16 02:20:27] 2026-03-16 06:19:52,383 | INFO     | [job] create_data_payload thread has finished
[2026-03-16 02:20:27] 2026-03-16 06:19:52,439 | INFO     | [payload] validate_post thread has finished
[2026-03-16 02:20:27] 2026-03-16 06:19:52,464 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-16 02:20:27] 2026-03-16 06:19:52,464 | INFO     | [payload] validate_pre thread has finished
[2026-03-16 02:20:27] 2026-03-16 06:19:53,115 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-16 02:20:27] 2026-03-16 06:19:54,121 | INFO     | [job] queue monitor thread has finished
[2026-03-16 02:20:27] 2026-03-16 06:19:56,485 | INFO     | [data] queue_monitor thread has finished
[2026-03-16 02:20:27] 2026-03-16 06:20:00,423 | INFO     | job.realtimelogging is not enabled
[2026-03-16 02:20:27] 2026-03-16 06:20:01,442 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-16 02:20:27] 2026-03-16 06:20:20,707 | INFO     | [monitor] cgroup control has ended
[2026-03-16 02:20:27] 2026-03-16 06:20:20,991 | INFO     | PID=2976638 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-16 02:20:27] 2026-03-16 06:20:20,991 | INFO     | .. there are 16 such processes running
[2026-03-16 02:20:27] 2026-03-16 06:20:20,991 | INFO     | found 0 job(s) in 20 queues
[2026-03-16 02:20:27] 2026-03-16 06:20:20,991 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-16 02:20:27] 2026-03-16 06:20:20,991 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-16 02:20:27] 2026-03-16 06:20:21,714 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139656660559680)>', '<ExcThread(monitor, started 139655894791936)>']
[2026-03-16 02:20:27] 2026-03-16 06:20:21,996 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-16 02:20:27] 2026-03-16 06:20:21,996 | INFO     | [monitor] control thread has ended
[2026-03-16 02:20:27] 2026-03-16 06:20:26,740 | INFO     | all workflow threads have been joined
[2026-03-16 02:20:27] 2026-03-16 06:20:26,740 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-16 02:20:27] 2026-03-16 06:20:26,740 | INFO     | traces error code: 0
[2026-03-16 02:20:27] 2026-03-16 06:20:26,741 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-16 02:20:27] 2026-03-16 06:20:26,867 [wrapper] ==== pilot stdout END ====
[2026-03-16 02:20:27] 2026-03-16 06:20:26,869 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-16 02:20:27] 2026-03-16 06:20:26,872 [wrapper] pilotpid: 2976638
[2026-03-16 02:20:27] 2026-03-16 06:20:26,874 [wrapper] Pilot exit status: 0
[2026-03-16 02:20:27] 2026-03-16 06:20:26,886 [wrapper] pandaids: 7056443687
[2026-03-16 02:20:27] 2026-03-16 06:20:26,947 [wrapper] cleanup supervisor_pilot 3269445 2976639
[2026-03-16 02:20:27] 2026-03-16 06:20:26,949 [wrapper] Test setup, not cleaning
[2026-03-16 02:20:27] 2026-03-16 06:20:26,952 [wrapper] apfmon messages muted
[2026-03-16 02:20:27] 2026-03-16 06:20:26,955 [wrapper] ==== wrapper stdout END ====
[2026-03-16 02:20:27] 2026-03-16 06:20:26,957 [wrapper] ==== wrapper stderr END ====
[2026-03-16 02:20:27]  *** Error codes and diagnostics ***
[2026-03-16 02:20:27]     "exeErrorCode": 0,
[2026-03-16 02:20:27]     "exeErrorDiag": "",
[2026-03-16 02:20:27]     "pilotErrorCode": 0,
[2026-03-16 02:20:27]     "pilotErrorDiag": "",
[2026-03-16 02:20:27]  *** Listing of results directory ***
[2026-03-16 02:20:27] total 417240
[2026-03-16 02:20:27] -rw-r--r--. 1 boincer umatlas    602624 Mar 10 12:47 pilot3.tar.gz
[2026-03-16 02:20:27] -rw-r--r--. 1 boincer umatlas      5111 Mar 15 23:57 queuedata.json
[2026-03-16 02:20:27] -rwx------. 1 boincer umatlas     36322 Mar 15 23:57 runpilot2-wrapper.sh
[2026-03-16 02:20:27] -rw-r--r--. 1 boincer umatlas       100 Mar 15 23:58 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-16 02:20:27] -rwxr-xr-x. 1 boincer umatlas      7986 Mar 15 23:58 run_atlas
[2026-03-16 02:20:27] -rw-r--r--. 1 boincer umatlas       105 Mar 15 23:58 job.xml
[2026-03-16 02:20:27] -rw-r--r--. 2 boincer umatlas 219173702 Mar 15 23:58 EVNT.48967092._000418.pool.root.1
[2026-03-16 02:20:27] -rw-r--r--. 2 boincer umatlas     15845 Mar 15 23:58 start_atlas.sh
[2026-03-16 02:20:27] drwxrwx--x. 2 boincer umatlas      4096 Mar 15 23:58 shared
[2026-03-16 02:20:27] -rw-r--r--. 2 boincer umatlas    616312 Mar 15 23:58 input.tar.gz
[2026-03-16 02:20:27] -rw-r--r--. 1 boincer umatlas         0 Mar 15 23:58 boinc_lockfile
[2026-03-16 02:20:27] -rw-r--r--. 1 boincer umatlas      2601 Mar 15 23:58 pandaJob.out
[2026-03-16 02:20:27] -rw-------. 1 boincer umatlas        57 Mar 15 23:58 setup.sh.local
[2026-03-16 02:20:27] -rw-------. 1 boincer umatlas   1006471 Mar 15 23:59 agis_schedconf.cvmfs.json
[2026-03-16 02:20:27] -rw-------. 1 boincer umatlas   1511579 Mar 15 23:59 agis_ddmendpoints.agis.ALL.json
[2026-03-16 02:20:27] -rw-------. 1 boincer umatlas       440 Mar 15 23:59 workernode_map.json
[2026-03-16 02:20:27] drwx------. 7 boincer umatlas      4096 Mar 15 23:59 pilot3
[2026-03-16 02:20:27] -rw-r--r--. 1 boincer umatlas      6658 Mar 16 02:18 init_data.xml
[2026-03-16 02:20:27] -rw-------. 1 boincer umatlas 200945442 Mar 16 02:19 HITS.48967094._010585.pool.root.1
[2026-03-16 02:20:27] -rw-r--r--. 1 boincer umatlas       529 Mar 16 02:19 boinc_task_state.xml
[2026-03-16 02:20:27] -rw-------. 1 boincer umatlas        95 Mar 16 02:19 pilot_heartbeat.json
[2026-03-16 02:20:27] -rw-------. 1 boincer umatlas      1033 Mar 16 02:19 memory_monitor_summary.json
[2026-03-16 02:20:27] -rw-------. 1 boincer umatlas    390633 Mar 16 02:19 log.48967094._010585.job.log.tgz.1
[2026-03-16 02:20:27] -rw-------. 1 boincer umatlas      6372 Mar 16 02:19 heartbeat.json
[2026-03-16 02:20:27] -rw-r--r--. 1 boincer umatlas      8192 Mar 16 02:20 boinc_mmap_file
[2026-03-16 02:20:27] -rw-r--r--. 1 boincer umatlas        27 Mar 16 02:20 wrapper_checkpoint.txt
[2026-03-16 02:20:27] -rw-------. 1 boincer umatlas      5078 Mar 16 02:20 pilotlog.txt
[2026-03-16 02:20:27] -rw-------. 1 boincer umatlas   1186288 Mar 16 02:20 log.48967094._010585.job.log.1
[2026-03-16 02:20:27] -rw-------. 1 boincer umatlas       357 Mar 16 02:20 output.list
[2026-03-16 02:20:27] -rw-r--r--. 1 boincer umatlas       620 Mar 16 02:20 runtime_log
[2026-03-16 02:20:27] -rw-------. 1 boincer umatlas   1597440 Mar 16 02:20 result.tar.gz
[2026-03-16 02:20:27] -rw-r--r--. 1 boincer umatlas      9331 Mar 16 02:20 runtime_log.err
[2026-03-16 02:20:27] -rw-------. 1 boincer umatlas       650 Mar 16 02:20 pO5MDm9FEM9n9Rq4apOajLDm4fhM0noT9bVooX4SDmlZsLDmY6LAam.diag
[2026-03-16 02:20:27] -rw-r--r--. 1 boincer umatlas     21291 Mar 16 02:20 stderr.txt
[2026-03-16 02:20:27] HITS file was successfully produced:
[2026-03-16 02:20:27] -rw-------. 1 boincer umatlas 200945442 Mar 16 02:19 shared/HITS.pool.root.1
[2026-03-16 02:20:27]  *** Contents of shared directory: ***
[2026-03-16 02:20:27] total 412460
[2026-03-16 02:20:27] -rw-r--r--. 2 boincer umatlas 219173702 Mar 15 23:58 ATLAS.root_0
[2026-03-16 02:20:27] -rw-r--r--. 2 boincer umatlas     15845 Mar 15 23:58 start_atlas.sh
[2026-03-16 02:20:27] -rw-r--r--. 2 boincer umatlas    616312 Mar 15 23:58 input.tar.gz
[2026-03-16 02:20:27] -rw-------. 1 boincer umatlas 200945442 Mar 16 02:19 HITS.pool.root.1
[2026-03-16 02:20:27] -rw-------. 1 boincer umatlas   1597440 Mar 16 02:20 result.tar.gz
02:20:28 (2970881): run_atlas exited; CPU time 56811.553951
02:20:28 (2970881): called boinc_finish(0)

</stderr_txt>
]]>

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