Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
21:20:07 (15141): wrapper (7.7.26015): starting
21:20:07 (15141): wrapper: running run_atlas (--nthreads 8)
[2026-03-15 21:20:07] Arguments: --nthreads 8
[2026-03-15 21:20:07] Threads: 8
[2026-03-15 21:20:07] Checking for CVMFS
[2026-03-15 21:20:07] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-15 21:20:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-15 21:20:08] Running cvmfs_config stat atlas.cern.ch
[2026-03-15 21:20:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-15 21:20:08] 2.11.2.0 26356 265313 142856 157335 3 49 10563483 18432000 1889 130560 0 175413606 99.980 10288158 23250 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-15 21:20:08] CVMFS is ok
[2026-03-15 21:20:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-15 21:20:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-15 21:20:08] Further information can be found at the LHC@home message board.
[2026-03-15 21:20:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-15 21:20:08] Checking for apptainer binary...
[2026-03-15 21:20:08] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-15 21:20:08] Running /usr/bin/apptainer --version
[2026-03-15 21:20:08] apptainer version 1.3.2-1.el7
[2026-03-15 21:20:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-15 21:20:09] c-206-6.aglt2.org
[2026-03-15 21:20:09] apptainer works
[2026-03-15 21:20:09] Set ATHENA_PROC_NUMBER=8
[2026-03-15 21:20:09] Set ATHENA_CORE_NUMBER=8
[2026-03-15 21:20:09] Starting ATLAS job with PandaID=7056325388
[2026-03-15 21:20:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
03:48:17 (7914): wrapper (7.7.26015): starting
03:48:17 (7914): wrapper: running run_atlas (--nthreads 8)
[2026-03-16 03:48:17] Arguments: --nthreads 8
[2026-03-16 03:48:17] Threads: 8
[2026-03-16 03:48:17] This job has been restarted, cleaning up previous attempt
[2026-03-16 03:48:17] Checking for CVMFS
[2026-03-16 03:48:17] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-16 03:48:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-16 03:48:18] Running cvmfs_config stat atlas.cern.ch
[2026-03-16 03:48:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-16 03:48:18] 2.11.2.0 26356 265701 142684 157345 3 49 10605223 18432000 1 130560 0 175530618 99.980 10301912 23258 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-16 03:48:18] CVMFS is ok
[2026-03-16 03:48:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-16 03:48:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-16 03:48:18] Further information can be found at the LHC@home message board.
[2026-03-16 03:48:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-16 03:48:18] Checking for apptainer binary...
[2026-03-16 03:48:18] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-16 03:48:18] Running /usr/bin/apptainer --version
[2026-03-16 03:48:18] apptainer version 1.3.2-1.el7
[2026-03-16 03:48:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-16 03:48:19] c-206-6.aglt2.org
[2026-03-16 03:48:19] apptainer works
[2026-03-16 03:48:19] Set ATHENA_PROC_NUMBER=8
[2026-03-16 03:48:19] Set ATHENA_CORE_NUMBER=8
[2026-03-16 03:48:19] Starting ATLAS job with PandaID=7056325388
[2026-03-16 03:48:19] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-18 10:02:04]  *** The last 200 lines of the pilot log: ***
[2026-03-18 10:02:04] 2026-03-18 14:01:00,041 | INFO     | sum of square deviations: 10151274515526.06
[2026-03-18 10:02:04] 2026-03-18 14:01:00,326 | INFO     | sum of deviations: 17065134005953.44
[2026-03-18 10:02:04] 2026-03-18 14:01:00,327 | INFO     | mean x: 1773744876.8268209
[2026-03-18 10:02:04] 2026-03-18 14:01:00,327 | INFO     | mean y: 3009132.554860894
[2026-03-18 10:02:04] 2026-03-18 14:01:00,327 | INFO     | intersect: -2978803049.6619906
[2026-03-18 10:02:04] 2026-03-18 14:01:00,331 | INFO     | chi2: 8.254883681379704
[2026-03-18 10:02:04] 2026-03-18 14:01:00,336 | INFO     | sum of square deviations: 10103750645130.137
[2026-03-18 10:02:04] 2026-03-18 14:01:00,686 | INFO     | sum of deviations: 18177169367467.08
[2026-03-18 10:02:04] 2026-03-18 14:01:00,687 | INFO     | mean x: 1773744724.3281152
[2026-03-18 10:02:04] 2026-03-18 14:01:00,700 | INFO     | mean y: 3012700.70507201
[2026-03-18 10:02:04] 2026-03-18 14:01:00,700 | INFO     | intersect: -3188045689.508009
[2026-03-18 10:02:04] 2026-03-18 14:01:00,704 | INFO     | chi2: 5.223741027496085
[2026-03-18 10:02:04] 2026-03-18 14:01:00,705 | INFO     | current chi2=5.223741027496085 (change=36.71938661862526 %)
[2026-03-18 10:02:04] 2026-03-18 14:01:00,709 | INFO     | sum of square deviations: 10056375335659.195
[2026-03-18 10:02:04] 2026-03-18 14:01:01,004 | INFO     | sum of deviations: 18860744468605.16
[2026-03-18 10:02:04] 2026-03-18 14:01:01,005 | INFO     | mean x: 1773744571.8294137
[2026-03-18 10:02:04] 2026-03-18 14:01:01,005 | INFO     | mean y: 3014900.441517717
[2026-03-18 10:02:04] 2026-03-18 14:01:01,005 | INFO     | intersect: -3323645253.4634404
[2026-03-18 10:02:04] 2026-03-18 14:01:01,009 | INFO     | chi2: 3.81016388149381
[2026-03-18 10:02:04] 2026-03-18 14:01:01,010 | INFO     | current chi2=3.81016388149381 (change=27.060628361200557 %)
[2026-03-18 10:02:04] 2026-03-18 14:01:01,014 | INFO     | sum of square deviations: 10009148160144.416
[2026-03-18 10:02:04] 2026-03-18 14:01:01,185 | INFO     | monitor loop #14092: job 0:7056325388 is in state 'finished'
[2026-03-18 10:02:04] 2026-03-18 14:01:01,185 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-18 10:02:04] 2026-03-18 14:01:01,355 | INFO     | sum of deviations: 19002772552034.793
[2026-03-18 10:02:04] 2026-03-18 14:01:01,356 | INFO     | mean x: 1773744419.330402
[2026-03-18 10:02:04] 2026-03-18 14:01:01,356 | INFO     | mean y: 3015358.759736181
[2026-03-18 10:02:04] 2026-03-18 14:01:01,357 | INFO     | intersect: -3364510151.572037
[2026-03-18 10:02:04] 2026-03-18 14:01:01,361 | INFO     | chi2: 3.6755586189824982
[2026-03-18 10:02:04] 2026-03-18 14:01:01,361 | INFO     | current chi2=3.6755586189824982 (change=3.532794564693072 %)
[2026-03-18 10:02:04] 2026-03-18 14:01:01,362 | INFO     | right removable region: 3183
[2026-03-18 10:02:04] 2026-03-18 14:01:01,367 | INFO     | sum of square deviations: 10103749031680.135
[2026-03-18 10:02:04] 2026-03-18 14:01:01,689 | INFO     | sum of deviations: 16103661755768.793
[2026-03-18 10:02:04] 2026-03-18 14:01:01,693 | INFO     | mean x: 1773745029.3281152
[2026-03-18 10:02:04] 2026-03-18 14:01:01,693 | INFO     | mean y: 3012216.6862867875
[2026-03-18 10:02:04] 2026-03-18 14:01:01,693 | INFO     | intersect: -2824036426.7147794
[2026-03-18 10:02:04] 2026-03-18 14:01:01,697 | INFO     | chi2: 5.864211417153581
[2026-03-18 10:02:04] 2026-03-18 14:01:01,698 | INFO     | current chi2=5.864211417153581 (change=28.960702009874367 %)
[2026-03-18 10:02:04] 2026-03-18 14:01:01,702 | INFO     | sum of square deviations: 10056372692897.176
[2026-03-18 10:02:04] 2026-03-18 14:01:01,769 | INFO     | PID=19593 has CPU usage=31.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-18 10:02:04] 2026-03-18 14:01:01,770 | INFO     | .. there are 3 such processes running
[2026-03-18 10:02:04] 2026-03-18 14:01:01,944 | INFO     | sum of deviations: 15799221335363.887
[2026-03-18 10:02:04] 2026-03-18 14:01:01,944 | INFO     | mean x: 1773745181.8284729
[2026-03-18 10:02:04] 2026-03-18 14:01:01,945 | INFO     | mean y: 3013196.628723738
[2026-03-18 10:02:04] 2026-03-18 14:01:01,945 | INFO     | intersect: -2783656865.831922
[2026-03-18 10:02:04] 2026-03-18 14:01:01,948 | INFO     | chi2: 5.733113502763535
[2026-03-18 10:02:04] 2026-03-18 14:01:01,948 | INFO     | current chi2=5.733113502763535 (change=2.2355591411074895 %)
[2026-03-18 10:02:04] 2026-03-18 14:01:01,949 | INFO     | left removable region: 20
[2026-03-18 10:02:04] 2026-03-18 14:01:01,953 | INFO     | sum of square deviations: 9812405015810.494
[2026-03-18 10:02:04] 2026-03-18 14:01:02,188 | INFO     | sum of deviations: 17234711120734.79
[2026-03-18 10:02:04] 2026-03-18 14:01:02,189 | INFO     | mean x: 1773744998.8318052
[2026-03-18 10:02:04] 2026-03-18 14:01:02,189 | INFO     | mean y: 3021145.8491938035
[2026-03-18 10:02:04] 2026-03-18 14:01:02,189 | INFO     | intersect: -3112421256.646173
[2026-03-18 10:02:04] 2026-03-18 14:01:02,193 | INFO     | chi2: 0.9849750503058736
[2026-03-18 10:02:04] 2026-03-18 14:01:02,193 | INFO     | current memory leak: 1.76 B/s (using 3163 data points, chi2=0.98)
[2026-03-18 10:02:04] 2026-03-18 14:01:02,196 | INFO     | could have reported an average CPU frequency of 2416 MHz (111 samples)
[2026-03-18 10:02:04] 2026-03-18 14:01:02,196 | INFO     | ..............................
[2026-03-18 10:02:04] 2026-03-18 14:01:02,197 | INFO     | . Timing measurements:
[2026-03-18 10:02:04] 2026-03-18 14:01:02,197 | INFO     | . get job = 0 s
[2026-03-18 10:02:04] 2026-03-18 14:01:02,197 | INFO     | . initial setup = 2 s
[2026-03-18 10:02:04] 2026-03-18 14:01:02,197 | INFO     | . payload setup = 6 s
[2026-03-18 10:02:04] 2026-03-18 14:01:02,197 | INFO     | . stage-in = 0 s
[2026-03-18 10:02:04] 2026-03-18 14:01:02,197 | INFO     | . payload execution = 195115 s
[2026-03-18 10:02:04] 2026-03-18 14:01:02,198 | INFO     | . stage-out = 6 s
[2026-03-18 10:02:04] 2026-03-18 14:01:02,198 | INFO     | . log creation = 1 s
[2026-03-18 10:02:04] 2026-03-18 14:01:02,198 | INFO     | ..............................
[2026-03-18 10:02:04] 2026-03-18 14:01:02,737 | INFO     | 
[2026-03-18 10:02:04] 2026-03-18 14:01:02,737 | INFO     | job summary report
[2026-03-18 10:02:04] 2026-03-18 14:01:02,738 | INFO     | --------------------------------------------------
[2026-03-18 10:02:04] 2026-03-18 14:01:02,738 | INFO     | PanDA job id: 7056325388
[2026-03-18 10:02:04] 2026-03-18 14:01:02,738 | INFO     | task id: 49146883
[2026-03-18 10:02:04] 2026-03-18 14:01:02,738 | INFO     | errors: (none)
[2026-03-18 10:02:04] 2026-03-18 14:01:02,738 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-18 10:02:04] 2026-03-18 14:01:02,739 | INFO     | pilot state: finished 
[2026-03-18 10:02:04] 2026-03-18 14:01:02,739 | INFO     | transexitcode: 0
[2026-03-18 10:02:04] 2026-03-18 14:01:02,739 | INFO     | exeerrorcode: 0
[2026-03-18 10:02:04] 2026-03-18 14:01:02,739 | INFO     | exeerrordiag: 
[2026-03-18 10:02:04] 2026-03-18 14:01:02,739 | INFO     | exitcode: 0
[2026-03-18 10:02:04] 2026-03-18 14:01:02,739 | INFO     | exitmsg: OK
[2026-03-18 10:02:04] 2026-03-18 14:01:02,740 | INFO     | cpuconsumptiontime: 1523085 s
[2026-03-18 10:02:04] 2026-03-18 14:01:02,740 | INFO     | nevents: 2050
[2026-03-18 10:02:04] 2026-03-18 14:01:02,740 | INFO     | neventsw: 0
[2026-03-18 10:02:04] 2026-03-18 14:01:02,740 | INFO     | pid: 26712
[2026-03-18 10:02:04] 2026-03-18 14:01:02,740 | INFO     | pgrp: 26712
[2026-03-18 10:02:04] 2026-03-18 14:01:02,740 | INFO     | corecount: 8
[2026-03-18 10:02:04] 2026-03-18 14:01:02,741 | INFO     | event service: False
[2026-03-18 10:02:04] 2026-03-18 14:01:02,741 | INFO     | sizes: {0: 2280919, 11: 2280919, 195126: 2399343, 195132: 2408341, 195133: 2408397, 195136: 2408643}
[2026-03-18 10:02:04] 2026-03-18 14:01:02,741 | INFO     | --------------------------------------------------
[2026-03-18 10:02:04] 2026-03-18 14:01:02,741 | INFO     | 
[2026-03-18 10:02:04] 2026-03-18 14:01:02,741 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-03-18 10:02:04] 2026-03-18 14:01:02,761 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-18 10:02:04] 2026-03-18 14:01:02,761 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-18 10:02:04] 2026-03-18 14:01:02,762 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-18 10:02:04] 2026-03-18 14:01:02,762 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-18 10:02:04] 2026-03-18 14:01:02,762 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-18 10:02:04] 2026-03-18 14:01:02,762 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-18 10:02:04] 2026-03-18 14:01:02,762 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-18 10:02:04] 2026-03-18 14:01:02,763 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-18 10:02:04] 2026-03-18 14:01:02,763 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-18 10:02:04] 2026-03-18 14:01:02,763 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-18 10:02:04] 2026-03-18 14:01:02,763 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-18 10:02:04] 2026-03-18 14:01:02,763 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-18 10:02:04] 2026-03-18 14:01:02,763 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-18 10:02:04] 2026-03-18 14:01:02,764 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-18 10:02:04] 2026-03-18 14:01:02,764 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-18 10:02:04] 2026-03-18 14:01:02,764 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-18 10:02:04] 2026-03-18 14:01:02,764 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-18 10:02:04] 2026-03-18 14:01:02,764 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-18 10:02:04] 2026-03-18 14:01:02,765 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-18 10:02:04] 2026-03-18 14:01:02,765 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-18 10:02:04] 2026-03-18 14:01:02,765 | INFO     | job 7056325388 has completed (purged errors)
[2026-03-18 10:02:04] 2026-03-18 14:01:02,765 | INFO     | overall cleanup function is called
[2026-03-18 10:02:04] 2026-03-18 14:01:03,783 | INFO     | --- collectZombieJob: --- 10, [26712]
[2026-03-18 10:02:04] 2026-03-18 14:01:03,783 | INFO     | zombie collector waiting for pid 26712
[2026-03-18 10:02:04] 2026-03-18 14:01:03,784 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-18 10:02:04] 2026-03-18 14:01:03,784 | INFO     | collected zombie processes
[2026-03-18 10:02:04] 2026-03-18 14:01:03,784 | INFO     | will attempt to kill all subprocesses of pid=26712
[2026-03-18 10:02:04] 2026-03-18 14:01:03,938 | INFO     | process IDs to be killed: [26712] (in reverse order)
[2026-03-18 10:02:04] 2026-03-18 14:01:03,983 | WARNING  | found no corresponding commands to process id(s)
[2026-03-18 10:02:04] 2026-03-18 14:01:03,983 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-18 10:02:04] 2026-03-18 14:01:03,986 | INFO     | did not find any defunct processes belonging to 26712
[2026-03-18 10:02:04] 2026-03-18 14:01:03,988 | INFO     | did not find any defunct processes belonging to 26712
[2026-03-18 10:02:04] 2026-03-18 14:01:03,989 | INFO     | ready for new job
[2026-03-18 10:02:04] 2026-03-18 14:01:03,989 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-18 10:02:04] 2026-03-18 14:01:03,998 | INFO     | **************************************
[2026-03-18 10:02:04] 2026-03-18 14:01:03,998 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-18 10:02:04] 2026-03-18 14:01:03,999 | INFO     | **************************************
[2026-03-18 10:02:04] 2026-03-18 14:01:03,999 | INFO     | 
[2026-03-18 10:02:04] 2026-03-18 14:01:04,000 | INFO     | architecture information:
[2026-03-18 10:02:04] 2026-03-18 14:01:04,001 | INFO     | executing command: cat /etc/os-release
[2026-03-18 10:02:04] 2026-03-18 14:01:04,011 | INFO     | cat /etc/os-release:
[2026-03-18 10:02:04] NAME="CentOS Linux"
[2026-03-18 10:02:04] VERSION="7 (Core)"
[2026-03-18 10:02:04] ID="centos"
[2026-03-18 10:02:04] ID_LIKE="rhel fedora"
[2026-03-18 10:02:04] VERSION_ID="7"
[2026-03-18 10:02:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-18 10:02:04] ANSI_COLOR="0;31"
[2026-03-18 10:02:04] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-18 10:02:04] HOME_URL="https://www.centos.org/"
[2026-03-18 10:02:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-18 10:02:04] 
[2026-03-18 10:02:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-18 10:02:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-18 10:02:04] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-18 10:02:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-18 10:02:04] 
[2026-03-18 10:02:04] 2026-03-18 14:01:04,012 | INFO     | **************************************
[2026-03-18 10:02:04] 2026-03-18 14:01:04,515 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-03-18 10:02:04] 2026-03-18 14:01:04,530 | INFO     | sufficient remaining disk space (23624417280 B)
[2026-03-18 10:02:04] 2026-03-18 14:01:04,530 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-18 10:02:04] 2026-03-18 14:01:04,530 | INFO     | current server update state: UPDATING_FINAL
[2026-03-18 10:02:04] 2026-03-18 14:01:04,531 | INFO     | update_server=False
[2026-03-18 10:02:04] 2026-03-18 14:01:04,531 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-18 10:02:04] 2026-03-18 14:01:04,531 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-18 10:02:04] 2026-03-18 14:01:04,704 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-18 10:02:04] 2026-03-18 14:01:04,704 | INFO     | aborting loop
[2026-03-18 10:02:04] 2026-03-18 14:01:04,823 | INFO     | all data control threads have been joined
[2026-03-18 10:02:04] 2026-03-18 14:01:05,058 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-18 10:02:04] 2026-03-18 14:01:05,069 | INFO     | all job control threads have been joined
[2026-03-18 10:02:04] 2026-03-18 14:01:05,536 | INFO     | [job] retrieve thread has finished
[2026-03-18 10:02:04] 2026-03-18 14:01:05,710 | INFO     | [job] job monitor thread has finished
[2026-03-18 10:02:04] 2026-03-18 14:01:05,829 | INFO     | [data] control thread has finished
[2026-03-18 10:02:04] 2026-03-18 14:01:05,867 | INFO     | [payload] validate_post thread has finished
[2026-03-18 10:02:04] 2026-03-18 14:01:05,942 | INFO     | all payload control threads have been joined
[2026-03-18 10:02:04] 2026-03-18 14:01:06,007 | INFO     | [payload] validate_pre thread has finished
[2026-03-18 10:02:04] 2026-03-18 14:01:06,019 | INFO     | [job] create_data_payload thread has finished
[2026-03-18 10:02:04] 2026-03-18 14:01:06,074 | INFO     | [job] validate thread has finished
[2026-03-18 10:02:04] 2026-03-18 14:01:06,074 | INFO     | [job] control thread has finished
[2026-03-18 10:02:04] 2026-03-18 14:01:06,192 | INFO     | [data] copytool_in thread has finished
[2026-03-18 10:02:04] 2026-03-18 14:01:06,373 | INFO     | [payload] execute_payloads thread has finished
[2026-03-18 10:02:04] 2026-03-18 14:01:06,537 | INFO     | [data] copytool_out thread has finished
[2026-03-18 10:02:04] 2026-03-18 14:01:06,893 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-18 10:02:04] 2026-03-18 14:01:06,949 | INFO     | [payload] control thread has finished
[2026-03-18 10:02:04] 2026-03-18 14:01:06,999 | INFO     | [payload] failed_post thread has finished
[2026-03-18 10:02:04] 2026-03-18 14:01:07,361 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-18 10:02:04] 2026-03-18 14:01:08,367 | INFO     | [job] queue monitor thread has finished
[2026-03-18 10:02:04] 2026-03-18 14:01:09,061 | INFO     | [data] queue_monitor thread has finished
[2026-03-18 10:02:04] 2026-03-18 14:01:33,994 | INFO     | PID=19593 has CPU usage=3.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-18 10:02:04] 2026-03-18 14:01:33,994 | INFO     | .. there are 3 such processes running
[2026-03-18 10:02:04] 2026-03-18 14:01:33,995 | INFO     | found 0 job(s) in 20 queues
[2026-03-18 10:02:04] 2026-03-18 14:01:33,995 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-18 10:02:04] 2026-03-18 14:01:33,996 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-18 10:02:04] 2026-03-18 14:01:58,882 | INFO     | [monitor] cgroup control has ended
[2026-03-18 10:02:04] 2026-03-18 14:01:59,390 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139977836246848)>', '<ExcThread(monitor, started 139977245570816)>']
[2026-03-18 10:02:04] 2026-03-18 14:02:00,131 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-18 10:02:04] 2026-03-18 14:02:00,131 | INFO     | [monitor] control thread has ended
[2026-03-18 10:02:04] 2026-03-18 14:02:04,415 | INFO     | all workflow threads have been joined
[2026-03-18 10:02:04] 2026-03-18 14:02:04,415 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-18 10:02:04] 2026-03-18 14:02:04,415 | INFO     | traces error code: 0
[2026-03-18 10:02:04] 2026-03-18 14:02:04,416 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-18 10:02:04] 2026-03-18 14:02:04,565 [wrapper] ==== pilot stdout END ====
[2026-03-18 10:02:04] 2026-03-18 14:02:04,569 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-18 10:02:04] 2026-03-18 14:02:04,575 [wrapper] pilotpid: 19593
[2026-03-18 10:02:04] 2026-03-18 14:02:04,577 [wrapper] Pilot exit status: 0
[2026-03-18 10:02:04] 2026-03-18 14:02:04,587 [wrapper] pandaids: 7056325388 7056325388
[2026-03-18 10:02:04] 2026-03-18 14:02:04,630 [wrapper] cleanup supervisor_pilot 17451 19596
[2026-03-18 10:02:04] 2026-03-18 14:02:04,632 [wrapper] Test setup, not cleaning
[2026-03-18 10:02:04] 2026-03-18 14:02:04,634 [wrapper] apfmon messages muted
[2026-03-18 10:02:04] 2026-03-18 14:02:04,636 [wrapper] ==== wrapper stdout END ====
[2026-03-18 10:02:04] 2026-03-18 14:02:04,639 [wrapper] ==== wrapper stderr END ====
[2026-03-18 10:02:04]  *** Error codes and diagnostics ***
[2026-03-18 10:02:04]     "exeErrorCode": 0,
[2026-03-18 10:02:04]     "exeErrorDiag": "",
[2026-03-18 10:02:04]     "pilotErrorCode": 0,
[2026-03-18 10:02:04]     "pilotErrorDiag": "",
[2026-03-18 10:02:04]  *** Listing of results directory ***
[2026-03-18 10:02:04] total 2451180
[2026-03-18 10:02:04] drwx------ 5 boincer umatlas       4096 Mar 10 12:00 pilot3
[2026-03-18 10:02:04] -rw-r--r-- 1 boincer umatlas       5111 Mar 15 21:16 queuedata.json
[2026-03-18 10:02:04] -rwx------ 1 boincer umatlas      36322 Mar 15 21:19 runpilot2-wrapper.sh
[2026-03-18 10:02:04] -rw-r--r-- 1 boincer umatlas     585013 Mar 15 21:19 pilot3.tar.gz
[2026-03-18 10:02:04] -rw-r--r-- 1 boincer umatlas        100 Mar 15 21:20 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-18 10:02:04] -rwxr-xr-x 1 boincer umatlas       7986 Mar 15 21:20 run_atlas
[2026-03-18 10:02:04] -rw-r--r-- 1 boincer umatlas        105 Mar 15 21:20 job.xml
[2026-03-18 10:02:04] -rw-r--r-- 3 boincer umatlas  330233871 Mar 15 21:20 EVNT.49146874._000001.pool.root.1
[2026-03-18 10:02:04] -rw-r--r-- 3 boincer umatlas  330233871 Mar 15 21:20 ATLAS.root_0
[2026-03-18 10:02:04] -rw-r--r-- 2 boincer umatlas      15845 Mar 15 21:20 start_atlas.sh
[2026-03-18 10:02:04] drwxrwx--x 2 boincer umatlas       4096 Mar 15 21:20 shared
[2026-03-18 10:02:04] -rw-r--r-- 2 boincer umatlas     597706 Mar 15 21:20 input.tar.gz
[2026-03-18 10:02:04] -rw-r--r-- 1 boincer umatlas          0 Mar 15 21:20 boinc_lockfile
[2026-03-18 10:02:04] -rw-r--r-- 1 boincer umatlas       2935 Mar 16 03:48 pandaJob.out
[2026-03-18 10:02:04] -rw------- 1 boincer umatlas         57 Mar 16 03:48 setup.sh.local
[2026-03-18 10:02:04] -rw------- 1 boincer umatlas    1006471 Mar 16 03:48 agis_schedconf.cvmfs.json
[2026-03-18 10:02:04] -rw------- 1 boincer umatlas        444 Mar 16 03:48 workernode_map.json
[2026-03-18 10:02:04] -rw-r--r-- 1 boincer umatlas        534 Mar 18 09:45 boinc_task_state.xml
[2026-03-18 10:02:04] -rw-r--r-- 1 boincer umatlas       5953 Mar 18 09:54 init_data.xml
[2026-03-18 10:02:04] -rw------- 1 boincer umatlas 1783228807 Mar 18 09:59 HITS.49146883._000004.pool.root.1
[2026-03-18 10:02:04] -rw------- 1 boincer umatlas       1068 Mar 18 10:00 memory_monitor_summary.json
[2026-03-18 10:02:04] -rw------- 1 boincer umatlas    1511579 Mar 18 10:00 agis_ddmendpoints.agis.ALL.json
[2026-03-18 10:02:04] -rw------- 1 boincer umatlas    4126832 Mar 18 10:00 log.49146883._000004.job.log.tgz.1
[2026-03-18 10:02:04] -rw------- 1 boincer umatlas       7081 Mar 18 10:01 heartbeat.json
[2026-03-18 10:02:04] -rw------- 1 boincer umatlas         96 Mar 18 10:01 pilot_heartbeat.json
[2026-03-18 10:02:04] -rw-r--r-- 1 boincer umatlas       8192 Mar 18 10:01 boinc_mmap_file
[2026-03-18 10:02:04] -rw-r--r-- 1 boincer umatlas         31 Mar 18 10:01 wrapper_checkpoint.txt
[2026-03-18 10:02:04] -rw------- 1 boincer umatlas       4817 Mar 18 10:02 pilotlog.txt
[2026-03-18 10:02:04] -rw------- 1 boincer umatlas   27059004 Mar 18 10:02 log.49146883._000004.job.log.1
[2026-03-18 10:02:04] -rw------- 1 boincer umatlas        353 Mar 18 10:02 output.list
[2026-03-18 10:02:04] -rw-r--r-- 1 boincer umatlas        620 Mar 18 10:02 runtime_log
[2026-03-18 10:02:04] -rw------- 1 boincer umatlas   31201280 Mar 18 10:02 result.tar.gz
[2026-03-18 10:02:04] -rw-r--r-- 1 boincer umatlas       9423 Mar 18 10:02 runtime_log.err
[2026-03-18 10:02:04] -rw------- 1 boincer umatlas        798 Mar 18 10:02 7DgMDmKnBM9n9Rq4apOajLDm4fhM0noT9bVooX4SDmrXsLDmWdbern.diag
[2026-03-18 10:02:04] -rw-r--r-- 1 boincer umatlas      23296 Mar 18 10:02 stderr.txt
[2026-03-18 10:02:04] HITS file was successfully produced:
[2026-03-18 10:02:04] -rw------- 1 boincer umatlas 1783228807 Mar 18 09:59 shared/HITS.pool.root.1
[2026-03-18 10:02:04]  *** Contents of shared directory: ***
[2026-03-18 10:02:04] total 2095008
[2026-03-18 10:02:04] -rw-r--r-- 3 boincer umatlas  330233871 Mar 15 21:20 ATLAS.root_0
[2026-03-18 10:02:04] -rw-r--r-- 2 boincer umatlas      15845 Mar 15 21:20 start_atlas.sh
[2026-03-18 10:02:04] -rw-r--r-- 2 boincer umatlas     597706 Mar 15 21:20 input.tar.gz
[2026-03-18 10:02:04] -rw------- 1 boincer umatlas 1783228807 Mar 18 09:59 HITS.pool.root.1
[2026-03-18 10:02:04] -rw------- 1 boincer umatlas   31201280 Mar 18 10:02 result.tar.gz
10:02:05 (7914): run_atlas exited; CPU time 1522065.570254
10:02:05 (7914): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN