Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
21:38:57 (2153861): wrapper (7.7.26015): starting
21:38:57 (2153861): wrapper: running run_atlas (--nthreads 8)
[2026-03-15 21:38:57] Arguments: --nthreads 8
[2026-03-15 21:38:57] Threads: 8
[2026-03-15 21:38:57] Checking for CVMFS
[2026-03-15 21:38:57] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-15 21:38:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-15 21:38:57] Running cvmfs_config stat atlas.cern.ch
[2026-03-15 21:38:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-15 21:38:58] 2.13.3.0 12161 187800 363144 157335 0 120 28035778 40960000 10316 16776704 0 502639050 99.583 572481043 37158 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-03-15 21:38:58] CVMFS is ok
[2026-03-15 21:38:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-15 21:38:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-15 21:38:58] Further information can be found at the LHC@home message board.
[2026-03-15 21:38:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-15 21:38:58] Checking for apptainer binary...
[2026-03-15 21:38:58] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-15 21:38:58] Running /usr/bin/apptainer --version
[2026-03-15 21:38:58] apptainer version 1.4.5-2.el9
[2026-03-15 21:38:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-15 21:38:58] c6-5-7-1.aglt2.org
[2026-03-15 21:38:58] apptainer works
[2026-03-15 21:38:58] Set ATHENA_PROC_NUMBER=8
[2026-03-15 21:38:58] Set ATHENA_CORE_NUMBER=8
[2026-03-15 21:38:58] Starting ATLAS job with PandaID=7049375717
[2026-03-15 21:38:58] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-15 23:25:26]  *** The last 200 lines of the pilot log: ***
[2026-03-15 23:25:26] 2026-03-16 03:24:56,889 | INFO     | job 7049375717 has state=finished
[2026-03-15 23:25:26] 2026-03-16 03:24:56,889 | INFO     | preparing for final server update for job 7049375717 in state='finished'
[2026-03-15 23:25:26] 2026-03-16 03:24:56,889 | INFO     | reading metadata from: /tmp/boinchome/slots/3/PanDA_Pilot-7049375717/jobReport.json
[2026-03-15 23:25:26] 2026-03-16 03:24:56,892 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/3/workernode_map.json
[2026-03-15 23:25:26] 2026-03-16 03:24:56,892 | INFO     | this job has now completed (state=finished)
[2026-03-15 23:25:26] 2026-03-16 03:24:56,892 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-15 23:25:26] 2026-03-16 03:24:56,892 | INFO     | log transfer has been attempted: DONE
[2026-03-15 23:25:26] 2026-03-16 03:24:56,892 | INFO     | job 7049375717 has finished - writing final server update
[2026-03-15 23:25:26] 2026-03-16 03:24:56,892 | INFO     | total number of processed events: 400 (read)
[2026-03-15 23:25:26] 2026-03-16 03:24:56,901 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-7049375717/memory_monitor_summary.json (trf name=prmon)
[2026-03-15 23:25:26] 2026-03-16 03:24:56,902 | INFO     | extracted standard info from prmon json
[2026-03-15 23:25:26] 2026-03-16 03:24:56,902 | INFO     | extracted standard memory fields from prmon json
[2026-03-15 23:25:26] 2026-03-16 03:24:56,902 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-15 23:25:26] 2026-03-16 03:24:56,903 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-15 23:25:26] 2026-03-16 03:24:56,903 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-15 23:25:26] 2026-03-16 03:24:56,904 | INFO     | fitting pss+swap vs Time
[2026-03-15 23:25:26] 2026-03-16 03:24:56,905 | INFO     | sum of square deviations: 348769330.0
[2026-03-15 23:25:26] 2026-03-16 03:24:56,905 | INFO     | sum of deviations: 9026428884.0
[2026-03-15 23:25:26] 2026-03-16 03:24:56,905 | INFO     | mean x: 1773628311.5
[2026-03-15 23:25:26] 2026-03-16 03:24:56,905 | INFO     | mean y: 2498954.4423076925
[2026-03-15 23:25:26] 2026-03-16 03:24:56,906 | INFO     | intersect: -45900418657.04535
[2026-03-15 23:25:26] 2026-03-16 03:24:56,906 | INFO     | chi2: 1.2749604978160773
[2026-03-15 23:25:26] 2026-03-16 03:24:56,906 | INFO     | sum of square deviations: 300842850.0
[2026-03-15 23:25:26] 2026-03-16 03:24:56,906 | INFO     | sum of deviations: 8729952841.000002
[2026-03-15 23:25:26] 2026-03-16 03:24:56,906 | INFO     | mean x: 1773628159.0
[2026-03-15 23:25:26] 2026-03-16 03:24:56,907 | INFO     | mean y: 2498010.383838384
[2026-03-15 23:25:26] 2026-03-16 03:24:56,907 | INFO     | intersect: -51465204099.00535
[2026-03-15 23:25:26] 2026-03-16 03:24:56,907 | INFO     | chi2: 1.2773999725872747
[2026-03-15 23:25:26] 2026-03-16 03:24:56,907 | INFO     | current chi2=1.2773999725872747 (change=-0.19133728263549996 %)
[2026-03-15 23:25:26] 2026-03-16 03:24:56,907 | INFO     | right removable region: 98
[2026-03-15 23:25:26] 2026-03-16 03:24:56,907 | INFO     | sum of square deviations: 300842850.0
[2026-03-15 23:25:26] 2026-03-16 03:24:56,908 | INFO     | sum of deviations: -4521851005.0
[2026-03-15 23:25:26] 2026-03-16 03:24:56,908 | INFO     | mean x: 1773628464.0
[2026-03-15 23:25:26] 2026-03-16 03:24:56,908 | INFO     | mean y: 2540999.5454545454
[2026-03-15 23:25:26] 2026-03-16 03:24:56,908 | INFO     | intersect: 26661255515.895126
[2026-03-15 23:25:26] 2026-03-16 03:24:56,908 | INFO     | chi2: 0.01285144931681582
[2026-03-15 23:25:26] 2026-03-16 03:24:56,908 | INFO     | current chi2=0.01285144931681582 (change=98.99201196124667 %)
[2026-03-15 23:25:26] 2026-03-16 03:24:56,908 | INFO     | sum of square deviations: 257521107.5
[2026-03-15 23:25:26] 2026-03-16 03:24:56,909 | INFO     | sum of deviations: -4303314906.0
[2026-03-15 23:25:26] 2026-03-16 03:24:56,909 | INFO     | mean x: 1773628616.5
[2026-03-15 23:25:26] 2026-03-16 03:24:56,909 | INFO     | mean y: 2540206.914893617
[2026-03-15 23:25:26] 2026-03-16 03:24:56,909 | INFO     | intersect: 29640819325.812393
[2026-03-15 23:25:26] 2026-03-16 03:24:56,909 | INFO     | chi2: 0.011897266131364418
[2026-03-15 23:25:26] 2026-03-16 03:24:56,909 | INFO     | current chi2=0.011897266131364418 (change=7.42471266803251 %)
[2026-03-15 23:25:26] 2026-03-16 03:24:56,909 | INFO     | left removable region: 20
[2026-03-15 23:25:26] 2026-03-16 03:24:56,909 | INFO     | sum of square deviations: 147126479.5
[2026-03-15 23:25:26] 2026-03-16 03:24:56,910 | INFO     | sum of deviations: -2521418103.0
[2026-03-15 23:25:26] 2026-03-16 03:24:56,910 | INFO     | mean x: 1773628738.5
[2026-03-15 23:25:26] 2026-03-16 03:24:56,910 | INFO     | mean y: 2535046.846153846
[2026-03-15 23:25:26] 2026-03-16 03:24:56,910 | INFO     | intersect: 30398556377.968628
[2026-03-15 23:25:26] 2026-03-16 03:24:56,910 | INFO     | chi2: 0.011044108682175173
[2026-03-15 23:25:26] 2026-03-16 03:24:56,910 | INFO     | current memory leak: -17.14 B/s (using 78 data points, chi2=0.01)
[2026-03-15 23:25:26] 2026-03-16 03:24:56,910 | INFO     | could have reported an average CPU frequency of 3280 MHz (7 samples)
[2026-03-15 23:25:26] 2026-03-16 03:24:56,911 | INFO     | ..............................
[2026-03-15 23:25:26] 2026-03-16 03:24:56,911 | INFO     | . Timing measurements:
[2026-03-15 23:25:26] 2026-03-16 03:24:56,911 | INFO     | . get job = 0 s
[2026-03-15 23:25:26] 2026-03-16 03:24:56,911 | INFO     | . initial setup = 5 s
[2026-03-15 23:25:26] 2026-03-16 03:24:56,911 | INFO     | . payload setup = 4 s
[2026-03-15 23:25:26] 2026-03-16 03:24:56,911 | INFO     | . stage-in = 0 s
[2026-03-15 23:25:26] 2026-03-16 03:24:56,911 | INFO     | . payload execution = 6326 s
[2026-03-15 23:25:26] 2026-03-16 03:24:56,911 | INFO     | . stage-out = 0 s
[2026-03-15 23:25:26] 2026-03-16 03:24:56,911 | INFO     | . log creation = 0 s
[2026-03-15 23:25:26] 2026-03-16 03:24:56,911 | INFO     | ..............................
[2026-03-15 23:25:26] 2026-03-16 03:24:56,991 | INFO     | 
[2026-03-15 23:25:26] 2026-03-16 03:24:56,991 | INFO     | job summary report
[2026-03-15 23:25:26] 2026-03-16 03:24:56,991 | INFO     | --------------------------------------------------
[2026-03-15 23:25:26] 2026-03-16 03:24:56,991 | INFO     | PanDA job id: 7049375717
[2026-03-15 23:25:26] 2026-03-16 03:24:56,991 | INFO     | task id: 48967085
[2026-03-15 23:25:26] 2026-03-16 03:24:56,992 | INFO     | errors: (none)
[2026-03-15 23:25:26] 2026-03-16 03:24:56,992 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-15 23:25:26] 2026-03-16 03:24:56,992 | INFO     | pilot state: finished 
[2026-03-15 23:25:26] 2026-03-16 03:24:56,992 | INFO     | transexitcode: 0
[2026-03-15 23:25:26] 2026-03-16 03:24:56,992 | INFO     | exeerrorcode: 0
[2026-03-15 23:25:26] 2026-03-16 03:24:56,992 | INFO     | exeerrordiag: 
[2026-03-15 23:25:26] 2026-03-16 03:24:56,992 | INFO     | exitcode: 0
[2026-03-15 23:25:26] 2026-03-16 03:24:56,992 | INFO     | exitmsg: OK
[2026-03-15 23:25:26] 2026-03-16 03:24:56,992 | INFO     | cpuconsumptiontime: 46788 s
[2026-03-15 23:25:26] 2026-03-16 03:24:56,992 | INFO     | nevents: 400
[2026-03-15 23:25:26] 2026-03-16 03:24:56,992 | INFO     | neventsw: 0
[2026-03-15 23:25:26] 2026-03-16 03:24:56,992 | INFO     | pid: 2183596
[2026-03-15 23:25:26] 2026-03-16 03:24:56,992 | INFO     | pgrp: 2183596
[2026-03-15 23:25:26] 2026-03-16 03:24:56,992 | INFO     | corecount: 8
[2026-03-15 23:25:26] 2026-03-16 03:24:56,992 | INFO     | event service: False
[2026-03-15 23:25:26] 2026-03-16 03:24:56,993 | INFO     | sizes: {0: 2280238, 11: 2280238, 6334: 2307139, 6335: 2316331}
[2026-03-15 23:25:26] 2026-03-16 03:24:56,993 | INFO     | --------------------------------------------------
[2026-03-15 23:25:26] 2026-03-16 03:24:56,993 | INFO     | 
[2026-03-15 23:25:26] 2026-03-16 03:24:56,993 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2026-03-15 23:25:26] 2026-03-16 03:24:57,007 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-15 23:25:26] 2026-03-16 03:24:57,008 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-15 23:25:26] 2026-03-16 03:24:57,008 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-15 23:25:26] 2026-03-16 03:24:57,008 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-15 23:25:26] 2026-03-16 03:24:57,008 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-15 23:25:26] 2026-03-16 03:24:57,008 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-15 23:25:26] 2026-03-16 03:24:57,008 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-15 23:25:26] 2026-03-16 03:24:57,008 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-15 23:25:26] 2026-03-16 03:24:57,008 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-15 23:25:26] 2026-03-16 03:24:57,008 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-15 23:25:26] 2026-03-16 03:24:57,008 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-15 23:25:26] 2026-03-16 03:24:57,008 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-15 23:25:26] 2026-03-16 03:24:57,008 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-15 23:25:26] 2026-03-16 03:24:57,008 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-15 23:25:26] 2026-03-16 03:24:57,008 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-15 23:25:26] 2026-03-16 03:24:57,009 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-15 23:25:26] 2026-03-16 03:24:57,009 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-15 23:25:26] 2026-03-16 03:24:57,009 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-15 23:25:26] 2026-03-16 03:24:57,009 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-15 23:25:26] 2026-03-16 03:24:57,009 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-15 23:25:26] 2026-03-16 03:24:57,009 | INFO     | job 7049375717 has completed (purged errors)
[2026-03-15 23:25:26] 2026-03-16 03:24:57,009 | INFO     | overall cleanup function is called
[2026-03-15 23:25:26] 2026-03-16 03:24:58,018 | INFO     | --- collectZombieJob: --- 10, [2183596]
[2026-03-15 23:25:26] 2026-03-16 03:24:58,018 | INFO     | zombie collector waiting for pid 2183596
[2026-03-15 23:25:26] 2026-03-16 03:24:58,020 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-15 23:25:26] 2026-03-16 03:24:58,020 | INFO     | collected zombie processes
[2026-03-15 23:25:26] 2026-03-16 03:24:58,020 | INFO     | will attempt to kill all subprocesses of pid=2183596
[2026-03-15 23:25:26] 2026-03-16 03:24:58,244 | INFO     | PID=2163587 has CPU usage=11.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-03-15 23:25:26] 2026-03-16 03:24:58,244 | INFO     | .. there are 18 such processes running
[2026-03-15 23:25:26] 2026-03-16 03:24:58,407 | INFO     | process IDs to be killed: [2183596] (in reverse order)
[2026-03-15 23:25:26] 2026-03-16 03:24:58,493 | WARNING  | found no corresponding commands to process id(s)
[2026-03-15 23:25:26] 2026-03-16 03:24:58,493 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-15 23:25:26] 2026-03-16 03:24:58,503 | INFO     | did not find any defunct processes belonging to 2183596
[2026-03-15 23:25:26] 2026-03-16 03:24:58,512 | INFO     | did not find any defunct processes belonging to 2183596
[2026-03-15 23:25:26] 2026-03-16 03:24:58,513 | INFO     | ready for new job
[2026-03-15 23:25:26] 2026-03-16 03:24:58,513 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-15 23:25:26] 2026-03-16 03:24:58,515 | INFO     | **************************************
[2026-03-15 23:25:26] 2026-03-16 03:24:58,515 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-15 23:25:26] 2026-03-16 03:24:58,515 | INFO     | **************************************
[2026-03-15 23:25:26] 2026-03-16 03:24:58,515 | INFO     | 
[2026-03-15 23:25:26] 2026-03-16 03:24:58,518 | INFO     | architecture information:
[2026-03-15 23:25:26] 2026-03-16 03:24:58,518 | INFO     | executing command: cat /etc/os-release
[2026-03-15 23:25:26] 2026-03-16 03:24:58,531 | INFO     | cat /etc/os-release:
[2026-03-15 23:25:26] NAME="CentOS Linux"
[2026-03-15 23:25:26] VERSION="7 (Core)"
[2026-03-15 23:25:26] ID="centos"
[2026-03-15 23:25:26] ID_LIKE="rhel fedora"
[2026-03-15 23:25:26] VERSION_ID="7"
[2026-03-15 23:25:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-15 23:25:26] ANSI_COLOR="0;31"
[2026-03-15 23:25:26] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-15 23:25:26] HOME_URL="https://www.centos.org/"
[2026-03-15 23:25:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-15 23:25:26] 
[2026-03-15 23:25:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-15 23:25:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-15 23:25:26] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-15 23:25:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-15 23:25:26] 
[2026-03-15 23:25:26] 2026-03-16 03:24:58,532 | INFO     | **************************************
[2026-03-15 23:25:26] 2026-03-16 03:24:59,035 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2026-03-15 23:25:26] 2026-03-16 03:24:59,052 | INFO     | sufficient remaining disk space (71497154560 B)
[2026-03-15 23:25:26] 2026-03-16 03:24:59,052 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-15 23:25:26] 2026-03-16 03:24:59,053 | INFO     | current server update state: UPDATING_FINAL
[2026-03-15 23:25:26] 2026-03-16 03:24:59,053 | INFO     | update_server=False
[2026-03-15 23:25:26] 2026-03-16 03:24:59,053 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-15 23:25:26] 2026-03-16 03:24:59,053 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-15 23:25:26] 2026-03-16 03:24:59,053 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-03-15 23:25:26] 2026-03-16 03:24:59,054 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-15 23:25:26] 2026-03-16 03:24:59,054 | INFO     | found 0 job(s) in 20 queues
[2026-03-15 23:25:26] 2026-03-16 03:24:59,054 | INFO     | aborting loop
[2026-03-15 23:25:26] 2026-03-16 03:24:59,055 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-15 23:25:26] 2026-03-16 03:24:59,055 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-15 23:25:26] 2026-03-16 03:24:59,283 | INFO     | job.realtimelogging is not enabled
[2026-03-15 23:25:26] 2026-03-16 03:24:59,406 | INFO     | all job control threads have been joined
[2026-03-15 23:25:26] 2026-03-16 03:24:59,467 | INFO     | all payload control threads have been joined
[2026-03-15 23:25:26] 2026-03-16 03:24:59,820 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-15 23:25:26] 2026-03-16 03:25:00,044 | INFO     | all data control threads have been joined
[2026-03-15 23:25:26] 2026-03-16 03:25:00,058 | INFO     | [job] retrieve thread has finished
[2026-03-15 23:25:26] 2026-03-16 03:25:00,059 | INFO     | [job] job monitor thread has finished
[2026-03-15 23:25:26] 2026-03-16 03:25:00,268 | INFO     | [payload] validate_post thread has finished
[2026-03-15 23:25:26] 2026-03-16 03:25:00,288 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-15 23:25:26] 2026-03-16 03:25:00,380 | INFO     | [job] create_data_payload thread has finished
[2026-03-15 23:25:26] 2026-03-16 03:25:00,410 | INFO     | [job] control thread has finished
[2026-03-15 23:25:26] 2026-03-16 03:25:00,472 | INFO     | [payload] control thread has finished
[2026-03-15 23:25:26] 2026-03-16 03:25:00,501 | INFO     | [payload] validate_pre thread has finished
[2026-03-15 23:25:26] 2026-03-16 03:25:00,630 | INFO     | [data] copytool_in thread has finished
[2026-03-15 23:25:26] 2026-03-16 03:25:01,049 | INFO     | [data] control thread has finished
[2026-03-15 23:25:26] 2026-03-16 03:25:01,389 | INFO     | [payload] execute_payloads thread has finished
[2026-03-15 23:25:26] 2026-03-16 03:25:01,433 | INFO     | [job] validate thread has finished
[2026-03-15 23:25:26] 2026-03-16 03:25:01,527 | INFO     | [payload] failed_post thread has finished
[2026-03-15 23:25:26] 2026-03-16 03:25:01,825 | INFO     | [data] copytool_out thread has finished
[2026-03-15 23:25:26] 2026-03-16 03:25:02,002 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-15 23:25:26] 2026-03-16 03:25:03,007 | INFO     | [job] queue monitor thread has finished
[2026-03-15 23:25:26] 2026-03-16 03:25:03,061 | INFO     | [data] queue_monitor thread has finished
[2026-03-15 23:25:26] 2026-03-16 03:25:20,995 | INFO     | [monitor] cgroup control has ended
[2026-03-15 23:25:26] 2026-03-16 03:25:21,197 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139665371952960)>', '<ExcThread(monitor, started 139664736376576)>']
[2026-03-15 23:25:26] 2026-03-16 03:25:22,174 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-15 23:25:26] 2026-03-16 03:25:22,174 | INFO     | [monitor] control thread has ended
[2026-03-15 23:25:26] 2026-03-16 03:25:26,222 | INFO     | all workflow threads have been joined
[2026-03-15 23:25:26] 2026-03-16 03:25:26,222 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-15 23:25:26] 2026-03-16 03:25:26,222 | INFO     | traces error code: 0
[2026-03-15 23:25:26] 2026-03-16 03:25:26,223 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-15 23:25:26] 2026-03-16 03:25:26,368 [wrapper] ==== pilot stdout END ====
[2026-03-15 23:25:26] 2026-03-16 03:25:26,370 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-15 23:25:26] 2026-03-16 03:25:26,372 [wrapper] pilotpid: 2163587
[2026-03-15 23:25:26] 2026-03-16 03:25:26,375 [wrapper] Pilot exit status: 0
[2026-03-15 23:25:26] 2026-03-16 03:25:26,385 [wrapper] pandaids: 7049375717
[2026-03-15 23:25:26] 2026-03-16 03:25:26,437 [wrapper] cleanup supervisor_pilot 2419507 2163588
[2026-03-15 23:25:26] 2026-03-16 03:25:26,440 [wrapper] Test setup, not cleaning
[2026-03-15 23:25:26] 2026-03-16 03:25:26,443 [wrapper] apfmon messages muted
[2026-03-15 23:25:26] 2026-03-16 03:25:26,445 [wrapper] ==== wrapper stdout END ====
[2026-03-15 23:25:26] 2026-03-16 03:25:26,447 [wrapper] ==== wrapper stderr END ====
[2026-03-15 23:25:26]  *** Error codes and diagnostics ***
[2026-03-15 23:25:26]     "exeErrorCode": 0,
[2026-03-15 23:25:26]     "exeErrorDiag": "",
[2026-03-15 23:25:26]     "pilotErrorCode": 0,
[2026-03-15 23:25:26]     "pilotErrorDiag": "",
[2026-03-15 23:25:26]  *** Listing of results directory ***
[2026-03-15 23:25:26] total 410452
[2026-03-15 23:25:26] -rw-r--r--. 1 boincer umatlas    585013 Mar 10 22:01 pilot3.tar.gz
[2026-03-15 23:25:26] -rw-r--r--. 1 boincer umatlas      5111 Mar 10 22:04 queuedata.json
[2026-03-15 23:25:26] -rwx------. 1 boincer umatlas     36322 Mar 10 22:05 runpilot2-wrapper.sh
[2026-03-15 23:25:26] -rw-r--r--. 1 boincer umatlas       100 Mar 15 21:38 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-15 23:25:26] -rwxr-xr-x. 1 boincer umatlas      7986 Mar 15 21:38 run_atlas
[2026-03-15 23:25:26] -rw-r--r--. 1 boincer umatlas       105 Mar 15 21:38 job.xml
[2026-03-15 23:25:26] -rw-r--r--. 2 boincer umatlas 211780975 Mar 15 21:38 EVNT.48967083._000199.pool.root.1
[2026-03-15 23:25:26] -rw-r--r--. 2 boincer umatlas     15845 Mar 15 21:38 start_atlas.sh
[2026-03-15 23:25:26] drwxrwx--x. 2 boincer umatlas      4096 Mar 15 21:38 shared
[2026-03-15 23:25:26] -rw-r--r--. 2 boincer umatlas    597519 Mar 15 21:38 input.tar.gz
[2026-03-15 23:25:26] -rw-r--r--. 1 boincer umatlas         0 Mar 15 21:38 boinc_lockfile
[2026-03-15 23:25:26] -rw-r--r--. 1 boincer umatlas      2561 Mar 15 21:38 pandaJob.out
[2026-03-15 23:25:26] -rw-------. 1 boincer umatlas        57 Mar 15 21:38 setup.sh.local
[2026-03-15 23:25:26] -rw-------. 1 boincer umatlas   1006471 Mar 15 21:39 agis_schedconf.cvmfs.json
[2026-03-15 23:25:26] -rw-------. 1 boincer umatlas   1511579 Mar 15 21:39 agis_ddmendpoints.agis.ALL.json
[2026-03-15 23:25:26] -rw-------. 1 boincer umatlas       441 Mar 15 21:39 workernode_map.json
[2026-03-15 23:25:26] drwx------. 5 boincer umatlas      4096 Mar 15 21:39 pilot3
[2026-03-15 23:25:26] -rw-r--r--. 1 boincer umatlas      6843 Mar 15 23:20 init_data.xml
[2026-03-15 23:25:26] -rw-------. 1 boincer umatlas        95 Mar 15 23:24 pilot_heartbeat.json
[2026-03-15 23:25:26] -rw-r--r--. 1 boincer umatlas       529 Mar 15 23:24 boinc_task_state.xml
[2026-03-15 23:25:26] -rw-------. 1 boincer umatlas 202072133 Mar 15 23:24 HITS.48967085._004955.pool.root.1
[2026-03-15 23:25:26] -rw-------. 1 boincer umatlas      1037 Mar 15 23:24 memory_monitor_summary.json
[2026-03-15 23:25:26] -rw-------. 1 boincer umatlas    340700 Mar 15 23:24 log.48967085._004955.job.log.tgz.1
[2026-03-15 23:25:26] -rw-------. 1 boincer umatlas      6381 Mar 15 23:24 heartbeat.json
[2026-03-15 23:25:26] -rw-r--r--. 1 boincer umatlas      8192 Mar 15 23:25 boinc_mmap_file
[2026-03-15 23:25:26] -rw-r--r--. 1 boincer umatlas        27 Mar 15 23:25 wrapper_checkpoint.txt
[2026-03-15 23:25:26] -rw-------. 1 boincer umatlas      4620 Mar 15 23:25 pilotlog.txt
[2026-03-15 23:25:26] -rw-------. 1 boincer umatlas    910822 Mar 15 23:25 log.48967085._004955.job.log.1
[2026-03-15 23:25:26] -rw-------. 1 boincer umatlas       357 Mar 15 23:25 output.list
[2026-03-15 23:25:26] -rw-r--r--. 1 boincer umatlas       620 Mar 15 23:25 runtime_log
[2026-03-15 23:25:26] -rw-------. 1 boincer umatlas   1269760 Mar 15 23:25 result.tar.gz
[2026-03-15 23:25:26] -rw-------. 1 boincer umatlas       652 Mar 15 23:25 yCFMDmz7NK9n9Rq4apOajLDm4fhM0noT9bVooX4SDmlAfLDmMdIhIo.diag
[2026-03-15 23:25:26] -rw-r--r--. 1 boincer umatlas      9341 Mar 15 23:25 runtime_log.err
[2026-03-15 23:25:26] -rw-r--r--. 1 boincer umatlas     21211 Mar 15 23:25 stderr.txt
[2026-03-15 23:25:26] HITS file was successfully produced:
[2026-03-15 23:25:26] -rw-------. 1 boincer umatlas 202072133 Mar 15 23:24 shared/HITS.pool.root.1
[2026-03-15 23:25:26]  *** Contents of shared directory: ***
[2026-03-15 23:25:26] total 406008
[2026-03-15 23:25:26] -rw-r--r--. 2 boincer umatlas 211780975 Mar 15 21:38 ATLAS.root_0
[2026-03-15 23:25:26] -rw-r--r--. 2 boincer umatlas     15845 Mar 15 21:38 start_atlas.sh
[2026-03-15 23:25:26] -rw-r--r--. 2 boincer umatlas    597519 Mar 15 21:38 input.tar.gz
[2026-03-15 23:25:26] -rw-------. 1 boincer umatlas 202072133 Mar 15 23:24 HITS.pool.root.1
[2026-03-15 23:25:26] -rw-------. 1 boincer umatlas   1269760 Mar 15 23:25 result.tar.gz
23:25:27 (2153861): run_atlas exited; CPU time 46988.580094
23:25:27 (2153861): called boinc_finish(0)

</stderr_txt>
]]>

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