Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
19:28:37 (2037361): wrapper (7.7.26015): starting
19:28:37 (2037361): wrapper: running run_atlas (--nthreads 12)
[2026-03-15 19:28:37] Arguments: --nthreads 12
[2026-03-15 19:28:37] Threads: 12
[2026-03-15 19:28:37] Checking for CVMFS
[2026-03-15 19:28:37] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-15 19:28:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-15 19:28:37] Running cvmfs_config stat atlas.cern.ch
[2026-03-15 19:28:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-15 19:28:37] 2.13.3.0 6596 165963 346632 157333 2 167 26718374 32935937 14319 16776704 0 666602270 99.671 548204702 32227 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-03-15 19:28:37] CVMFS is ok
[2026-03-15 19:28:37] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-15 19:28:37] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-15 19:28:37] Further information can be found at the LHC@home message board.
[2026-03-15 19:28:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-15 19:28:37] Checking for apptainer binary...
[2026-03-15 19:28:37] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-15 19:28:37] Running /usr/bin/apptainer --version
[2026-03-15 19:28:37] apptainer version 1.4.5-2.el9
[2026-03-15 19:28:37] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-15 19:28:38] c-6-7.aglt2.org
[2026-03-15 19:28:38] apptainer works
[2026-03-15 19:28:38] Set ATHENA_PROC_NUMBER=12
[2026-03-15 19:28:38] Set ATHENA_CORE_NUMBER=12
[2026-03-15 19:28:38] Starting ATLAS job with PandaID=7056259503
[2026-03-15 19:28:38] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-15 20:39:05]  *** The last 200 lines of the pilot log: ***
[2026-03-15 20:39:05]  filetype=log
[2026-03-15 20:39:05]  guid=09641b14-5ce8-41fc-873a-9e5f65de033b
[2026-03-15 20:39:05]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-15 20:39:05]  is_altstaged=None
[2026-03-15 20:39:05]  is_tar=False
[2026-03-15 20:39:05]  lfn=log.48955010._052672.job.log.tgz.1
[2026-03-15 20:39:05]  mtime=0
[2026-03-15 20:39:05]  protocol_id=None
[2026-03-15 20:39:05]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-15 20:39:05]  replicas=None
[2026-03-15 20:39:05]  scope=mc23_13p6TeV
[2026-03-15 20:39:05]  status=None
[2026-03-15 20:39:05]  status_code=0
[2026-03-15 20:39:05]  storage_token=
[2026-03-15 20:39:05]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-7056259503/log.48955010._052672.job.log.tgz.1
[2026-03-15 20:39:05]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c3/eb/log.48955010._052672.job.log.tgz.1
[2026-03-15 20:39:05]  workdir=None
[2026-03-15 20:39:05] ]
[2026-03-15 20:39:05] 2026-03-16 00:37:55,117 | INFO     | transferring file log.48955010._052672.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-7056259503/log.48955010._052672.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-03-15 20:39:05] 2026-03-16 00:37:55,118 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-7056259503/log.48955010._052672.job.log.tgz.1 /tmp/boinchome/slots/0/log.48955010._052672.job
[2026-03-15 20:39:05] 2026-03-16 00:37:55,136 | INFO     | adding to output.list: log.48955010._052672.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c3/eb/log.48955010._052672.job.log.tg
[2026-03-15 20:39:05] 2026-03-16 00:37:55,137 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-15 20:39:05] 2026-03-16 00:37:55,137 | INFO     | summary of transferred files:
[2026-03-15 20:39:05] 2026-03-16 00:37:55,137 | INFO     |  -- lfn=log.48955010._052672.job.log.tgz.1, status_code=0, status=transferred
[2026-03-15 20:39:05] 2026-03-16 00:37:55,137 | INFO     | stage-out finished correctly
[2026-03-15 20:39:05] 2026-03-16 00:37:55,405 | WARNING  | process 2045535 can no longer be monitored (due to stat problems) - aborting
[2026-03-15 20:39:05] 2026-03-16 00:37:55,406 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7056259503/memory_monitor_summary.json (trf name=prmon)
[2026-03-15 20:39:05] 2026-03-16 00:37:55,751 | INFO     | number of running child processes to parent process 2045535: 1
[2026-03-15 20:39:05] 2026-03-16 00:37:55,751 | INFO     | maximum number of monitored processes: 6
[2026-03-15 20:39:05] 2026-03-16 00:37:55,993 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-15 20:39:05] 2026-03-16 00:37:56,385 | INFO     | job 7056259503 has state=finished
[2026-03-15 20:39:05] 2026-03-16 00:37:56,385 | INFO     | preparing for final server update for job 7056259503 in state='finished'
[2026-03-15 20:39:05] 2026-03-16 00:37:56,386 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-7056259503/jobReport.json
[2026-03-15 20:39:05] 2026-03-16 00:37:56,388 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-03-15 20:39:05] 2026-03-16 00:37:56,388 | INFO     | this job has now completed (state=finished)
[2026-03-15 20:39:05] 2026-03-16 00:37:56,388 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-15 20:39:05] 2026-03-16 00:37:56,388 | INFO     | log transfer has been attempted: DONE
[2026-03-15 20:39:05] 2026-03-16 00:37:56,388 | INFO     | job 7056259503 has finished - writing final server update
[2026-03-15 20:39:05] 2026-03-16 00:37:56,389 | INFO     | total number of processed events: 400 (read)
[2026-03-15 20:39:05] 2026-03-16 00:37:56,395 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7056259503/memory_monitor_summary.json (trf name=prmon)
[2026-03-15 20:39:05] 2026-03-16 00:37:56,395 | INFO     | extracted standard info from prmon json
[2026-03-15 20:39:05] 2026-03-16 00:37:56,396 | INFO     | extracted standard memory fields from prmon json
[2026-03-15 20:39:05] 2026-03-16 00:37:56,396 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-15 20:39:05] 2026-03-16 00:37:56,396 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-15 20:39:05] 2026-03-16 00:37:56,396 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-15 20:39:05] 2026-03-16 00:37:56,398 | INFO     | fitting pss+swap vs Time
[2026-03-15 20:39:05] 2026-03-16 00:37:56,398 | INFO     | sum of square deviations: 70365821.93442622
[2026-03-15 20:39:05] 2026-03-16 00:37:56,398 | INFO     | sum of deviations: -7946180393.295082
[2026-03-15 20:39:05] 2026-03-16 00:37:56,398 | INFO     | mean x: 1773619488.0327868
[2026-03-15 20:39:05] 2026-03-16 00:37:56,399 | INFO     | mean y: 3026964.1475409837
[2026-03-15 20:39:05] 2026-03-16 00:37:56,399 | INFO     | intersect: 200292031107.46445
[2026-03-15 20:39:05] 2026-03-16 00:37:56,399 | INFO     | chi2: 0.11515636967607837
[2026-03-15 20:39:05] 2026-03-16 00:37:56,399 | INFO     | current memory leak: -112.93 B/s (using 61 data points, chi2=0.12)
[2026-03-15 20:39:05] 2026-03-16 00:37:56,399 | INFO     | could have reported an average CPU frequency of 2600 MHz (6 samples)
[2026-03-15 20:39:05] 2026-03-16 00:37:56,400 | INFO     | ..............................
[2026-03-15 20:39:05] 2026-03-16 00:37:56,400 | INFO     | . Timing measurements:
[2026-03-15 20:39:05] 2026-03-16 00:37:56,400 | INFO     | . get job = 0 s
[2026-03-15 20:39:05] 2026-03-16 00:37:56,400 | INFO     | . initial setup = 6 s
[2026-03-15 20:39:05] 2026-03-16 00:37:56,400 | INFO     | . payload setup = 5 s
[2026-03-15 20:39:05] 2026-03-16 00:37:56,401 | INFO     | . stage-in = 0 s
[2026-03-15 20:39:05] 2026-03-16 00:37:56,401 | INFO     | . payload execution = 4120 s
[2026-03-15 20:39:05] 2026-03-16 00:37:56,401 | INFO     | . stage-out = 0 s
[2026-03-15 20:39:05] 2026-03-16 00:37:56,401 | INFO     | . log creation = 0 s
[2026-03-15 20:39:05] 2026-03-16 00:37:56,401 | INFO     | ..............................
[2026-03-15 20:39:05] 2026-03-16 00:37:56,797 | INFO     | time since job start (4144s) is within the limit (345600.0s)
[2026-03-15 20:39:05] 2026-03-16 00:37:56,994 | INFO     | 
[2026-03-15 20:39:05] 2026-03-16 00:37:56,995 | INFO     | job summary report
[2026-03-15 20:39:05] 2026-03-16 00:37:56,995 | INFO     | --------------------------------------------------
[2026-03-15 20:39:05] 2026-03-16 00:37:56,995 | INFO     | PanDA job id: 7056259503
[2026-03-15 20:39:05] 2026-03-16 00:37:56,995 | INFO     | task id: 48955010
[2026-03-15 20:39:05] 2026-03-16 00:37:56,995 | INFO     | errors: (none)
[2026-03-15 20:39:05] 2026-03-16 00:37:56,995 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-15 20:39:05] 2026-03-16 00:37:56,995 | INFO     | pilot state: finished 
[2026-03-15 20:39:05] 2026-03-16 00:37:56,996 | INFO     | transexitcode: 0
[2026-03-15 20:39:05] 2026-03-16 00:37:56,996 | INFO     | exeerrorcode: 0
[2026-03-15 20:39:05] 2026-03-16 00:37:56,996 | INFO     | exeerrordiag: 
[2026-03-15 20:39:05] 2026-03-16 00:37:56,996 | INFO     | exitcode: 0
[2026-03-15 20:39:05] 2026-03-16 00:37:56,996 | INFO     | exitmsg: OK
[2026-03-15 20:39:05] 2026-03-16 00:37:56,996 | INFO     | cpuconsumptiontime: 42299 s
[2026-03-15 20:39:05] 2026-03-16 00:37:56,996 | INFO     | nevents: 400
[2026-03-15 20:39:05] 2026-03-16 00:37:56,996 | INFO     | neventsw: 0
[2026-03-15 20:39:05] 2026-03-16 00:37:56,996 | INFO     | pid: 2045535
[2026-03-15 20:39:05] 2026-03-16 00:37:56,997 | INFO     | pgrp: 2045535
[2026-03-15 20:39:05] 2026-03-16 00:37:56,997 | INFO     | corecount: 12
[2026-03-15 20:39:05] 2026-03-16 00:37:56,997 | INFO     | event service: False
[2026-03-15 20:39:05] 2026-03-16 00:37:56,997 | INFO     | sizes: {0: 2279644, 1: 2280105, 11: 2280105, 4130: 2306070, 4132: 2315068, 4133: 2315446}
[2026-03-15 20:39:05] 2026-03-16 00:37:56,997 | INFO     | --------------------------------------------------
[2026-03-15 20:39:05] 2026-03-16 00:37:56,997 | INFO     | 
[2026-03-15 20:39:05] 2026-03-16 00:37:56,997 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-03-15 20:39:05] 2026-03-16 00:37:57,015 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-15 20:39:05] 2026-03-16 00:37:57,015 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-15 20:39:05] 2026-03-16 00:37:57,015 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-15 20:39:05] 2026-03-16 00:37:57,015 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-15 20:39:05] 2026-03-16 00:37:57,015 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-15 20:39:05] 2026-03-16 00:37:57,015 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-15 20:39:05] 2026-03-16 00:37:57,016 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-15 20:39:05] 2026-03-16 00:37:57,016 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-15 20:39:05] 2026-03-16 00:37:57,016 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-15 20:39:05] 2026-03-16 00:37:57,016 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-15 20:39:05] 2026-03-16 00:37:57,016 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-15 20:39:05] 2026-03-16 00:37:57,016 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-15 20:39:05] 2026-03-16 00:37:57,016 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-15 20:39:05] 2026-03-16 00:37:57,016 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-15 20:39:05] 2026-03-16 00:37:57,017 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-15 20:39:05] 2026-03-16 00:37:57,017 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-15 20:39:05] 2026-03-16 00:37:57,017 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-15 20:39:05] 2026-03-16 00:37:57,017 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-15 20:39:05] 2026-03-16 00:37:57,017 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-15 20:39:05] 2026-03-16 00:37:57,017 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-15 20:39:05] 2026-03-16 00:37:57,017 | INFO     | job 7056259503 has completed (purged errors)
[2026-03-15 20:39:05] 2026-03-16 00:37:57,018 | INFO     | overall cleanup function is called
[2026-03-15 20:39:05] 2026-03-16 00:37:58,026 | INFO     | --- collectZombieJob: --- 10, [2045535]
[2026-03-15 20:39:05] 2026-03-16 00:37:58,026 | INFO     | zombie collector waiting for pid 2045535
[2026-03-15 20:39:05] 2026-03-16 00:37:58,026 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-15 20:39:05] 2026-03-16 00:37:58,026 | INFO     | collected zombie processes
[2026-03-15 20:39:05] 2026-03-16 00:37:58,026 | INFO     | will attempt to kill all subprocesses of pid=2045535
[2026-03-15 20:39:05] 2026-03-16 00:37:58,368 | INFO     | process IDs to be killed: [2045535] (in reverse order)
[2026-03-15 20:39:05] 2026-03-16 00:37:58,463 | WARNING  | found no corresponding commands to process id(s)
[2026-03-15 20:39:05] 2026-03-16 00:37:58,464 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-15 20:39:05] 2026-03-16 00:37:58,475 | INFO     | did not find any defunct processes belonging to 2045535
[2026-03-15 20:39:05] 2026-03-16 00:37:58,486 | INFO     | did not find any defunct processes belonging to 2045535
[2026-03-15 20:39:05] 2026-03-16 00:37:58,486 | INFO     | ready for new job
[2026-03-15 20:39:05] 2026-03-16 00:37:58,486 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-15 20:39:05] 2026-03-16 00:37:58,488 | INFO     | **************************************
[2026-03-15 20:39:05] 2026-03-16 00:37:58,488 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-15 20:39:05] 2026-03-16 00:37:58,488 | INFO     | **************************************
[2026-03-15 20:39:05] 2026-03-16 00:37:58,488 | INFO     | 
[2026-03-15 20:39:05] 2026-03-16 00:37:58,490 | INFO     | architecture information:
[2026-03-15 20:39:05] 2026-03-16 00:37:58,490 | INFO     | executing command: cat /etc/os-release
[2026-03-15 20:39:05] 2026-03-16 00:37:58,504 | INFO     | cat /etc/os-release:
[2026-03-15 20:39:05] NAME="CentOS Linux"
[2026-03-15 20:39:05] VERSION="7 (Core)"
[2026-03-15 20:39:05] ID="centos"
[2026-03-15 20:39:05] ID_LIKE="rhel fedora"
[2026-03-15 20:39:05] VERSION_ID="7"
[2026-03-15 20:39:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-15 20:39:05] ANSI_COLOR="0;31"
[2026-03-15 20:39:05] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-15 20:39:05] HOME_URL="https://www.centos.org/"
[2026-03-15 20:39:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-15 20:39:05] 
[2026-03-15 20:39:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-15 20:39:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-15 20:39:05] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-15 20:39:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-15 20:39:05] 
[2026-03-15 20:39:05] 2026-03-16 00:37:58,504 | INFO     | **************************************
[2026-03-15 20:39:05] 2026-03-16 00:37:59,007 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-03-15 20:39:05] 2026-03-16 00:37:59,021 | INFO     | sufficient remaining disk space (76084674560 B)
[2026-03-15 20:39:05] 2026-03-16 00:37:59,021 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-15 20:39:05] 2026-03-16 00:37:59,021 | INFO     | current server update state: UPDATING_FINAL
[2026-03-15 20:39:05] 2026-03-16 00:37:59,021 | INFO     | update_server=False
[2026-03-15 20:39:05] 2026-03-16 00:37:59,022 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-15 20:39:05] 2026-03-16 00:37:59,022 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-15 20:39:05] 2026-03-16 00:37:59,111 | INFO     | all payload control threads have been joined
[2026-03-15 20:39:05] 2026-03-16 00:37:59,259 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-15 20:39:05] 2026-03-16 00:37:59,260 | INFO     | aborting loop
[2026-03-15 20:39:05] 2026-03-16 00:37:59,722 | INFO     | all job control threads have been joined
[2026-03-15 20:39:05] 2026-03-16 00:37:59,795 | INFO     | all data control threads have been joined
[2026-03-15 20:39:05] 2026-03-16 00:38:00,027 | INFO     | [job] retrieve thread has finished
[2026-03-15 20:39:05] 2026-03-16 00:38:00,116 | INFO     | [payload] control thread has finished
[2026-03-15 20:39:05] 2026-03-16 00:38:00,140 | INFO     | [job] validate thread has finished
[2026-03-15 20:39:05] 2026-03-16 00:38:00,197 | INFO     | [data] copytool_in thread has finished
[2026-03-15 20:39:05] 2026-03-16 00:38:00,265 | INFO     | [job] job monitor thread has finished
[2026-03-15 20:39:05] 2026-03-16 00:38:00,319 | INFO     | [payload] execute_payloads thread has finished
[2026-03-15 20:39:05] 2026-03-16 00:38:00,638 | INFO     | [payload] failed_post thread has finished
[2026-03-15 20:39:05] 2026-03-16 00:38:00,702 | INFO     | [payload] validate_pre thread has finished
[2026-03-15 20:39:05] 2026-03-16 00:38:00,727 | INFO     | [job] control thread has finished
[2026-03-15 20:39:05] 2026-03-16 00:38:00,801 | INFO     | [data] control thread has finished
[2026-03-15 20:39:05] 2026-03-16 00:38:00,804 | INFO     | [job] create_data_payload thread has finished
[2026-03-15 20:39:05] 2026-03-16 00:38:01,027 | INFO     | [data] copytool_out thread has finished
[2026-03-15 20:39:05] 2026-03-16 00:38:01,152 | INFO     | [payload] validate_post thread has finished
[2026-03-15 20:39:05] 2026-03-16 00:38:01,431 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-15 20:39:05] 2026-03-16 00:38:01,508 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-15 20:39:05] 2026-03-16 00:38:02,096 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-15 20:39:05] 2026-03-16 00:38:02,513 | INFO     | [job] queue monitor thread has finished
[2026-03-15 20:39:05] 2026-03-16 00:38:06,102 | INFO     | [data] queue_monitor thread has finished
[2026-03-15 20:39:05] 2026-03-16 00:38:30,362 | INFO     | PID=2041072 has CPU usage=6.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-15 20:39:05] 2026-03-16 00:38:30,362 | INFO     | .. there are 28 such processes running
[2026-03-15 20:39:05] 2026-03-16 00:38:30,363 | INFO     | found 0 job(s) in 20 queues
[2026-03-15 20:39:05] 2026-03-16 00:38:30,363 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-15 20:39:05] 2026-03-16 00:38:30,364 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-15 20:39:05] 2026-03-16 00:38:58,801 | INFO     | [monitor] cgroup control has ended
[2026-03-15 20:39:05] 2026-03-16 00:38:59,870 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139913050470208)>', '<ExcThread(monitor, started 139912544233216)>']
[2026-03-15 20:39:05] 2026-03-16 00:39:00,506 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-15 20:39:05] 2026-03-16 00:39:00,506 | INFO     | [monitor] control thread has ended
[2026-03-15 20:39:05] 2026-03-16 00:39:04,896 | INFO     | all workflow threads have been joined
[2026-03-15 20:39:05] 2026-03-16 00:39:04,896 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-15 20:39:05] 2026-03-16 00:39:04,896 | INFO     | traces error code: 0
[2026-03-15 20:39:05] 2026-03-16 00:39:04,897 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-15 20:39:05] 2026-03-16 00:39:05,002 [wrapper] ==== pilot stdout END ====
[2026-03-15 20:39:05] 2026-03-16 00:39:05,004 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-15 20:39:05] 2026-03-16 00:39:05,007 [wrapper] pilotpid: 2041072
[2026-03-15 20:39:05] 2026-03-16 00:39:05,009 [wrapper] Pilot exit status: 0
[2026-03-15 20:39:05] 2026-03-16 00:39:05,018 [wrapper] pandaids: 7056259503
[2026-03-15 20:39:05] 2026-03-16 00:39:05,089 [wrapper] cleanup supervisor_pilot 2277944 2041073
[2026-03-15 20:39:05] 2026-03-16 00:39:05,092 [wrapper] Test setup, not cleaning
[2026-03-15 20:39:05] 2026-03-16 00:39:05,095 [wrapper] apfmon messages muted
[2026-03-15 20:39:05] 2026-03-16 00:39:05,098 [wrapper] ==== wrapper stdout END ====
[2026-03-15 20:39:05] 2026-03-16 00:39:05,101 [wrapper] ==== wrapper stderr END ====
[2026-03-15 20:39:05]  *** Error codes and diagnostics ***
[2026-03-15 20:39:05]     "exeErrorCode": 0,
[2026-03-15 20:39:05]     "exeErrorDiag": "",
[2026-03-15 20:39:05]     "pilotErrorCode": 0,
[2026-03-15 20:39:05]     "pilotErrorDiag": "",
[2026-03-15 20:39:05]  *** Listing of results directory ***
[2026-03-15 20:39:05] total 611456
[2026-03-15 20:39:05] -rw-r--r--. 1 boincer umatlas    585013 Mar 15 19:08 pilot3.tar.gz
[2026-03-15 20:39:05] -rwx------. 1 boincer umatlas     36322 Mar 15 19:27 runpilot2-wrapper.sh
[2026-03-15 20:39:05] -rw-r--r--. 1 boincer umatlas      5111 Mar 15 19:27 queuedata.json
[2026-03-15 20:39:05] -rw-r--r--. 1 boincer umatlas       100 Mar 15 19:28 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-15 20:39:05] -rwxr-xr-x. 1 boincer umatlas      7986 Mar 15 19:28 run_atlas
[2026-03-15 20:39:05] -rw-r--r--. 1 boincer umatlas       105 Mar 15 19:28 job.xml
[2026-03-15 20:39:05] -rw-r--r--. 2 boincer umatlas 438893082 Mar 15 19:28 EVNT.46701403._001485.pool.root.1
[2026-03-15 20:39:05] -rw-r--r--. 2 boincer umatlas    597535 Mar 15 19:28 input.tar.gz
[2026-03-15 20:39:05] -rw-r--r--. 2 boincer umatlas     15845 Mar 15 19:28 start_atlas.sh
[2026-03-15 20:39:05] drwxrwx--x. 2 boincer umatlas      4096 Mar 15 19:28 shared
[2026-03-15 20:39:05] -rw-r--r--. 1 boincer umatlas         0 Mar 15 19:28 boinc_lockfile
[2026-03-15 20:39:05] -rw-r--r--. 1 boincer umatlas      2561 Mar 15 19:28 pandaJob.out
[2026-03-15 20:39:05] -rw-------. 1 boincer umatlas        57 Mar 15 19:28 setup.sh.local
[2026-03-15 20:39:05] -rw-------. 1 boincer umatlas   1006471 Mar 15 19:28 agis_schedconf.cvmfs.json
[2026-03-15 20:39:05] -rw-------. 1 boincer umatlas   1511579 Mar 15 19:28 agis_ddmendpoints.agis.ALL.json
[2026-03-15 20:39:05] -rw-------. 1 boincer umatlas       438 Mar 15 19:28 workernode_map.json
[2026-03-15 20:39:05] drwx------. 5 boincer umatlas      4096 Mar 15 19:28 pilot3
[2026-03-15 20:39:05] -rw-r--r--. 1 boincer umatlas      6658 Mar 15 20:31 init_data.xml
[2026-03-15 20:39:05] -rw-r--r--. 1 boincer umatlas       530 Mar 15 20:37 boinc_task_state.xml
[2026-03-15 20:39:05] -rw-------. 1 boincer umatlas 181271558 Mar 15 20:37 HITS.48955010._052672.pool.root.1
[2026-03-15 20:39:05] -rw-------. 1 boincer umatlas      1036 Mar 15 20:37 memory_monitor_summary.json
[2026-03-15 20:39:05] -rw-------. 1 boincer umatlas    400922 Mar 15 20:37 log.48955010._052672.job.log.tgz.1
[2026-03-15 20:39:05] -rw-------. 1 boincer umatlas      6382 Mar 15 20:37 heartbeat.json
[2026-03-15 20:39:05] -rw-------. 1 boincer umatlas        95 Mar 15 20:38 pilot_heartbeat.json
[2026-03-15 20:39:05] -rw-r--r--. 1 boincer umatlas      8192 Mar 15 20:38 boinc_mmap_file
[2026-03-15 20:39:05] -rw-r--r--. 1 boincer umatlas        27 Mar 15 20:38 wrapper_checkpoint.txt
[2026-03-15 20:39:05] -rw-------. 1 boincer umatlas      4820 Mar 15 20:39 pilotlog.txt
[2026-03-15 20:39:05] -rw-------. 1 boincer umatlas    611436 Mar 15 20:39 log.48955010._052672.job.log.1
[2026-03-15 20:39:05] -rw-------. 1 boincer umatlas       357 Mar 15 20:39 output.list
[2026-03-15 20:39:05] -rw-r--r--. 1 boincer umatlas       620 Mar 15 20:39 runtime_log
[2026-03-15 20:39:05] -rw-------. 1 boincer umatlas   1034240 Mar 15 20:39 result.tar.gz
[2026-03-15 20:39:05] -rw-------. 1 boincer umatlas       651 Mar 15 20:39 XAKLDmE39L9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmUcvLDmBy2PCo.diag
[2026-03-15 20:39:05] -rw-r--r--. 1 boincer umatlas      9328 Mar 15 20:39 runtime_log.err
[2026-03-15 20:39:05] -rw-r--r--. 1 boincer umatlas     21338 Mar 15 20:39 stderr.txt
[2026-03-15 20:39:05] HITS file was successfully produced:
[2026-03-15 20:39:05] -rw-------. 1 boincer umatlas 181271558 Mar 15 20:37 shared/HITS.pool.root.1
[2026-03-15 20:39:05]  *** Contents of shared directory: ***
[2026-03-15 20:39:05] total 607248
[2026-03-15 20:39:05] -rw-r--r--. 2 boincer umatlas 438893082 Mar 15 19:28 ATLAS.root_0
[2026-03-15 20:39:05] -rw-r--r--. 2 boincer umatlas    597535 Mar 15 19:28 input.tar.gz
[2026-03-15 20:39:05] -rw-r--r--. 2 boincer umatlas     15845 Mar 15 19:28 start_atlas.sh
[2026-03-15 20:39:05] -rw-------. 1 boincer umatlas 181271558 Mar 15 20:37 HITS.pool.root.1
[2026-03-15 20:39:05] -rw-------. 1 boincer umatlas   1034240 Mar 15 20:39 result.tar.gz
20:39:06 (2037361): run_atlas exited; CPU time 42409.109147
20:39:06 (2037361): called boinc_finish(0)

</stderr_txt>
]]>

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