Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
18:34:09 (26784): wrapper (7.7.26015): starting
18:34:09 (26784): wrapper: running run_atlas (--nthreads 8)
[2026-03-15 18:34:09] Arguments: --nthreads 8
[2026-03-15 18:34:09] Threads: 8
[2026-03-15 18:34:09] Checking for CVMFS
[2026-03-15 18:34:09] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-15 18:34:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-15 18:34:09] Running cvmfs_config stat atlas.cern.ch
[2026-03-15 18:34:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-15 18:34:09] 2.11.2.0 13817 702925 312052 157330 1 50 12299215 18432001 2833 130560 8 394622349 99.736 271968878 24342 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2026-03-15 18:34:09] CVMFS is ok
[2026-03-15 18:34:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-15 18:34:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-15 18:34:09] Further information can be found at the LHC@home message board.
[2026-03-15 18:34:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-15 18:34:09] Checking for apptainer binary...
[2026-03-15 18:34:09] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-15 18:34:09] Running /usr/bin/apptainer --version
[2026-03-15 18:34:09] apptainer version 1.3.2-1.el7
[2026-03-15 18:34:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-15 18:34:10] c-9-29.aglt2.org
[2026-03-15 18:34:10] apptainer works
[2026-03-15 18:34:10] Set ATHENA_PROC_NUMBER=8
[2026-03-15 18:34:10] Set ATHENA_CORE_NUMBER=8
[2026-03-15 18:34:10] Starting ATLAS job with PandaID=7047738854
[2026-03-15 18:34:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-15 23:08:58]  *** The last 200 lines of the pilot log: ***
[2026-03-15 23:08:59] 2026-03-16 03:08:25,883 | INFO     | job 7047738854 has state=finished
[2026-03-15 23:08:59] 2026-03-16 03:08:25,883 | INFO     | preparing for final server update for job 7047738854 in state='finished'
[2026-03-15 23:08:59] 2026-03-16 03:08:25,884 | INFO     | reading metadata from: /tmp/boinchome/slots/3/PanDA_Pilot-7047738854/jobReport.json
[2026-03-15 23:08:59] 2026-03-16 03:08:25,887 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/3/workernode_map.json
[2026-03-15 23:08:59] 2026-03-16 03:08:25,887 | INFO     | this job has now completed (state=finished)
[2026-03-15 23:08:59] 2026-03-16 03:08:25,887 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-15 23:08:59] 2026-03-16 03:08:25,887 | INFO     | log transfer has been attempted: DONE
[2026-03-15 23:08:59] 2026-03-16 03:08:25,888 | INFO     | job 7047738854 has finished - writing final server update
[2026-03-15 23:08:59] 2026-03-16 03:08:25,888 | INFO     | total number of processed events: 400 (read)
[2026-03-15 23:08:59] 2026-03-16 03:08:25,894 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-7047738854/memory_monitor_summary.json (trf name=prmon)
[2026-03-15 23:08:59] 2026-03-16 03:08:25,895 | INFO     | extracted standard info from prmon json
[2026-03-15 23:08:59] 2026-03-16 03:08:25,895 | INFO     | extracted standard memory fields from prmon json
[2026-03-15 23:08:59] 2026-03-16 03:08:25,895 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-15 23:08:59] 2026-03-16 03:08:25,896 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-15 23:08:59] 2026-03-16 03:08:25,896 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-15 23:08:59] 2026-03-16 03:08:25,903 | INFO     | fitting pss+swap vs Time
[2026-03-15 23:08:59] 2026-03-16 03:08:25,904 | INFO     | sum of square deviations: 6035722470.0
[2026-03-15 23:08:59] 2026-03-16 03:08:25,906 | INFO     | sum of deviations: -3532257459.999995
[2026-03-15 23:08:59] 2026-03-16 03:08:25,906 | INFO     | mean x: 1773622260.0
[2026-03-15 23:08:59] 2026-03-16 03:08:25,906 | INFO     | mean y: 2555181.219330855
[2026-03-15 23:08:59] 2026-03-16 03:08:25,907 | INFO     | intersect: 1040523790.6519397
[2026-03-15 23:08:59] 2026-03-16 03:08:25,907 | INFO     | chi2: 1.5484408460393162
[2026-03-15 23:08:59] 2026-03-16 03:08:25,908 | INFO     | sum of square deviations: 5705372090.0
[2026-03-15 23:08:59] 2026-03-16 03:08:25,910 | INFO     | sum of deviations: -3504763387.500005
[2026-03-15 23:08:59] 2026-03-16 03:08:25,910 | INFO     | mean x: 1773622107.5
[2026-03-15 23:08:59] 2026-03-16 03:08:25,910 | INFO     | mean y: 2555193.912878788
[2026-03-15 23:08:59] 2026-03-16 03:08:25,911 | INFO     | intersect: 1092076740.8987122
[2026-03-15 23:08:59] 2026-03-16 03:08:25,911 | INFO     | chi2: 1.548246765575177
[2026-03-15 23:08:59] 2026-03-16 03:08:25,911 | INFO     | current chi2=1.548246765575177 (change=0.012533928217896485 %)
[2026-03-15 23:08:59] 2026-03-16 03:08:25,911 | INFO     | right removable region: 263
[2026-03-15 23:08:59] 2026-03-16 03:08:25,912 | INFO     | sum of square deviations: 5705372090.0
[2026-03-15 23:08:59] 2026-03-16 03:08:25,914 | INFO     | sum of deviations: -42774628772.50003
[2026-03-15 23:08:59] 2026-03-16 03:08:25,915 | INFO     | mean x: 1773622412.5
[2026-03-15 23:08:59] 2026-03-16 03:08:25,915 | INFO     | mean y: 2573136.2916666665
[2026-03-15 23:08:59] 2026-03-16 03:08:25,915 | INFO     | intersect: 13299872432.55429
[2026-03-15 23:08:59] 2026-03-16 03:08:25,915 | INFO     | chi2: 0.1928982717366967
[2026-03-15 23:08:59] 2026-03-16 03:08:25,916 | INFO     | current chi2=0.1928982717366967 (change=87.54241905784764 %)
[2026-03-15 23:08:59] 2026-03-16 03:08:25,916 | INFO     | sum of square deviations: 5387301010.0
[2026-03-15 23:08:59] 2026-03-16 03:08:25,918 | INFO     | sum of deviations: -41728520526.99999
[2026-03-15 23:08:59] 2026-03-16 03:08:25,919 | INFO     | mean x: 1773622565.0
[2026-03-15 23:08:59] 2026-03-16 03:08:25,919 | INFO     | mean y: 2572607.6563706566
[2026-03-15 23:08:59] 2026-03-16 03:08:25,919 | INFO     | intersect: 13740554850.225155
[2026-03-15 23:08:59] 2026-03-16 03:08:25,919 | INFO     | chi2: 0.17639465359944848
[2026-03-15 23:08:59] 2026-03-16 03:08:25,920 | INFO     | current chi2=0.17639465359944848 (change=8.555607050629998 %)
[2026-03-15 23:08:59] 2026-03-16 03:08:25,920 | INFO     | left removable region: 20
[2026-03-15 23:08:59] 2026-03-16 03:08:25,920 | INFO     | sum of square deviations: 4449281562.0
[2026-03-15 23:08:59] 2026-03-16 03:08:25,922 | INFO     | sum of deviations: -25542177908.000008
[2026-03-15 23:08:59] 2026-03-16 03:08:25,922 | INFO     | mean x: 1773622687.0
[2026-03-15 23:08:59] 2026-03-16 03:08:25,923 | INFO     | mean y: 2564850.621399177
[2026-03-15 23:08:59] 2026-03-16 03:08:25,923 | INFO     | intersect: 10184475251.602
[2026-03-15 23:08:59] 2026-03-16 03:08:25,923 | INFO     | chi2: 0.14320227792425083
[2026-03-15 23:08:59] 2026-03-16 03:08:25,923 | INFO     | current memory leak: -5.74 B/s (using 243 data points, chi2=0.14)
[2026-03-15 23:08:59] 2026-03-16 03:08:25,924 | INFO     | could have reported an average CPU frequency of 2999 MHz (13 samples)
[2026-03-15 23:08:59] 2026-03-16 03:08:25,924 | INFO     | ..............................
[2026-03-15 23:08:59] 2026-03-16 03:08:25,924 | INFO     | . Timing measurements:
[2026-03-15 23:08:59] 2026-03-16 03:08:25,925 | INFO     | . get job = 0 s
[2026-03-15 23:08:59] 2026-03-16 03:08:25,925 | INFO     | . initial setup = 6 s
[2026-03-15 23:08:59] 2026-03-16 03:08:25,925 | INFO     | . payload setup = 4 s
[2026-03-15 23:08:59] 2026-03-16 03:08:25,925 | INFO     | . stage-in = 0 s
[2026-03-15 23:08:59] 2026-03-16 03:08:25,925 | INFO     | . payload execution = 16411 s
[2026-03-15 23:08:59] 2026-03-16 03:08:25,925 | INFO     | . stage-out = 5 s
[2026-03-15 23:08:59] 2026-03-16 03:08:25,925 | INFO     | . log creation = 0 s
[2026-03-15 23:08:59] 2026-03-16 03:08:25,926 | INFO     | ..............................
[2026-03-15 23:08:59] 2026-03-16 03:08:26,048 | INFO     | 
[2026-03-15 23:08:59] 2026-03-16 03:08:26,048 | INFO     | job summary report
[2026-03-15 23:08:59] 2026-03-16 03:08:26,048 | INFO     | --------------------------------------------------
[2026-03-15 23:08:59] 2026-03-16 03:08:26,048 | INFO     | PanDA job id: 7047738854
[2026-03-15 23:08:59] 2026-03-16 03:08:26,048 | INFO     | task id: 48998032
[2026-03-15 23:08:59] 2026-03-16 03:08:26,048 | INFO     | errors: (none)
[2026-03-15 23:08:59] 2026-03-16 03:08:26,048 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-15 23:08:59] 2026-03-16 03:08:26,048 | INFO     | pilot state: finished 
[2026-03-15 23:08:59] 2026-03-16 03:08:26,049 | INFO     | transexitcode: 0
[2026-03-15 23:08:59] 2026-03-16 03:08:26,049 | INFO     | exeerrorcode: 0
[2026-03-15 23:08:59] 2026-03-16 03:08:26,049 | INFO     | exeerrordiag: 
[2026-03-15 23:08:59] 2026-03-16 03:08:26,049 | INFO     | exitcode: 0
[2026-03-15 23:08:59] 2026-03-16 03:08:26,049 | INFO     | exitmsg: OK
[2026-03-15 23:08:59] 2026-03-16 03:08:26,049 | INFO     | cpuconsumptiontime: 123568 s
[2026-03-15 23:08:59] 2026-03-16 03:08:26,049 | INFO     | nevents: 400
[2026-03-15 23:08:59] 2026-03-16 03:08:26,049 | INFO     | neventsw: 0
[2026-03-15 23:08:59] 2026-03-16 03:08:26,049 | INFO     | pid: 34984
[2026-03-15 23:08:59] 2026-03-16 03:08:26,049 | INFO     | pgrp: 34984
[2026-03-15 23:08:59] 2026-03-16 03:08:26,049 | INFO     | corecount: 8
[2026-03-15 23:08:59] 2026-03-16 03:08:26,049 | INFO     | event service: False
[2026-03-15 23:08:59] 2026-03-16 03:08:26,050 | INFO     | sizes: {0: 2279856, 1: 2280260, 11: 2280260, 16420: 2311733, 16421: 2311732, 16426: 2320786, 16429: 2320970, 16430: 2321164}
[2026-03-15 23:08:59] 2026-03-16 03:08:26,050 | INFO     | --------------------------------------------------
[2026-03-15 23:08:59] 2026-03-16 03:08:26,050 | INFO     | 
[2026-03-15 23:08:59] 2026-03-16 03:08:26,050 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2026-03-15 23:08:59] 2026-03-16 03:08:26,067 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-15 23:08:59] 2026-03-16 03:08:26,067 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-15 23:08:59] 2026-03-16 03:08:26,067 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-15 23:08:59] 2026-03-16 03:08:26,068 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-15 23:08:59] 2026-03-16 03:08:26,068 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-15 23:08:59] 2026-03-16 03:08:26,068 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-15 23:08:59] 2026-03-16 03:08:26,068 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-15 23:08:59] 2026-03-16 03:08:26,068 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-15 23:08:59] 2026-03-16 03:08:26,068 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-15 23:08:59] 2026-03-16 03:08:26,069 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-15 23:08:59] 2026-03-16 03:08:26,069 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-15 23:08:59] 2026-03-16 03:08:26,069 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-15 23:08:59] 2026-03-16 03:08:26,069 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-15 23:08:59] 2026-03-16 03:08:26,069 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-15 23:08:59] 2026-03-16 03:08:26,069 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-15 23:08:59] 2026-03-16 03:08:26,070 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-15 23:08:59] 2026-03-16 03:08:26,070 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-15 23:08:59] 2026-03-16 03:08:26,070 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-15 23:08:59] 2026-03-16 03:08:26,070 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-15 23:08:59] 2026-03-16 03:08:26,070 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-15 23:08:59] 2026-03-16 03:08:26,070 | INFO     | job 7047738854 has completed (purged errors)
[2026-03-15 23:08:59] 2026-03-16 03:08:26,071 | INFO     | overall cleanup function is called
[2026-03-15 23:08:59] 2026-03-16 03:08:26,342 | INFO     | PID=30546 has CPU usage=10.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-15 23:08:59] 2026-03-16 03:08:26,342 | INFO     | .. there are 4 such processes running
[2026-03-15 23:08:59] 2026-03-16 03:08:27,079 | INFO     | --- collectZombieJob: --- 10, [34984]
[2026-03-15 23:08:59] 2026-03-16 03:08:27,079 | INFO     | zombie collector waiting for pid 34984
[2026-03-15 23:08:59] 2026-03-16 03:08:27,079 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-15 23:08:59] 2026-03-16 03:08:27,080 | INFO     | collected zombie processes
[2026-03-15 23:08:59] 2026-03-16 03:08:27,080 | INFO     | will attempt to kill all subprocesses of pid=34984
[2026-03-15 23:08:59] 2026-03-16 03:08:27,317 | INFO     | process IDs to be killed: [34984] (in reverse order)
[2026-03-15 23:08:59] 2026-03-16 03:08:27,386 | WARNING  | found no corresponding commands to process id(s)
[2026-03-15 23:08:59] 2026-03-16 03:08:27,387 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-15 23:08:59] 2026-03-16 03:08:27,391 | INFO     | did not find any defunct processes belonging to 34984
[2026-03-15 23:08:59] 2026-03-16 03:08:27,394 | INFO     | did not find any defunct processes belonging to 34984
[2026-03-15 23:08:59] 2026-03-16 03:08:27,394 | INFO     | ready for new job
[2026-03-15 23:08:59] 2026-03-16 03:08:27,395 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-15 23:08:59] 2026-03-16 03:08:27,396 | INFO     | **************************************
[2026-03-15 23:08:59] 2026-03-16 03:08:27,396 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-15 23:08:59] 2026-03-16 03:08:27,396 | INFO     | **************************************
[2026-03-15 23:08:59] 2026-03-16 03:08:27,397 | INFO     | 
[2026-03-15 23:08:59] 2026-03-16 03:08:27,398 | INFO     | architecture information:
[2026-03-15 23:08:59] 2026-03-16 03:08:27,398 | INFO     | executing command: cat /etc/os-release
[2026-03-15 23:08:59] 2026-03-16 03:08:27,408 | INFO     | cat /etc/os-release:
[2026-03-15 23:08:59] NAME="CentOS Linux"
[2026-03-15 23:08:59] VERSION="7 (Core)"
[2026-03-15 23:08:59] ID="centos"
[2026-03-15 23:08:59] ID_LIKE="rhel fedora"
[2026-03-15 23:08:59] VERSION_ID="7"
[2026-03-15 23:08:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-15 23:08:59] ANSI_COLOR="0;31"
[2026-03-15 23:08:59] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-15 23:08:59] HOME_URL="https://www.centos.org/"
[2026-03-15 23:08:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-15 23:08:59] 
[2026-03-15 23:08:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-15 23:08:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-15 23:08:59] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-15 23:08:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-15 23:08:59] 
[2026-03-15 23:08:59] 2026-03-16 03:08:27,408 | INFO     | **************************************
[2026-03-15 23:08:59] 2026-03-16 03:08:27,910 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2026-03-15 23:08:59] 2026-03-16 03:08:27,921 | INFO     | sufficient remaining disk space (102064193536 B)
[2026-03-15 23:08:59] 2026-03-16 03:08:27,922 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-15 23:08:59] 2026-03-16 03:08:27,922 | INFO     | current server update state: UPDATING_FINAL
[2026-03-15 23:08:59] 2026-03-16 03:08:27,923 | INFO     | update_server=False
[2026-03-15 23:08:59] 2026-03-16 03:08:27,923 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-15 23:08:59] 2026-03-16 03:08:27,923 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-15 23:08:59] 2026-03-16 03:08:27,924 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-15 23:08:59] 2026-03-16 03:08:28,477 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-15 23:08:59] 2026-03-16 03:08:28,477 | INFO     | aborting loop
[2026-03-15 23:08:59] 2026-03-16 03:08:28,659 | INFO     | all data control threads have been joined
[2026-03-15 23:08:59] 2026-03-16 03:08:28,928 | INFO     | [job] retrieve thread has finished
[2026-03-15 23:08:59] 2026-03-16 03:08:28,929 | INFO     | [job] queue monitor thread has finished
[2026-03-15 23:08:59] 2026-03-16 03:08:29,007 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-15 23:08:59] 2026-03-16 03:08:29,214 | INFO     | [job] validate thread has finished
[2026-03-15 23:08:59] 2026-03-16 03:08:29,215 | INFO     | [data] copytool_in thread has finished
[2026-03-15 23:08:59] 2026-03-16 03:08:29,272 | INFO     | [payload] validate_post thread has finished
[2026-03-15 23:08:59] 2026-03-16 03:08:29,273 | INFO     | [payload] validate_pre thread has finished
[2026-03-15 23:08:59] 2026-03-16 03:08:29,322 | INFO     | all job control threads have been joined
[2026-03-15 23:08:59] 2026-03-16 03:08:29,348 | INFO     | [payload] execute_payloads thread has finished
[2026-03-15 23:08:59] 2026-03-16 03:08:29,391 | INFO     | all payload control threads have been joined
[2026-03-15 23:08:59] 2026-03-16 03:08:29,482 | INFO     | [job] job monitor thread has finished
[2026-03-15 23:08:59] 2026-03-16 03:08:29,665 | INFO     | [data] control thread has finished
[2026-03-15 23:08:59] 2026-03-16 03:08:29,931 | INFO     | [data] copytool_out thread has finished
[2026-03-15 23:08:59] 2026-03-16 03:08:30,133 | INFO     | [payload] failed_post thread has finished
[2026-03-15 23:08:59] 2026-03-16 03:08:30,328 | INFO     | [job] control thread has finished
[2026-03-15 23:08:59] 2026-03-16 03:08:30,366 | INFO     | [job] create_data_payload thread has finished
[2026-03-15 23:08:59] 2026-03-16 03:08:30,398 | INFO     | [payload] control thread has finished
[2026-03-15 23:08:59] 2026-03-16 03:08:30,856 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-15 23:08:59] 2026-03-16 03:08:34,865 | INFO     | [data] queue_monitor thread has finished
[2026-03-15 23:08:59] 2026-03-16 03:08:52,156 | INFO     | [monitor] cgroup control has ended
[2026-03-15 23:08:59] 2026-03-16 03:08:53,162 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139872091936576)>', '<ExcThread(monitor, started 139871364568832)>']
[2026-03-15 23:08:59] 2026-03-16 03:08:58,174 | INFO     | all workflow threads have been joined
[2026-03-15 23:08:59] 2026-03-16 03:08:58,174 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-15 23:08:59] 2026-03-16 03:08:58,175 | INFO     | traces error code: 0
[2026-03-15 23:08:59] 2026-03-16 03:08:58,175 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-15 23:08:59] 2026-03-16 03:08:58,669 | INFO     | PID=30546 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-15 23:08:59] 2026-03-16 03:08:58,670 | INFO     | .. there are 4 such processes running
[2026-03-15 23:08:59] 2026-03-16 03:08:58,670 | INFO     | found 0 job(s) in 20 queues
[2026-03-15 23:08:59] 2026-03-16 03:08:58,671 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-15 23:08:59] 2026-03-16 03:08:58,671 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-15 23:08:59] 2026-03-16 03:08:58,671 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-15 23:08:59] 2026-03-16 03:08:58,671 | INFO     | [monitor] control thread has ended
[2026-03-15 23:08:59] 2026-03-16 03:08:58,785 [wrapper] ==== pilot stdout END ====
[2026-03-15 23:08:59] 2026-03-16 03:08:58,787 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-15 23:08:59] 2026-03-16 03:08:58,789 [wrapper] pilotpid: 30546
[2026-03-15 23:08:59] 2026-03-16 03:08:58,791 [wrapper] Pilot exit status: 0
[2026-03-15 23:08:59] 2026-03-16 03:08:58,800 [wrapper] pandaids: 7047738854
[2026-03-15 23:08:59] 2026-03-16 03:08:58,833 [wrapper] cleanup supervisor_pilot 17146 30547
[2026-03-15 23:08:59] 2026-03-16 03:08:58,835 [wrapper] Test setup, not cleaning
[2026-03-15 23:08:59] 2026-03-16 03:08:58,837 [wrapper] apfmon messages muted
[2026-03-15 23:08:59] 2026-03-16 03:08:58,840 [wrapper] ==== wrapper stdout END ====
[2026-03-15 23:08:59] 2026-03-16 03:08:58,842 [wrapper] ==== wrapper stderr END ====
[2026-03-15 23:08:59]  *** Error codes and diagnostics ***
[2026-03-15 23:08:59]     "exeErrorCode": 0,
[2026-03-15 23:08:59]     "exeErrorDiag": "",
[2026-03-15 23:08:59]     "pilotErrorCode": 0,
[2026-03-15 23:08:59]     "pilotErrorDiag": "",
[2026-03-15 23:08:59]  *** Listing of results directory ***
[2026-03-15 23:08:59] total 643632
[2026-03-15 23:08:59] -rw-r--r-- 1 boincer umatlas    584627 Mar  9 16:32 pilot3.tar.gz
[2026-03-15 23:08:59] -rwx------ 1 boincer umatlas     36322 Mar  9 16:43 runpilot2-wrapper.sh
[2026-03-15 23:08:59] -rw-r--r-- 1 boincer umatlas      5111 Mar  9 16:44 queuedata.json
[2026-03-15 23:08:59] -rw-r--r-- 1 boincer umatlas       100 Mar 15 18:34 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-15 23:08:59] -rwxr-xr-x 1 boincer umatlas      7986 Mar 15 18:34 run_atlas
[2026-03-15 23:08:59] -rw-r--r-- 1 boincer umatlas       105 Mar 15 18:34 job.xml
[2026-03-15 23:08:59] -rw-r--r-- 2 boincer umatlas 358694854 Mar 15 18:34 EVNT.48998030._000062.pool.root.1
[2026-03-15 23:08:59] -rw-r--r-- 2 boincer umatlas     15845 Mar 15 18:34 start_atlas.sh
[2026-03-15 23:08:59] drwxrwx--x 2 boincer umatlas      4096 Mar 15 18:34 shared
[2026-03-15 23:08:59] -rw-r--r-- 2 boincer umatlas    597948 Mar 15 18:34 input.tar.gz
[2026-03-15 23:08:59] -rw-r--r-- 1 boincer umatlas         0 Mar 15 18:34 boinc_lockfile
[2026-03-15 23:08:59] -rw-r--r-- 1 boincer umatlas      2560 Mar 15 18:34 pandaJob.out
[2026-03-15 23:08:59] -rw------- 1 boincer umatlas        57 Mar 15 18:34 setup.sh.local
[2026-03-15 23:08:59] -rw------- 1 boincer umatlas   1006471 Mar 15 18:34 agis_schedconf.cvmfs.json
[2026-03-15 23:08:59] -rw------- 1 boincer umatlas       438 Mar 15 18:34 workernode_map.json
[2026-03-15 23:08:59] drwx------ 5 boincer umatlas      4096 Mar 15 18:34 pilot3
[2026-03-15 23:08:59] -rw-r--r-- 1 boincer umatlas      6038 Mar 15 23:04 init_data.xml
[2026-03-15 23:08:59] -rw------- 1 boincer umatlas 290880435 Mar 15 23:07 HITS.48998032._001552.pool.root.1
[2026-03-15 23:08:59] -rw-r--r-- 1 boincer umatlas       532 Mar 15 23:07 boinc_task_state.xml
[2026-03-15 23:08:59] -rw------- 1 boincer umatlas      1045 Mar 15 23:08 memory_monitor_summary.json
[2026-03-15 23:08:59] -rw------- 1 boincer umatlas   1511579 Mar 15 23:08 agis_ddmendpoints.agis.ALL.json
[2026-03-15 23:08:59] -rw------- 1 boincer umatlas    509703 Mar 15 23:08 log.48998032._001552.job.log.tgz.1
[2026-03-15 23:08:59] -rw------- 1 boincer umatlas      6396 Mar 15 23:08 heartbeat.json
[2026-03-15 23:08:59] -rw-r--r-- 1 boincer umatlas      8192 Mar 15 23:08 boinc_mmap_file
[2026-03-15 23:08:59] -rw-r--r-- 1 boincer umatlas        29 Mar 15 23:08 wrapper_checkpoint.txt
[2026-03-15 23:08:59] -rw------- 1 boincer umatlas        95 Mar 15 23:08 pilot_heartbeat.json
[2026-03-15 23:08:59] -rw------- 1 boincer umatlas       820 Mar 15 23:08 pilotlog.txt
[2026-03-15 23:08:59] -rw------- 1 boincer umatlas   2273670 Mar 15 23:08 log.48998032._001552.job.log.1
[2026-03-15 23:08:59] -rw------- 1 boincer umatlas       357 Mar 15 23:08 output.list
[2026-03-15 23:08:59] -rw-r--r-- 1 boincer umatlas       620 Mar 15 23:08 runtime_log
[2026-03-15 23:08:59] -rw------- 1 boincer umatlas   2805760 Mar 15 23:08 result.tar.gz
[2026-03-15 23:08:59] -rw-r--r-- 1 boincer umatlas      9332 Mar 15 23:08 runtime_log.err
[2026-03-15 23:08:59] -rw------- 1 boincer umatlas       661 Mar 15 23:08 gzPODmEdwJ9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDm6kdLDmk4v1xm.diag
[2026-03-15 23:08:59] -rw-r--r-- 1 boincer umatlas     21344 Mar 15 23:08 stderr.txt
[2026-03-15 23:08:59] HITS file was successfully produced:
[2026-03-15 23:08:59] -rw------- 1 boincer umatlas 290880435 Mar 15 23:07 shared/HITS.pool.root.1
[2026-03-15 23:08:59]  *** Contents of shared directory: ***
[2026-03-15 23:08:59] total 637696
[2026-03-15 23:08:59] -rw-r--r-- 2 boincer umatlas 358694854 Mar 15 18:34 ATLAS.root_0
[2026-03-15 23:08:59] -rw-r--r-- 2 boincer umatlas     15845 Mar 15 18:34 start_atlas.sh
[2026-03-15 23:08:59] -rw-r--r-- 2 boincer umatlas    597948 Mar 15 18:34 input.tar.gz
[2026-03-15 23:08:59] -rw------- 1 boincer umatlas 290880435 Mar 15 23:07 HITS.pool.root.1
[2026-03-15 23:08:59] -rw------- 1 boincer umatlas   2805760 Mar 15 23:08 result.tar.gz
23:09:00 (26784): run_atlas exited; CPU time 124021.858305
23:09:00 (26784): called boinc_finish(0)

</stderr_txt>
]]>

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