Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:13:58 (821535): wrapper (7.7.26015): starting
14:13:58 (821535): wrapper: running run_atlas (--nthreads 4)
[2026-03-16 14:13:58] Arguments: --nthreads 4
[2026-03-16 14:13:58] Threads: 4
[2026-03-16 14:13:58] Checking for CVMFS
[2026-03-16 14:13:58] No cvmfs_config command found, will try listing directly
[2026-03-16 14:13:58] CVMFS is ok
[2026-03-16 14:13:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-16 14:13:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-16 14:13:58] Further information can be found at the LHC@home message board.
[2026-03-16 14:13:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-16 14:13:58] Checking for apptainer binary...
[2026-03-16 14:13:58] which: no apptainer in ((null))
[2026-03-16 14:13:58] apptainer is not installed, using version from CVMFS
[2026-03-16 14:13:58] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-16 14:13:58] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot32/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut01.grid.cesnet.cz
[2026-03-16 14:13:58] apptainer works
[2026-03-16 14:13:58] Set ATHENA_PROC_NUMBER=4
[2026-03-16 14:13:58] Set ATHENA_CORE_NUMBER=4
[2026-03-16 14:13:58] Starting ATLAS job with PandaID=7056217351
[2026-03-16 14:13:58] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot32/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-16 17:55:51]  *** The last 200 lines of the pilot log: ***
[2026-03-16 17:55:51] 2026-03-16 16:50:42,088 | INFO     | total number of processed events: 400 (read)
[2026-03-16 17:55:51] 2026-03-16 16:50:42,100 | INFO     | using path: /var/lib/boinc/var/slot32/slots/0/PanDA_Pilot-7056217351/memory_monitor_summary.json (trf name=prmon)
[2026-03-16 17:55:51] 2026-03-16 16:50:42,101 | INFO     | extracted standard info from prmon json
[2026-03-16 17:55:51] 2026-03-16 16:50:42,101 | INFO     | extracted standard memory fields from prmon json
[2026-03-16 17:55:51] 2026-03-16 16:50:42,101 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-16 17:55:51] 2026-03-16 16:50:42,101 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-16 17:55:51] 2026-03-16 16:50:42,101 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-16 17:55:51] 2026-03-16 16:50:42,105 | INFO     | fitting pss+swap vs Time
[2026-03-16 17:55:51] 2026-03-16 16:50:42,106 | INFO     | sum of square deviations: 2996454322.0
[2026-03-16 17:55:51] 2026-03-16 16:50:42,107 | INFO     | sum of deviations: 23966749391.0
[2026-03-16 17:55:51] 2026-03-16 16:50:42,107 | INFO     | mean x: 1773673341.0
[2026-03-16 17:55:51] 2026-03-16 16:50:42,108 | INFO     | mean y: 2358762.6854460095
[2026-03-16 17:55:51] 2026-03-16 16:50:42,108 | INFO     | intersect: -14184136306.884542
[2026-03-16 17:55:51] 2026-03-16 16:50:42,108 | INFO     | chi2: 2.2243855228079354
[2026-03-16 17:55:51] 2026-03-16 16:50:42,108 | INFO     | sum of square deviations: 2790348132.0
[2026-03-16 17:55:51] 2026-03-16 16:50:42,110 | INFO     | sum of deviations: 36999430989.00001
[2026-03-16 17:55:51] 2026-03-16 16:50:42,110 | INFO     | mean x: 1773673188.5
[2026-03-16 17:55:51] 2026-03-16 16:50:42,110 | INFO     | mean y: 2368211.5384615385
[2026-03-16 17:55:51] 2026-03-16 16:50:42,110 | INFO     | intersect: -23516166261.75978
[2026-03-16 17:55:51] 2026-03-16 16:50:42,110 | INFO     | chi2: 1.411774662600955
[2026-03-16 17:55:51] 2026-03-16 16:50:42,111 | INFO     | current chi2=1.411774662600955 (change=36.53192541826956 %)
[2026-03-16 17:55:51] 2026-03-16 16:50:42,111 | INFO     | sum of square deviations: 2593916542.0
[2026-03-16 17:55:51] 2026-03-16 16:50:42,112 | INFO     | sum of deviations: 36002431495.0
[2026-03-16 17:55:51] 2026-03-16 16:50:42,112 | INFO     | mean x: 1773673036.0
[2026-03-16 17:55:51] 2026-03-16 16:50:42,112 | INFO     | mean y: 2367437.369458128
[2026-03-16 17:55:51] 2026-03-16 16:50:42,113 | INFO     | intersect: -24615441555.00585
[2026-03-16 17:55:51] 2026-03-16 16:50:42,113 | INFO     | chi2: 1.4119941620375869
[2026-03-16 17:55:51] 2026-03-16 16:50:42,113 | INFO     | current chi2=1.4119941620375869 (change=-0.01554776710806013 %)
[2026-03-16 17:55:51] 2026-03-16 16:50:42,113 | INFO     | right removable region: 202
[2026-03-16 17:55:51] 2026-03-16 16:50:42,113 | INFO     | sum of square deviations: 2790348132.0
[2026-03-16 17:55:51] 2026-03-16 16:50:42,115 | INFO     | sum of deviations: -6143150332.499998
[2026-03-16 17:55:51] 2026-03-16 16:50:42,115 | INFO     | mean x: 1773673493.5
[2026-03-16 17:55:51] 2026-03-16 16:50:42,115 | INFO     | mean y: 2380803.466346154
[2026-03-16 17:55:51] 2026-03-16 16:50:42,115 | INFO     | intersect: 3907249442.0369825
[2026-03-16 17:55:51] 2026-03-16 16:50:42,116 | INFO     | chi2: 0.8515197701641379
[2026-03-16 17:55:51] 2026-03-16 16:50:42,116 | INFO     | current chi2=0.8515197701641379 (change=61.71887645226045 %)
[2026-03-16 17:55:51] 2026-03-16 16:50:42,116 | INFO     | sum of square deviations: 2593916542.0
[2026-03-16 17:55:51] 2026-03-16 16:50:42,117 | INFO     | sum of deviations: -9676777334.0
[2026-03-16 17:55:51] 2026-03-16 16:50:42,117 | INFO     | mean x: 1773673646.0
[2026-03-16 17:55:51] 2026-03-16 16:50:42,118 | INFO     | mean y: 2383525.5270935963
[2026-03-16 17:55:51] 2026-03-16 16:50:42,118 | INFO     | intersect: 6619190449.581916
[2026-03-16 17:55:51] 2026-03-16 16:50:42,118 | INFO     | chi2: 0.8365662098955147
[2026-03-16 17:55:51] 2026-03-16 16:50:42,118 | INFO     | current chi2=0.8365662098955147 (change=1.7561025348525776 %)
[2026-03-16 17:55:51] 2026-03-16 16:50:42,118 | INFO     | left removable region: 20
[2026-03-16 17:55:51] 2026-03-16 16:50:42,118 | INFO     | sum of square deviations: 1869302025.5
[2026-03-16 17:55:51] 2026-03-16 16:50:42,120 | INFO     | sum of deviations: 1133100010.0000005
[2026-03-16 17:55:51] 2026-03-16 16:50:42,120 | INFO     | mean x: 1773673615.5
[2026-03-16 17:55:51] 2026-03-16 16:50:42,120 | INFO     | mean y: 2395946.6153846155
[2026-03-16 17:55:51] 2026-03-16 16:50:42,120 | INFO     | intersect: -1072737747.1611576
[2026-03-16 17:55:51] 2026-03-16 16:50:42,120 | INFO     | chi2: 0.003971350352794073
[2026-03-16 17:55:51] 2026-03-16 16:50:42,120 | INFO     | current memory leak: 0.61 B/s (using 182 data points, chi2=0.00)
[2026-03-16 17:55:51] 2026-03-16 16:50:42,121 | INFO     | could have reported an average CPU frequency of 2611 MHz (11 samples)
[2026-03-16 17:55:51] 2026-03-16 16:50:42,121 | INFO     | ..............................
[2026-03-16 17:55:51] 2026-03-16 16:50:42,121 | INFO     | . Timing measurements:
[2026-03-16 17:55:51] 2026-03-16 16:50:42,121 | INFO     | . get job = 0 s
[2026-03-16 17:55:51] 2026-03-16 16:50:42,121 | INFO     | . initial setup = 5 s
[2026-03-16 17:55:51] 2026-03-16 16:50:42,121 | INFO     | . payload setup = 5 s
[2026-03-16 17:55:51] 2026-03-16 16:50:42,121 | INFO     | . stage-in = 0 s
[2026-03-16 17:55:51] 2026-03-16 16:50:42,122 | INFO     | . payload execution = 12962 s
[2026-03-16 17:55:51] 2026-03-16 16:50:42,122 | INFO     | . stage-out = 1 s
[2026-03-16 17:55:51] 2026-03-16 16:50:42,122 | INFO     | . log creation = 0 s
[2026-03-16 17:55:51] 2026-03-16 16:50:42,122 | INFO     | ..............................
[2026-03-16 17:55:51] 2026-03-16 16:50:42,216 | INFO     | 
[2026-03-16 17:55:51] 2026-03-16 16:50:42,216 | INFO     | job summary report
[2026-03-16 17:55:51] 2026-03-16 16:50:42,216 | INFO     | --------------------------------------------------
[2026-03-16 17:55:51] 2026-03-16 16:50:42,216 | INFO     | PanDA job id: 7056217351
[2026-03-16 17:55:51] 2026-03-16 16:50:42,216 | INFO     | task id: 48967085
[2026-03-16 17:55:51] 2026-03-16 16:50:42,216 | INFO     | errors: (none)
[2026-03-16 17:55:51] 2026-03-16 16:50:42,216 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-16 17:55:51] 2026-03-16 16:50:42,216 | INFO     | pilot state: finished 
[2026-03-16 17:55:51] 2026-03-16 16:50:42,217 | INFO     | transexitcode: 0
[2026-03-16 17:55:51] 2026-03-16 16:50:42,217 | INFO     | exeerrorcode: 0
[2026-03-16 17:55:51] 2026-03-16 16:50:42,217 | INFO     | exeerrordiag: 
[2026-03-16 17:55:51] 2026-03-16 16:50:42,217 | INFO     | exitcode: 0
[2026-03-16 17:55:51] 2026-03-16 16:50:42,217 | INFO     | exitmsg: OK
[2026-03-16 17:55:51] 2026-03-16 16:50:42,217 | INFO     | cpuconsumptiontime: 49771 s
[2026-03-16 17:55:51] 2026-03-16 16:50:42,217 | INFO     | nevents: 400
[2026-03-16 17:55:51] 2026-03-16 16:50:42,217 | INFO     | neventsw: 0
[2026-03-16 17:55:51] 2026-03-16 16:50:42,217 | INFO     | pid: 830589
[2026-03-16 17:55:51] 2026-03-16 16:50:42,217 | INFO     | pgrp: 830589
[2026-03-16 17:55:51] 2026-03-16 16:50:42,217 | INFO     | corecount: 4
[2026-03-16 17:55:51] 2026-03-16 16:50:42,217 | INFO     | event service: False
[2026-03-16 17:55:51] 2026-03-16 16:50:42,218 | INFO     | sizes: {0: 2279766, 1: 2280283, 12: 2280283, 12971: 2310397, 12973: 2319417, 12974: 2319473, 12977: 2319795}
[2026-03-16 17:55:51] 2026-03-16 16:50:42,218 | INFO     | --------------------------------------------------
[2026-03-16 17:55:51] 2026-03-16 16:50:42,218 | INFO     | 
[2026-03-16 17:55:51] 2026-03-16 16:50:42,218 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot32/slots/0
[2026-03-16 17:55:51] 2026-03-16 16:50:42,241 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-16 17:55:51] 2026-03-16 16:50:42,242 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-16 17:55:51] 2026-03-16 16:50:42,242 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-16 17:55:51] 2026-03-16 16:50:42,242 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-16 17:55:51] 2026-03-16 16:50:42,242 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-16 17:55:51] 2026-03-16 16:50:42,242 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-16 17:55:51] 2026-03-16 16:50:42,242 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-16 17:55:51] 2026-03-16 16:50:42,242 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-16 17:55:51] 2026-03-16 16:50:42,242 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-16 17:55:51] 2026-03-16 16:50:42,242 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-16 17:55:51] 2026-03-16 16:50:42,242 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-16 17:55:51] 2026-03-16 16:50:42,243 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-16 17:55:51] 2026-03-16 16:50:42,243 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-16 17:55:51] 2026-03-16 16:50:42,243 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-16 17:55:51] 2026-03-16 16:50:42,243 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-16 17:55:51] 2026-03-16 16:50:42,243 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-16 17:55:51] 2026-03-16 16:50:42,243 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-16 17:55:51] 2026-03-16 16:50:42,243 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-16 17:55:51] 2026-03-16 16:50:42,243 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-16 17:55:51] 2026-03-16 16:50:42,243 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-16 17:55:51] 2026-03-16 16:50:42,243 | INFO     | job 7056217351 has completed (purged errors)
[2026-03-16 17:55:51] 2026-03-16 16:50:42,244 | INFO     | overall cleanup function is called
[2026-03-16 17:55:51] 2026-03-16 16:50:43,252 | INFO     | --- collectZombieJob: --- 10, [830589]
[2026-03-16 17:55:51] 2026-03-16 16:50:43,252 | INFO     | zombie collector waiting for pid 830589
[2026-03-16 17:55:51] 2026-03-16 16:50:43,252 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-16 17:55:51] 2026-03-16 16:50:43,253 | INFO     | collected zombie processes
[2026-03-16 17:55:51] 2026-03-16 16:50:43,253 | INFO     | will attempt to kill all subprocesses of pid=830589
[2026-03-16 17:55:51] 2026-03-16 16:50:43,630 | INFO     | process IDs to be killed: [830589] (in reverse order)
[2026-03-16 17:55:51] 2026-03-16 16:50:43,755 | WARNING  | found no corresponding commands to process id(s)
[2026-03-16 17:55:51] 2026-03-16 16:50:43,756 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-16 17:55:51] 2026-03-16 16:50:43,768 | INFO     | did not find any defunct processes belonging to 830589
[2026-03-16 17:55:51] 2026-03-16 16:50:43,780 | INFO     | did not find any defunct processes belonging to 830589
[2026-03-16 17:55:51] 2026-03-16 16:50:43,780 | INFO     | ready for new job
[2026-03-16 17:55:51] 2026-03-16 16:50:43,780 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-16 17:55:51] 2026-03-16 16:50:43,782 | INFO     | **************************************
[2026-03-16 17:55:51] 2026-03-16 16:50:43,783 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-16 17:55:51] 2026-03-16 16:50:43,783 | INFO     | **************************************
[2026-03-16 17:55:51] 2026-03-16 16:50:43,783 | INFO     | 
[2026-03-16 17:55:51] 2026-03-16 16:50:43,787 | INFO     | architecture information:
[2026-03-16 17:55:51] 2026-03-16 16:50:43,787 | INFO     | executing command: cat /etc/os-release
[2026-03-16 17:55:51] 2026-03-16 16:50:43,802 | INFO     | cat /etc/os-release:
[2026-03-16 17:55:51] NAME="CentOS Linux"
[2026-03-16 17:55:51] VERSION="7 (Core)"
[2026-03-16 17:55:51] ID="centos"
[2026-03-16 17:55:51] ID_LIKE="rhel fedora"
[2026-03-16 17:55:51] VERSION_ID="7"
[2026-03-16 17:55:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-16 17:55:51] ANSI_COLOR="0;31"
[2026-03-16 17:55:51] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-16 17:55:51] HOME_URL="https://www.centos.org/"
[2026-03-16 17:55:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-16 17:55:51] 
[2026-03-16 17:55:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-16 17:55:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-16 17:55:51] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-16 17:55:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-16 17:55:51] 
[2026-03-16 17:55:51] 2026-03-16 16:50:43,802 | INFO     | **************************************
[2026-03-16 17:55:51] 2026-03-16 16:50:44,305 | INFO     | executing command: df -mP /var/lib/boinc/var/slot32/slots/0
[2026-03-16 17:55:51] 2026-03-16 16:50:44,323 | INFO     | sufficient remaining disk space (35979788288 B)
[2026-03-16 17:55:51] 2026-03-16 16:50:44,323 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-16 17:55:51] 2026-03-16 16:50:44,324 | INFO     | current server update state: UPDATING_FINAL
[2026-03-16 17:55:51] 2026-03-16 16:50:44,324 | INFO     | update_server=False
[2026-03-16 17:55:51] 2026-03-16 16:50:44,324 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-16 17:55:51] 2026-03-16 16:50:44,324 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-16 17:55:51] 2026-03-16 16:50:44,541 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-16 17:55:51] 2026-03-16 16:50:44,542 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-16 17:55:51] 2026-03-16 16:50:44,542 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-16 17:55:51] 2026-03-16 16:50:44,542 | INFO     | will abort loop
[2026-03-16 17:55:51] 2026-03-16 16:50:44,987 | INFO     | all payload control threads have been joined
[2026-03-16 17:55:51] 2026-03-16 16:50:45,100 | INFO     | all data control threads have been joined
[2026-03-16 17:55:51] 2026-03-16 16:50:45,115 | INFO     | all job control threads have been joined
[2026-03-16 17:55:51] 2026-03-16 16:50:45,210 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-16 17:55:51] 2026-03-16 16:50:45,329 | INFO     | [job] retrieve thread has finished
[2026-03-16 17:55:51] 2026-03-16 16:50:45,547 | INFO     | [job] job monitor thread has finished
[2026-03-16 17:55:51] 2026-03-16 16:50:45,796 | INFO     | [payload] failed_post thread has finished
[2026-03-16 17:55:51] 2026-03-16 16:50:45,803 | INFO     | [payload] validate_pre thread has finished
[2026-03-16 17:55:51] 2026-03-16 16:50:45,825 | INFO     | [job] create_data_payload thread has finished
[2026-03-16 17:55:51] 2026-03-16 16:50:45,987 | INFO     | [payload] control thread has finished
[2026-03-16 17:55:51] 2026-03-16 16:50:46,078 | INFO     | [payload] execute_payloads thread has finished
[2026-03-16 17:55:51] 2026-03-16 16:50:46,097 | INFO     | [data] copytool_in thread has finished
[2026-03-16 17:55:51] 2026-03-16 16:50:46,100 | INFO     | [data] control thread has finished
[2026-03-16 17:55:51] 2026-03-16 16:50:46,120 | INFO     | [job] control thread has finished
[2026-03-16 17:55:51] 2026-03-16 16:50:46,330 | INFO     | [data] copytool_out thread has finished
[2026-03-16 17:55:51] 2026-03-16 16:50:46,737 | INFO     | [job] validate thread has finished
[2026-03-16 17:55:51] 2026-03-16 16:50:46,770 | INFO     | [payload] validate_post thread has finished
[2026-03-16 17:55:51] 2026-03-16 16:50:47,226 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-16 17:55:51] 2026-03-16 16:50:48,231 | INFO     | [job] queue monitor thread has finished
[2026-03-16 17:55:51] 2026-03-16 16:50:49,216 | INFO     | [data] queue_monitor thread has finished
[2026-03-16 17:55:51] 2026-03-16 16:50:54,921 | INFO     | job.realtimelogging is not enabled
[2026-03-16 17:55:51] 2026-03-16 16:50:55,926 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-16 17:55:51] 2026-03-16 16:51:14,746 | INFO     | PID=825435 has CPU usage=5.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-16 17:55:51] 2026-03-16 16:51:14,746 | INFO     | .. there are 10 such processes running
[2026-03-16 17:55:51] 2026-03-16 16:51:14,747 | INFO     | found 0 job(s) in 20 queues
[2026-03-16 17:55:51] 2026-03-16 16:51:14,747 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-16 17:55:51] 2026-03-16 16:51:14,747 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-16 17:55:51] 2026-03-16 16:51:33,589 | INFO     | [monitor] cgroup control has ended
[2026-03-16 17:55:51] 2026-03-16 16:51:35,660 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22592438363968)>', '<ExcThread(monitor, started 22592202491648)>']
[2026-03-16 17:55:51] 2026-03-16 16:51:35,850 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-16 17:55:51] 2026-03-16 16:51:35,850 | INFO     | [monitor] control thread has ended
[2026-03-16 17:55:51] 2026-03-16 16:51:40,685 | INFO     | all workflow threads have been joined
[2026-03-16 17:55:51] 2026-03-16 16:51:40,685 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-16 17:55:51] 2026-03-16 16:51:40,685 | INFO     | traces error code: 0
[2026-03-16 17:55:51] 2026-03-16 16:51:40,685 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-16 17:55:51] 2026-03-16 16:51:40,821 [wrapper] ==== pilot stdout END ====
[2026-03-16 17:55:51] 2026-03-16 16:51:40,824 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-16 17:55:51] 2026-03-16 16:51:40,827 [wrapper] pilotpid: 825435
[2026-03-16 17:55:51] 2026-03-16 16:51:40,830 [wrapper] Pilot exit status: 0
[2026-03-16 17:55:51] 2026-03-16 16:51:40,841 [wrapper] pandaids: 7056217351
[2026-03-16 17:55:51] 2026-03-16 16:51:40,920 [wrapper] cleanup supervisor_pilot 1031655 825436
[2026-03-16 17:55:51] 2026-03-16 16:51:40,924 [wrapper] Test setup, not cleaning
[2026-03-16 17:55:51] 2026-03-16 16:51:40,928 [wrapper] apfmon messages muted
[2026-03-16 17:55:51] 2026-03-16 16:51:40,931 [wrapper] ==== wrapper stdout END ====
[2026-03-16 17:55:51] 2026-03-16 16:51:40,933 [wrapper] ==== wrapper stderr END ====
[2026-03-16 17:55:51]  *** Error codes and diagnostics ***
[2026-03-16 17:55:51]     "exeErrorCode": 0,
[2026-03-16 17:55:51]     "exeErrorDiag": "",
[2026-03-16 17:55:51]     "pilotErrorCode": 0,
[2026-03-16 17:55:51]     "pilotErrorDiag": "",
[2026-03-16 17:55:51]  *** Listing of results directory ***
[2026-03-16 17:55:51] total 416016
[2026-03-16 17:55:51] -rw-r--r--. 1 boinc boinc      5111 Mar 15 23:03 queuedata.json
[2026-03-16 17:55:51] -rw-r--r--. 1 boinc boinc    585013 Mar 15 23:03 pilot3.tar.gz
[2026-03-16 17:55:51] -rwx------. 1 boinc boinc     36322 Mar 15 23:03 runpilot2-wrapper.sh
[2026-03-16 17:55:51] -rw-r--r--. 1 boinc boinc       100 Mar 16 14:13 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-16 17:55:51] -rwxr-xr-x. 1 boinc boinc      7986 Mar 16 14:13 run_atlas
[2026-03-16 17:55:51] -rw-r--r--. 1 boinc boinc       105 Mar 16 14:13 job.xml
[2026-03-16 17:55:51] -rw-r--r--. 1 boinc boinc      6563 Mar 16 14:13 init_data.xml
[2026-03-16 17:55:51] -rw-r--r--. 2 boinc boinc 215881758 Mar 16 14:13 EVNT.48967083._000969.pool.root.1
[2026-03-16 17:55:51] -rw-r--r--. 2 boinc boinc     15845 Mar 16 14:13 start_atlas.sh
[2026-03-16 17:55:51] drwxrwx--x. 2 boinc boinc      4096 Mar 16 14:13 shared
[2026-03-16 17:55:51] -rw-r--r--. 2 boinc boinc    597524 Mar 16 14:13 input.tar.gz
[2026-03-16 17:55:51] -rw-r--r--. 1 boinc boinc         0 Mar 16 14:13 boinc_lockfile
[2026-03-16 17:55:51] -rw-r--r--. 1 boinc boinc      2565 Mar 16 14:13 pandaJob.out
[2026-03-16 17:55:51] -rw-------. 1 boinc boinc   1006429 Mar 16 14:14 agis_schedconf.cvmfs.json
[2026-03-16 17:55:51] -rw-------. 1 boinc boinc       452 Mar 16 14:14 workernode_map.json
[2026-03-16 17:55:51] drwx------. 5 boinc boinc      4096 Mar 16 14:14 pilot3
[2026-03-16 17:55:51] -rw-------. 1 boinc boinc 201729398 Mar 16 17:49 HITS.48967085._024237.pool.root.1
[2026-03-16 17:55:51] -rw-r--r--. 1 boinc boinc       530 Mar 16 17:50 boinc_task_state.xml
[2026-03-16 17:55:51] -rw-------. 1 boinc boinc      1037 Mar 16 17:50 memory_monitor_summary.json
[2026-03-16 17:55:51] -rw-------. 1 boinc boinc   1511579 Mar 16 17:50 agis_ddmendpoints.agis.ALL.json
[2026-03-16 17:55:51] -rw-------. 1 boinc boinc    387862 Mar 16 17:50 log.48967085._024237.job.log.tgz.1
[2026-03-16 17:55:51] -rw-------. 1 boinc boinc      6408 Mar 16 17:50 heartbeat.json
[2026-03-16 17:55:51] -rw-------. 1 boinc boinc        95 Mar 16 17:51 pilot_heartbeat.json
[2026-03-16 17:55:51] -rw-------. 1 boinc boinc      5086 Mar 16 17:51 pilotlog.txt
[2026-03-16 17:55:51] -rw-------. 1 boinc boinc   1837367 Mar 16 17:51 log.48967085._024237.job.log.1
[2026-03-16 17:55:51] -rw-------. 1 boinc boinc       357 Mar 16 17:51 output.list
[2026-03-16 17:55:51] -rw-r--r--. 1 boinc boinc       620 Mar 16 17:51 runtime_log
[2026-03-16 17:55:51] -rw-------. 1 boinc boinc   2242560 Mar 16 17:51 result.tar.gz
[2026-03-16 17:55:51] -rw-r--r--. 1 boinc boinc      9205 Mar 16 17:51 runtime_log.err
[2026-03-16 17:55:51] -rw-------. 1 boinc boinc       661 Mar 16 17:51 WXNNDmaj8L9n9Rq4apOajLDm4fhM0noT9bVooX4SDmQVsLDmkkY3No.diag
[2026-03-16 17:55:51] -rw-r--r--. 1 boinc boinc        27 Mar 16 17:55 wrapper_checkpoint.txt
[2026-03-16 17:55:51] -rw-r--r--. 1 boinc boinc      8192 Mar 16 17:55 boinc_mmap_file
[2026-03-16 17:55:51] -rw-r--r--. 1 boinc boinc     20814 Mar 16 17:55 stderr.txt
[2026-03-16 17:55:51] HITS file was successfully produced:
[2026-03-16 17:55:51] -rw-------. 1 boinc boinc 201729398 Mar 16 17:49 shared/HITS.pool.root.1
[2026-03-16 17:55:51]  *** Contents of shared directory: ***
[2026-03-16 17:55:51] total 410628
[2026-03-16 17:55:51] -rw-r--r--. 2 boinc boinc 215881758 Mar 16 14:13 ATLAS.root_0
[2026-03-16 17:55:51] -rw-r--r--. 2 boinc boinc     15845 Mar 16 14:13 start_atlas.sh
[2026-03-16 17:55:51] -rw-r--r--. 2 boinc boinc    597524 Mar 16 14:13 input.tar.gz
[2026-03-16 17:55:51] -rw-------. 1 boinc boinc 201729398 Mar 16 17:49 HITS.pool.root.1
[2026-03-16 17:55:51] -rw-------. 1 boinc boinc   2242560 Mar 16 17:51 result.tar.gz
17:55:52 (821535): run_atlas exited; CPU time 50303.405886
17:55:52 (821535): called boinc_finish(0)

</stderr_txt>
]]>

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