Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:10:23 (1931490): wrapper (7.7.26015): starting
03:10:23 (1931490): wrapper: running run_atlas (--nthreads 4)
[2026-03-19 03:10:23] Arguments: --nthreads 4
[2026-03-19 03:10:23] Threads: 4
[2026-03-19 03:10:23] Checking for CVMFS
[2026-03-19 03:10:23] No cvmfs_config command found, will try listing directly
[2026-03-19 03:10:23] CVMFS is ok
[2026-03-19 03:10:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-19 03:10:23] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-19 03:10:23] Further information can be found at the LHC@home message board.
[2026-03-19 03:10:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-19 03:10:23] Checking for apptainer binary...
[2026-03-19 03:10:23] which: no apptainer in ((null))
[2026-03-19 03:10:23] apptainer is not installed, using version from CVMFS
[2026-03-19 03:10:23] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-19 03:10:23] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot20/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment ugluk10.grid.cesnet.cz
[2026-03-19 03:10:23] apptainer works
[2026-03-19 03:10:23] Set ATHENA_PROC_NUMBER=4
[2026-03-19 03:10:23] Set ATHENA_CORE_NUMBER=4
[2026-03-19 03:10:23] Starting ATLAS job with PandaID=7056217115
[2026-03-19 03:10:23] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot20/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-19 08:08:22]  *** The last 200 lines of the pilot log: ***
[2026-03-19 08:08:22] 2026-03-19 06:41:23,457 | INFO     | job 7056217115 has state=finished
[2026-03-19 08:08:22] 2026-03-19 06:41:23,457 | INFO     | preparing for final server update for job 7056217115 in state='finished'
[2026-03-19 08:08:22] 2026-03-19 06:41:23,458 | INFO     | reading metadata from: /var/lib/boinc/var/slot20/slots/0/PanDA_Pilot-7056217115/jobReport.json
[2026-03-19 08:08:22] 2026-03-19 06:41:23,460 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot20/slots/0/workernode_map.json
[2026-03-19 08:08:22] 2026-03-19 06:41:23,461 | INFO     | this job has now completed (state=finished)
[2026-03-19 08:08:22] 2026-03-19 06:41:23,461 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-19 08:08:22] 2026-03-19 06:41:23,461 | INFO     | log transfer has been attempted: DONE
[2026-03-19 08:08:22] 2026-03-19 06:41:23,461 | INFO     | job 7056217115 has finished - writing final server update
[2026-03-19 08:08:22] 2026-03-19 06:41:23,462 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_1481020/.job.ad'
[2026-03-19 08:08:22] 2026-03-19 06:41:23,462 | INFO     | total number of processed events: 400 (read)
[2026-03-19 08:08:22] 2026-03-19 06:41:23,468 | INFO     | using path: /var/lib/boinc/var/slot20/slots/0/PanDA_Pilot-7056217115/memory_monitor_summary.json (trf name=prmon)
[2026-03-19 08:08:22] 2026-03-19 06:41:23,469 | INFO     | extracted standard info from prmon json
[2026-03-19 08:08:22] 2026-03-19 06:41:23,469 | INFO     | extracted standard memory fields from prmon json
[2026-03-19 08:08:22] 2026-03-19 06:41:23,469 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-19 08:08:22] 2026-03-19 06:41:23,470 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-19 08:08:22] 2026-03-19 06:41:23,470 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-19 08:08:22] 2026-03-19 06:41:23,475 | INFO     | fitting pss+swap vs Time
[2026-03-19 08:08:22] 2026-03-19 06:41:23,476 | INFO     | sum of square deviations: 5836025702.5
[2026-03-19 08:08:22] 2026-03-19 06:41:23,478 | INFO     | sum of deviations: 158610034.49999774
[2026-03-19 08:08:22] 2026-03-19 06:41:23,478 | INFO     | mean x: 1773894347.5
[2026-03-19 08:08:22] 2026-03-19 06:41:23,479 | INFO     | mean y: 2352260.1240601502
[2026-03-19 08:08:22] 2026-03-19 06:41:23,479 | INFO     | intersect: -45858193.01630211
[2026-03-19 08:08:22] 2026-03-19 06:41:23,479 | INFO     | chi2: 1.3339324005389894
[2026-03-19 08:08:22] 2026-03-19 06:41:23,480 | INFO     | sum of square deviations: 5513070810.0
[2026-03-19 08:08:22] 2026-03-19 06:41:23,482 | INFO     | sum of deviations: 289526922.99999535
[2026-03-19 08:08:22] 2026-03-19 06:41:23,482 | INFO     | mean x: 1773894195.0
[2026-03-19 08:08:22] 2026-03-19 06:41:23,482 | INFO     | mean y: 2352321.950191571
[2026-03-19 08:08:22] 2026-03-19 06:41:23,483 | INFO     | intersect: -90806308.82130468
[2026-03-19 08:08:22] 2026-03-19 06:41:23,483 | INFO     | chi2: 1.3340683278965437
[2026-03-19 08:08:22] 2026-03-19 06:41:23,483 | INFO     | current chi2=1.3340683278965437 (change=-0.010189973457378857 %)
[2026-03-19 08:08:22] 2026-03-19 06:41:23,483 | INFO     | right removable region: 260
[2026-03-19 08:08:22] 2026-03-19 06:41:23,484 | INFO     | sum of square deviations: 5513070810.0
[2026-03-19 08:08:22] 2026-03-19 06:41:23,486 | INFO     | sum of deviations: -31618488009.000008
[2026-03-19 08:08:22] 2026-03-19 06:41:23,486 | INFO     | mean x: 1773894500.0
[2026-03-19 08:08:22] 2026-03-19 06:41:23,486 | INFO     | mean y: 2367110.417624521
[2026-03-19 08:08:22] 2026-03-19 06:41:23,486 | INFO     | intersect: 10175982489.299557
[2026-03-19 08:08:22] 2026-03-19 06:41:23,487 | INFO     | chi2: 0.06253138614612636
[2026-03-19 08:08:22] 2026-03-19 06:41:23,487 | INFO     | current chi2=0.06253138614612636 (change=95.31225224600138 %)
[2026-03-19 08:08:22] 2026-03-19 06:41:23,487 | INFO     | sum of square deviations: 5202255680.0
[2026-03-19 08:08:22] 2026-03-19 06:41:23,490 | INFO     | sum of deviations: -31789739714.0
[2026-03-19 08:08:22] 2026-03-19 06:41:23,490 | INFO     | mean x: 1773894652.5
[2026-03-19 08:08:22] 2026-03-19 06:41:23,490 | INFO     | mean y: 2367180.4609375
[2026-03-19 08:08:22] 2026-03-19 06:41:23,490 | INFO     | intersect: 10842212961.172638
[2026-03-19 08:08:22] 2026-03-19 06:41:23,490 | INFO     | chi2: 0.055607548359784646
[2026-03-19 08:08:22] 2026-03-19 06:41:23,491 | INFO     | current chi2=0.055607548359784646 (change=11.072580048300468 %)
[2026-03-19 08:08:22] 2026-03-19 06:41:23,491 | INFO     | left removable region: 20
[2026-03-19 08:08:22] 2026-03-19 06:41:23,491 | INFO     | sum of square deviations: 4286517580.0
[2026-03-19 08:08:22] 2026-03-19 06:41:23,493 | INFO     | sum of deviations: -25194507981.000008
[2026-03-19 08:08:22] 2026-03-19 06:41:23,493 | INFO     | mean x: 1773894774.5
[2026-03-19 08:08:22] 2026-03-19 06:41:23,493 | INFO     | mean y: 2364473.9916666667
[2026-03-19 08:08:22] 2026-03-19 06:41:23,494 | INFO     | intersect: 10428638301.053507
[2026-03-19 08:08:22] 2026-03-19 06:41:23,494 | INFO     | chi2: 0.05298806260766173
[2026-03-19 08:08:22] 2026-03-19 06:41:23,494 | INFO     | current memory leak: -5.88 B/s (using 240 data points, chi2=0.05)
[2026-03-19 08:08:22] 2026-03-19 06:41:23,495 | INFO     | could have reported an average CPU frequency of 2612 MHz (12 samples)
[2026-03-19 08:08:22] 2026-03-19 06:41:23,495 | INFO     | ..............................
[2026-03-19 08:08:22] 2026-03-19 06:41:23,495 | INFO     | . Timing measurements:
[2026-03-19 08:08:22] 2026-03-19 06:41:23,495 | INFO     | . get job = 0 s
[2026-03-19 08:08:22] 2026-03-19 06:41:23,495 | INFO     | . initial setup = 4 s
[2026-03-19 08:08:22] 2026-03-19 06:41:23,495 | INFO     | . payload setup = 9 s
[2026-03-19 08:08:22] 2026-03-19 06:41:23,496 | INFO     | . stage-in = 0 s
[2026-03-19 08:08:22] 2026-03-19 06:41:23,496 | INFO     | . payload execution = 16212 s
[2026-03-19 08:08:22] 2026-03-19 06:41:23,496 | INFO     | . stage-out = 1 s
[2026-03-19 08:08:22] 2026-03-19 06:41:23,496 | INFO     | . log creation = 0 s
[2026-03-19 08:08:22] 2026-03-19 06:41:23,496 | INFO     | ..............................
[2026-03-19 08:08:22] 2026-03-19 06:41:23,599 | INFO     | 
[2026-03-19 08:08:22] 2026-03-19 06:41:23,599 | INFO     | job summary report
[2026-03-19 08:08:22] 2026-03-19 06:41:23,599 | INFO     | --------------------------------------------------
[2026-03-19 08:08:22] 2026-03-19 06:41:23,600 | INFO     | PanDA job id: 7056217115
[2026-03-19 08:08:22] 2026-03-19 06:41:23,600 | INFO     | task id: 48967085
[2026-03-19 08:08:22] 2026-03-19 06:41:23,600 | INFO     | errors: (none)
[2026-03-19 08:08:22] 2026-03-19 06:41:23,600 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-19 08:08:22] 2026-03-19 06:41:23,600 | INFO     | pilot state: finished 
[2026-03-19 08:08:22] 2026-03-19 06:41:23,600 | INFO     | transexitcode: 0
[2026-03-19 08:08:22] 2026-03-19 06:41:23,600 | INFO     | exeerrorcode: 0
[2026-03-19 08:08:22] 2026-03-19 06:41:23,600 | INFO     | exeerrordiag: 
[2026-03-19 08:08:22] 2026-03-19 06:41:23,601 | INFO     | exitcode: 0
[2026-03-19 08:08:22] 2026-03-19 06:41:23,601 | INFO     | exitmsg: OK
[2026-03-19 08:08:22] 2026-03-19 06:41:23,601 | INFO     | cpuconsumptiontime: 61324 s
[2026-03-19 08:08:22] 2026-03-19 06:41:23,601 | INFO     | nevents: 400
[2026-03-19 08:08:22] 2026-03-19 06:41:23,601 | INFO     | neventsw: 0
[2026-03-19 08:08:22] 2026-03-19 06:41:23,601 | INFO     | pid: 1940021
[2026-03-19 08:08:22] 2026-03-19 06:41:23,601 | INFO     | pgrp: 1940021
[2026-03-19 08:08:22] 2026-03-19 06:41:23,601 | INFO     | corecount: 4
[2026-03-19 08:08:22] 2026-03-19 06:41:23,601 | INFO     | event service: False
[2026-03-19 08:08:22] 2026-03-19 06:41:23,602 | INFO     | sizes: {0: 2280047, 1: 2280253, 11: 2280281, 16226: 2311588, 16228: 2320608, 16230: 2320664, 16232: 2320986}
[2026-03-19 08:08:22] 2026-03-19 06:41:23,602 | INFO     | --------------------------------------------------
[2026-03-19 08:08:22] 2026-03-19 06:41:23,602 | INFO     | 
[2026-03-19 08:08:22] 2026-03-19 06:41:23,602 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot20/slots/0
[2026-03-19 08:08:22] 2026-03-19 06:41:23,622 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-19 08:08:22] 2026-03-19 06:41:23,623 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-19 08:08:22] 2026-03-19 06:41:23,623 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-19 08:08:22] 2026-03-19 06:41:23,623 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-19 08:08:22] 2026-03-19 06:41:23,623 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-19 08:08:22] 2026-03-19 06:41:23,623 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-19 08:08:22] 2026-03-19 06:41:23,624 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-19 08:08:22] 2026-03-19 06:41:23,624 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-19 08:08:22] 2026-03-19 06:41:23,624 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-19 08:08:22] 2026-03-19 06:41:23,624 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-19 08:08:22] 2026-03-19 06:41:23,624 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-19 08:08:22] 2026-03-19 06:41:23,624 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-19 08:08:22] 2026-03-19 06:41:23,624 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-19 08:08:22] 2026-03-19 06:41:23,624 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-19 08:08:22] 2026-03-19 06:41:23,625 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-19 08:08:22] 2026-03-19 06:41:23,625 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-19 08:08:22] 2026-03-19 06:41:23,625 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-19 08:08:22] 2026-03-19 06:41:23,625 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-19 08:08:22] 2026-03-19 06:41:23,625 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-19 08:08:22] 2026-03-19 06:41:23,625 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-19 08:08:22] 2026-03-19 06:41:23,625 | INFO     | job 7056217115 has completed (purged errors)
[2026-03-19 08:08:22] 2026-03-19 06:41:23,626 | INFO     | overall cleanup function is called
[2026-03-19 08:08:22] 2026-03-19 06:41:24,633 | INFO     | --- collectZombieJob: --- 10, [1940021]
[2026-03-19 08:08:22] 2026-03-19 06:41:24,633 | INFO     | zombie collector waiting for pid 1940021
[2026-03-19 08:08:22] 2026-03-19 06:41:24,633 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-19 08:08:22] 2026-03-19 06:41:24,633 | INFO     | collected zombie processes
[2026-03-19 08:08:22] 2026-03-19 06:41:24,633 | INFO     | will attempt to kill all subprocesses of pid=1940021
[2026-03-19 08:08:22] 2026-03-19 06:41:24,906 | INFO     | process IDs to be killed: [1940021] (in reverse order)
[2026-03-19 08:08:22] 2026-03-19 06:41:24,987 | WARNING  | found no corresponding commands to process id(s)
[2026-03-19 08:08:22] 2026-03-19 06:41:24,987 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-19 08:08:22] 2026-03-19 06:41:24,995 | INFO     | did not find any defunct processes belonging to 1940021
[2026-03-19 08:08:22] 2026-03-19 06:41:25,003 | INFO     | did not find any defunct processes belonging to 1940021
[2026-03-19 08:08:22] 2026-03-19 06:41:25,003 | INFO     | ready for new job
[2026-03-19 08:08:22] 2026-03-19 06:41:25,003 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-19 08:08:22] 2026-03-19 06:41:25,005 | INFO     | **************************************
[2026-03-19 08:08:22] 2026-03-19 06:41:25,005 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-19 08:08:22] 2026-03-19 06:41:25,006 | INFO     | **************************************
[2026-03-19 08:08:22] 2026-03-19 06:41:25,006 | INFO     | 
[2026-03-19 08:08:22] 2026-03-19 06:41:25,008 | INFO     | architecture information:
[2026-03-19 08:08:22] 2026-03-19 06:41:25,008 | INFO     | executing command: cat /etc/os-release
[2026-03-19 08:08:22] 2026-03-19 06:41:25,023 | INFO     | cat /etc/os-release:
[2026-03-19 08:08:22] NAME="CentOS Linux"
[2026-03-19 08:08:22] VERSION="7 (Core)"
[2026-03-19 08:08:22] ID="centos"
[2026-03-19 08:08:22] ID_LIKE="rhel fedora"
[2026-03-19 08:08:22] VERSION_ID="7"
[2026-03-19 08:08:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-19 08:08:22] ANSI_COLOR="0;31"
[2026-03-19 08:08:22] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-19 08:08:22] HOME_URL="https://www.centos.org/"
[2026-03-19 08:08:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-19 08:08:22] 
[2026-03-19 08:08:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-19 08:08:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-19 08:08:22] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-19 08:08:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-19 08:08:22] 
[2026-03-19 08:08:22] 2026-03-19 06:41:25,024 | INFO     | **************************************
[2026-03-19 08:08:22] 2026-03-19 06:41:25,527 | INFO     | executing command: df -mP /var/lib/boinc/var/slot20/slots/0
[2026-03-19 08:08:22] 2026-03-19 06:41:25,542 | INFO     | sufficient remaining disk space (121688293376 B)
[2026-03-19 08:08:22] 2026-03-19 06:41:25,542 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-19 08:08:22] 2026-03-19 06:41:25,543 | INFO     | current server update state: UPDATING_FINAL
[2026-03-19 08:08:22] 2026-03-19 06:41:25,543 | INFO     | update_server=False
[2026-03-19 08:08:22] 2026-03-19 06:41:25,543 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-19 08:08:22] 2026-03-19 06:41:25,543 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-19 08:08:22] 2026-03-19 06:41:25,543 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-19 08:08:22] 2026-03-19 06:41:25,594 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-19 08:08:22] 2026-03-19 06:41:25,594 | INFO     | aborting loop
[2026-03-19 08:08:22] 2026-03-19 06:41:26,364 | INFO     | all data control threads have been joined
[2026-03-19 08:08:22] 2026-03-19 06:41:26,409 | INFO     | all payload control threads have been joined
[2026-03-19 08:08:22] 2026-03-19 06:41:26,548 | INFO     | [job] retrieve thread has finished
[2026-03-19 08:08:22] 2026-03-19 06:41:26,548 | INFO     | [job] queue monitor thread has finished
[2026-03-19 08:08:22] 2026-03-19 06:41:26,599 | INFO     | [job] job monitor thread has finished
[2026-03-19 08:08:22] 2026-03-19 06:41:26,625 | INFO     | [payload] validate_pre thread has finished
[2026-03-19 08:08:22] 2026-03-19 06:41:26,649 | INFO     | [payload] failed_post thread has finished
[2026-03-19 08:08:22] 2026-03-19 06:41:26,649 | INFO     | [payload] validate_post thread has finished
[2026-03-19 08:08:22] 2026-03-19 06:41:27,005 | INFO     | all job control threads have been joined
[2026-03-19 08:08:22] 2026-03-19 06:41:27,246 | INFO     | [job] validate thread has finished
[2026-03-19 08:08:22] 2026-03-19 06:41:27,369 | INFO     | [data] control thread has finished
[2026-03-19 08:08:22] 2026-03-19 06:41:27,415 | INFO     | [payload] control thread has finished
[2026-03-19 08:08:22] 2026-03-19 06:41:27,432 | INFO     | [job] create_data_payload thread has finished
[2026-03-19 08:08:22] 2026-03-19 06:41:27,467 | INFO     | [data] copytool_in thread has finished
[2026-03-19 08:08:22] 2026-03-19 06:41:27,486 | INFO     | [payload] execute_payloads thread has finished
[2026-03-19 08:08:22] 2026-03-19 06:41:27,548 | INFO     | [data] copytool_out thread has finished
[2026-03-19 08:08:22] 2026-03-19 06:41:27,848 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-19 08:08:22] 2026-03-19 06:41:28,010 | INFO     | [job] control thread has finished
[2026-03-19 08:08:22] 2026-03-19 06:41:31,853 | INFO     | [data] queue_monitor thread has finished
[2026-03-19 08:08:22] 2026-03-19 06:41:36,104 | INFO     | job.realtimelogging is not enabled
[2026-03-19 08:08:22] 2026-03-19 06:41:37,109 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-19 08:08:22] 2026-03-19 06:41:55,157 | INFO     | PID=1935443 has CPU usage=6.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-19 08:08:22] 2026-03-19 06:41:55,158 | INFO     | .. there are 5 such processes running
[2026-03-19 08:08:22] 2026-03-19 06:41:55,158 | INFO     | found 0 job(s) in 20 queues
[2026-03-19 08:08:22] 2026-03-19 06:41:55,158 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-19 08:08:22] 2026-03-19 06:41:55,158 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-19 08:08:22] 2026-03-19 06:42:06,933 | INFO     | [monitor] cgroup control has ended
[2026-03-19 08:08:22] 2026-03-19 06:42:06,939 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23168806340416)>', '<ExcThread(monitor, started 23168564860672)>']
[2026-03-19 08:08:22] 2026-03-19 06:42:07,218 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-19 08:08:22] 2026-03-19 06:42:07,218 | INFO     | [monitor] control thread has ended
[2026-03-19 08:08:22] 2026-03-19 06:42:11,964 | INFO     | all workflow threads have been joined
[2026-03-19 08:08:22] 2026-03-19 06:42:11,964 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-19 08:08:22] 2026-03-19 06:42:11,964 | INFO     | traces error code: 0
[2026-03-19 08:08:22] 2026-03-19 06:42:11,965 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-19 08:08:22] 2026-03-19 06:42:12,094 [wrapper] ==== pilot stdout END ====
[2026-03-19 08:08:22] 2026-03-19 06:42:12,097 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-19 08:08:22] 2026-03-19 06:42:12,100 [wrapper] pilotpid: 1935443
[2026-03-19 08:08:22] 2026-03-19 06:42:12,102 [wrapper] Pilot exit status: 0
[2026-03-19 08:08:22] 2026-03-19 06:42:12,114 [wrapper] pandaids: 7056217115
[2026-03-19 08:08:22] 2026-03-19 06:42:12,174 [wrapper] cleanup supervisor_pilot 2069181 1935444
[2026-03-19 08:08:22] 2026-03-19 06:42:12,186 [wrapper] Test setup, not cleaning
[2026-03-19 08:08:22] 2026-03-19 06:42:12,190 [wrapper] apfmon messages muted
[2026-03-19 08:08:22] 2026-03-19 06:42:12,195 [wrapper] ==== wrapper stdout END ====
[2026-03-19 08:08:22] 2026-03-19 06:42:12,198 [wrapper] ==== wrapper stderr END ====
[2026-03-19 08:08:22]  *** Error codes and diagnostics ***
[2026-03-19 08:08:22]     "exeErrorCode": 0,
[2026-03-19 08:08:22]     "exeErrorDiag": "",
[2026-03-19 08:08:22]     "pilotErrorCode": 0,
[2026-03-19 08:08:22]     "pilotErrorDiag": "",
[2026-03-19 08:08:22]  *** Listing of results directory ***
[2026-03-19 08:08:22] total 417552
[2026-03-19 08:08:22] -rw-r--r--. 1 boinc boinc      5111 Mar 15 23:03 queuedata.json
[2026-03-19 08:08:22] -rw-r--r--. 1 boinc boinc    585013 Mar 15 23:03 pilot3.tar.gz
[2026-03-19 08:08:22] -rwx------. 1 boinc boinc     36322 Mar 15 23:03 runpilot2-wrapper.sh
[2026-03-19 08:08:22] -rw-r--r--. 1 boinc boinc       100 Mar 19 03:10 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-19 08:08:22] -rwxr-xr-x. 1 boinc boinc      7986 Mar 19 03:10 run_atlas
[2026-03-19 08:08:22] -rw-r--r--. 1 boinc boinc       105 Mar 19 03:10 job.xml
[2026-03-19 08:08:22] -rw-r--r--. 1 boinc boinc      6346 Mar 19 03:10 init_data.xml
[2026-03-19 08:08:22] -rw-r--r--. 2 boinc boinc 215387990 Mar 19 03:10 EVNT.48967083._000960.pool.root.1
[2026-03-19 08:08:22] -rw-r--r--. 2 boinc boinc     15845 Mar 19 03:10 start_atlas.sh
[2026-03-19 08:08:22] drwxrwx--x. 2 boinc boinc      4096 Mar 19 03:10 shared
[2026-03-19 08:08:22] -rw-r--r--. 2 boinc boinc    597519 Mar 19 03:10 input.tar.gz
[2026-03-19 08:08:22] -rw-r--r--. 1 boinc boinc         0 Mar 19 03:10 boinc_lockfile
[2026-03-19 08:08:22] -rw-r--r--. 1 boinc boinc      2564 Mar 19 03:10 pandaJob.out
[2026-03-19 08:08:22] -rw-------. 1 boinc boinc   1010446 Mar 19 03:10 agis_schedconf.cvmfs.json
[2026-03-19 08:08:22] -rw-------. 1 boinc boinc       445 Mar 19 03:10 workernode_map.json
[2026-03-19 08:08:22] drwx------. 5 boinc boinc      4096 Mar 19 03:10 pilot3
[2026-03-19 08:08:22] -rw-------. 1 boinc boinc 202832818 Mar 19 07:40 HITS.48967085._024002.pool.root.1
[2026-03-19 08:08:22] -rw-r--r--. 1 boinc boinc       529 Mar 19 07:41 boinc_task_state.xml
[2026-03-19 08:08:22] -rw-------. 1 boinc boinc        95 Mar 19 07:41 pilot_heartbeat.json
[2026-03-19 08:08:22] -rw-------. 1 boinc boinc      1029 Mar 19 07:41 memory_monitor_summary.json
[2026-03-19 08:08:22] -rw-------. 1 boinc boinc   1511579 Mar 19 07:41 agis_ddmendpoints.agis.ALL.json
[2026-03-19 08:08:22] -rw-------. 1 boinc boinc    417887 Mar 19 07:41 log.48967085._024002.job.log.tgz.1
[2026-03-19 08:08:22] -rw-------. 1 boinc boinc      6395 Mar 19 07:41 heartbeat.json
[2026-03-19 08:08:22] -rw-------. 1 boinc boinc      4901 Mar 19 07:42 pilotlog.txt
[2026-03-19 08:08:22] -rw-------. 1 boinc boinc   2287045 Mar 19 07:42 log.48967085._024002.job.log.1
[2026-03-19 08:08:22] -rw-------. 1 boinc boinc       357 Mar 19 07:42 output.list
[2026-03-19 08:08:22] -rw-r--r--. 1 boinc boinc       620 Mar 19 07:42 runtime_log
[2026-03-19 08:08:22] -rw-------. 1 boinc boinc   2723840 Mar 19 07:42 result.tar.gz
[2026-03-19 08:08:22] -rw-r--r--. 1 boinc boinc      9200 Mar 19 07:42 runtime_log.err
[2026-03-19 08:08:22] -rw-------. 1 boinc boinc       665 Mar 19 07:42 L1HLDmQj8L9n9Rq4apOajLDm4fhM0noT9bVooX4SDmBUsLDmSq0ZJo.diag
[2026-03-19 08:08:22] -rw-r--r--. 1 boinc boinc        27 Mar 19 08:07 wrapper_checkpoint.txt
[2026-03-19 08:08:22] -rw-r--r--. 1 boinc boinc      8192 Mar 19 08:08 boinc_mmap_file
[2026-03-19 08:08:22] -rw-r--r--. 1 boinc boinc     21119 Mar 19 08:08 stderr.txt
[2026-03-19 08:08:22] HITS file was successfully produced:
[2026-03-19 08:08:22] -rw-------. 1 boinc boinc 202832818 Mar 19 07:40 shared/HITS.pool.root.1
[2026-03-19 08:08:22]  *** Contents of shared directory: ***
[2026-03-19 08:08:22] total 411688
[2026-03-19 08:08:22] -rw-r--r--. 2 boinc boinc 215387990 Mar 19 03:10 ATLAS.root_0
[2026-03-19 08:08:22] -rw-r--r--. 2 boinc boinc     15845 Mar 19 03:10 start_atlas.sh
[2026-03-19 08:08:22] -rw-r--r--. 2 boinc boinc    597519 Mar 19 03:10 input.tar.gz
[2026-03-19 08:08:22] -rw-------. 1 boinc boinc 202832818 Mar 19 07:40 HITS.pool.root.1
[2026-03-19 08:08:22] -rw-------. 1 boinc boinc   2723840 Mar 19 07:42 result.tar.gz
08:08:24 (1931490): run_atlas exited; CPU time 61822.615678
08:08:24 (1931490): called boinc_finish(0)

</stderr_txt>
]]>

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