Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
23:55:26 (2764178): wrapper (7.7.26015): starting
23:55:26 (2764178): wrapper: running run_atlas (--nthreads 8)
[2026-03-15 23:55:26] Arguments: --nthreads 8
[2026-03-15 23:55:26] Threads: 8
[2026-03-15 23:55:26] Checking for CVMFS
[2026-03-15 23:55:26] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-15 23:55:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-15 23:55:26] Running cvmfs_config stat atlas.cern.ch
[2026-03-15 23:55:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-15 23:55:26] 2.13.3.0 5374 116023 218288 157338 1 51 29479929 39288833 1956 16776704 1 71519947 99.688 72848839 34951 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-15 23:55:26] CVMFS is ok
[2026-03-15 23:55:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-15 23:55:26] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-15 23:55:26] Further information can be found at the LHC@home message board.
[2026-03-15 23:55:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-15 23:55:26] Checking for apptainer binary...
[2026-03-15 23:55:26] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-15 23:55:26] Running /usr/bin/apptainer --version
[2026-03-15 23:55:26] apptainer version 1.4.5-2.el9
[2026-03-15 23:55:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-15 23:55:26] c-210-24.aglt2.org
[2026-03-15 23:55:26] apptainer works
[2026-03-15 23:55:26] Set ATHENA_PROC_NUMBER=8
[2026-03-15 23:55:26] Set ATHENA_CORE_NUMBER=8
[2026-03-15 23:55:26] Starting ATLAS job with PandaID=7056444013
[2026-03-15 23:55:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-16 01:17:59]  *** The last 200 lines of the pilot log: ***
[2026-03-16 01:17:59]  guid=7fe66252-0e30-4fed-9f4f-12c691ed5b94
[2026-03-16 01:17:59]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-16 01:17:59]  is_altstaged=None
[2026-03-16 01:17:59]  is_tar=False
[2026-03-16 01:17:59]  lfn=log.48967094._010852.job.log.tgz.1
[2026-03-16 01:17:59]  mtime=0
[2026-03-16 01:17:59]  protocol_id=None
[2026-03-16 01:17:59]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-16 01:17:59]  replicas=None
[2026-03-16 01:17:59]  scope=mc23_13p6TeV
[2026-03-16 01:17:59]  status=None
[2026-03-16 01:17:59]  status_code=0
[2026-03-16 01:17:59]  storage_token=
[2026-03-16 01:17:59]  surl=/tmp/boinchome/slots/2/PanDA_Pilot-7056444013/log.48967094._010852.job.log.tgz.1
[2026-03-16 01:17:59]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ce/fc/log.48967094._010852.job.log.tgz.1
[2026-03-16 01:17:59]  workdir=None
[2026-03-16 01:17:59] ]
[2026-03-16 01:17:59] 2026-03-16 05:17:24,905 | INFO     | transferring file log.48967094._010852.job.log.tgz.1 from /tmp/boinchome/slots/2/PanDA_Pilot-7056444013/log.48967094._010852.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-03-16 01:17:59] 2026-03-16 05:17:24,905 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/2/PanDA_Pilot-7056444013/log.48967094._010852.job.log.tgz.1 /tmp/boinchome/slots/2/log.48967094._010852.job
[2026-03-16 01:17:59] 2026-03-16 05:17:24,915 | INFO     | adding to output.list: log.48967094._010852.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ce/fc/log.48967094._010852.job.log.tg
[2026-03-16 01:17:59] 2026-03-16 05:17:24,916 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-16 01:17:59] 2026-03-16 05:17:24,916 | INFO     | summary of transferred files:
[2026-03-16 01:17:59] 2026-03-16 05:17:24,916 | INFO     |  -- lfn=log.48967094._010852.job.log.tgz.1, status_code=0, status=transferred
[2026-03-16 01:17:59] 2026-03-16 05:17:24,916 | INFO     | stage-out finished correctly
[2026-03-16 01:17:59] 2026-03-16 05:17:25,671 | INFO     | time since job start (4905s) is within the limit (345600.0s)
[2026-03-16 01:17:59] 2026-03-16 05:17:26,241 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-16 01:17:59] 2026-03-16 05:17:26,270 | INFO     | monitor loop #373: job 0:7056444013 is in state 'finished'
[2026-03-16 01:17:59] 2026-03-16 05:17:26,281 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-16 01:17:59] 2026-03-16 05:17:26,292 | INFO     | job 7056444013 has state=finished
[2026-03-16 01:17:59] 2026-03-16 05:17:26,292 | INFO     | preparing for final server update for job 7056444013 in state='finished'
[2026-03-16 01:17:59] 2026-03-16 05:17:26,292 | INFO     | reading metadata from: /tmp/boinchome/slots/2/PanDA_Pilot-7056444013/jobReport.json
[2026-03-16 01:17:59] 2026-03-16 05:17:26,294 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/2/workernode_map.json
[2026-03-16 01:17:59] 2026-03-16 05:17:26,295 | INFO     | this job has now completed (state=finished)
[2026-03-16 01:17:59] 2026-03-16 05:17:26,295 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-16 01:17:59] 2026-03-16 05:17:26,295 | INFO     | log transfer has been attempted: DONE
[2026-03-16 01:17:59] 2026-03-16 05:17:26,295 | INFO     | job 7056444013 has finished - writing final server update
[2026-03-16 01:17:59] 2026-03-16 05:17:26,296 | INFO     | total number of processed events: 400 (read)
[2026-03-16 01:17:59] 2026-03-16 05:17:26,302 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-7056444013/memory_monitor_summary.json (trf name=prmon)
[2026-03-16 01:17:59] 2026-03-16 05:17:26,303 | INFO     | extracted standard info from prmon json
[2026-03-16 01:17:59] 2026-03-16 05:17:26,303 | INFO     | extracted standard memory fields from prmon json
[2026-03-16 01:17:59] 2026-03-16 05:17:26,303 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-16 01:17:59] 2026-03-16 05:17:26,303 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-16 01:17:59] 2026-03-16 05:17:26,303 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-16 01:17:59] 2026-03-16 05:17:26,305 | INFO     | fitting pss+swap vs Time
[2026-03-16 01:17:59] 2026-03-16 05:17:26,306 | INFO     | sum of square deviations: 120605052.0
[2026-03-16 01:17:59] 2026-03-16 05:17:26,306 | INFO     | sum of deviations: -4841389439.999999
[2026-03-16 01:17:59] 2026-03-16 05:17:26,306 | INFO     | mean x: 1773635862.0
[2026-03-16 01:17:59] 2026-03-16 05:17:26,306 | INFO     | mean y: 2585612.3561643837
[2026-03-16 01:17:59] 2026-03-16 05:17:26,306 | INFO     | intersect: 71200779969.02454
[2026-03-16 01:17:59] 2026-03-16 05:17:26,307 | INFO     | chi2: 0.03265452578951714
[2026-03-16 01:17:59] 2026-03-16 05:17:26,307 | INFO     | current memory leak: -40.14 B/s (using 73 data points, chi2=0.03)
[2026-03-16 01:17:59] 2026-03-16 05:17:26,307 | INFO     | could have reported an average CPU frequency of 2799 MHz (6 samples)
[2026-03-16 01:17:59] 2026-03-16 05:17:26,307 | INFO     | ..............................
[2026-03-16 01:17:59] 2026-03-16 05:17:26,307 | INFO     | . Timing measurements:
[2026-03-16 01:17:59] 2026-03-16 05:17:26,308 | INFO     | . get job = 0 s
[2026-03-16 01:17:59] 2026-03-16 05:17:26,308 | INFO     | . initial setup = 6 s
[2026-03-16 01:17:59] 2026-03-16 05:17:26,308 | INFO     | . payload setup = 5 s
[2026-03-16 01:17:59] 2026-03-16 05:17:26,308 | INFO     | . stage-in = 0 s
[2026-03-16 01:17:59] 2026-03-16 05:17:26,308 | INFO     | . payload execution = 4883 s
[2026-03-16 01:17:59] 2026-03-16 05:17:26,308 | INFO     | . stage-out = 0 s
[2026-03-16 01:17:59] 2026-03-16 05:17:26,308 | INFO     | . log creation = 0 s
[2026-03-16 01:17:59] 2026-03-16 05:17:26,308 | INFO     | ..............................
[2026-03-16 01:17:59] 2026-03-16 05:17:26,750 | INFO     | 
[2026-03-16 01:17:59] 2026-03-16 05:17:26,750 | INFO     | job summary report
[2026-03-16 01:17:59] 2026-03-16 05:17:26,750 | INFO     | --------------------------------------------------
[2026-03-16 01:17:59] 2026-03-16 05:17:26,750 | INFO     | PanDA job id: 7056444013
[2026-03-16 01:17:59] 2026-03-16 05:17:26,750 | INFO     | task id: 48967094
[2026-03-16 01:17:59] 2026-03-16 05:17:26,750 | INFO     | errors: (none)
[2026-03-16 01:17:59] 2026-03-16 05:17:26,750 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-16 01:17:59] 2026-03-16 05:17:26,750 | INFO     | pilot state: finished 
[2026-03-16 01:17:59] 2026-03-16 05:17:26,750 | INFO     | transexitcode: 0
[2026-03-16 01:17:59] 2026-03-16 05:17:26,750 | INFO     | exeerrorcode: 0
[2026-03-16 01:17:59] 2026-03-16 05:17:26,750 | INFO     | exeerrordiag: 
[2026-03-16 01:17:59] 2026-03-16 05:17:26,750 | INFO     | exitcode: 0
[2026-03-16 01:17:59] 2026-03-16 05:17:26,751 | INFO     | exitmsg: OK
[2026-03-16 01:17:59] 2026-03-16 05:17:26,751 | INFO     | cpuconsumptiontime: 36368 s
[2026-03-16 01:17:59] 2026-03-16 05:17:26,751 | INFO     | nevents: 400
[2026-03-16 01:17:59] 2026-03-16 05:17:26,751 | INFO     | neventsw: 0
[2026-03-16 01:17:59] 2026-03-16 05:17:26,751 | INFO     | pid: 2779952
[2026-03-16 01:17:59] 2026-03-16 05:17:26,751 | INFO     | pgrp: 2779952
[2026-03-16 01:17:59] 2026-03-16 05:17:26,751 | INFO     | corecount: 8
[2026-03-16 01:17:59] 2026-03-16 05:17:26,751 | INFO     | event service: False
[2026-03-16 01:17:59] 2026-03-16 05:17:26,751 | INFO     | sizes: {0: 2279791, 1: 2280252, 11: 2280252, 4892: 2306615, 4893: 2315668, 4895: 2315990}
[2026-03-16 01:17:59] 2026-03-16 05:17:26,751 | INFO     | --------------------------------------------------
[2026-03-16 01:17:59] 2026-03-16 05:17:26,751 | INFO     | 
[2026-03-16 01:17:59] 2026-03-16 05:17:26,751 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-03-16 01:17:59] 2026-03-16 05:17:26,763 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-16 01:17:59] 2026-03-16 05:17:26,763 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-16 01:17:59] 2026-03-16 05:17:26,763 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-16 01:17:59] 2026-03-16 05:17:26,763 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-16 01:17:59] 2026-03-16 05:17:26,763 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-16 01:17:59] 2026-03-16 05:17:26,763 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-16 01:17:59] 2026-03-16 05:17:26,763 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-16 01:17:59] 2026-03-16 05:17:26,764 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-16 01:17:59] 2026-03-16 05:17:26,764 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-16 01:17:59] 2026-03-16 05:17:26,764 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-16 01:17:59] 2026-03-16 05:17:26,764 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-16 01:17:59] 2026-03-16 05:17:26,764 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-16 01:17:59] 2026-03-16 05:17:26,764 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-16 01:17:59] 2026-03-16 05:17:26,764 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-16 01:17:59] 2026-03-16 05:17:26,764 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-16 01:17:59] 2026-03-16 05:17:26,764 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-16 01:17:59] 2026-03-16 05:17:26,764 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-16 01:17:59] 2026-03-16 05:17:26,764 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-16 01:17:59] 2026-03-16 05:17:26,764 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-16 01:17:59] 2026-03-16 05:17:26,764 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-16 01:17:59] 2026-03-16 05:17:26,764 | INFO     | job 7056444013 has completed (purged errors)
[2026-03-16 01:17:59] 2026-03-16 05:17:26,764 | INFO     | overall cleanup function is called
[2026-03-16 01:17:59] 2026-03-16 05:17:27,771 | INFO     | --- collectZombieJob: --- 10, [2779952]
[2026-03-16 01:17:59] 2026-03-16 05:17:27,771 | INFO     | zombie collector waiting for pid 2779952
[2026-03-16 01:17:59] 2026-03-16 05:17:27,771 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-16 01:17:59] 2026-03-16 05:17:27,771 | INFO     | collected zombie processes
[2026-03-16 01:17:59] 2026-03-16 05:17:27,772 | INFO     | will attempt to kill all subprocesses of pid=2779952
[2026-03-16 01:17:59] 2026-03-16 05:17:27,882 | INFO     | process IDs to be killed: [2779952] (in reverse order)
[2026-03-16 01:17:59] 2026-03-16 05:17:27,918 | WARNING  | found no corresponding commands to process id(s)
[2026-03-16 01:17:59] 2026-03-16 05:17:27,918 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-16 01:17:59] 2026-03-16 05:17:27,921 | INFO     | did not find any defunct processes belonging to 2779952
[2026-03-16 01:17:59] 2026-03-16 05:17:27,924 | INFO     | did not find any defunct processes belonging to 2779952
[2026-03-16 01:17:59] 2026-03-16 05:17:27,924 | INFO     | ready for new job
[2026-03-16 01:17:59] 2026-03-16 05:17:27,924 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-16 01:17:59] 2026-03-16 05:17:27,925 | INFO     | **************************************
[2026-03-16 01:17:59] 2026-03-16 05:17:27,925 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-16 01:17:59] 2026-03-16 05:17:27,925 | INFO     | **************************************
[2026-03-16 01:17:59] 2026-03-16 05:17:27,925 | INFO     | 
[2026-03-16 01:17:59] 2026-03-16 05:17:27,926 | INFO     | architecture information:
[2026-03-16 01:17:59] 2026-03-16 05:17:27,926 | INFO     | executing command: cat /etc/os-release
[2026-03-16 01:17:59] 2026-03-16 05:17:27,934 | INFO     | cat /etc/os-release:
[2026-03-16 01:17:59] NAME="CentOS Linux"
[2026-03-16 01:17:59] VERSION="7 (Core)"
[2026-03-16 01:17:59] ID="centos"
[2026-03-16 01:17:59] ID_LIKE="rhel fedora"
[2026-03-16 01:17:59] VERSION_ID="7"
[2026-03-16 01:17:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-16 01:17:59] ANSI_COLOR="0;31"
[2026-03-16 01:17:59] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-16 01:17:59] HOME_URL="https://www.centos.org/"
[2026-03-16 01:17:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-16 01:17:59] 
[2026-03-16 01:17:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-16 01:17:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-16 01:17:59] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-16 01:17:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-16 01:17:59] 
[2026-03-16 01:17:59] 2026-03-16 05:17:27,934 | INFO     | **************************************
[2026-03-16 01:17:59] 2026-03-16 05:17:28,437 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-03-16 01:17:59] 2026-03-16 05:17:28,444 | INFO     | sufficient remaining disk space (53147074560 B)
[2026-03-16 01:17:59] 2026-03-16 05:17:28,444 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-16 01:17:59] 2026-03-16 05:17:28,444 | INFO     | current server update state: UPDATING_FINAL
[2026-03-16 01:17:59] 2026-03-16 05:17:28,444 | INFO     | update_server=False
[2026-03-16 01:17:59] 2026-03-16 05:17:28,444 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-16 01:17:59] 2026-03-16 05:17:28,444 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-16 01:17:59] 2026-03-16 05:17:28,444 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-16 01:17:59] 2026-03-16 05:17:28,660 | INFO     | all job control threads have been joined
[2026-03-16 01:17:59] 2026-03-16 05:17:28,794 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-16 01:17:59] 2026-03-16 05:17:28,794 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-16 01:17:59] 2026-03-16 05:17:28,794 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-16 01:17:59] 2026-03-16 05:17:28,794 | INFO     | will abort loop
[2026-03-16 01:17:59] 2026-03-16 05:17:28,866 | INFO     | all data control threads have been joined
[2026-03-16 01:17:59] 2026-03-16 05:17:29,076 | INFO     | all payload control threads have been joined
[2026-03-16 01:17:59] 2026-03-16 05:17:29,449 | INFO     | [job] retrieve thread has finished
[2026-03-16 01:17:59] 2026-03-16 05:17:29,624 | INFO     | [payload] failed_post thread has finished
[2026-03-16 01:17:59] 2026-03-16 05:17:29,665 | INFO     | [job] control thread has finished
[2026-03-16 01:17:59] 2026-03-16 05:17:29,725 | INFO     | [payload] validate_pre thread has finished
[2026-03-16 01:17:59] 2026-03-16 05:17:29,799 | INFO     | [job] job monitor thread has finished
[2026-03-16 01:17:59] 2026-03-16 05:17:29,824 | INFO     | job.realtimelogging is not enabled
[2026-03-16 01:17:59] 2026-03-16 05:17:29,871 | INFO     | [data] control thread has finished
[2026-03-16 01:17:59] 2026-03-16 05:17:29,908 | INFO     | [data] copytool_in thread has finished
[2026-03-16 01:17:59] 2026-03-16 05:17:30,082 | INFO     | [payload] control thread has finished
[2026-03-16 01:17:59] 2026-03-16 05:17:30,255 | INFO     | [payload] validate_post thread has finished
[2026-03-16 01:17:59] 2026-03-16 05:17:30,450 | INFO     | [data] copytool_out thread has finished
[2026-03-16 01:17:59] 2026-03-16 05:17:30,820 | INFO     | [job] validate thread has finished
[2026-03-16 01:17:59] 2026-03-16 05:17:30,829 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-16 01:17:59] 2026-03-16 05:17:30,848 | INFO     | [payload] execute_payloads thread has finished
[2026-03-16 01:17:59] 2026-03-16 05:17:30,849 | INFO     | [job] create_data_payload thread has finished
[2026-03-16 01:17:59] 2026-03-16 05:17:31,390 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-16 01:17:59] 2026-03-16 05:17:32,395 | INFO     | [job] queue monitor thread has finished
[2026-03-16 01:17:59] 2026-03-16 05:17:32,450 | INFO     | [data] queue_monitor thread has finished
[2026-03-16 01:17:59] 2026-03-16 05:17:46,995 | INFO     | [monitor] cgroup control has ended
[2026-03-16 01:17:59] 2026-03-16 05:17:48,962 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140449391208256)>', '<ExcThread(monitor, started 140449020884736)>']
[2026-03-16 01:17:59] 2026-03-16 05:17:53,988 | INFO     | all workflow threads have been joined
[2026-03-16 01:17:59] 2026-03-16 05:17:53,988 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-16 01:17:59] 2026-03-16 05:17:53,988 | INFO     | traces error code: 0
[2026-03-16 01:17:59] 2026-03-16 05:17:53,988 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-16 01:17:59] 2026-03-16 05:17:58,879 | INFO     | PID=2769259 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-16 01:17:59] 2026-03-16 05:17:58,879 | INFO     | .. there are 2 such processes running
[2026-03-16 01:17:59] 2026-03-16 05:17:58,880 | INFO     | found 0 job(s) in 20 queues
[2026-03-16 01:17:59] 2026-03-16 05:17:58,880 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-16 01:17:59] 2026-03-16 05:17:58,880 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-16 01:17:59] 2026-03-16 05:17:58,880 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-16 01:17:59] 2026-03-16 05:17:58,880 | INFO     | [monitor] control thread has ended
[2026-03-16 01:17:59] 2026-03-16 05:17:58,944 [wrapper] ==== pilot stdout END ====
[2026-03-16 01:17:59] 2026-03-16 05:17:58,946 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-16 01:17:59] 2026-03-16 05:17:58,948 [wrapper] pilotpid: 2769259
[2026-03-16 01:17:59] 2026-03-16 05:17:58,949 [wrapper] Pilot exit status: 0
[2026-03-16 01:17:59] 2026-03-16 05:17:58,955 [wrapper] pandaids: 7056444013
[2026-03-16 01:17:59] 2026-03-16 05:17:58,978 [wrapper] cleanup supervisor_pilot 2888667 2769260
[2026-03-16 01:17:59] 2026-03-16 05:17:58,980 [wrapper] Test setup, not cleaning
[2026-03-16 01:17:59] 2026-03-16 05:17:58,982 [wrapper] apfmon messages muted
[2026-03-16 01:17:59] 2026-03-16 05:17:58,983 [wrapper] ==== wrapper stdout END ====
[2026-03-16 01:17:59] 2026-03-16 05:17:58,984 [wrapper] ==== wrapper stderr END ====
[2026-03-16 01:17:59]  *** Error codes and diagnostics ***
[2026-03-16 01:17:59]     "exeErrorCode": 0,
[2026-03-16 01:17:59]     "exeErrorDiag": "",
[2026-03-16 01:17:59]     "pilotErrorCode": 0,
[2026-03-16 01:17:59]     "pilotErrorDiag": "",
[2026-03-16 01:17:59]  *** Listing of results directory ***
[2026-03-16 01:17:59] total 422104
[2026-03-16 01:17:59] -rw-r--r--. 1 boincer umatlas    585013 Mar 15 23:52 pilot3.tar.gz
[2026-03-16 01:17:59] -rw-r--r--. 1 boincer umatlas      5111 Mar 15 23:54 queuedata.json
[2026-03-16 01:17:59] -rwx------. 1 boincer umatlas     36322 Mar 15 23:54 runpilot2-wrapper.sh
[2026-03-16 01:17:59] -rw-r--r--. 1 boincer umatlas       100 Mar 15 23:55 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-16 01:17:59] -rwxr-xr-x. 1 boincer umatlas      7986 Mar 15 23:55 run_atlas
[2026-03-16 01:17:59] -rw-r--r--. 1 boincer umatlas       105 Mar 15 23:55 job.xml
[2026-03-16 01:17:59] -rw-r--r--. 2 boincer umatlas 217249046 Mar 15 23:55 EVNT.48967092._000429.pool.root.1
[2026-03-16 01:17:59] -rw-r--r--. 2 boincer umatlas     15845 Mar 15 23:55 start_atlas.sh
[2026-03-16 01:17:59] drwxrwx--x. 2 boincer umatlas      4096 Mar 15 23:55 shared
[2026-03-16 01:17:59] -rw-r--r--. 2 boincer umatlas    597538 Mar 15 23:55 input.tar.gz
[2026-03-16 01:17:59] -rw-r--r--. 1 boincer umatlas         0 Mar 15 23:55 boinc_lockfile
[2026-03-16 01:17:59] -rw-r--r--. 1 boincer umatlas      2598 Mar 15 23:55 pandaJob.out
[2026-03-16 01:17:59] -rw-------. 1 boincer umatlas        57 Mar 15 23:55 setup.sh.local
[2026-03-16 01:17:59] -rw-------. 1 boincer umatlas   1006471 Mar 15 23:55 agis_schedconf.cvmfs.json
[2026-03-16 01:17:59] -rw-------. 1 boincer umatlas   1511579 Mar 15 23:55 agis_ddmendpoints.agis.ALL.json
[2026-03-16 01:17:59] -rw-------. 1 boincer umatlas       435 Mar 15 23:55 workernode_map.json
[2026-03-16 01:17:59] drwx------. 5 boincer umatlas      4096 Mar 15 23:55 pilot3
[2026-03-16 01:17:59] -rw-r--r--. 1 boincer umatlas      6660 Mar 16 01:13 init_data.xml
[2026-03-16 01:17:59] -rw-------. 1 boincer umatlas 208959850 Mar 16 01:16 HITS.48967094._010852.pool.root.1
[2026-03-16 01:17:59] -rw-r--r--. 1 boincer umatlas       529 Mar 16 01:16 boinc_task_state.xml
[2026-03-16 01:17:59] -rw-------. 1 boincer umatlas      1035 Mar 16 01:17 memory_monitor_summary.json
[2026-03-16 01:17:59] -rw-------. 1 boincer umatlas    314626 Mar 16 01:17 log.48967094._010852.job.log.tgz.1
[2026-03-16 01:17:59] -rw-------. 1 boincer umatlas      6373 Mar 16 01:17 heartbeat.json
[2026-03-16 01:17:59] -rw-r--r--. 1 boincer umatlas      8192 Mar 16 01:17 boinc_mmap_file
[2026-03-16 01:17:59] -rw-r--r--. 1 boincer umatlas        27 Mar 16 01:17 wrapper_checkpoint.txt
[2026-03-16 01:17:59] -rw-------. 1 boincer umatlas       822 Mar 16 01:17 pilotlog.txt
[2026-03-16 01:17:59] -rw-------. 1 boincer umatlas        95 Mar 16 01:17 pilot_heartbeat.json
[2026-03-16 01:17:59] -rw-------. 1 boincer umatlas    728941 Mar 16 01:17 log.48967094._010852.job.log.1
[2026-03-16 01:17:59] -rw-------. 1 boincer umatlas       357 Mar 16 01:17 output.list
[2026-03-16 01:17:59] -rw-r--r--. 1 boincer umatlas       620 Mar 16 01:17 runtime_log
[2026-03-16 01:17:59] -rw-------. 1 boincer umatlas   1064960 Mar 16 01:17 result.tar.gz
[2026-03-16 01:17:59] -rw-r--r--. 1 boincer umatlas      9341 Mar 16 01:17 runtime_log.err
[2026-03-16 01:17:59] -rw-------. 1 boincer umatlas       652 Mar 16 01:17 dRhMDmBDEM9n9Rq4apOajLDm4fhM0noT9bVooX4SDmwYsLDmWgrvOo.diag
[2026-03-16 01:17:59] -rw-r--r--. 1 boincer umatlas     21341 Mar 16 01:17 stderr.txt
[2026-03-16 01:17:59] HITS file was successfully produced:
[2026-03-16 01:17:59] -rw-------. 1 boincer umatlas 208959850 Mar 16 01:16 shared/HITS.pool.root.1
[2026-03-16 01:17:59]  *** Contents of shared directory: ***
[2026-03-16 01:17:59] total 417872
[2026-03-16 01:17:59] -rw-r--r--. 2 boincer umatlas 217249046 Mar 15 23:55 ATLAS.root_0
[2026-03-16 01:17:59] -rw-r--r--. 2 boincer umatlas     15845 Mar 15 23:55 start_atlas.sh
[2026-03-16 01:17:59] -rw-r--r--. 2 boincer umatlas    597538 Mar 15 23:55 input.tar.gz
[2026-03-16 01:17:59] -rw-------. 1 boincer umatlas 208959850 Mar 16 01:16 HITS.pool.root.1
[2026-03-16 01:17:59] -rw-------. 1 boincer umatlas   1064960 Mar 16 01:17 result.tar.gz
01:18:00 (2764178): run_atlas exited; CPU time 36434.733602
01:18:00 (2764178): called boinc_finish(0)

</stderr_txt>
]]>

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