Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
10:47:38 (28516): wrapper (7.7.26015): starting
10:47:38 (28516): wrapper: running run_atlas (--nthreads 12)
[2026-03-16 10:47:38] Arguments: --nthreads 12
[2026-03-16 10:47:38] Threads: 12
[2026-03-16 10:47:38] Checking for CVMFS
[2026-03-16 10:47:38] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-16 10:47:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-16 10:47:38] Running cvmfs_config stat atlas.cern.ch
[2026-03-16 10:47:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-16 10:47:38] 2.11.2.0 2924 446175 101528 157351 1 74 12467147 20275200 1 130560 4 195103770 99.953 26062199 17184 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-16 10:47:38] CVMFS is ok
[2026-03-16 10:47:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-16 10:47:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-16 10:47:39] Further information can be found at the LHC@home message board.
[2026-03-16 10:47:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-16 10:47:39] Checking for apptainer binary...
[2026-03-16 10:47:39] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-16 10:47:39] Running /usr/bin/apptainer --version
[2026-03-16 10:47:39] apptainer version 1.3.2-1.el7
[2026-03-16 10:47:39] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-16 10:47:40] c-205-28.aglt2.org
[2026-03-16 10:47:40] apptainer works
[2026-03-16 10:47:40] Set ATHENA_PROC_NUMBER=12
[2026-03-16 10:47:40] Set ATHENA_CORE_NUMBER=12
[2026-03-16 10:47:40] Starting ATLAS job with PandaID=7049664074
[2026-03-16 10:47:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-16 13:20:22]  *** The last 200 lines of the pilot log: ***
[2026-03-16 13:20:22] 2026-03-16 17:19:32,706 | INFO     | intersect: -83737464862.16844
[2026-03-16 13:20:22] 2026-03-16 17:19:32,707 | INFO     | chi2: 1.595516541046479
[2026-03-16 13:20:22] 2026-03-16 17:19:32,707 | INFO     | sum of square deviations: 925859220.0
[2026-03-16 13:20:22] 2026-03-16 17:19:32,708 | INFO     | sum of deviations: 46471123517.00001
[2026-03-16 13:20:22] 2026-03-16 17:19:32,708 | INFO     | mean x: 1773676867.5
[2026-03-16 13:20:22] 2026-03-16 17:19:32,708 | INFO     | mean y: 2916348.1805555555
[2026-03-16 13:20:22] 2026-03-16 17:19:32,708 | INFO     | intersect: -89022234569.29712
[2026-03-16 13:20:22] 2026-03-16 17:19:32,708 | INFO     | chi2: 1.5931938013984743
[2026-03-16 13:20:22] 2026-03-16 17:19:32,708 | INFO     | current chi2=1.5931938013984743 (change=0.1455791643802905 %)
[2026-03-16 13:20:22] 2026-03-16 17:19:32,708 | INFO     | right removable region: 143
[2026-03-16 13:20:22] 2026-03-16 17:19:32,709 | INFO     | sum of square deviations: 925859220.0
[2026-03-16 13:20:22] 2026-03-16 17:19:32,709 | INFO     | sum of deviations: 19023284075.999996
[2026-03-16 13:20:22] 2026-03-16 17:19:32,709 | INFO     | mean x: 1773677172.5
[2026-03-16 13:20:22] 2026-03-16 17:19:32,710 | INFO     | mean y: 2963723.1666666665
[2026-03-16 13:20:22] 2026-03-16 17:19:32,710 | INFO     | intersect: -36440119612.53091
[2026-03-16 13:20:22] 2026-03-16 17:19:32,710 | INFO     | chi2: 0.14671402066700745
[2026-03-16 13:20:22] 2026-03-16 17:19:32,710 | INFO     | current chi2=0.14671402066700745 (change=90.80460672812708 %)
[2026-03-16 13:20:22] 2026-03-16 17:19:32,710 | INFO     | sum of square deviations: 832722590.0
[2026-03-16 13:20:22] 2026-03-16 17:19:32,711 | INFO     | sum of deviations: 7115510188.0
[2026-03-16 13:20:22] 2026-03-16 17:19:32,711 | INFO     | mean x: 1773677325.0
[2026-03-16 13:20:22] 2026-03-16 17:19:32,711 | INFO     | mean y: 2983227.2589928056
[2026-03-16 13:20:22] 2026-03-16 17:19:32,711 | INFO     | intersect: -15152867265.835096
[2026-03-16 13:20:22] 2026-03-16 17:19:32,712 | INFO     | chi2: 0.0033383409437298737
[2026-03-16 13:20:22] 2026-03-16 17:19:32,712 | INFO     | current chi2=0.0033383409437298737 (change=97.72459310394962 %)
[2026-03-16 13:20:22] 2026-03-16 17:19:32,712 | INFO     | sum of square deviations: 746051197.5
[2026-03-16 13:20:22] 2026-03-16 17:19:32,713 | INFO     | sum of deviations: 5110999557.999999
[2026-03-16 13:20:22] 2026-03-16 17:19:32,713 | INFO     | mean x: 1773677477.5
[2026-03-16 13:20:22] 2026-03-16 17:19:32,713 | INFO     | mean y: 2986737.8358208956
[2026-03-16 13:20:22] 2026-03-16 17:19:32,713 | INFO     | intersect: -12148008842.513815
[2026-03-16 13:20:22] 2026-03-16 17:19:32,713 | INFO     | chi2: 0.0006905621224517375
[2026-03-16 13:20:22] 2026-03-16 17:19:32,713 | INFO     | current chi2=0.0006905621224517375 (change=79.31421223620785 %)
[2026-03-16 13:20:22] 2026-03-16 17:19:32,714 | INFO     | sum of square deviations: 665612480.0
[2026-03-16 13:20:22] 2026-03-16 17:19:32,714 | INFO     | sum of deviations: 4144214339.999998
[2026-03-16 13:20:22] 2026-03-16 17:19:32,714 | INFO     | mean x: 1773677630.0
[2026-03-16 13:20:22] 2026-03-16 17:19:32,714 | INFO     | mean y: 2988563.7131782947
[2026-03-16 13:20:22] 2026-03-16 17:19:32,714 | INFO     | intersect: -11040224251.02132
[2026-03-16 13:20:22] 2026-03-16 17:19:32,715 | INFO     | chi2: 0.0003665205492909494
[2026-03-16 13:20:22] 2026-03-16 17:19:32,715 | INFO     | current chi2=0.0003665205492909494 (change=46.92431898962645 %)
[2026-03-16 13:20:22] 2026-03-16 17:19:32,715 | INFO     | sum of square deviations: 591173875.0
[2026-03-16 13:20:22] 2026-03-16 17:19:32,716 | INFO     | sum of deviations: 3451050356.0
[2026-03-16 13:20:22] 2026-03-16 17:19:32,716 | INFO     | mean x: 1773677782.5
[2026-03-16 13:20:22] 2026-03-16 17:19:32,716 | INFO     | mean y: 2989982.806451613
[2026-03-16 13:20:22] 2026-03-16 17:19:32,716 | INFO     | intersect: -10351072673.845816
[2026-03-16 13:20:22] 2026-03-16 17:19:32,716 | INFO     | chi2: 0.00027517529623247595
[2026-03-16 13:20:22] 2026-03-16 17:19:32,716 | INFO     | current chi2=0.00027517529623247595 (change=24.922273317331037 %)
[2026-03-16 13:20:22] 2026-03-16 17:19:32,716 | INFO     | left removable region: 50
[2026-03-16 13:20:22] 2026-03-16 17:19:32,717 | INFO     | sum of square deviations: 249388862.0
[2026-03-16 13:20:22] 2026-03-16 17:19:32,717 | INFO     | sum of deviations: 1170498744.0
[2026-03-16 13:20:22] 2026-03-16 17:19:32,717 | INFO     | mean x: 1773678362.0
[2026-03-16 13:20:22] 2026-03-16 17:19:32,717 | INFO     | mean y: 2994763.0
[2026-03-16 13:20:22] 2026-03-16 17:19:32,717 | INFO     | intersect: -8321708587.14792
[2026-03-16 13:20:22] 2026-03-16 17:19:32,718 | INFO     | chi2: 0.0001005935613114233
[2026-03-16 13:20:22] 2026-03-16 17:19:32,718 | INFO     | current memory leak: 4.69 B/s (using 93 data points, chi2=0.00)
[2026-03-16 13:20:22] 2026-03-16 17:19:32,718 | INFO     | could have reported an average CPU frequency of 1762 MHz (9 samples)
[2026-03-16 13:20:22] 2026-03-16 17:19:32,718 | INFO     | ..............................
[2026-03-16 13:20:22] 2026-03-16 17:19:32,718 | INFO     | . Timing measurements:
[2026-03-16 13:20:22] 2026-03-16 17:19:32,718 | INFO     | . get job = 0 s
[2026-03-16 13:20:22] 2026-03-16 17:19:32,719 | INFO     | . initial setup = 7 s
[2026-03-16 13:20:22] 2026-03-16 17:19:32,719 | INFO     | . payload setup = 7 s
[2026-03-16 13:20:22] 2026-03-16 17:19:32,719 | INFO     | . stage-in = 0 s
[2026-03-16 13:20:22] 2026-03-16 17:19:32,719 | INFO     | . payload execution = 9064 s
[2026-03-16 13:20:22] 2026-03-16 17:19:32,719 | INFO     | . stage-out = 0 s
[2026-03-16 13:20:22] 2026-03-16 17:19:32,719 | INFO     | . log creation = 0 s
[2026-03-16 13:20:22] 2026-03-16 17:19:32,719 | INFO     | ..............................
[2026-03-16 13:20:22] 2026-03-16 17:19:32,804 | INFO     | time since job start (9091s) is within the limit (345600.0s)
[2026-03-16 13:20:22] 2026-03-16 17:19:33,100 | INFO     | 
[2026-03-16 13:20:22] 2026-03-16 17:19:33,100 | INFO     | job summary report
[2026-03-16 13:20:22] 2026-03-16 17:19:33,100 | INFO     | --------------------------------------------------
[2026-03-16 13:20:22] 2026-03-16 17:19:33,100 | INFO     | PanDA job id: 7049664074
[2026-03-16 13:20:22] 2026-03-16 17:19:33,100 | INFO     | task id: 48966932
[2026-03-16 13:20:22] 2026-03-16 17:19:33,101 | INFO     | errors: (none)
[2026-03-16 13:20:22] 2026-03-16 17:19:33,101 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-16 13:20:22] 2026-03-16 17:19:33,101 | INFO     | pilot state: finished 
[2026-03-16 13:20:22] 2026-03-16 17:19:33,101 | INFO     | transexitcode: 0
[2026-03-16 13:20:22] 2026-03-16 17:19:33,101 | INFO     | exeerrorcode: 0
[2026-03-16 13:20:22] 2026-03-16 17:19:33,101 | INFO     | exeerrordiag: 
[2026-03-16 13:20:22] 2026-03-16 17:19:33,102 | INFO     | exitcode: 0
[2026-03-16 13:20:22] 2026-03-16 17:19:33,102 | INFO     | exitmsg: OK
[2026-03-16 13:20:22] 2026-03-16 17:19:33,102 | INFO     | cpuconsumptiontime: 98762 s
[2026-03-16 13:20:22] 2026-03-16 17:19:33,102 | INFO     | nevents: 400
[2026-03-16 13:20:22] 2026-03-16 17:19:33,102 | INFO     | neventsw: 0
[2026-03-16 13:20:22] 2026-03-16 17:19:33,102 | INFO     | pid: 4537
[2026-03-16 13:20:22] 2026-03-16 17:19:33,103 | INFO     | pgrp: 4537
[2026-03-16 13:20:22] 2026-03-16 17:19:33,103 | INFO     | corecount: 12
[2026-03-16 13:20:22] 2026-03-16 17:19:33,103 | INFO     | event service: False
[2026-03-16 13:20:22] 2026-03-16 17:19:33,103 | INFO     | sizes: {0: 2280230, 11: 2280230, 9076: 2308474, 9078: 2317472, 9079: 2317528, 9080: 2317786}
[2026-03-16 13:20:22] 2026-03-16 17:19:33,103 | INFO     | --------------------------------------------------
[2026-03-16 13:20:22] 2026-03-16 17:19:33,103 | INFO     | 
[2026-03-16 13:20:22] 2026-03-16 17:19:33,103 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-03-16 13:20:22] 2026-03-16 17:19:33,134 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-16 13:20:22] 2026-03-16 17:19:33,134 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-16 13:20:22] 2026-03-16 17:19:33,135 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-16 13:20:22] 2026-03-16 17:19:33,135 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-16 13:20:22] 2026-03-16 17:19:33,135 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-16 13:20:22] 2026-03-16 17:19:33,135 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-16 13:20:22] 2026-03-16 17:19:33,135 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-16 13:20:22] 2026-03-16 17:19:33,135 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-16 13:20:22] 2026-03-16 17:19:33,135 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-16 13:20:22] 2026-03-16 17:19:33,136 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-16 13:20:22] 2026-03-16 17:19:33,136 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-16 13:20:22] 2026-03-16 17:19:33,136 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-16 13:20:22] 2026-03-16 17:19:33,136 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-16 13:20:22] 2026-03-16 17:19:33,136 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-16 13:20:22] 2026-03-16 17:19:33,137 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-16 13:20:22] 2026-03-16 17:19:33,137 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-16 13:20:22] 2026-03-16 17:19:33,137 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-16 13:20:22] 2026-03-16 17:19:33,137 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-16 13:20:22] 2026-03-16 17:19:33,137 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-16 13:20:22] 2026-03-16 17:19:33,137 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-16 13:20:22] 2026-03-16 17:19:33,138 | INFO     | job 7049664074 has completed (purged errors)
[2026-03-16 13:20:22] 2026-03-16 17:19:33,138 | INFO     | overall cleanup function is called
[2026-03-16 13:20:22] 2026-03-16 17:19:34,146 | INFO     | --- collectZombieJob: --- 10, [4537]
[2026-03-16 13:20:22] 2026-03-16 17:19:34,146 | INFO     | zombie collector waiting for pid 4537
[2026-03-16 13:20:22] 2026-03-16 17:19:34,146 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-16 13:20:22] 2026-03-16 17:19:34,147 | INFO     | collected zombie processes
[2026-03-16 13:20:22] 2026-03-16 17:19:34,147 | INFO     | will attempt to kill all subprocesses of pid=4537
[2026-03-16 13:20:22] 2026-03-16 17:19:34,235 | INFO     | process IDs to be killed: [4537] (in reverse order)
[2026-03-16 13:20:22] 2026-03-16 17:19:34,288 | WARNING  | found no corresponding commands to process id(s)
[2026-03-16 13:20:22] 2026-03-16 17:19:34,288 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-16 13:20:22] 2026-03-16 17:19:34,290 | INFO     | did not find any defunct processes belonging to 4537
[2026-03-16 13:20:22] 2026-03-16 17:19:34,293 | INFO     | did not find any defunct processes belonging to 4537
[2026-03-16 13:20:22] 2026-03-16 17:19:34,293 | INFO     | ready for new job
[2026-03-16 13:20:22] 2026-03-16 17:19:34,293 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-16 13:20:22] 2026-03-16 17:19:34,294 | INFO     | **************************************
[2026-03-16 13:20:22] 2026-03-16 17:19:34,294 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-16 13:20:22] 2026-03-16 17:19:34,294 | INFO     | **************************************
[2026-03-16 13:20:22] 2026-03-16 17:19:34,294 | INFO     | 
[2026-03-16 13:20:22] 2026-03-16 17:19:34,295 | INFO     | architecture information:
[2026-03-16 13:20:22] 2026-03-16 17:19:34,296 | INFO     | executing command: cat /etc/os-release
[2026-03-16 13:20:22] 2026-03-16 17:19:34,311 | INFO     | cat /etc/os-release:
[2026-03-16 13:20:22] NAME="CentOS Linux"
[2026-03-16 13:20:22] VERSION="7 (Core)"
[2026-03-16 13:20:22] ID="centos"
[2026-03-16 13:20:22] ID_LIKE="rhel fedora"
[2026-03-16 13:20:22] VERSION_ID="7"
[2026-03-16 13:20:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-16 13:20:22] ANSI_COLOR="0;31"
[2026-03-16 13:20:22] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-16 13:20:22] HOME_URL="https://www.centos.org/"
[2026-03-16 13:20:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-16 13:20:22] 
[2026-03-16 13:20:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-16 13:20:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-16 13:20:22] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-16 13:20:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-16 13:20:22] 
[2026-03-16 13:20:22] 2026-03-16 17:19:34,311 | INFO     | **************************************
[2026-03-16 13:20:22] 2026-03-16 17:19:34,814 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-03-16 13:20:22] 2026-03-16 17:19:34,830 | INFO     | sufficient remaining disk space (29253173248 B)
[2026-03-16 13:20:22] 2026-03-16 17:19:34,830 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-16 13:20:22] 2026-03-16 17:19:34,831 | INFO     | current server update state: UPDATING_FINAL
[2026-03-16 13:20:22] 2026-03-16 17:19:34,831 | INFO     | update_server=False
[2026-03-16 13:20:22] 2026-03-16 17:19:34,831 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-16 13:20:22] 2026-03-16 17:19:34,831 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-16 13:20:22] 2026-03-16 17:19:34,831 | INFO     | aborting loop
[2026-03-16 13:20:22] 2026-03-16 17:19:34,974 | INFO     | all job control threads have been joined
[2026-03-16 13:20:22] 2026-03-16 17:19:35,582 | INFO     | all data control threads have been joined
[2026-03-16 13:20:22] 2026-03-16 17:19:35,836 | INFO     | [job] retrieve thread has finished
[2026-03-16 13:20:22] 2026-03-16 17:19:35,837 | INFO     | [job] job monitor thread has finished
[2026-03-16 13:20:22] 2026-03-16 17:19:35,980 | INFO     | [job] control thread has finished
[2026-03-16 13:20:22] 2026-03-16 17:19:36,004 | INFO     | [payload] validate_post thread has finished
[2026-03-16 13:20:22] 2026-03-16 17:19:36,018 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-16 13:20:22] 2026-03-16 17:19:36,081 | INFO     | all payload control threads have been joined
[2026-03-16 13:20:22] 2026-03-16 17:19:36,136 | INFO     | [payload] validate_pre thread has finished
[2026-03-16 13:20:22] 2026-03-16 17:19:36,588 | INFO     | [data] control thread has finished
[2026-03-16 13:20:22] 2026-03-16 17:19:36,613 | INFO     | [data] copytool_in thread has finished
[2026-03-16 13:20:22] 2026-03-16 17:19:36,871 | INFO     | [job] validate thread has finished
[2026-03-16 13:20:22] 2026-03-16 17:19:36,977 | INFO     | [payload] execute_payloads thread has finished
[2026-03-16 13:20:22] 2026-03-16 17:19:37,005 | INFO     | [payload] failed_post thread has finished
[2026-03-16 13:20:22] 2026-03-16 17:19:37,086 | INFO     | [payload] control thread has finished
[2026-03-16 13:20:22] 2026-03-16 17:19:37,147 | INFO     | [job] create_data_payload thread has finished
[2026-03-16 13:20:22] 2026-03-16 17:19:37,627 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-16 13:20:22] 2026-03-16 17:19:37,806 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-16 13:20:22] 2026-03-16 17:19:38,023 | INFO     | [data] copytool_out thread has finished
[2026-03-16 13:20:22] 2026-03-16 17:19:38,812 | INFO     | [job] queue monitor thread has finished
[2026-03-16 13:20:22] 2026-03-16 17:19:41,632 | INFO     | [data] queue_monitor thread has finished
[2026-03-16 13:20:22] 2026-03-16 17:19:45,467 | INFO     | job.realtimelogging is not enabled
[2026-03-16 13:20:22] 2026-03-16 17:19:46,473 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-16 13:20:22] 2026-03-16 17:20:06,000 | INFO     | PID=32345 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-16 13:20:22] 2026-03-16 17:20:06,000 | INFO     | found 0 job(s) in 20 queues
[2026-03-16 13:20:22] 2026-03-16 17:20:06,000 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-16 13:20:22] 2026-03-16 17:20:06,001 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-16 13:20:22] 2026-03-16 17:20:15,413 | INFO     | [monitor] cgroup control has ended
[2026-03-16 13:20:22] 2026-03-16 17:20:17,474 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139941054674752)>', '<ExcThread(monitor, started 139940620916480)>']
[2026-03-16 13:20:22] 2026-03-16 17:20:18,048 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-16 13:20:22] 2026-03-16 17:20:18,054 | INFO     | [monitor] control thread has ended
[2026-03-16 13:20:22] 2026-03-16 17:20:22,499 | INFO     | all workflow threads have been joined
[2026-03-16 13:20:22] 2026-03-16 17:20:22,500 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-16 13:20:22] 2026-03-16 17:20:22,500 | INFO     | traces error code: 0
[2026-03-16 13:20:22] 2026-03-16 17:20:22,500 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-16 13:20:22] 2026-03-16 17:20:22,577 [wrapper] ==== pilot stdout END ====
[2026-03-16 13:20:22] 2026-03-16 17:20:22,581 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-16 13:20:22] 2026-03-16 17:20:22,585 [wrapper] pilotpid: 32345
[2026-03-16 13:20:22] 2026-03-16 17:20:22,588 [wrapper] Pilot exit status: 0
[2026-03-16 13:20:22] 2026-03-16 17:20:22,604 [wrapper] pandaids: 7049664074
[2026-03-16 13:20:22] 2026-03-16 17:20:22,647 [wrapper] cleanup supervisor_pilot 14495 32346
[2026-03-16 13:20:22] 2026-03-16 17:20:22,651 [wrapper] Test setup, not cleaning
[2026-03-16 13:20:22] 2026-03-16 17:20:22,654 [wrapper] apfmon messages muted
[2026-03-16 13:20:22] 2026-03-16 17:20:22,658 [wrapper] ==== wrapper stdout END ====
[2026-03-16 13:20:22] 2026-03-16 17:20:22,662 [wrapper] ==== wrapper stderr END ====
[2026-03-16 13:20:22]  *** Error codes and diagnostics ***
[2026-03-16 13:20:22]     "exeErrorCode": 0,
[2026-03-16 13:20:22]     "exeErrorDiag": "",
[2026-03-16 13:20:22]     "pilotErrorCode": 0,
[2026-03-16 13:20:22]     "pilotErrorDiag": "",
[2026-03-16 13:20:22]  *** Listing of results directory ***
[2026-03-16 13:20:22] total 481084
[2026-03-16 13:20:22] -rw-r--r-- 1 boincer umatlas    585013 Mar 11 05:02 pilot3.tar.gz
[2026-03-16 13:20:22] -rw-r--r-- 1 boincer umatlas      5111 Mar 11 05:38 queuedata.json
[2026-03-16 13:20:22] -rwx------ 1 boincer umatlas     36322 Mar 11 05:39 runpilot2-wrapper.sh
[2026-03-16 13:20:22] -rw-r--r-- 1 boincer umatlas       100 Mar 16 10:47 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-16 13:20:22] -rwxr-xr-x 1 boincer umatlas      7986 Mar 16 10:47 run_atlas
[2026-03-16 13:20:22] -rw-r--r-- 1 boincer umatlas       105 Mar 16 10:47 job.xml
[2026-03-16 13:20:22] -rw-r--r-- 2 boincer umatlas 225658111 Mar 16 10:47 EVNT.48966930._000116.pool.root.1
[2026-03-16 13:20:22] -rw-r--r-- 2 boincer umatlas     15845 Mar 16 10:47 start_atlas.sh
[2026-03-16 13:20:22] drwxrwx--x 2 boincer umatlas      4096 Mar 16 10:47 shared
[2026-03-16 13:20:22] -rw-r--r-- 2 boincer umatlas    597534 Mar 16 10:47 input.tar.gz
[2026-03-16 13:20:22] -rw-r--r-- 1 boincer umatlas         0 Mar 16 10:47 boinc_lockfile
[2026-03-16 13:20:22] -rw-r--r-- 1 boincer umatlas      2563 Mar 16 10:47 pandaJob.out
[2026-03-16 13:20:22] -rw------- 1 boincer umatlas        57 Mar 16 10:47 setup.sh.local
[2026-03-16 13:20:22] -rw------- 1 boincer umatlas   1006429 Mar 16 10:47 agis_schedconf.cvmfs.json
[2026-03-16 13:20:22] -rw------- 1 boincer umatlas   1511579 Mar 16 10:47 agis_ddmendpoints.agis.ALL.json
[2026-03-16 13:20:22] -rw------- 1 boincer umatlas       445 Mar 16 10:48 workernode_map.json
[2026-03-16 13:20:22] drwx------ 5 boincer umatlas      4096 Mar 16 10:48 pilot3
[2026-03-16 13:20:22] -rw-r--r-- 1 boincer umatlas      5953 Mar 16 13:10 init_data.xml
[2026-03-16 13:20:22] -rw------- 1 boincer umatlas 259589999 Mar 16 13:18 HITS.48966932._002942.pool.root.1
[2026-03-16 13:20:22] -rw-r--r-- 1 boincer umatlas       529 Mar 16 13:19 boinc_task_state.xml
[2026-03-16 13:20:22] -rw------- 1 boincer umatlas      1054 Mar 16 13:19 memory_monitor_summary.json
[2026-03-16 13:20:22] -rw------- 1 boincer umatlas    440647 Mar 16 13:19 log.48966932._002942.job.log.tgz.1
[2026-03-16 13:20:22] -rw------- 1 boincer umatlas      6418 Mar 16 13:19 heartbeat.json
[2026-03-16 13:20:22] -rw------- 1 boincer umatlas        95 Mar 16 13:20 pilot_heartbeat.json
[2026-03-16 13:20:22] -rw-r--r-- 1 boincer umatlas        27 Mar 16 13:20 wrapper_checkpoint.txt
[2026-03-16 13:20:22] -rw-r--r-- 1 boincer umatlas      8192 Mar 16 13:20 boinc_mmap_file
[2026-03-16 13:20:22] -rw------- 1 boincer umatlas      4814 Mar 16 13:20 pilotlog.txt
[2026-03-16 13:20:22] -rw------- 1 boincer umatlas   1281376 Mar 16 13:20 log.48966932._002942.job.log.1
[2026-03-16 13:20:22] -rw------- 1 boincer umatlas       357 Mar 16 13:20 output.list
[2026-03-16 13:20:22] -rw-r--r-- 1 boincer umatlas       620 Mar 16 13:20 runtime_log
[2026-03-16 13:20:22] -rw------- 1 boincer umatlas   1740800 Mar 16 13:20 result.tar.gz
[2026-03-16 13:20:22] -rw-r--r-- 1 boincer umatlas      9343 Mar 16 13:20 runtime_log.err
[2026-03-16 13:20:22] -rw------- 1 boincer umatlas       660 Mar 16 13:20 ROYKDm1CVK9n9Rq4apOajLDm4fhM0noT9bVooX4SDmGLgLDmfXlDQn.diag
[2026-03-16 13:20:22] -rw-r--r-- 1 boincer umatlas     20881 Mar 16 13:20 stderr.txt
[2026-03-16 13:20:22] HITS file was successfully produced:
[2026-03-16 13:20:22] -rw------- 1 boincer umatlas 259589999 Mar 16 13:18 shared/HITS.pool.root.1
[2026-03-16 13:20:22]  *** Contents of shared directory: ***
[2026-03-16 13:20:22] total 476184
[2026-03-16 13:20:22] -rw-r--r-- 2 boincer umatlas 225658111 Mar 16 10:47 ATLAS.root_0
[2026-03-16 13:20:22] -rw-r--r-- 2 boincer umatlas     15845 Mar 16 10:47 start_atlas.sh
[2026-03-16 13:20:22] -rw-r--r-- 2 boincer umatlas    597534 Mar 16 10:47 input.tar.gz
[2026-03-16 13:20:22] -rw------- 1 boincer umatlas 259589999 Mar 16 13:18 HITS.pool.root.1
[2026-03-16 13:20:22] -rw------- 1 boincer umatlas   1740800 Mar 16 13:20 result.tar.gz
13:20:24 (28516): run_atlas exited; CPU time 98737.336848
13:20:24 (28516): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN