Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
21:38:39 (3728149): wrapper (7.7.26015): starting
21:38:39 (3728149): wrapper: running run_atlas (--nthreads 10)
[2026-03-15 21:38:39] Arguments: --nthreads 10
[2026-03-15 21:38:39] Threads: 10
[2026-03-15 21:38:39] Checking for CVMFS
[2026-03-15 21:38:39] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-15 21:38:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-15 21:38:39] Running cvmfs_config stat atlas.cern.ch
[2026-03-15 21:38:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-15 21:38:39] 2.13.3.0 9278 187755 340932 157335 3 14 25896859 32935936 11162 16776704 0 798857554 99.718 593236421 32538 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-03-15 21:38:39] CVMFS is ok
[2026-03-15 21:38:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-15 21:38:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-15 21:38:39] Further information can be found at the LHC@home message board.
[2026-03-15 21:38:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-15 21:38:39] Checking for apptainer binary...
[2026-03-15 21:38:39] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-15 21:38:39] Running /usr/bin/apptainer --version
[2026-03-15 21:38:39] apptainer version 1.4.5-2.el9
[2026-03-15 21:38:39] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-15 21:38:39] c-4-40.aglt2.org
[2026-03-15 21:38:39] apptainer works
[2026-03-15 21:38:39] Set ATHENA_PROC_NUMBER=10
[2026-03-15 21:38:39] Set ATHENA_CORE_NUMBER=10
[2026-03-15 21:38:39] Starting ATLAS job with PandaID=7049327538
[2026-03-15 21:38:39] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-15 23:05:06]  *** The last 200 lines of the pilot log: ***
[2026-03-15 23:05:06]  protocol_id=None
[2026-03-15 23:05:06]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-15 23:05:06]  replicas=None
[2026-03-15 23:05:06]  scope=mc23_13p6TeV
[2026-03-15 23:05:06]  status=None
[2026-03-15 23:05:06]  status_code=0
[2026-03-15 23:05:06]  storage_token=
[2026-03-15 23:05:06]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-7049327538/log.48967011._008841.job.log.tgz.1
[2026-03-15 23:05:06]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/4c/28/log.48967011._008841.job.log.tgz.1
[2026-03-15 23:05:06]  workdir=None
[2026-03-15 23:05:06] ]
[2026-03-15 23:05:06] 2026-03-16 03:04:29,375 | INFO     | transferring file log.48967011._008841.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-7049327538/log.48967011._008841.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-03-15 23:05:06] 2026-03-16 03:04:29,376 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-7049327538/log.48967011._008841.job.log.tgz.1 /tmp/boinchome/slots/0/log.48967011._008841.job
[2026-03-15 23:05:06] 2026-03-16 03:04:29,387 | INFO     | adding to output.list: log.48967011._008841.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/4c/28/log.48967011._008841.job.log.tg
[2026-03-15 23:05:06] 2026-03-16 03:04:29,387 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-15 23:05:06] 2026-03-16 03:04:29,387 | INFO     | summary of transferred files:
[2026-03-15 23:05:06] 2026-03-16 03:04:29,388 | INFO     |  -- lfn=log.48967011._008841.job.log.tgz.1, status_code=0, status=transferred
[2026-03-15 23:05:06] 2026-03-16 03:04:29,388 | INFO     | stage-out finished correctly
[2026-03-15 23:05:06] 2026-03-16 03:04:30,678 | INFO     | time since job start (5138s) is within the limit (345600.0s)
[2026-03-15 23:05:06] 2026-03-16 03:04:31,953 | INFO     | PID=3731862 has CPU usage=6.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-15 23:05:06] 2026-03-16 03:04:31,953 | INFO     | .. there are 18 such processes running
[2026-03-15 23:05:06] 2026-03-16 03:04:32,163 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-15 23:05:06] 2026-03-16 03:04:32,954 | INFO     | time since job start (5140s) is within the limit (345600.0s)
[2026-03-15 23:05:06] 2026-03-16 03:04:33,115 | INFO     | job 7049327538 has state=finished
[2026-03-15 23:05:06] 2026-03-16 03:04:33,115 | INFO     | preparing for final server update for job 7049327538 in state='finished'
[2026-03-15 23:05:06] 2026-03-16 03:04:34,218 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-03-15 23:05:06] 2026-03-16 03:04:34,218 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-7049327538/jobReport.json
[2026-03-15 23:05:06] 2026-03-16 03:04:34,221 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-03-15 23:05:06] 2026-03-16 03:04:34,222 | INFO     | this job has now completed (state=finished)
[2026-03-15 23:05:06] 2026-03-16 03:04:34,222 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-15 23:05:06] 2026-03-16 03:04:34,222 | INFO     | log transfer has been attempted: DONE
[2026-03-15 23:05:06] 2026-03-16 03:04:34,222 | INFO     | job 7049327538 has finished - writing final server update
[2026-03-15 23:05:06] 2026-03-16 03:04:34,223 | INFO     | total number of processed events: 400 (read)
[2026-03-15 23:05:06] 2026-03-16 03:04:34,230 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7049327538/memory_monitor_summary.json (trf name=prmon)
[2026-03-15 23:05:06] 2026-03-16 03:04:34,231 | INFO     | extracted standard info from prmon json
[2026-03-15 23:05:06] 2026-03-16 03:04:34,231 | INFO     | extracted standard memory fields from prmon json
[2026-03-15 23:05:06] 2026-03-16 03:04:34,231 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-15 23:05:06] 2026-03-16 03:04:34,231 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-15 23:05:06] 2026-03-16 03:04:34,231 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-15 23:05:06] 2026-03-16 03:04:34,234 | INFO     | fitting pss+swap vs Time
[2026-03-15 23:05:06] 2026-03-16 03:04:34,234 | INFO     | sum of square deviations: 141539398.0
[2026-03-15 23:05:06] 2026-03-16 03:04:34,234 | INFO     | sum of deviations: -16797810706.0
[2026-03-15 23:05:06] 2026-03-16 03:04:34,235 | INFO     | mean x: 1773627775.0
[2026-03-15 23:05:06] 2026-03-16 03:04:34,235 | INFO     | mean y: 2807832.5714285714
[2026-03-15 23:05:06] 2026-03-16 03:04:34,235 | INFO     | intersect: 210495886426.51855
[2026-03-15 23:05:06] 2026-03-16 03:04:34,235 | INFO     | chi2: 0.12181058727873322
[2026-03-15 23:05:06] 2026-03-16 03:04:34,235 | INFO     | current memory leak: -118.68 B/s (using 77 data points, chi2=0.12)
[2026-03-15 23:05:06] 2026-03-16 03:04:34,236 | INFO     | could have reported an average CPU frequency of 2679 MHz (6 samples)
[2026-03-15 23:05:06] 2026-03-16 03:04:34,236 | INFO     | ..............................
[2026-03-15 23:05:06] 2026-03-16 03:04:34,236 | INFO     | . Timing measurements:
[2026-03-15 23:05:06] 2026-03-16 03:04:34,236 | INFO     | . get job = 0 s
[2026-03-15 23:05:06] 2026-03-16 03:04:34,236 | INFO     | . initial setup = 5 s
[2026-03-15 23:05:06] 2026-03-16 03:04:34,237 | INFO     | . payload setup = 4 s
[2026-03-15 23:05:06] 2026-03-16 03:04:34,237 | INFO     | . stage-in = 0 s
[2026-03-15 23:05:06] 2026-03-16 03:04:34,237 | INFO     | . payload execution = 5117 s
[2026-03-15 23:05:06] 2026-03-16 03:04:34,237 | INFO     | . stage-out = 0 s
[2026-03-15 23:05:06] 2026-03-16 03:04:34,237 | INFO     | . log creation = 0 s
[2026-03-15 23:05:06] 2026-03-16 03:04:34,237 | INFO     | ..............................
[2026-03-15 23:05:06] 2026-03-16 03:04:34,297 | INFO     | 
[2026-03-15 23:05:06] 2026-03-16 03:04:34,297 | INFO     | job summary report
[2026-03-15 23:05:06] 2026-03-16 03:04:34,297 | INFO     | --------------------------------------------------
[2026-03-15 23:05:06] 2026-03-16 03:04:34,298 | INFO     | PanDA job id: 7049327538
[2026-03-15 23:05:06] 2026-03-16 03:04:34,298 | INFO     | task id: 48967011
[2026-03-15 23:05:06] 2026-03-16 03:04:34,298 | INFO     | errors: (none)
[2026-03-15 23:05:06] 2026-03-16 03:04:34,298 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-15 23:05:06] 2026-03-16 03:04:34,298 | INFO     | pilot state: finished 
[2026-03-15 23:05:06] 2026-03-16 03:04:34,298 | INFO     | transexitcode: 0
[2026-03-15 23:05:06] 2026-03-16 03:04:34,298 | INFO     | exeerrorcode: 0
[2026-03-15 23:05:06] 2026-03-16 03:04:34,298 | INFO     | exeerrordiag: 
[2026-03-15 23:05:06] 2026-03-16 03:04:34,299 | INFO     | exitcode: 0
[2026-03-15 23:05:06] 2026-03-16 03:04:34,299 | INFO     | exitmsg: OK
[2026-03-15 23:05:06] 2026-03-16 03:04:34,299 | INFO     | cpuconsumptiontime: 47442 s
[2026-03-15 23:05:06] 2026-03-16 03:04:34,299 | INFO     | nevents: 400
[2026-03-15 23:05:06] 2026-03-16 03:04:34,299 | INFO     | neventsw: 0
[2026-03-15 23:05:06] 2026-03-16 03:04:34,299 | INFO     | pid: 3736327
[2026-03-15 23:05:06] 2026-03-16 03:04:34,299 | INFO     | pgrp: 3736327
[2026-03-15 23:05:06] 2026-03-16 03:04:34,299 | INFO     | corecount: 10
[2026-03-15 23:05:06] 2026-03-16 03:04:34,299 | INFO     | event service: False
[2026-03-15 23:05:06] 2026-03-16 03:04:34,300 | INFO     | sizes: {0: 2279805, 1: 2280266, 11: 2280266, 5126: 2315651, 5129: 2315651, 5131: 2315845}
[2026-03-15 23:05:06] 2026-03-16 03:04:34,300 | INFO     | --------------------------------------------------
[2026-03-15 23:05:06] 2026-03-16 03:04:34,300 | INFO     | 
[2026-03-15 23:05:06] 2026-03-16 03:04:34,300 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-03-15 23:05:06] 2026-03-16 03:04:34,313 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-15 23:05:06] 2026-03-16 03:04:34,313 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-15 23:05:06] 2026-03-16 03:04:34,313 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-15 23:05:06] 2026-03-16 03:04:34,313 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-15 23:05:06] 2026-03-16 03:04:34,314 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-15 23:05:06] 2026-03-16 03:04:34,314 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-15 23:05:06] 2026-03-16 03:04:34,314 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-15 23:05:06] 2026-03-16 03:04:34,314 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-15 23:05:06] 2026-03-16 03:04:34,314 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-15 23:05:06] 2026-03-16 03:04:34,314 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-15 23:05:06] 2026-03-16 03:04:34,314 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-15 23:05:06] 2026-03-16 03:04:34,314 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-15 23:05:06] 2026-03-16 03:04:34,314 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-15 23:05:06] 2026-03-16 03:04:34,315 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-15 23:05:06] 2026-03-16 03:04:34,315 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-15 23:05:06] 2026-03-16 03:04:34,315 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-15 23:05:06] 2026-03-16 03:04:34,315 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-15 23:05:06] 2026-03-16 03:04:34,315 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-15 23:05:06] 2026-03-16 03:04:34,315 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-15 23:05:06] 2026-03-16 03:04:34,315 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-15 23:05:06] 2026-03-16 03:04:34,315 | INFO     | job 7049327538 has completed (purged errors)
[2026-03-15 23:05:06] 2026-03-16 03:04:34,316 | INFO     | overall cleanup function is called
[2026-03-15 23:05:06] 2026-03-16 03:04:35,077 | WARNING  | process 3736327 can no longer be monitored (due to stat problems) - aborting
[2026-03-15 23:05:06] 2026-03-16 03:04:35,268 | INFO     | using path: /tmp/boinchome/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-15 23:05:06] 2026-03-16 03:04:35,324 | INFO     | --- collectZombieJob: --- 10, [3736327]
[2026-03-15 23:05:06] 2026-03-16 03:04:35,324 | INFO     | zombie collector waiting for pid 3736327
[2026-03-15 23:05:06] 2026-03-16 03:04:35,324 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-15 23:05:06] 2026-03-16 03:04:35,324 | INFO     | collected zombie processes
[2026-03-15 23:05:06] 2026-03-16 03:04:35,325 | INFO     | will attempt to kill all subprocesses of pid=3736327
[2026-03-15 23:05:06] 2026-03-16 03:04:35,625 | INFO     | number of running child processes to parent process 3736327: 1
[2026-03-15 23:05:06] 2026-03-16 03:04:35,625 | INFO     | maximum number of monitored processes: 6
[2026-03-15 23:05:06] 2026-03-16 03:04:35,625 | INFO     | aborting job monitoring since job object (job id=7049327538) has expired
[2026-03-15 23:05:06] 2026-03-16 03:04:35,698 | INFO     | process IDs to be killed: [3736327] (in reverse order)
[2026-03-15 23:05:06] 2026-03-16 03:04:35,752 | WARNING  | found no corresponding commands to process id(s)
[2026-03-15 23:05:06] 2026-03-16 03:04:35,752 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-15 23:05:06] 2026-03-16 03:04:35,761 | INFO     | did not find any defunct processes belonging to 3736327
[2026-03-15 23:05:06] 2026-03-16 03:04:35,769 | INFO     | did not find any defunct processes belonging to 3736327
[2026-03-15 23:05:06] 2026-03-16 03:04:35,769 | INFO     | ready for new job
[2026-03-15 23:05:06] 2026-03-16 03:04:35,769 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-15 23:05:06] 2026-03-16 03:04:35,771 | INFO     | **************************************
[2026-03-15 23:05:06] 2026-03-16 03:04:35,771 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-15 23:05:06] 2026-03-16 03:04:35,771 | INFO     | **************************************
[2026-03-15 23:05:06] 2026-03-16 03:04:35,771 | INFO     | 
[2026-03-15 23:05:06] 2026-03-16 03:04:35,773 | INFO     | architecture information:
[2026-03-15 23:05:06] 2026-03-16 03:04:35,773 | INFO     | executing command: cat /etc/os-release
[2026-03-15 23:05:06] 2026-03-16 03:04:35,783 | INFO     | cat /etc/os-release:
[2026-03-15 23:05:06] NAME="CentOS Linux"
[2026-03-15 23:05:06] VERSION="7 (Core)"
[2026-03-15 23:05:06] ID="centos"
[2026-03-15 23:05:06] ID_LIKE="rhel fedora"
[2026-03-15 23:05:06] VERSION_ID="7"
[2026-03-15 23:05:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-15 23:05:06] ANSI_COLOR="0;31"
[2026-03-15 23:05:06] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-15 23:05:06] HOME_URL="https://www.centos.org/"
[2026-03-15 23:05:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-15 23:05:06] 
[2026-03-15 23:05:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-15 23:05:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-15 23:05:06] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-15 23:05:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-15 23:05:06] 
[2026-03-15 23:05:06] 2026-03-16 03:04:35,783 | INFO     | **************************************
[2026-03-15 23:05:06] 2026-03-16 03:04:36,286 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-03-15 23:05:06] 2026-03-16 03:04:36,298 | INFO     | sufficient remaining disk space (76503056384 B)
[2026-03-15 23:05:06] 2026-03-16 03:04:36,298 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-15 23:05:06] 2026-03-16 03:04:36,299 | INFO     | current server update state: UPDATING_FINAL
[2026-03-15 23:05:06] 2026-03-16 03:04:36,299 | INFO     | update_server=False
[2026-03-15 23:05:06] 2026-03-16 03:04:36,299 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-15 23:05:06] 2026-03-16 03:04:36,299 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-15 23:05:06] 2026-03-16 03:04:36,299 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-15 23:05:06] 2026-03-16 03:04:36,300 | INFO     | will abort loop
[2026-03-15 23:05:06] 2026-03-16 03:04:36,507 | INFO     | all payload control threads have been joined
[2026-03-15 23:05:06] 2026-03-16 03:04:36,566 | INFO     | all data control threads have been joined
[2026-03-15 23:05:06] 2026-03-16 03:04:37,303 | INFO     | [job] queue monitor thread has finished
[2026-03-15 23:05:06] 2026-03-16 03:04:37,304 | INFO     | [job] retrieve thread has finished
[2026-03-15 23:05:06] 2026-03-16 03:04:37,305 | INFO     | [job] job monitor thread has finished
[2026-03-15 23:05:06] 2026-03-16 03:04:37,345 | INFO     | [payload] execute_payloads thread has finished
[2026-03-15 23:05:06] 2026-03-16 03:04:37,452 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-15 23:05:06] 2026-03-16 03:04:37,512 | INFO     | [payload] control thread has finished
[2026-03-15 23:05:06] 2026-03-16 03:04:37,572 | INFO     | [data] control thread has finished
[2026-03-15 23:05:06] 2026-03-16 03:04:37,668 | INFO     | all job control threads have been joined
[2026-03-15 23:05:06] 2026-03-16 03:04:37,848 | INFO     | [job] validate thread has finished
[2026-03-15 23:05:06] 2026-03-16 03:04:37,883 | INFO     | [payload] validate_post thread has finished
[2026-03-15 23:05:06] 2026-03-16 03:04:37,950 | INFO     | [job] create_data_payload thread has finished
[2026-03-15 23:05:06] 2026-03-16 03:04:38,232 | INFO     | [payload] validate_pre thread has finished
[2026-03-15 23:05:06] 2026-03-16 03:04:38,240 | INFO     | [payload] failed_post thread has finished
[2026-03-15 23:05:06] 2026-03-16 03:04:38,260 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-15 23:05:06] 2026-03-16 03:04:38,506 | INFO     | [data] copytool_in thread has finished
[2026-03-15 23:05:06] 2026-03-16 03:04:38,671 | INFO     | [job] control thread has finished
[2026-03-15 23:05:06] 2026-03-16 03:04:39,457 | INFO     | [data] copytool_out thread has finished
[2026-03-15 23:05:06] 2026-03-16 03:04:42,266 | INFO     | [data] queue_monitor thread has finished
[2026-03-15 23:05:06] 2026-03-16 03:04:46,983 | INFO     | job.realtimelogging is not enabled
[2026-03-15 23:05:06] 2026-03-16 03:04:47,988 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-15 23:05:06] 2026-03-16 03:04:59,877 | INFO     | [monitor] cgroup control has ended
[2026-03-15 23:05:06] 2026-03-16 03:05:00,203 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140652084909888)>', '<ExcThread(monitor, started 140651312178944)>']
[2026-03-15 23:05:06] 2026-03-16 03:05:05,028 | INFO     | 5148s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2026-03-15 23:05:06] 2026-03-16 03:05:05,226 | INFO     | all workflow threads have been joined
[2026-03-15 23:05:06] 2026-03-16 03:05:05,226 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-15 23:05:06] 2026-03-16 03:05:05,226 | INFO     | traces error code: 0
[2026-03-15 23:05:06] 2026-03-16 03:05:05,227 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-15 23:05:06] 2026-03-16 03:05:06,322 | INFO     | PID=3731862 has CPU usage=4.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-15 23:05:06] 2026-03-16 03:05:06,322 | INFO     | .. there are 18 such processes running
[2026-03-15 23:05:06] 2026-03-16 03:05:06,322 | INFO     | found 0 job(s) in 20 queues
[2026-03-15 23:05:06] 2026-03-16 03:05:06,322 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-15 23:05:06] 2026-03-16 03:05:06,323 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-15 23:05:06] 2026-03-16 03:05:06,323 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-15 23:05:06] 2026-03-16 03:05:06,323 | INFO     | [monitor] control thread has ended
[2026-03-15 23:05:06] 2026-03-16 03:05:06,407 [wrapper] ==== pilot stdout END ====
[2026-03-15 23:05:06] 2026-03-16 03:05:06,409 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-15 23:05:06] 2026-03-16 03:05:06,410 [wrapper] pilotpid: 3731862
[2026-03-15 23:05:06] 2026-03-16 03:05:06,412 [wrapper] Pilot exit status: 0
[2026-03-15 23:05:06] 2026-03-16 03:05:06,420 [wrapper] pandaids: 7049327538
[2026-03-15 23:05:06] 2026-03-16 03:05:06,454 [wrapper] cleanup supervisor_pilot 3871713 3731863
[2026-03-15 23:05:06] 2026-03-16 03:05:06,456 [wrapper] Test setup, not cleaning
[2026-03-15 23:05:06] 2026-03-16 03:05:06,457 [wrapper] apfmon messages muted
[2026-03-15 23:05:06] 2026-03-16 03:05:06,459 [wrapper] ==== wrapper stdout END ====
[2026-03-15 23:05:06] 2026-03-16 03:05:06,461 [wrapper] ==== wrapper stderr END ====
[2026-03-15 23:05:06]  *** Error codes and diagnostics ***
[2026-03-15 23:05:06]     "exeErrorCode": 0,
[2026-03-15 23:05:06]     "exeErrorDiag": "",
[2026-03-15 23:05:06]     "pilotErrorCode": 0,
[2026-03-15 23:05:06]     "pilotErrorDiag": "",
[2026-03-15 23:05:06]  *** Listing of results directory ***
[2026-03-15 23:05:06] total 418640
[2026-03-15 23:05:06] -rw-r--r--. 1 boincer umatlas      5111 Mar 10 22:01 queuedata.json
[2026-03-15 23:05:06] -rw-r--r--. 1 boincer umatlas    585013 Mar 10 22:01 pilot3.tar.gz
[2026-03-15 23:05:06] -rwx------. 1 boincer umatlas     36322 Mar 10 22:01 runpilot2-wrapper.sh
[2026-03-15 23:05:06] -rw-r--r--. 1 boincer umatlas       100 Mar 15 21:38 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-15 23:05:06] -rwxr-xr-x. 1 boincer umatlas      7986 Mar 15 21:38 run_atlas
[2026-03-15 23:05:06] -rw-r--r--. 1 boincer umatlas       105 Mar 15 21:38 job.xml
[2026-03-15 23:05:06] -rw-r--r--. 2 boincer umatlas 217386571 Mar 15 21:38 EVNT.48967008._000349.pool.root.1
[2026-03-15 23:05:06] -rw-r--r--. 2 boincer umatlas     15845 Mar 15 21:38 start_atlas.sh
[2026-03-15 23:05:06] drwxrwx--x. 2 boincer umatlas      4096 Mar 15 21:38 shared
[2026-03-15 23:05:06] -rw-r--r--. 2 boincer umatlas    597526 Mar 15 21:38 input.tar.gz
[2026-03-15 23:05:06] -rw-r--r--. 1 boincer umatlas         0 Mar 15 21:38 boinc_lockfile
[2026-03-15 23:05:06] -rw-r--r--. 1 boincer umatlas      2561 Mar 15 21:38 pandaJob.out
[2026-03-15 23:05:06] -rw-------. 1 boincer umatlas        57 Mar 15 21:38 setup.sh.local
[2026-03-15 23:05:06] -rw-------. 1 boincer umatlas   1006471 Mar 15 21:38 agis_schedconf.cvmfs.json
[2026-03-15 23:05:06] -rw-------. 1 boincer umatlas   1511579 Mar 15 21:38 agis_ddmendpoints.agis.ALL.json
[2026-03-15 23:05:06] -rw-------. 1 boincer umatlas       439 Mar 15 21:38 workernode_map.json
[2026-03-15 23:05:06] drwx------. 5 boincer umatlas      4096 Mar 15 21:38 pilot3
[2026-03-15 23:05:06] -rw-r--r--. 1 boincer umatlas      6656 Mar 15 23:03 init_data.xml
[2026-03-15 23:05:06] -rw-------. 1 boincer umatlas 205151184 Mar 15 23:03 HITS.48967011._008841.pool.root.1
[2026-03-15 23:05:06] -rw-r--r--. 1 boincer umatlas       529 Mar 15 23:04 boinc_task_state.xml
[2026-03-15 23:05:06] -rw-------. 1 boincer umatlas      1045 Mar 15 23:04 memory_monitor_summary.json
[2026-03-15 23:05:06] -rw-------. 1 boincer umatlas    358241 Mar 15 23:04 log.48967011._008841.job.log.tgz.1
[2026-03-15 23:05:06] -rw-------. 1 boincer umatlas        95 Mar 15 23:04 pilot_heartbeat.json
[2026-03-15 23:05:06] -rw-------. 1 boincer umatlas      6376 Mar 15 23:04 heartbeat.json
[2026-03-15 23:05:06] -rw-r--r--. 1 boincer umatlas      8192 Mar 15 23:05 boinc_mmap_file
[2026-03-15 23:05:06] -rw-r--r--. 1 boincer umatlas        27 Mar 15 23:05 wrapper_checkpoint.txt
[2026-03-15 23:05:06] -rw-------. 1 boincer umatlas       823 Mar 15 23:05 pilotlog.txt
[2026-03-15 23:05:06] -rw-------. 1 boincer umatlas    749284 Mar 15 23:05 log.48967011._008841.job.log.1
[2026-03-15 23:05:06] -rw-------. 1 boincer umatlas       357 Mar 15 23:05 output.list
[2026-03-15 23:05:06] -rw-r--r--. 1 boincer umatlas       620 Mar 15 23:05 runtime_log
[2026-03-15 23:05:06] -rw-------. 1 boincer umatlas   1126400 Mar 15 23:05 result.tar.gz
[2026-03-15 23:05:06] -rw-r--r--. 1 boincer umatlas      9333 Mar 15 23:05 runtime_log.err
[2026-03-15 23:05:06] -rw-------. 1 boincer umatlas       651 Mar 15 23:05 9pnLDm53NK9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmquhLDmoObQnn.diag
[2026-03-15 23:05:06] -rw-r--r--. 1 boincer umatlas     21879 Mar 15 23:05 stderr.txt
[2026-03-15 23:05:06] HITS file was successfully produced:
[2026-03-15 23:05:06] -rw-------. 1 boincer umatlas 205151184 Mar 15 23:03 shared/HITS.pool.root.1
[2026-03-15 23:05:06]  *** Contents of shared directory: ***
[2026-03-15 23:05:06] total 414344
[2026-03-15 23:05:06] -rw-r--r--. 2 boincer umatlas 217386571 Mar 15 21:38 ATLAS.root_0
[2026-03-15 23:05:06] -rw-r--r--. 2 boincer umatlas     15845 Mar 15 21:38 start_atlas.sh
[2026-03-15 23:05:06] -rw-r--r--. 2 boincer umatlas    597526 Mar 15 21:38 input.tar.gz
[2026-03-15 23:05:06] -rw-------. 1 boincer umatlas 205151184 Mar 15 23:03 HITS.pool.root.1
[2026-03-15 23:05:06] -rw-------. 1 boincer umatlas   1126400 Mar 15 23:05 result.tar.gz
23:05:07 (3728149): run_atlas exited; CPU time 47576.456620
23:05:07 (3728149): called boinc_finish(0)

</stderr_txt>
]]>

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