Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:02:03 (483251): wrapper (7.7.26015): starting
13:02:03 (483251): wrapper: running run_atlas (--nthreads 4)
[2026-03-16 13:02:03] Arguments: --nthreads 4
[2026-03-16 13:02:03] Threads: 4
[2026-03-16 13:02:03] Checking for CVMFS
[2026-03-16 13:02:03] No cvmfs_config command found, will try listing directly
[2026-03-16 13:02:03] CVMFS is ok
[2026-03-16 13:02:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-16 13:02:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-16 13:02:03] Further information can be found at the LHC@home message board.
[2026-03-16 13:02:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-16 13:02:03] Checking for apptainer binary...
[2026-03-16 13:02:03] which: no apptainer in ((null))
[2026-03-16 13:02:03] apptainer is not installed, using version from CVMFS
[2026-03-16 13:02:03] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-16 13:02:03] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot156/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut29.grid.cesnet.cz
[2026-03-16 13:02:03] apptainer works
[2026-03-16 13:02:03] Set ATHENA_PROC_NUMBER=4
[2026-03-16 13:02:03] Set ATHENA_CORE_NUMBER=4
[2026-03-16 13:02:03] Starting ATLAS job with PandaID=7045392532
[2026-03-16 13:02:03] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot156/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-16 14:06:30]  *** The last 200 lines of the pilot log: ***
[2026-03-16 14:06:30]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-16 14:06:30]  is_altstaged=None
[2026-03-16 14:06:30]  is_tar=False
[2026-03-16 14:06:30]  lfn=log.48958610._001148.job.log.tgz.1
[2026-03-16 14:06:30]  mtime=0
[2026-03-16 14:06:30]  protocol_id=None
[2026-03-16 14:06:30]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-16 14:06:30]  replicas=None
[2026-03-16 14:06:30]  scope=mc23_13p6TeV
[2026-03-16 14:06:30]  status=None
[2026-03-16 14:06:30]  status_code=0
[2026-03-16 14:06:30]  storage_token=
[2026-03-16 14:06:30]  surl=/var/lib/boinc/var/slot156/slots/0/PanDA_Pilot-7045392532/log.48958610._001148.job.log.tgz.1
[2026-03-16 14:06:30]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/51/77/log.48958610._001148.job.log.tgz.1
[2026-03-16 14:06:30]  workdir=None
[2026-03-16 14:06:30] ]
[2026-03-16 14:06:30] 2026-03-16 13:05:55,083 | INFO     | transferring file log.48958610._001148.job.log.tgz.1 from /var/lib/boinc/var/slot156/slots/0/PanDA_Pilot-7045392532/log.48958610._001148.job.log.tgz.1 to /var/lib/
[2026-03-16 14:06:30] 2026-03-16 13:05:55,084 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot156/slots/0/PanDA_Pilot-7045392532/log.48958610._001148.job.log.tgz.1 /var/lib/boinc/var/slot156/slots/0/
[2026-03-16 14:06:30] 2026-03-16 13:05:55,099 | INFO     | adding to output.list: log.48958610._001148.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/51/77/log.48958610._001148.job.log.tg
[2026-03-16 14:06:30] 2026-03-16 13:05:55,099 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-16 14:06:30] 2026-03-16 13:05:55,099 | INFO     | summary of transferred files:
[2026-03-16 14:06:30] 2026-03-16 13:05:55,099 | INFO     |  -- lfn=log.48958610._001148.job.log.tgz.1, status_code=0, status=transferred
[2026-03-16 14:06:30] 2026-03-16 13:05:55,099 | INFO     | stage-out finished correctly
[2026-03-16 14:06:30] 2026-03-16 13:05:55,147 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-16 14:06:30] 2026-03-16 13:05:55,692 | INFO     | time since job start (3821s) is within the limit (349056.0s)
[2026-03-16 14:06:30] 2026-03-16 13:05:56,057 | INFO     | monitor loop #280: job 0:7045392532 is in state 'finished'
[2026-03-16 14:06:30] 2026-03-16 13:05:56,058 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-16 14:06:30] 2026-03-16 13:05:57,222 | INFO     | PID=487862 has CPU usage=12.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-16 14:06:30] 2026-03-16 13:05:57,222 | INFO     | .. there are 31 such processes running
[2026-03-16 14:06:30] 2026-03-16 13:05:57,449 | INFO     | job 7045392532 has state=finished
[2026-03-16 14:06:30] 2026-03-16 13:05:57,449 | INFO     | preparing for final server update for job 7045392532 in state='finished'
[2026-03-16 14:06:30] 2026-03-16 13:05:57,449 | INFO     | reading metadata from: /var/lib/boinc/var/slot156/slots/0/PanDA_Pilot-7045392532/jobReport.json
[2026-03-16 14:06:30] 2026-03-16 13:05:57,450 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot156/slots/0/workernode_map.json
[2026-03-16 14:06:30] 2026-03-16 13:05:57,451 | INFO     | this job has now completed (state=finished)
[2026-03-16 14:06:30] 2026-03-16 13:05:57,451 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-16 14:06:30] 2026-03-16 13:05:57,451 | INFO     | log transfer has been attempted: DONE
[2026-03-16 14:06:30] 2026-03-16 13:05:57,451 | INFO     | job 7045392532 has finished - writing final server update
[2026-03-16 14:06:30] 2026-03-16 13:05:57,451 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_1088869/.job.ad'
[2026-03-16 14:06:30] 2026-03-16 13:05:57,451 | INFO     | total number of processed events: 400 (read)
[2026-03-16 14:06:30] 2026-03-16 13:05:57,468 | INFO     | using path: /var/lib/boinc/var/slot156/slots/0/PanDA_Pilot-7045392532/memory_monitor_summary.json (trf name=prmon)
[2026-03-16 14:06:30] 2026-03-16 13:05:57,469 | INFO     | extracted standard info from prmon json
[2026-03-16 14:06:30] 2026-03-16 13:05:57,469 | INFO     | extracted standard memory fields from prmon json
[2026-03-16 14:06:30] 2026-03-16 13:05:57,469 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-16 14:06:30] 2026-03-16 13:05:57,469 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-16 14:06:30] 2026-03-16 13:05:57,469 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-16 14:06:30] 2026-03-16 13:05:57,470 | INFO     | fitting pss+swap vs Time
[2026-03-16 14:06:30] 2026-03-16 13:05:57,470 | INFO     | sum of square deviations: 54438230.0
[2026-03-16 14:06:30] 2026-03-16 13:05:57,470 | INFO     | sum of deviations: 43287887.49999999
[2026-03-16 14:06:30] 2026-03-16 13:05:57,470 | INFO     | mean x: 1773664536.5
[2026-03-16 14:06:30] 2026-03-16 13:05:57,470 | INFO     | mean y: 2384618.9821428573
[2026-03-16 14:06:30] 2026-03-16 13:05:57,470 | INFO     | intersect: -1407988034.918464
[2026-03-16 14:06:30] 2026-03-16 13:05:57,471 | INFO     | chi2: 0.00020844058435544078
[2026-03-16 14:06:30] 2026-03-16 13:05:57,471 | INFO     | current memory leak: 0.80 B/s (using 56 data points, chi2=0.00)
[2026-03-16 14:06:30] 2026-03-16 13:05:57,471 | INFO     | could have reported an average CPU frequency of 3629 MHz (6 samples)
[2026-03-16 14:06:30] 2026-03-16 13:05:57,471 | INFO     | ..............................
[2026-03-16 14:06:30] 2026-03-16 13:05:57,471 | INFO     | . Timing measurements:
[2026-03-16 14:06:30] 2026-03-16 13:05:57,471 | INFO     | . get job = 0 s
[2026-03-16 14:06:30] 2026-03-16 13:05:57,471 | INFO     | . initial setup = 4 s
[2026-03-16 14:06:30] 2026-03-16 13:05:57,471 | INFO     | . payload setup = 4 s
[2026-03-16 14:06:30] 2026-03-16 13:05:57,471 | INFO     | . stage-in = 0 s
[2026-03-16 14:06:30] 2026-03-16 13:05:57,471 | INFO     | . payload execution = 3801 s
[2026-03-16 14:06:30] 2026-03-16 13:05:57,471 | INFO     | . stage-out = 0 s
[2026-03-16 14:06:30] 2026-03-16 13:05:57,471 | INFO     | . log creation = 0 s
[2026-03-16 14:06:30] 2026-03-16 13:05:57,471 | INFO     | ..............................
[2026-03-16 14:06:30] 2026-03-16 13:05:57,517 | INFO     | 
[2026-03-16 14:06:30] 2026-03-16 13:05:57,517 | INFO     | job summary report
[2026-03-16 14:06:30] 2026-03-16 13:05:57,517 | INFO     | --------------------------------------------------
[2026-03-16 14:06:30] 2026-03-16 13:05:57,517 | INFO     | PanDA job id: 7045392532
[2026-03-16 14:06:30] 2026-03-16 13:05:57,517 | INFO     | task id: 48958610
[2026-03-16 14:06:30] 2026-03-16 13:05:57,517 | INFO     | errors: (none)
[2026-03-16 14:06:30] 2026-03-16 13:05:57,517 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-16 14:06:30] 2026-03-16 13:05:57,517 | INFO     | pilot state: finished 
[2026-03-16 14:06:30] 2026-03-16 13:05:57,517 | INFO     | transexitcode: 0
[2026-03-16 14:06:30] 2026-03-16 13:05:57,517 | INFO     | exeerrorcode: 0
[2026-03-16 14:06:30] 2026-03-16 13:05:57,517 | INFO     | exeerrordiag: 
[2026-03-16 14:06:30] 2026-03-16 13:05:57,517 | INFO     | exitcode: 0
[2026-03-16 14:06:30] 2026-03-16 13:05:57,517 | INFO     | exitmsg: OK
[2026-03-16 14:06:30] 2026-03-16 13:05:57,517 | INFO     | cpuconsumptiontime: 14512 s
[2026-03-16 14:06:30] 2026-03-16 13:05:57,517 | INFO     | nevents: 400
[2026-03-16 14:06:30] 2026-03-16 13:05:57,517 | INFO     | neventsw: 0
[2026-03-16 14:06:30] 2026-03-16 13:05:57,517 | INFO     | pid: 493789
[2026-03-16 14:06:30] 2026-03-16 13:05:57,517 | INFO     | pgrp: 493789
[2026-03-16 14:06:30] 2026-03-16 13:05:57,517 | INFO     | corecount: 4
[2026-03-16 14:06:30] 2026-03-16 13:05:57,517 | INFO     | event service: False
[2026-03-16 14:06:30] 2026-03-16 13:05:57,517 | INFO     | sizes: {0: 2279937, 1: 2280199, 11: 2280227, 3809: 2306057, 3810: 2315135, 3812: 2315273}
[2026-03-16 14:06:30] 2026-03-16 13:05:57,517 | INFO     | --------------------------------------------------
[2026-03-16 14:06:30] 2026-03-16 13:05:57,517 | INFO     | 
[2026-03-16 14:06:30] 2026-03-16 13:05:57,517 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot156/slots/0
[2026-03-16 14:06:30] 2026-03-16 13:05:57,534 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-16 14:06:30] 2026-03-16 13:05:57,534 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-16 14:06:30] 2026-03-16 13:05:57,534 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-16 14:06:30] 2026-03-16 13:05:57,534 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-16 14:06:30] 2026-03-16 13:05:57,534 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-16 14:06:30] 2026-03-16 13:05:57,534 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-16 14:06:30] 2026-03-16 13:05:57,534 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-16 14:06:30] 2026-03-16 13:05:57,534 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-16 14:06:30] 2026-03-16 13:05:57,534 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-16 14:06:30] 2026-03-16 13:05:57,534 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-16 14:06:30] 2026-03-16 13:05:57,534 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-16 14:06:30] 2026-03-16 13:05:57,534 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-16 14:06:30] 2026-03-16 13:05:57,534 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-16 14:06:30] 2026-03-16 13:05:57,534 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-16 14:06:30] 2026-03-16 13:05:57,534 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-16 14:06:30] 2026-03-16 13:05:57,534 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-16 14:06:30] 2026-03-16 13:05:57,534 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-16 14:06:30] 2026-03-16 13:05:57,534 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-16 14:06:30] 2026-03-16 13:05:57,535 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-16 14:06:30] 2026-03-16 13:05:57,535 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-16 14:06:30] 2026-03-16 13:05:57,535 | INFO     | job 7045392532 has completed (purged errors)
[2026-03-16 14:06:30] 2026-03-16 13:05:57,535 | INFO     | overall cleanup function is called
[2026-03-16 14:06:30] 2026-03-16 13:05:58,541 | INFO     | --- collectZombieJob: --- 10, [493789]
[2026-03-16 14:06:30] 2026-03-16 13:05:58,542 | INFO     | zombie collector waiting for pid 493789
[2026-03-16 14:06:30] 2026-03-16 13:05:58,542 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-16 14:06:30] 2026-03-16 13:05:58,542 | INFO     | collected zombie processes
[2026-03-16 14:06:30] 2026-03-16 13:05:58,542 | INFO     | will attempt to kill all subprocesses of pid=493789
[2026-03-16 14:06:30] 2026-03-16 13:05:58,950 | INFO     | process IDs to be killed: [493789] (in reverse order)
[2026-03-16 14:06:30] 2026-03-16 13:05:59,139 | WARNING  | found no corresponding commands to process id(s)
[2026-03-16 14:06:30] 2026-03-16 13:05:59,139 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-16 14:06:30] 2026-03-16 13:05:59,168 | INFO     | did not find any defunct processes belonging to 493789
[2026-03-16 14:06:30] 2026-03-16 13:05:59,195 | INFO     | did not find any defunct processes belonging to 493789
[2026-03-16 14:06:30] 2026-03-16 13:05:59,196 | INFO     | ready for new job
[2026-03-16 14:06:30] 2026-03-16 13:05:59,196 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-16 14:06:30] 2026-03-16 13:05:59,197 | INFO     | **************************************
[2026-03-16 14:06:30] 2026-03-16 13:05:59,197 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-16 14:06:30] 2026-03-16 13:05:59,197 | INFO     | **************************************
[2026-03-16 14:06:30] 2026-03-16 13:05:59,197 | INFO     | 
[2026-03-16 14:06:30] 2026-03-16 13:05:59,203 | INFO     | architecture information:
[2026-03-16 14:06:30] 2026-03-16 13:05:59,203 | INFO     | executing command: cat /etc/os-release
[2026-03-16 14:06:30] 2026-03-16 13:05:59,214 | INFO     | cat /etc/os-release:
[2026-03-16 14:06:30] NAME="CentOS Linux"
[2026-03-16 14:06:30] VERSION="7 (Core)"
[2026-03-16 14:06:30] ID="centos"
[2026-03-16 14:06:30] ID_LIKE="rhel fedora"
[2026-03-16 14:06:30] VERSION_ID="7"
[2026-03-16 14:06:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-16 14:06:30] ANSI_COLOR="0;31"
[2026-03-16 14:06:30] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-16 14:06:30] HOME_URL="https://www.centos.org/"
[2026-03-16 14:06:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-16 14:06:30] 
[2026-03-16 14:06:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-16 14:06:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-16 14:06:30] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-16 14:06:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-16 14:06:30] 
[2026-03-16 14:06:30] 2026-03-16 13:05:59,214 | INFO     | **************************************
[2026-03-16 14:06:30] 2026-03-16 13:05:59,716 | INFO     | executing command: df -mP /var/lib/boinc/var/slot156/slots/0
[2026-03-16 14:06:30] 2026-03-16 13:05:59,729 | INFO     | sufficient remaining disk space (210225856512 B)
[2026-03-16 14:06:30] 2026-03-16 13:05:59,729 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-16 14:06:30] 2026-03-16 13:05:59,729 | INFO     | current server update state: UPDATING_FINAL
[2026-03-16 14:06:30] 2026-03-16 13:05:59,729 | INFO     | update_server=False
[2026-03-16 14:06:30] 2026-03-16 13:05:59,729 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-16 14:06:30] 2026-03-16 13:05:59,729 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-16 14:06:30] 2026-03-16 13:05:59,730 | INFO     | aborting loop
[2026-03-16 14:06:30] 2026-03-16 13:06:00,239 | INFO     | all payload control threads have been joined
[2026-03-16 14:06:30] 2026-03-16 13:06:00,649 | INFO     | all data control threads have been joined
[2026-03-16 14:06:30] 2026-03-16 13:06:00,653 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-16 14:06:30] 2026-03-16 13:06:00,732 | INFO     | [job] job monitor thread has finished
[2026-03-16 14:06:30] 2026-03-16 13:06:00,734 | INFO     | [job] retrieve thread has finished
[2026-03-16 14:06:30] 2026-03-16 13:06:00,930 | INFO     | [job] validate thread has finished
[2026-03-16 14:06:30] 2026-03-16 13:06:01,019 | INFO     | [payload] execute_payloads thread has finished
[2026-03-16 14:06:30] 2026-03-16 13:06:01,130 | INFO     | [job] create_data_payload thread has finished
[2026-03-16 14:06:30] 2026-03-16 13:06:01,153 | INFO     | [payload] validate_pre thread has finished
[2026-03-16 14:06:30] 2026-03-16 13:06:01,197 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-16 14:06:30] 2026-03-16 13:06:01,244 | INFO     | [payload] control thread has finished
[2026-03-16 14:06:30] 2026-03-16 13:06:01,331 | INFO     | [data] copytool_in thread has finished
[2026-03-16 14:06:30] 2026-03-16 13:06:01,333 | INFO     | all job control threads have been joined
[2026-03-16 14:06:30] 2026-03-16 13:06:01,338 | INFO     | [payload] failed_post thread has finished
[2026-03-16 14:06:30] 2026-03-16 13:06:01,655 | INFO     | [data] control thread has finished
[2026-03-16 14:06:30] 2026-03-16 13:06:02,051 | INFO     | [payload] validate_post thread has finished
[2026-03-16 14:06:30] 2026-03-16 13:06:02,338 | INFO     | [job] control thread has finished
[2026-03-16 14:06:30] 2026-03-16 13:06:02,527 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-16 14:06:30] 2026-03-16 13:06:02,655 | INFO     | [data] copytool_out thread has finished
[2026-03-16 14:06:30] 2026-03-16 13:06:03,532 | INFO     | [job] queue monitor thread has finished
[2026-03-16 14:06:30] 2026-03-16 13:06:05,200 | INFO     | [data] queue_monitor thread has finished
[2026-03-16 14:06:30] 2026-03-16 13:06:10,364 | INFO     | job.realtimelogging is not enabled
[2026-03-16 14:06:30] 2026-03-16 13:06:11,369 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-16 14:06:30] 2026-03-16 13:06:19,532 | INFO     | [monitor] cgroup control has ended
[2026-03-16 14:06:30] 2026-03-16 13:06:20,555 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22795536168768)>', '<ExcThread(monitor, started 22795294873344)>']
[2026-03-16 14:06:30] 2026-03-16 13:06:25,581 | INFO     | all workflow threads have been joined
[2026-03-16 14:06:30] 2026-03-16 13:06:25,581 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-16 14:06:30] 2026-03-16 13:06:25,581 | INFO     | traces error code: 0
[2026-03-16 14:06:30] 2026-03-16 13:06:25,581 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-16 14:06:30] 2026-03-16 13:06:29,821 | INFO     | PID=487862 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-16 14:06:30] 2026-03-16 13:06:29,821 | INFO     | .. there are 31 such processes running
[2026-03-16 14:06:30] 2026-03-16 13:06:29,821 | INFO     | found 0 job(s) in 20 queues
[2026-03-16 14:06:30] 2026-03-16 13:06:29,821 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-16 14:06:30] 2026-03-16 13:06:29,821 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-16 14:06:30] 2026-03-16 13:06:29,821 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-16 14:06:30] 2026-03-16 13:06:29,821 | INFO     | [monitor] control thread has ended
[2026-03-16 14:06:30] 2026-03-16 13:06:29,975 [wrapper] ==== pilot stdout END ====
[2026-03-16 14:06:30] 2026-03-16 13:06:29,977 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-16 14:06:30] 2026-03-16 13:06:29,980 [wrapper] pilotpid: 487862
[2026-03-16 14:06:30] 2026-03-16 13:06:29,982 [wrapper] Pilot exit status: 0
[2026-03-16 14:06:30] 2026-03-16 13:06:29,991 [wrapper] pandaids: 7045392532
[2026-03-16 14:06:30] 2026-03-16 13:06:30,125 [wrapper] cleanup supervisor_pilot  713741 487863
[2026-03-16 14:06:30] 2026-03-16 13:06:30,128 [wrapper] Test setup, not cleaning
[2026-03-16 14:06:30] 2026-03-16 13:06:30,130 [wrapper] apfmon messages muted
[2026-03-16 14:06:30] 2026-03-16 13:06:30,132 [wrapper] ==== wrapper stdout END ====
[2026-03-16 14:06:30] 2026-03-16 13:06:30,134 [wrapper] ==== wrapper stderr END ====
[2026-03-16 14:06:30]  *** Error codes and diagnostics ***
[2026-03-16 14:06:30]     "exeErrorCode": 0,
[2026-03-16 14:06:30]     "exeErrorDiag": "",
[2026-03-16 14:06:30]     "pilotErrorCode": 0,
[2026-03-16 14:06:30]     "pilotErrorDiag": "",
[2026-03-16 14:06:30]  *** Listing of results directory ***
[2026-03-16 14:06:30] total 437316
[2026-03-16 14:06:30] -rw-r--r--. 1 boinc boinc    584627 Mar  7 19:53 pilot3.tar.gz
[2026-03-16 14:06:30] -rwx------. 1 boinc boinc     36322 Mar  7 19:56 runpilot2-wrapper.sh
[2026-03-16 14:06:30] -rw-r--r--. 1 boinc boinc      5111 Mar  7 19:57 queuedata.json
[2026-03-16 14:06:30] -rw-r--r--. 1 boinc boinc       100 Mar 16 13:01 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-16 14:06:30] -rwxr-xr-x. 1 boinc boinc      7986 Mar 16 13:01 run_atlas
[2026-03-16 14:06:30] -rw-r--r--. 1 boinc boinc       105 Mar 16 13:01 job.xml
[2026-03-16 14:06:30] -rw-r--r--. 2 boinc boinc 264097407 Mar 16 13:02 EVNT.48958608._000046.pool.root.1
[2026-03-16 14:06:30] -rw-r--r--. 2 boinc boinc     15845 Mar 16 13:02 start_atlas.sh
[2026-03-16 14:06:30] drwxrwx--x. 2 boinc boinc      4096 Mar 16 13:02 shared
[2026-03-16 14:06:30] -rw-r--r--. 2 boinc boinc    597935 Mar 16 13:02 input.tar.gz
[2026-03-16 14:06:30] -rw-r--r--. 1 boinc boinc      6710 Mar 16 13:02 init_data.xml
[2026-03-16 14:06:30] -rw-r--r--. 1 boinc boinc         0 Mar 16 13:02 boinc_lockfile
[2026-03-16 14:06:30] -rw-r--r--. 1 boinc boinc      2527 Mar 16 13:02 pandaJob.out
[2026-03-16 14:06:30] -rw-------. 1 boinc boinc   1006429 Mar 16 13:02 agis_schedconf.cvmfs.json
[2026-03-16 14:06:30] -rw-------. 1 boinc boinc   1511579 Mar 16 13:02 agis_ddmendpoints.agis.ALL.json
[2026-03-16 14:06:30] -rw-------. 1 boinc boinc       445 Mar 16 13:02 workernode_map.json
[2026-03-16 14:06:30] drwx------. 5 boinc boinc      4096 Mar 16 13:02 pilot3
[2026-03-16 14:06:30] -rw-------. 1 boinc boinc 178111564 Mar 16 14:05 HITS.48958610._001148.pool.root.1
[2026-03-16 14:06:30] -rw-r--r--. 1 boinc boinc       529 Mar 16 14:05 boinc_task_state.xml
[2026-03-16 14:06:30] -rw-------. 1 boinc boinc        95 Mar 16 14:05 pilot_heartbeat.json
[2026-03-16 14:06:30] -rw-------. 1 boinc boinc      1029 Mar 16 14:05 memory_monitor_summary.json
[2026-03-16 14:06:30] -rw-------. 1 boinc boinc    264843 Mar 16 14:05 log.48958610._001148.job.log.tgz.1
[2026-03-16 14:06:30] -rw-------. 1 boinc boinc      6348 Mar 16 14:05 heartbeat.json
[2026-03-16 14:06:30] -rw-r--r--. 1 boinc boinc      8192 Mar 16 14:06 boinc_mmap_file
[2026-03-16 14:06:30] -rw-r--r--. 1 boinc boinc        27 Mar 16 14:06 wrapper_checkpoint.txt
[2026-03-16 14:06:30] -rw-------. 1 boinc boinc       822 Mar 16 14:06 pilotlog.txt
[2026-03-16 14:06:30] -rw-------. 1 boinc boinc    572260 Mar 16 14:06 log.48958610._001148.job.log.1
[2026-03-16 14:06:30] -rw-------. 1 boinc boinc       357 Mar 16 14:06 output.list
[2026-03-16 14:06:30] -rw-r--r--. 1 boinc boinc       620 Mar 16 14:06 runtime_log
[2026-03-16 14:06:30] -rw-------. 1 boinc boinc    849920 Mar 16 14:06 result.tar.gz
[2026-03-16 14:06:30] -rw-r--r--. 1 boinc boinc      9221 Mar 16 14:06 runtime_log.err
[2026-03-16 14:06:30] -rw-------. 1 boinc boinc       659 Mar 16 14:06 ikkMDm9zBJ9n9Rq4apOajLDm4fhM0noT9bVooX4SDmKXULDmHYopzm.diag
[2026-03-16 14:06:30] -rw-r--r--. 1 boinc boinc     21361 Mar 16 14:06 stderr.txt
[2026-03-16 14:06:30] HITS file was successfully produced:
[2026-03-16 14:06:30] -rw-------. 1 boinc boinc 178111564 Mar 16 14:05 shared/HITS.pool.root.1
[2026-03-16 14:06:30]  *** Contents of shared directory: ***
[2026-03-16 14:06:30] total 433288
[2026-03-16 14:06:30] -rw-r--r--. 2 boinc boinc 264097407 Mar 16 13:02 ATLAS.root_0
[2026-03-16 14:06:30] -rw-r--r--. 2 boinc boinc     15845 Mar 16 13:02 start_atlas.sh
[2026-03-16 14:06:30] -rw-r--r--. 2 boinc boinc    597935 Mar 16 13:02 input.tar.gz
[2026-03-16 14:06:30] -rw-------. 1 boinc boinc 178111564 Mar 16 14:05 HITS.pool.root.1
[2026-03-16 14:06:30] -rw-------. 1 boinc boinc    849920 Mar 16 14:06 result.tar.gz
14:06:31 (483251): run_atlas exited; CPU time 14673.896077
14:06:31 (483251): called boinc_finish(0)

</stderr_txt>
]]>

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