Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
08:33:54 (22037): wrapper (7.7.26015): starting
08:33:54 (22037): wrapper: running run_atlas (--nthreads 8)
[2026-03-16 08:33:54] Arguments: --nthreads 8
[2026-03-16 08:33:54] Threads: 8
[2026-03-16 08:33:54] Checking for CVMFS
[2026-03-16 08:33:55] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-16 08:33:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-16 08:33:57] Running cvmfs_config stat atlas.cern.ch
[2026-03-16 08:33:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-16 08:33:58] 2.11.2.0 14084 130160 138264 157345 2 53 21978750 25165825 4726 130560 159 41047393 99.791 31279767 1069 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-03-16 08:33:58] CVMFS is ok
[2026-03-16 08:33:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-16 08:33:58] Checking for apptainer binary...
[2026-03-16 08:33:58] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-16 08:33:58] Running /usr/bin/apptainer --version
[2026-03-16 08:33:58] apptainer version 1.3.2-1.el7
[2026-03-16 08:33:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-16 08:34:25] cg-vwn482.simple-grid.lan
[2026-03-16 08:34:25] apptainer works
[2026-03-16 08:34:25] Set ATHENA_PROC_NUMBER=8
[2026-03-16 08:34:25] Set ATHENA_CORE_NUMBER=8
[2026-03-16 08:34:25] Starting ATLAS job with PandaID=7056217343
[2026-03-16 08:34:25] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-16 13:06:03]  *** The last 200 lines of the pilot log: ***
[2026-03-16 13:06:03] 2026-03-16 12:05:06,909 | INFO     | extracted standard info from prmon json
[2026-03-16 13:06:03] 2026-03-16 12:05:06,909 | INFO     | extracted standard memory fields from prmon json
[2026-03-16 13:06:03] 2026-03-16 12:05:06,909 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-16 13:06:03] 2026-03-16 12:05:06,909 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-16 13:06:03] 2026-03-16 12:05:06,909 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-16 13:06:03] 2026-03-16 12:05:06,914 | INFO     | fitting pss+swap vs Time
[2026-03-16 13:06:03] 2026-03-16 12:05:06,914 | INFO     | sum of square deviations: 5325139844.5
[2026-03-16 13:06:03] 2026-03-16 12:05:06,921 | INFO     | sum of deviations: 81761400995.99997
[2026-03-16 13:06:03] 2026-03-16 12:05:06,921 | INFO     | mean x: 1773654847.5
[2026-03-16 13:06:03] 2026-03-16 12:05:06,921 | INFO     | mean y: 2442954.2170542637
[2026-03-16 13:06:03] 2026-03-16 12:05:06,921 | INFO     | intersect: -27229988390.233936
[2026-03-16 13:06:03] 2026-03-16 12:05:06,922 | INFO     | chi2: 6.256713307271489
[2026-03-16 13:06:03] 2026-03-16 12:05:06,922 | INFO     | sum of square deviations: 5021496942.0
[2026-03-16 13:06:03] 2026-03-16 12:05:06,924 | INFO     | sum of deviations: 96837542883.0
[2026-03-16 13:06:03] 2026-03-16 12:05:06,925 | INFO     | mean x: 1773654695.0
[2026-03-16 13:06:03] 2026-03-16 12:05:06,925 | INFO     | mean y: 2450391.9446640317
[2026-03-16 13:06:03] 2026-03-16 12:05:06,925 | INFO     | intersect: -34201764918.856335
[2026-03-16 13:06:03] 2026-03-16 12:05:06,925 | INFO     | chi2: 5.536272100711897
[2026-03-16 13:06:03] 2026-03-16 12:05:06,925 | INFO     | current chi2=5.536272100711897 (change=11.514691039499962 %)
[2026-03-16 13:06:03] 2026-03-16 12:05:06,925 | INFO     | right removable region: 252
[2026-03-16 13:06:03] 2026-03-16 12:05:06,926 | INFO     | sum of square deviations: 5021496942.0
[2026-03-16 13:06:03] 2026-03-16 12:05:06,928 | INFO     | sum of deviations: -4398954000.0
[2026-03-16 13:06:03] 2026-03-16 12:05:06,928 | INFO     | mean x: 1773655000.0
[2026-03-16 13:06:03] 2026-03-16 12:05:06,928 | INFO     | mean y: 2486188.2885375493
[2026-03-16 13:06:03] 2026-03-16 12:05:06,929 | INFO     | intersect: 1556251299.9650707
[2026-03-16 13:06:03] 2026-03-16 12:05:06,929 | INFO     | chi2: 1.8518236551797114
[2026-03-16 13:06:03] 2026-03-16 12:05:06,929 | INFO     | current chi2=1.8518236551797114 (change=70.40261293373405 %)
[2026-03-16 13:06:03] 2026-03-16 12:05:06,929 | INFO     | sum of square deviations: 4729621702.0
[2026-03-16 13:06:03] 2026-03-16 12:05:06,940 | INFO     | sum of deviations: -37133604942.0
[2026-03-16 13:06:03] 2026-03-16 12:05:06,949 | INFO     | mean x: 1773655152.5
[2026-03-16 13:06:03] 2026-03-16 12:05:06,949 | INFO     | mean y: 2503161.3225806453
[2026-03-16 13:06:03] 2026-03-16 12:05:06,949 | INFO     | intersect: 13927974136.818745
[2026-03-16 13:06:03] 2026-03-16 12:05:06,950 | INFO     | chi2: 0.9282125854224467
[2026-03-16 13:06:03] 2026-03-16 12:05:06,950 | INFO     | current chi2=0.9282125854224467 (change=49.87575718529377 %)
[2026-03-16 13:06:03] 2026-03-16 12:05:06,950 | INFO     | sum of square deviations: 4449281562.0
[2026-03-16 13:06:03] 2026-03-16 12:05:06,952 | INFO     | sum of deviations: -31995731590.0
[2026-03-16 13:06:03] 2026-03-16 12:05:06,953 | INFO     | mean x: 1773655305.0
[2026-03-16 13:06:03] 2026-03-16 12:05:06,953 | INFO     | mean y: 2500345.9835390947
[2026-03-16 13:06:03] 2026-03-16 12:05:06,953 | INFO     | intersect: 12757233504.846634
[2026-03-16 13:06:03] 2026-03-16 12:05:06,953 | INFO     | chi2: 0.9117729901957683
[2026-03-16 13:06:03] 2026-03-16 12:05:06,953 | INFO     | current chi2=0.9117729901957683 (change=1.7711023837493443 %)
[2026-03-16 13:06:03] 2026-03-16 12:05:06,954 | INFO     | left removable region: 30
[2026-03-16 13:06:03] 2026-03-16 12:05:06,954 | INFO     | sum of square deviations: 3392567795.5
[2026-03-16 13:06:03] 2026-03-16 12:05:06,956 | INFO     | sum of deviations: 8147556957.500001
[2026-03-16 13:06:03] 2026-03-16 12:05:06,956 | INFO     | mean x: 1773655579.5
[2026-03-16 13:06:03] 2026-03-16 12:05:06,956 | INFO     | mean y: 2494715.9414414414
[2026-03-16 13:06:03] 2026-03-16 12:05:06,956 | INFO     | intersect: -4257098821.4764676
[2026-03-16 13:06:03] 2026-03-16 12:05:06,956 | INFO     | chi2: 0.0004778635526068208
[2026-03-16 13:06:03] 2026-03-16 12:05:06,956 | INFO     | current memory leak: 2.40 B/s (using 222 data points, chi2=0.00)
[2026-03-16 13:06:03] 2026-03-16 12:05:06,957 | INFO     | could have reported an average CPU frequency of 2249 MHz (12 samples)
[2026-03-16 13:06:03] 2026-03-16 12:05:06,957 | INFO     | ..............................
[2026-03-16 13:06:03] 2026-03-16 12:05:06,957 | INFO     | . Timing measurements:
[2026-03-16 13:06:03] 2026-03-16 12:05:06,957 | INFO     | . get job = 0 s
[2026-03-16 13:06:03] 2026-03-16 12:05:06,957 | INFO     | . initial setup = 105 s
[2026-03-16 13:06:03] 2026-03-16 12:05:06,957 | INFO     | . payload setup = 128 s
[2026-03-16 13:06:03] 2026-03-16 12:05:06,957 | INFO     | . stage-in = 0 s
[2026-03-16 13:06:03] 2026-03-16 12:05:06,958 | INFO     | . payload execution = 15798 s
[2026-03-16 13:06:03] 2026-03-16 12:05:06,958 | INFO     | . stage-out = 3 s
[2026-03-16 13:06:03] 2026-03-16 12:05:06,958 | INFO     | . log creation = 1 s
[2026-03-16 13:06:03] 2026-03-16 12:05:06,958 | INFO     | ..............................
[2026-03-16 13:06:03] 2026-03-16 12:05:07,265 | INFO     | time since job start (15940s) is within the limit (345600.0s)
[2026-03-16 13:06:03] 2026-03-16 12:05:07,308 | INFO     | 
[2026-03-16 13:06:03] 2026-03-16 12:05:07,308 | INFO     | job summary report
[2026-03-16 13:06:03] 2026-03-16 12:05:07,308 | INFO     | --------------------------------------------------
[2026-03-16 13:06:03] 2026-03-16 12:05:07,308 | INFO     | PanDA job id: 7056217343
[2026-03-16 13:06:03] 2026-03-16 12:05:07,308 | INFO     | task id: 48967085
[2026-03-16 13:06:03] 2026-03-16 12:05:07,308 | INFO     | errors: (none)
[2026-03-16 13:06:03] 2026-03-16 12:05:07,309 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-16 13:06:03] 2026-03-16 12:05:07,309 | INFO     | pilot state: finished 
[2026-03-16 13:06:03] 2026-03-16 12:05:07,309 | INFO     | transexitcode: 0
[2026-03-16 13:06:03] 2026-03-16 12:05:07,309 | INFO     | exeerrorcode: 0
[2026-03-16 13:06:03] 2026-03-16 12:05:07,309 | INFO     | exeerrordiag: 
[2026-03-16 13:06:03] 2026-03-16 12:05:07,309 | INFO     | exitcode: 0
[2026-03-16 13:06:03] 2026-03-16 12:05:07,309 | INFO     | exitmsg: OK
[2026-03-16 13:06:03] 2026-03-16 12:05:07,309 | INFO     | cpuconsumptiontime: 61484 s
[2026-03-16 13:06:03] 2026-03-16 12:05:07,309 | INFO     | nevents: 400
[2026-03-16 13:06:03] 2026-03-16 12:05:07,309 | INFO     | neventsw: 0
[2026-03-16 13:06:03] 2026-03-16 12:05:07,309 | INFO     | pid: 30609
[2026-03-16 13:06:03] 2026-03-16 12:05:07,310 | INFO     | pgrp: 30609
[2026-03-16 13:06:03] 2026-03-16 12:05:07,310 | INFO     | corecount: 8
[2026-03-16 13:06:03] 2026-03-16 12:05:07,310 | INFO     | event service: False
[2026-03-16 13:06:03] 2026-03-16 12:05:07,310 | INFO     | sizes: {0: 2279811, 1: 2280272, 15931: 2311505, 15935: 2320531, 15938: 2320781}
[2026-03-16 13:06:03] 2026-03-16 12:05:07,310 | INFO     | --------------------------------------------------
[2026-03-16 13:06:03] 2026-03-16 12:05:07,310 | INFO     | 
[2026-03-16 13:06:03] 2026-03-16 12:05:07,310 | INFO     | executing command: ls -lF /var/lib/boinc/slots/1
[2026-03-16 13:06:03] 2026-03-16 12:05:07,923 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-16 13:06:03] 2026-03-16 12:05:07,924 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-16 13:06:03] 2026-03-16 12:05:07,924 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-16 13:06:03] 2026-03-16 12:05:07,924 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-16 13:06:03] 2026-03-16 12:05:07,924 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-16 13:06:03] 2026-03-16 12:05:07,924 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-16 13:06:03] 2026-03-16 12:05:07,924 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-16 13:06:03] 2026-03-16 12:05:07,924 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-16 13:06:03] 2026-03-16 12:05:07,924 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-16 13:06:03] 2026-03-16 12:05:07,924 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-16 13:06:03] 2026-03-16 12:05:07,925 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-16 13:06:03] 2026-03-16 12:05:07,925 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-16 13:06:03] 2026-03-16 12:05:07,925 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-16 13:06:03] 2026-03-16 12:05:07,925 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-16 13:06:03] 2026-03-16 12:05:07,925 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-16 13:06:03] 2026-03-16 12:05:07,925 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-16 13:06:03] 2026-03-16 12:05:07,925 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-16 13:06:03] 2026-03-16 12:05:07,925 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-16 13:06:03] 2026-03-16 12:05:07,925 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-16 13:06:03] 2026-03-16 12:05:07,926 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-16 13:06:03] 2026-03-16 12:05:07,926 | INFO     | job 7056217343 has completed (purged errors)
[2026-03-16 13:06:03] 2026-03-16 12:05:07,926 | INFO     | overall cleanup function is called
[2026-03-16 13:06:03] 2026-03-16 12:05:08,936 | INFO     | --- collectZombieJob: --- 10, [30609]
[2026-03-16 13:06:03] 2026-03-16 12:05:08,936 | INFO     | zombie collector waiting for pid 30609
[2026-03-16 13:06:03] 2026-03-16 12:05:08,936 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-16 13:06:03] 2026-03-16 12:05:08,936 | INFO     | collected zombie processes
[2026-03-16 13:06:03] 2026-03-16 12:05:08,936 | INFO     | will attempt to kill all subprocesses of pid=30609
[2026-03-16 13:06:03] 2026-03-16 12:05:09,075 | INFO     | process IDs to be killed: [30609] (in reverse order)
[2026-03-16 13:06:03] 2026-03-16 12:05:09,936 | WARNING  | found no corresponding commands to process id(s)
[2026-03-16 13:06:03] 2026-03-16 12:05:09,937 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-16 13:06:03] 2026-03-16 12:05:09,940 | INFO     | did not find any defunct processes belonging to 30609
[2026-03-16 13:06:03] 2026-03-16 12:05:09,942 | INFO     | did not find any defunct processes belonging to 30609
[2026-03-16 13:06:03] 2026-03-16 12:05:09,943 | INFO     | ready for new job
[2026-03-16 13:06:03] 2026-03-16 12:05:09,943 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-16 13:06:03] 2026-03-16 12:05:09,945 | INFO     | **************************************
[2026-03-16 13:06:03] 2026-03-16 12:05:09,945 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-16 13:06:03] 2026-03-16 12:05:09,945 | INFO     | **************************************
[2026-03-16 13:06:03] 2026-03-16 12:05:09,945 | INFO     | 
[2026-03-16 13:06:03] 2026-03-16 12:05:09,946 | INFO     | pilot is running in a VM
[2026-03-16 13:06:03] 2026-03-16 12:05:09,946 | INFO     | architecture information:
[2026-03-16 13:06:03] 2026-03-16 12:05:09,955 | INFO     | executing command: cat /etc/os-release
[2026-03-16 13:06:03] 2026-03-16 12:05:10,196 | INFO     | cat /etc/os-release:
[2026-03-16 13:06:03] NAME="CentOS Linux"
[2026-03-16 13:06:03] VERSION="7 (Core)"
[2026-03-16 13:06:03] ID="centos"
[2026-03-16 13:06:03] ID_LIKE="rhel fedora"
[2026-03-16 13:06:03] VERSION_ID="7"
[2026-03-16 13:06:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-16 13:06:03] ANSI_COLOR="0;31"
[2026-03-16 13:06:03] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-16 13:06:03] HOME_URL="https://www.centos.org/"
[2026-03-16 13:06:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-16 13:06:03] 
[2026-03-16 13:06:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-16 13:06:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-16 13:06:03] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-16 13:06:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-16 13:06:03] 
[2026-03-16 13:06:03] 2026-03-16 12:05:10,196 | INFO     | **************************************
[2026-03-16 13:06:03] 2026-03-16 12:05:10,699 | INFO     | executing command: df -mP /var/lib/boinc/slots/1
[2026-03-16 13:06:03] 2026-03-16 12:05:10,933 | INFO     | sufficient remaining disk space (496645439488 B)
[2026-03-16 13:06:03] 2026-03-16 12:05:10,934 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-16 13:06:03] 2026-03-16 12:05:10,934 | INFO     | current server update state: UPDATING_FINAL
[2026-03-16 13:06:03] 2026-03-16 12:05:10,934 | INFO     | update_server=False
[2026-03-16 13:06:03] 2026-03-16 12:05:10,934 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-16 13:06:03] 2026-03-16 12:05:10,955 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-16 13:06:03] 2026-03-16 12:05:10,955 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-16 13:06:03] 2026-03-16 12:05:10,955 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-16 13:06:03] 2026-03-16 12:05:10,955 | INFO     | will abort loop
[2026-03-16 13:06:03] 2026-03-16 12:05:11,013 | INFO     | all payload control threads have been joined
[2026-03-16 13:06:03] 2026-03-16 12:05:11,228 | INFO     | all data control threads have been joined
[2026-03-16 13:06:03] 2026-03-16 12:05:11,940 | INFO     | [job] retrieve thread has finished
[2026-03-16 13:06:03] 2026-03-16 12:05:11,949 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-16 13:06:03] 2026-03-16 12:05:11,960 | INFO     | [job] validate thread has finished
[2026-03-16 13:06:03] 2026-03-16 12:05:11,961 | INFO     | [job] job monitor thread has finished
[2026-03-16 13:06:03] 2026-03-16 12:05:12,019 | INFO     | [payload] control thread has finished
[2026-03-16 13:06:03] 2026-03-16 12:05:12,136 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-16 13:06:03] 2026-03-16 12:05:12,161 | INFO     | [payload] failed_post thread has finished
[2026-03-16 13:06:03] 2026-03-16 12:05:12,181 | INFO     | all job control threads have been joined
[2026-03-16 13:06:03] 2026-03-16 12:05:12,234 | INFO     | [data] control thread has finished
[2026-03-16 13:06:03] 2026-03-16 12:05:12,594 | INFO     | [job] create_data_payload thread has finished
[2026-03-16 13:06:03] 2026-03-16 12:05:12,912 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-16 13:06:03] 2026-03-16 12:05:12,918 | INFO     | [payload] validate_post thread has finished
[2026-03-16 13:06:03] 2026-03-16 12:05:12,924 | INFO     | [payload] validate_pre thread has finished
[2026-03-16 13:06:03] 2026-03-16 12:05:12,991 | INFO     | [data] copytool_in thread has finished
[2026-03-16 13:06:03] 2026-03-16 12:05:13,142 | INFO     | [job] queue monitor thread has finished
[2026-03-16 13:06:03] 2026-03-16 12:05:13,186 | INFO     | [job] control thread has finished
[2026-03-16 13:06:03] 2026-03-16 12:05:13,437 | INFO     | [payload] execute_payloads thread has finished
[2026-03-16 13:06:03] 2026-03-16 12:05:13,956 | INFO     | [data] copytool_out thread has finished
[2026-03-16 13:06:03] 2026-03-16 12:05:16,921 | INFO     | [data] queue_monitor thread has finished
[2026-03-16 13:06:03] 2026-03-16 12:05:21,552 | INFO     | job.realtimelogging is not enabled
[2026-03-16 13:06:03] 2026-03-16 12:05:22,558 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-16 13:06:03] 2026-03-16 12:05:40,444 | INFO     | PID=26118 has CPU usage=4.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-16 13:06:03] 2026-03-16 12:05:40,445 | INFO     | .. there are 9 such processes running
[2026-03-16 13:06:03] 2026-03-16 12:05:40,445 | INFO     | found 0 job(s) in 20 queues
[2026-03-16 13:06:03] 2026-03-16 12:05:40,446 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-16 13:06:03] 2026-03-16 12:05:40,446 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-16 13:06:03] 2026-03-16 12:05:54,865 | INFO     | [monitor] cgroup control has ended
[2026-03-16 13:06:03] 2026-03-16 12:05:55,513 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140463699355456)>', '<ExcThread(monitor, started 140463247963904)>']
[2026-03-16 13:06:03] 2026-03-16 12:05:55,535 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-16 13:06:03] 2026-03-16 12:05:55,535 | INFO     | [monitor] control thread has ended
[2026-03-16 13:06:03] 2026-03-16 12:06:00,539 | INFO     | all workflow threads have been joined
[2026-03-16 13:06:03] 2026-03-16 12:06:00,539 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-16 13:06:03] 2026-03-16 12:06:00,539 | INFO     | traces error code: 0
[2026-03-16 13:06:03] 2026-03-16 12:06:00,540 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-16 13:06:03] 2026-03-16 12:06:00,889 [wrapper] ==== pilot stdout END ====
[2026-03-16 13:06:03] 2026-03-16 12:06:00,994 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-16 13:06:03] 2026-03-16 12:06:01,078 [wrapper] pilotpid: 26118
[2026-03-16 13:06:03] 2026-03-16 12:06:01,158 [wrapper] Pilot exit status: 0
[2026-03-16 13:06:03] 2026-03-16 12:06:01,459 [wrapper] pandaids: 7056217343
[2026-03-16 13:06:03] 2026-03-16 12:06:02,258 [wrapper] cleanup supervisor_pilot  6434 26119
[2026-03-16 13:06:03] 2026-03-16 12:06:02,332 [wrapper] Test setup, not cleaning
[2026-03-16 13:06:03] 2026-03-16 12:06:02,399 [wrapper] apfmon messages muted
[2026-03-16 13:06:03] 2026-03-16 12:06:02,445 [wrapper] ==== wrapper stdout END ====
[2026-03-16 13:06:03] 2026-03-16 12:06:02,522 [wrapper] ==== wrapper stderr END ====
[2026-03-16 13:06:03]  *** Error codes and diagnostics ***
[2026-03-16 13:06:03]     "exeErrorCode": 0,
[2026-03-16 13:06:03]     "exeErrorDiag": "",
[2026-03-16 13:06:03]     "pilotErrorCode": 0,
[2026-03-16 13:06:03]     "pilotErrorDiag": "",
[2026-03-16 13:06:03]  *** Listing of results directory ***
[2026-03-16 13:06:03] total 416128
[2026-03-16 13:06:03] -rw-r--r--. 1 boinc boinc      5111 Mar 15 23:03 queuedata.json
[2026-03-16 13:06:03] -rw-r--r--. 1 boinc boinc    585013 Mar 15 23:03 pilot3.tar.gz
[2026-03-16 13:06:03] -rwx------. 1 boinc boinc     36322 Mar 15 23:03 runpilot2-wrapper.sh
[2026-03-16 13:06:03] -rw-r--r--. 1 boinc boinc       100 Mar 16 08:33 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-16 13:06:03] -rwxr-xr-x. 1 boinc boinc      7986 Mar 16 08:33 run_atlas
[2026-03-16 13:06:03] -rw-r--r--. 1 boinc boinc       105 Mar 16 08:33 job.xml
[2026-03-16 13:06:03] -rw-r--r--. 1 boinc boinc      6391 Mar 16 08:33 init_data.xml
[2026-03-16 13:06:03] -rw-r--r--. 2 boinc boinc 215881758 Mar 16 08:33 EVNT.48967083._000969.pool.root.1
[2026-03-16 13:06:03] -rw-r--r--. 2 boinc boinc     15845 Mar 16 08:33 start_atlas.sh
[2026-03-16 13:06:03] drwxrwx--x. 2 boinc boinc        68 Mar 16 08:33 shared
[2026-03-16 13:06:03] -rw-r--r--. 2 boinc boinc    597528 Mar 16 08:33 input.tar.gz
[2026-03-16 13:06:03] -rw-r--r--. 1 boinc boinc         0 Mar 16 08:33 boinc_lockfile
[2026-03-16 13:06:03] -rw-r--r--. 1 boinc boinc      2565 Mar 16 08:34 pandaJob.out
[2026-03-16 13:06:03] -rw-------. 1 boinc boinc       415 Mar 16 08:39 workernode_map.json
[2026-03-16 13:06:03] -rw-------. 1 boinc boinc   1006471 Mar 16 08:39 agis_schedconf.cvmfs.json
[2026-03-16 13:06:03] drwx------. 5 boinc boinc      4096 Mar 16 08:39 pilot3
[2026-03-16 13:06:03] -rw-------. 1 boinc boinc 200913917 Mar 16 13:03 HITS.48967085._024229.pool.root.1
[2026-03-16 13:06:03] -rw-r--r--. 1 boinc boinc       531 Mar 16 13:04 boinc_task_state.xml
[2026-03-16 13:06:03] -rw-------. 1 boinc boinc      1010 Mar 16 13:04 memory_monitor_summary.json
[2026-03-16 13:06:03] -rw-------. 1 boinc boinc   1511579 Mar 16 13:05 agis_ddmendpoints.agis.ALL.json
[2026-03-16 13:06:03] -rw-------. 1 boinc boinc    472951 Mar 16 13:05 log.48967085._024229.job.log.tgz.1
[2026-03-16 13:06:03] -rw-------. 1 boinc boinc      6317 Mar 16 13:05 heartbeat.json
[2026-03-16 13:06:03] -rw-r--r--. 1 boinc boinc      8192 Mar 16 13:05 boinc_mmap_file
[2026-03-16 13:06:03] -rw-r--r--. 1 boinc boinc        28 Mar 16 13:05 wrapper_checkpoint.txt
[2026-03-16 13:06:03] -rw-------. 1 boinc boinc        95 Mar 16 13:05 pilot_heartbeat.json
[2026-03-16 13:06:03] -rw-------. 1 boinc boinc      5138 Mar 16 13:06 pilotlog.txt
[2026-03-16 13:06:03] -rw-------. 1 boinc boinc   2223992 Mar 16 13:06 log.48967085._024229.job.log.1
[2026-03-16 13:06:03] -rw-------. 1 boinc boinc       357 Mar 16 13:06 output.list
[2026-03-16 13:06:03] -rw-r--r--. 1 boinc boinc       620 Mar 16 13:06 runtime_log
[2026-03-16 13:06:03] -rw-------. 1 boinc boinc   2713600 Mar 16 13:06 result.tar.gz
[2026-03-16 13:06:03] -rw-r--r--. 1 boinc boinc      8816 Mar 16 13:06 runtime_log.err
[2026-03-16 13:06:03] -rw-------. 1 boinc boinc       655 Mar 16 13:06 PJ4KDmSj8L9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmqavLDmCeR05n.diag
[2026-03-16 13:06:03] -rw-r--r--. 1 boinc boinc     20633 Mar 16 13:06 stderr.txt
[2026-03-16 13:06:03] HITS file was successfully produced:
[2026-03-16 13:06:03] -rw-------. 1 boinc boinc 200913917 Mar 16 13:03 shared/HITS.pool.root.1
[2026-03-16 13:06:03]  *** Contents of shared directory: ***
[2026-03-16 13:06:03] total 410284
[2026-03-16 13:06:03] -rw-r--r--. 2 boinc boinc 215881758 Mar 16 08:33 ATLAS.root_0
[2026-03-16 13:06:03] -rw-r--r--. 2 boinc boinc     15845 Mar 16 08:33 start_atlas.sh
[2026-03-16 13:06:03] -rw-r--r--. 2 boinc boinc    597528 Mar 16 08:33 input.tar.gz
[2026-03-16 13:06:03] -rw-------. 1 boinc boinc 200913917 Mar 16 13:03 HITS.pool.root.1
[2026-03-16 13:06:03] -rw-------. 1 boinc boinc   2713600 Mar 16 13:06 result.tar.gz
13:06:05 (22037): run_atlas exited; CPU time 61704.871156
13:06:05 (22037): called boinc_finish(0)

</stderr_txt>
]]>

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