Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:06:07 (4012): wrapper (7.7.26015): starting
23:06:07 (4012): wrapper: running run_atlas (--nthreads 8)
[2026-03-15 23:06:07] Arguments: --nthreads 8
[2026-03-15 23:06:07] Threads: 8
[2026-03-15 23:06:07] Checking for CVMFS
[2026-03-15 23:06:08] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-15 23:06:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-15 23:06:09] Running cvmfs_config stat atlas.cern.ch
[2026-03-15 23:06:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-15 23:06:11] 2.11.2.0 14084 129592 138324 157328 0 11 21758528 25165825 4717 130560 159 40921278 99.790 31194415 1067 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-03-15 23:06:11] CVMFS is ok
[2026-03-15 23:06:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-15 23:06:11] Checking for apptainer binary...
[2026-03-15 23:06:11] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-15 23:06:11] Running /usr/bin/apptainer --version
[2026-03-15 23:06:11] apptainer version 1.3.2-1.el7
[2026-03-15 23:06:11] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-15 23:06:24] cg-vwn482.simple-grid.lan
[2026-03-15 23:06:24] apptainer works
[2026-03-15 23:06:24] Set ATHENA_PROC_NUMBER=8
[2026-03-15 23:06:24] Set ATHENA_CORE_NUMBER=8
[2026-03-15 23:06:24] Starting ATLAS job with PandaID=7056217342
[2026-03-15 23:06:24] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-16 03:47:10]  *** The last 200 lines of the pilot log: ***
[2026-03-16 03:47:10] 2026-03-16 02:46:26,945 | INFO     | job 7056217342 has finished - writing final server update
[2026-03-16 03:47:10] 2026-03-16 02:46:26,946 | INFO     | total number of processed events: 400 (read)
[2026-03-16 03:47:10] 2026-03-16 02:46:26,948 | INFO     | using path: /var/lib/boinc/slots/1/PanDA_Pilot-7056217342/memory_monitor_summary.json (trf name=prmon)
[2026-03-16 03:47:10] 2026-03-16 02:46:26,948 | INFO     | extracted standard info from prmon json
[2026-03-16 03:47:10] 2026-03-16 02:46:26,948 | INFO     | extracted standard memory fields from prmon json
[2026-03-16 03:47:10] 2026-03-16 02:46:26,948 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-16 03:47:10] 2026-03-16 02:46:26,949 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-16 03:47:10] 2026-03-16 02:46:26,949 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-16 03:47:10] 2026-03-16 02:46:26,953 | INFO     | fitting pss+swap vs Time
[2026-03-16 03:47:10] 2026-03-16 02:46:26,954 | INFO     | sum of square deviations: 5836025702.5
[2026-03-16 03:47:10] 2026-03-16 02:46:26,956 | INFO     | sum of deviations: 68837815366.50002
[2026-03-16 03:47:10] 2026-03-16 02:46:26,956 | INFO     | mean x: 1773621038.5
[2026-03-16 03:47:10] 2026-03-16 02:46:26,956 | INFO     | mean y: 2459698.0639097746
[2026-03-16 03:47:10] 2026-03-16 02:46:26,957 | INFO     | intersect: -20917975509.427025
[2026-03-16 03:47:10] 2026-03-16 02:46:26,957 | INFO     | chi2: 6.581850610955007
[2026-03-16 03:47:10] 2026-03-16 02:46:26,958 | INFO     | sum of square deviations: 5513070810.0
[2026-03-16 03:47:10] 2026-03-16 02:46:26,960 | INFO     | sum of deviations: 85573409945.99998
[2026-03-16 03:47:10] 2026-03-16 02:46:26,960 | INFO     | mean x: 1773620886.0
[2026-03-16 03:47:10] 2026-03-16 02:46:26,960 | INFO     | mean y: 2467470.5670498083
[2026-03-16 03:47:10] 2026-03-16 02:46:26,960 | INFO     | intersect: -27527523055.069912
[2026-03-16 03:47:10] 2026-03-16 02:46:26,960 | INFO     | chi2: 5.822426203045414
[2026-03-16 03:47:10] 2026-03-16 02:46:26,961 | INFO     | current chi2=5.822426203045414 (change=11.538159292852777 %)
[2026-03-16 03:47:10] 2026-03-16 02:46:26,961 | INFO     | right removable region: 260
[2026-03-16 03:47:10] 2026-03-16 02:46:26,961 | INFO     | sum of square deviations: 5513070810.0
[2026-03-16 03:47:10] 2026-03-16 02:46:26,963 | INFO     | sum of deviations: -23011633777.999996
[2026-03-16 03:47:10] 2026-03-16 02:46:26,963 | INFO     | mean x: 1773621191.0
[2026-03-16 03:47:10] 2026-03-16 02:46:26,963 | INFO     | mean y: 2503037.459770115
[2026-03-16 03:47:10] 2026-03-16 02:46:26,964 | INFO     | intersect: 7405622408.638714
[2026-03-16 03:47:10] 2026-03-16 02:46:26,964 | INFO     | chi2: 1.935918571572004
[2026-03-16 03:47:10] 2026-03-16 02:46:26,964 | INFO     | current chi2=1.935918571572004 (change=70.58701745144732 %)
[2026-03-16 03:47:10] 2026-03-16 02:46:26,964 | INFO     | sum of square deviations: 5202255680.0
[2026-03-16 03:47:10] 2026-03-16 02:46:26,973 | INFO     | sum of deviations: -58011746426.5
[2026-03-16 03:47:10] 2026-03-16 02:46:26,973 | INFO     | mean x: 1773621343.5
[2026-03-16 03:47:10] 2026-03-16 02:46:26,973 | INFO     | mean y: 2520096.89453125
[2026-03-16 03:47:10] 2026-03-16 02:46:26,973 | INFO     | intersect: 19780646733.63651
[2026-03-16 03:47:10] 2026-03-16 02:46:26,974 | INFO     | chi2: 1.0068145765001966
[2026-03-16 03:47:10] 2026-03-16 02:46:26,974 | INFO     | current chi2=1.0068145765001966 (change=47.992927425524755 %)
[2026-03-16 03:47:10] 2026-03-16 02:46:26,974 | INFO     | sum of square deviations: 4903347750.0
[2026-03-16 03:47:10] 2026-03-16 02:46:26,976 | INFO     | sum of deviations: -62105845149.00001
[2026-03-16 03:47:10] 2026-03-16 02:46:26,976 | INFO     | mean x: 1773621496.0
[2026-03-16 03:47:10] 2026-03-16 02:46:26,976 | INFO     | mean y: 2522168.665338645
[2026-03-16 03:47:10] 2026-03-16 02:46:26,976 | INFO     | intersect: 22467227427.131607
[2026-03-16 03:47:10] 2026-03-16 02:46:26,977 | INFO     | chi2: 0.9740047056587922
[2026-03-16 03:47:10] 2026-03-16 02:46:26,977 | INFO     | current chi2=0.9740047056587922 (change=3.258779879355273 %)
[2026-03-16 03:47:10] 2026-03-16 02:46:26,977 | INFO     | left removable region: 30
[2026-03-16 03:47:10] 2026-03-16 02:46:26,977 | INFO     | sum of square deviations: 3772712597.5
[2026-03-16 03:47:10] 2026-03-16 02:46:26,979 | INFO     | sum of deviations: -26006503381.0
[2026-03-16 03:47:10] 2026-03-16 02:46:26,979 | INFO     | mean x: 1773621770.5
[2026-03-16 03:47:10] 2026-03-16 02:46:26,979 | INFO     | mean y: 2521412.9217391303
[2026-03-16 03:47:10] 2026-03-16 02:46:26,980 | INFO     | intersect: 12228658278.39323
[2026-03-16 03:47:10] 2026-03-16 02:46:26,980 | INFO     | chi2: 0.11830011015990742
[2026-03-16 03:47:10] 2026-03-16 02:46:26,980 | INFO     | current memory leak: -6.89 B/s (using 230 data points, chi2=0.12)
[2026-03-16 03:47:10] 2026-03-16 02:46:26,981 | INFO     | could have reported an average CPU frequency of 2249 MHz (13 samples)
[2026-03-16 03:47:10] 2026-03-16 02:46:26,981 | INFO     | ..............................
[2026-03-16 03:47:10] 2026-03-16 02:46:26,981 | INFO     | . Timing measurements:
[2026-03-16 03:47:10] 2026-03-16 02:46:26,981 | INFO     | . get job = 0 s
[2026-03-16 03:47:10] 2026-03-16 02:46:26,981 | INFO     | . initial setup = 104 s
[2026-03-16 03:47:10] 2026-03-16 02:46:26,981 | INFO     | . payload setup = 127 s
[2026-03-16 03:47:10] 2026-03-16 02:46:26,981 | INFO     | . stage-in = 0 s
[2026-03-16 03:47:10] 2026-03-16 02:46:26,981 | INFO     | . payload execution = 16343 s
[2026-03-16 03:47:10] 2026-03-16 02:46:26,981 | INFO     | . stage-out = 3 s
[2026-03-16 03:47:10] 2026-03-16 02:46:26,981 | INFO     | . log creation = 1 s
[2026-03-16 03:47:10] 2026-03-16 02:46:26,982 | INFO     | ..............................
[2026-03-16 03:47:10] 2026-03-16 02:46:27,139 | INFO     | time since job start (16495s) is within the limit (345600.0s)
[2026-03-16 03:47:10] 2026-03-16 02:46:27,143 | INFO     | 
[2026-03-16 03:47:10] 2026-03-16 02:46:27,143 | INFO     | job summary report
[2026-03-16 03:47:10] 2026-03-16 02:46:27,143 | INFO     | --------------------------------------------------
[2026-03-16 03:47:10] 2026-03-16 02:46:27,143 | INFO     | PanDA job id: 7056217342
[2026-03-16 03:47:10] 2026-03-16 02:46:27,143 | INFO     | task id: 48967085
[2026-03-16 03:47:10] 2026-03-16 02:46:27,143 | INFO     | errors: (none)
[2026-03-16 03:47:10] 2026-03-16 02:46:27,144 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-16 03:47:10] 2026-03-16 02:46:27,144 | INFO     | pilot state: finished 
[2026-03-16 03:47:10] 2026-03-16 02:46:27,144 | INFO     | transexitcode: 0
[2026-03-16 03:47:10] 2026-03-16 02:46:27,144 | INFO     | exeerrorcode: 0
[2026-03-16 03:47:10] 2026-03-16 02:46:27,144 | INFO     | exeerrordiag: 
[2026-03-16 03:47:10] 2026-03-16 02:46:27,144 | INFO     | exitcode: 0
[2026-03-16 03:47:10] 2026-03-16 02:46:27,144 | INFO     | exitmsg: OK
[2026-03-16 03:47:10] 2026-03-16 02:46:27,144 | INFO     | cpuconsumptiontime: 62965 s
[2026-03-16 03:47:10] 2026-03-16 02:46:27,144 | INFO     | nevents: 400
[2026-03-16 03:47:10] 2026-03-16 02:46:27,144 | INFO     | neventsw: 0
[2026-03-16 03:47:10] 2026-03-16 02:46:27,145 | INFO     | pid: 12606
[2026-03-16 03:47:10] 2026-03-16 02:46:27,145 | INFO     | pgrp: 12606
[2026-03-16 03:47:10] 2026-03-16 02:46:27,145 | INFO     | corecount: 8
[2026-03-16 03:47:10] 2026-03-16 02:46:27,145 | INFO     | event service: False
[2026-03-16 03:47:10] 2026-03-16 02:46:27,145 | INFO     | sizes: {0: 2279811, 1: 2280272, 12: 2280272, 16475: 2311729, 16479: 2320727, 16482: 2321105}
[2026-03-16 03:47:10] 2026-03-16 02:46:27,145 | INFO     | --------------------------------------------------
[2026-03-16 03:47:10] 2026-03-16 02:46:27,145 | INFO     | 
[2026-03-16 03:47:10] 2026-03-16 02:46:27,145 | INFO     | executing command: ls -lF /var/lib/boinc/slots/1
[2026-03-16 03:47:10] 2026-03-16 02:46:27,636 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-16 03:47:10] 2026-03-16 02:46:27,637 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-16 03:47:10] 2026-03-16 02:46:27,637 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-16 03:47:10] 2026-03-16 02:46:27,637 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-16 03:47:10] 2026-03-16 02:46:27,637 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-16 03:47:10] 2026-03-16 02:46:27,637 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-16 03:47:10] 2026-03-16 02:46:27,637 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-16 03:47:10] 2026-03-16 02:46:27,637 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-16 03:47:10] 2026-03-16 02:46:27,637 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-16 03:47:10] 2026-03-16 02:46:27,637 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-16 03:47:10] 2026-03-16 02:46:27,638 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-16 03:47:10] 2026-03-16 02:46:27,638 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-16 03:47:10] 2026-03-16 02:46:27,638 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-16 03:47:10] 2026-03-16 02:46:27,638 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-16 03:47:10] 2026-03-16 02:46:27,638 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-16 03:47:10] 2026-03-16 02:46:27,638 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-16 03:47:10] 2026-03-16 02:46:27,638 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-16 03:47:10] 2026-03-16 02:46:27,638 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-16 03:47:10] 2026-03-16 02:46:27,638 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-16 03:47:10] 2026-03-16 02:46:27,638 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-16 03:47:10] 2026-03-16 02:46:27,639 | INFO     | job 7056217342 has completed (purged errors)
[2026-03-16 03:47:10] 2026-03-16 02:46:27,639 | INFO     | overall cleanup function is called
[2026-03-16 03:47:10] 2026-03-16 02:46:28,647 | INFO     | --- collectZombieJob: --- 10, [12606]
[2026-03-16 03:47:10] 2026-03-16 02:46:28,647 | INFO     | zombie collector waiting for pid 12606
[2026-03-16 03:47:10] 2026-03-16 02:46:28,647 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-16 03:47:10] 2026-03-16 02:46:28,647 | INFO     | collected zombie processes
[2026-03-16 03:47:10] 2026-03-16 02:46:28,647 | INFO     | will attempt to kill all subprocesses of pid=12606
[2026-03-16 03:47:10] 2026-03-16 02:46:28,737 | INFO     | process IDs to be killed: [12606] (in reverse order)
[2026-03-16 03:47:10] 2026-03-16 02:46:29,523 | WARNING  | found no corresponding commands to process id(s)
[2026-03-16 03:47:10] 2026-03-16 02:46:29,524 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-16 03:47:10] 2026-03-16 02:46:29,526 | INFO     | did not find any defunct processes belonging to 12606
[2026-03-16 03:47:10] 2026-03-16 02:46:29,529 | INFO     | did not find any defunct processes belonging to 12606
[2026-03-16 03:47:10] 2026-03-16 02:46:29,529 | INFO     | ready for new job
[2026-03-16 03:47:10] 2026-03-16 02:46:29,529 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-16 03:47:10] 2026-03-16 02:46:29,531 | INFO     | **************************************
[2026-03-16 03:47:10] 2026-03-16 02:46:29,531 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-16 03:47:10] 2026-03-16 02:46:29,532 | INFO     | **************************************
[2026-03-16 03:47:10] 2026-03-16 02:46:29,532 | INFO     | 
[2026-03-16 03:47:10] 2026-03-16 02:46:29,532 | INFO     | pilot is running in a VM
[2026-03-16 03:47:10] 2026-03-16 02:46:29,532 | INFO     | architecture information:
[2026-03-16 03:47:10] 2026-03-16 02:46:29,538 | INFO     | executing command: cat /etc/os-release
[2026-03-16 03:47:10] 2026-03-16 02:46:29,884 | INFO     | cat /etc/os-release:
[2026-03-16 03:47:10] NAME="CentOS Linux"
[2026-03-16 03:47:10] VERSION="7 (Core)"
[2026-03-16 03:47:10] ID="centos"
[2026-03-16 03:47:10] ID_LIKE="rhel fedora"
[2026-03-16 03:47:10] VERSION_ID="7"
[2026-03-16 03:47:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-16 03:47:10] ANSI_COLOR="0;31"
[2026-03-16 03:47:10] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-16 03:47:10] HOME_URL="https://www.centos.org/"
[2026-03-16 03:47:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-16 03:47:10] 
[2026-03-16 03:47:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-16 03:47:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-16 03:47:10] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-16 03:47:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-16 03:47:10] 
[2026-03-16 03:47:10] 2026-03-16 02:46:29,884 | INFO     | **************************************
[2026-03-16 03:47:10] 2026-03-16 02:46:30,388 | INFO     | executing command: df -mP /var/lib/boinc/slots/1
[2026-03-16 03:47:10] 2026-03-16 02:46:30,625 | INFO     | sufficient remaining disk space (496500736000 B)
[2026-03-16 03:47:10] 2026-03-16 02:46:30,626 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-16 03:47:10] 2026-03-16 02:46:30,626 | INFO     | current server update state: UPDATING_FINAL
[2026-03-16 03:47:10] 2026-03-16 02:46:30,626 | INFO     | update_server=False
[2026-03-16 03:47:10] 2026-03-16 02:46:30,626 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-16 03:47:10] 2026-03-16 02:46:30,629 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-16 03:47:10] 2026-03-16 02:46:30,629 | INFO     | aborting loop
[2026-03-16 03:47:10] 2026-03-16 02:46:30,824 | INFO     | all job control threads have been joined
[2026-03-16 03:47:10] 2026-03-16 02:46:30,987 | INFO     | all data control threads have been joined
[2026-03-16 03:47:10] 2026-03-16 02:46:31,634 | INFO     | [job] retrieve thread has finished
[2026-03-16 03:47:10] 2026-03-16 02:46:31,638 | INFO     | [job] job monitor thread has finished
[2026-03-16 03:47:10] 2026-03-16 02:46:31,670 | INFO     | [payload] failed_post thread has finished
[2026-03-16 03:47:10] 2026-03-16 02:46:31,776 | INFO     | [data] copytool_in thread has finished
[2026-03-16 03:47:10] 2026-03-16 02:46:31,830 | INFO     | [job] control thread has finished
[2026-03-16 03:47:10] 2026-03-16 02:46:31,858 | INFO     | all payload control threads have been joined
[2026-03-16 03:47:10] 2026-03-16 02:46:31,881 | INFO     | [payload] execute_payloads thread has finished
[2026-03-16 03:47:10] 2026-03-16 02:46:31,992 | INFO     | [data] control thread has finished
[2026-03-16 03:47:10] 2026-03-16 02:46:32,055 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-16 03:47:10] 2026-03-16 02:46:32,113 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-16 03:47:10] 2026-03-16 02:46:32,152 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-16 03:47:10] 2026-03-16 02:46:32,372 | INFO     | [payload] validate_pre thread has finished
[2026-03-16 03:47:10] 2026-03-16 02:46:32,458 | INFO     | [job] create_data_payload thread has finished
[2026-03-16 03:47:10] 2026-03-16 02:46:32,672 | INFO     | [job] validate thread has finished
[2026-03-16 03:47:10] 2026-03-16 02:46:32,693 | INFO     | [payload] validate_post thread has finished
[2026-03-16 03:47:10] 2026-03-16 02:46:32,864 | INFO     | [payload] control thread has finished
[2026-03-16 03:47:10] 2026-03-16 02:46:32,945 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-16 03:47:10] 2026-03-16 02:46:33,158 | INFO     | [job] queue monitor thread has finished
[2026-03-16 03:47:10] 2026-03-16 02:46:34,122 | INFO     | [data] copytool_out thread has finished
[2026-03-16 03:47:10] 2026-03-16 02:46:36,953 | INFO     | [data] queue_monitor thread has finished
[2026-03-16 03:47:10] 2026-03-16 02:47:00,180 | INFO     | [monitor] cgroup control has ended
[2026-03-16 03:47:10] 2026-03-16 02:47:00,315 | INFO     | PID=8099 has CPU usage=4.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-03-16 03:47:10] 2026-03-16 02:47:00,316 | INFO     | .. there are 9 such processes running
[2026-03-16 03:47:10] 2026-03-16 02:47:00,317 | INFO     | found 0 job(s) in 20 queues
[2026-03-16 03:47:10] 2026-03-16 02:47:00,317 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-16 03:47:10] 2026-03-16 02:47:00,317 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-16 03:47:10] 2026-03-16 02:47:00,831 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140243004954432)>', '<ExcThread(monitor, started 140242786891520)>']
[2026-03-16 03:47:10] 2026-03-16 02:47:01,323 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-16 03:47:10] 2026-03-16 02:47:01,323 | INFO     | [monitor] control thread has ended
[2026-03-16 03:47:10] 2026-03-16 02:47:05,857 | INFO     | all workflow threads have been joined
[2026-03-16 03:47:10] 2026-03-16 02:47:05,857 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-16 03:47:10] 2026-03-16 02:47:05,857 | INFO     | traces error code: 0
[2026-03-16 03:47:10] 2026-03-16 02:47:05,858 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-16 03:47:10] 2026-03-16 02:47:06,282 [wrapper] ==== pilot stdout END ====
[2026-03-16 03:47:10] 2026-03-16 02:47:06,380 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-16 03:47:10] 2026-03-16 02:47:06,444 [wrapper] pilotpid: 8099
[2026-03-16 03:47:10] 2026-03-16 02:47:06,551 [wrapper] Pilot exit status: 0
[2026-03-16 03:47:10] 2026-03-16 02:47:07,078 [wrapper] pandaids: 7056217342
[2026-03-16 03:47:10] 2026-03-16 02:47:08,187 [wrapper] cleanup supervisor_pilot 21253 8100
[2026-03-16 03:47:10] 2026-03-16 02:47:08,258 [wrapper] Test setup, not cleaning
[2026-03-16 03:47:10] 2026-03-16 02:47:08,323 [wrapper] apfmon messages muted
[2026-03-16 03:47:10] 2026-03-16 02:47:08,365 [wrapper] ==== wrapper stdout END ====
[2026-03-16 03:47:10] 2026-03-16 02:47:08,444 [wrapper] ==== wrapper stderr END ====
[2026-03-16 03:47:10]  *** Error codes and diagnostics ***
[2026-03-16 03:47:10]     "exeErrorCode": 0,
[2026-03-16 03:47:10]     "exeErrorDiag": "",
[2026-03-16 03:47:10]     "pilotErrorCode": 0,
[2026-03-16 03:47:10]     "pilotErrorDiag": "",
[2026-03-16 03:47:10]  *** Listing of results directory ***
[2026-03-16 03:47:10] total 415872
[2026-03-16 03:47:10] -rw-r--r--. 1 boinc boinc      5111 Mar 15 23:03 queuedata.json
[2026-03-16 03:47:10] -rw-r--r--. 1 boinc boinc    585013 Mar 15 23:03 pilot3.tar.gz
[2026-03-16 03:47:10] -rwx------. 1 boinc boinc     36322 Mar 15 23:03 runpilot2-wrapper.sh
[2026-03-16 03:47:10] -rw-r--r--. 1 boinc boinc       100 Mar 15 23:06 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-16 03:47:10] -rwxr-xr-x. 1 boinc boinc      7986 Mar 15 23:06 run_atlas
[2026-03-16 03:47:10] -rw-r--r--. 1 boinc boinc       105 Mar 15 23:06 job.xml
[2026-03-16 03:47:10] -rw-r--r--. 1 boinc boinc      6391 Mar 15 23:06 init_data.xml
[2026-03-16 03:47:10] -rw-r--r--. 2 boinc boinc 215881758 Mar 15 23:06 EVNT.48967083._000969.pool.root.1
[2026-03-16 03:47:10] -rw-r--r--. 2 boinc boinc     15845 Mar 15 23:06 start_atlas.sh
[2026-03-16 03:47:10] drwxrwx--x. 2 boinc boinc        68 Mar 15 23:06 shared
[2026-03-16 03:47:10] -rw-r--r--. 2 boinc boinc    597524 Mar 15 23:06 input.tar.gz
[2026-03-16 03:47:10] -rw-r--r--. 1 boinc boinc         0 Mar 15 23:06 boinc_lockfile
[2026-03-16 03:47:10] -rw-r--r--. 1 boinc boinc      2565 Mar 15 23:06 pandaJob.out
[2026-03-16 03:47:10] -rw-------. 1 boinc boinc       415 Mar 15 23:11 workernode_map.json
[2026-03-16 03:47:10] -rw-------. 1 boinc boinc   1006457 Mar 15 23:11 agis_schedconf.cvmfs.json
[2026-03-16 03:47:10] drwx------. 5 boinc boinc      4096 Mar 15 23:11 pilot3
[2026-03-16 03:47:10] -rw-------. 1 boinc boinc 200475780 Mar 16 03:45 HITS.48967085._024228.pool.root.1
[2026-03-16 03:47:10] -rw-r--r--. 1 boinc boinc       530 Mar 16 03:45 boinc_task_state.xml
[2026-03-16 03:47:10] -rw-------. 1 boinc boinc      1014 Mar 16 03:46 memory_monitor_summary.json
[2026-03-16 03:47:10] -rw-------. 1 boinc boinc   1511579 Mar 16 03:46 agis_ddmendpoints.agis.ALL.json
[2026-03-16 03:47:10] -rw-------. 1 boinc boinc    482060 Mar 16 03:46 log.48967085._024228.job.log.tgz.1
[2026-03-16 03:47:10] -rw-------. 1 boinc boinc      6319 Mar 16 03:46 heartbeat.json
[2026-03-16 03:47:10] -rw-r--r--. 1 boinc boinc        28 Mar 16 03:46 wrapper_checkpoint.txt
[2026-03-16 03:47:10] -rw-r--r--. 1 boinc boinc      8192 Mar 16 03:46 boinc_mmap_file
[2026-03-16 03:47:10] -rw-------. 1 boinc boinc        95 Mar 16 03:47 pilot_heartbeat.json
[2026-03-16 03:47:10] -rw-------. 1 boinc boinc      4879 Mar 16 03:47 pilotlog.txt
[2026-03-16 03:47:10] -rw-------. 1 boinc boinc   2305552 Mar 16 03:47 log.48967085._024228.job.log.1
[2026-03-16 03:47:10] -rw-------. 1 boinc boinc       357 Mar 16 03:47 output.list
[2026-03-16 03:47:10] -rw-r--r--. 1 boinc boinc       620 Mar 16 03:47 runtime_log
[2026-03-16 03:47:10] -rw-------. 1 boinc boinc   2805760 Mar 16 03:47 result.tar.gz
[2026-03-16 03:47:10] -rw-------. 1 boinc boinc       656 Mar 16 03:47 wy2KDmSj8L9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmpavLDmVShvIo.diag
[2026-03-16 03:47:10] -rw-r--r--. 1 boinc boinc      8816 Mar 16 03:47 runtime_log.err
[2026-03-16 03:47:10] -rw-r--r--. 1 boinc boinc     20701 Mar 16 03:47 stderr.txt
[2026-03-16 03:47:10] HITS file was successfully produced:
[2026-03-16 03:47:10] -rw-------. 1 boinc boinc 200475780 Mar 16 03:45 shared/HITS.pool.root.1
[2026-03-16 03:47:10]  *** Contents of shared directory: ***
[2026-03-16 03:47:10] total 409944
[2026-03-16 03:47:10] -rw-r--r--. 2 boinc boinc 215881758 Mar 15 23:06 ATLAS.root_0
[2026-03-16 03:47:10] -rw-r--r--. 2 boinc boinc     15845 Mar 15 23:06 start_atlas.sh
[2026-03-16 03:47:10] -rw-r--r--. 2 boinc boinc    597524 Mar 15 23:06 input.tar.gz
[2026-03-16 03:47:10] -rw-------. 1 boinc boinc 200475780 Mar 16 03:45 HITS.pool.root.1
[2026-03-16 03:47:10] -rw-------. 1 boinc boinc   2805760 Mar 16 03:47 result.tar.gz
03:47:12 (4012): run_atlas exited; CPU time 63193.352619
03:47:12 (4012): called boinc_finish(0)

</stderr_txt>
]]>

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