Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
01:25:39 (4507): wrapper (7.7.26015): starting
01:25:39 (4507): wrapper: running run_atlas (--nthreads 12)
[2026-03-16 01:25:39] Arguments: --nthreads 12
[2026-03-16 01:25:39] Threads: 12
[2026-03-16 01:25:39] Checking for CVMFS
[2026-03-16 01:25:39] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-16 01:25:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-16 01:25:39] Running cvmfs_config stat atlas.cern.ch
[2026-03-16 01:25:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-16 01:25:39] 2.11.2.0 2981 445613 93640 157342 0 73 11532236 20275200 1 130560 1 193975633 99.955 25509744 17344 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-16 01:25:39] CVMFS is ok
[2026-03-16 01:25:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-16 01:25:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-16 01:25:39] Further information can be found at the LHC@home message board.
[2026-03-16 01:25:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-16 01:25:39] Checking for apptainer binary...
[2026-03-16 01:25:39] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-16 01:25:39] Running /usr/bin/apptainer --version
[2026-03-16 01:25:39] apptainer version 1.3.2-1.el7
[2026-03-16 01:25:39] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-16 01:25:41] c-205-30.aglt2.org
[2026-03-16 01:25:41] apptainer works
[2026-03-16 01:25:41] Set ATHENA_PROC_NUMBER=12
[2026-03-16 01:25:41] Set ATHENA_CORE_NUMBER=12
[2026-03-16 01:25:41] Starting ATLAS job with PandaID=7044541065
[2026-03-16 01:25:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-16 02:47:13]  *** The last 200 lines of the pilot log: ***
[2026-03-16 02:47:13]  direct_access_wan=False
[2026-03-16 02:47:13]  domain=
[2026-03-16 02:47:13]  filesize=389963
[2026-03-16 02:47:13]  filetype=log
[2026-03-16 02:47:13]  guid=e0ac5f33-829b-4256-b51d-067038deb34a
[2026-03-16 02:47:13]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-16 02:47:13]  is_altstaged=None
[2026-03-16 02:47:13]  is_tar=False
[2026-03-16 02:47:13]  lfn=log.48967030._002308.job.log.tgz.1
[2026-03-16 02:47:13]  mtime=0
[2026-03-16 02:47:13]  protocol_id=None
[2026-03-16 02:47:13]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-16 02:47:13]  replicas=None
[2026-03-16 02:47:13]  scope=mc23_13p6TeV
[2026-03-16 02:47:13]  status=None
[2026-03-16 02:47:13]  status_code=0
[2026-03-16 02:47:13]  storage_token=
[2026-03-16 02:47:13]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-7044541065/log.48967030._002308.job.log.tgz.1
[2026-03-16 02:47:13]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/6b/25/log.48967030._002308.job.log.tgz.1
[2026-03-16 02:47:13]  workdir=None
[2026-03-16 02:47:13] ]
[2026-03-16 02:47:13] 2026-03-16 06:46:06,825 | INFO     | transferring file log.48967030._002308.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-7044541065/log.48967030._002308.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-03-16 02:47:13] 2026-03-16 06:46:06,825 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-7044541065/log.48967030._002308.job.log.tgz.1 /tmp/boinchome/slots/0/log.48967030._002308.job
[2026-03-16 02:47:13] 2026-03-16 06:46:06,838 | INFO     | number of running child processes to parent process 12632: 1
[2026-03-16 02:47:13] 2026-03-16 06:46:06,839 | INFO     | maximum number of monitored processes: 6
[2026-03-16 02:47:13] 2026-03-16 06:46:06,936 | INFO     | adding to output.list: log.48967030._002308.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/6b/25/log.48967030._002308.job.log.tg
[2026-03-16 02:47:13] 2026-03-16 06:46:06,937 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-16 02:47:13] 2026-03-16 06:46:06,937 | INFO     | summary of transferred files:
[2026-03-16 02:47:13] 2026-03-16 06:46:06,937 | INFO     |  -- lfn=log.48967030._002308.job.log.tgz.1, status_code=0, status=transferred
[2026-03-16 02:47:13] 2026-03-16 06:46:06,938 | INFO     | stage-out finished correctly
[2026-03-16 02:47:13] 2026-03-16 06:46:07,019 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-16 02:47:13] 2026-03-16 06:46:08,447 | INFO     | time since job start (4807s) is within the limit (349056.0s)
[2026-03-16 02:47:13] 2026-03-16 06:46:08,604 | INFO     | job 7044541065 has state=finished
[2026-03-16 02:47:13] 2026-03-16 06:46:08,604 | INFO     | preparing for final server update for job 7044541065 in state='finished'
[2026-03-16 02:47:13] 2026-03-16 06:46:08,604 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-7044541065/jobReport.json
[2026-03-16 02:47:13] 2026-03-16 06:46:08,607 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-03-16 02:47:13] 2026-03-16 06:46:08,608 | INFO     | this job has now completed (state=finished)
[2026-03-16 02:47:13] 2026-03-16 06:46:08,608 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-16 02:47:13] 2026-03-16 06:46:08,608 | INFO     | log transfer has been attempted: DONE
[2026-03-16 02:47:13] 2026-03-16 06:46:08,608 | INFO     | job 7044541065 has finished - writing final server update
[2026-03-16 02:47:13] 2026-03-16 06:46:08,609 | INFO     | total number of processed events: 400 (read)
[2026-03-16 02:47:13] 2026-03-16 06:46:08,611 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7044541065/memory_monitor_summary.json (trf name=prmon)
[2026-03-16 02:47:13] 2026-03-16 06:46:08,611 | INFO     | extracted standard info from prmon json
[2026-03-16 02:47:13] 2026-03-16 06:46:08,611 | INFO     | extracted standard memory fields from prmon json
[2026-03-16 02:47:13] 2026-03-16 06:46:08,612 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-16 02:47:13] 2026-03-16 06:46:08,612 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-16 02:47:13] 2026-03-16 06:46:08,612 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-16 02:47:13] 2026-03-16 06:46:08,613 | INFO     | fitting pss+swap vs Time
[2026-03-16 02:47:13] 2026-03-16 06:46:08,614 | INFO     | sum of square deviations: 115715658.0
[2026-03-16 02:47:13] 2026-03-16 06:46:08,614 | INFO     | sum of deviations: -9613841376.999998
[2026-03-16 02:47:13] 2026-03-16 06:46:08,614 | INFO     | mean x: 1773641255.5
[2026-03-16 02:47:13] 2026-03-16 06:46:08,614 | INFO     | mean y: 2834326.638888889
[2026-03-16 02:47:13] 2026-03-16 06:46:08,614 | INFO     | intersect: 147359777931.28162
[2026-03-16 02:47:13] 2026-03-16 06:46:08,614 | INFO     | chi2: 0.060063483762884555
[2026-03-16 02:47:13] 2026-03-16 06:46:08,615 | INFO     | current memory leak: -83.08 B/s (using 72 data points, chi2=0.06)
[2026-03-16 02:47:13] 2026-03-16 06:46:08,615 | INFO     | could have reported an average CPU frequency of 1684 MHz (6 samples)
[2026-03-16 02:47:13] 2026-03-16 06:46:08,615 | INFO     | ..............................
[2026-03-16 02:47:13] 2026-03-16 06:46:08,615 | INFO     | . Timing measurements:
[2026-03-16 02:47:13] 2026-03-16 06:46:08,615 | INFO     | . get job = 0 s
[2026-03-16 02:47:13] 2026-03-16 06:46:08,615 | INFO     | . initial setup = 7 s
[2026-03-16 02:47:13] 2026-03-16 06:46:08,615 | INFO     | . payload setup = 7 s
[2026-03-16 02:47:13] 2026-03-16 06:46:08,615 | INFO     | . stage-in = 0 s
[2026-03-16 02:47:13] 2026-03-16 06:46:08,616 | INFO     | . payload execution = 4783 s
[2026-03-16 02:47:13] 2026-03-16 06:46:08,616 | INFO     | . stage-out = 0 s
[2026-03-16 02:47:13] 2026-03-16 06:46:08,616 | INFO     | . log creation = 0 s
[2026-03-16 02:47:13] 2026-03-16 06:46:08,616 | INFO     | ..............................
[2026-03-16 02:47:13] 2026-03-16 06:46:08,883 | INFO     | 
[2026-03-16 02:47:13] 2026-03-16 06:46:08,884 | INFO     | job summary report
[2026-03-16 02:47:13] 2026-03-16 06:46:08,884 | INFO     | --------------------------------------------------
[2026-03-16 02:47:13] 2026-03-16 06:46:08,884 | INFO     | PanDA job id: 7044541065
[2026-03-16 02:47:13] 2026-03-16 06:46:08,884 | INFO     | task id: 48967030
[2026-03-16 02:47:13] 2026-03-16 06:46:08,884 | INFO     | errors: (none)
[2026-03-16 02:47:13] 2026-03-16 06:46:08,885 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-16 02:47:13] 2026-03-16 06:46:08,885 | INFO     | pilot state: finished 
[2026-03-16 02:47:13] 2026-03-16 06:46:08,885 | INFO     | transexitcode: 0
[2026-03-16 02:47:13] 2026-03-16 06:46:08,885 | INFO     | exeerrorcode: 0
[2026-03-16 02:47:13] 2026-03-16 06:46:08,885 | INFO     | exeerrordiag: 
[2026-03-16 02:47:13] 2026-03-16 06:46:08,885 | INFO     | exitcode: 0
[2026-03-16 02:47:13] 2026-03-16 06:46:08,885 | INFO     | exitmsg: OK
[2026-03-16 02:47:13] 2026-03-16 06:46:08,886 | INFO     | cpuconsumptiontime: 53179 s
[2026-03-16 02:47:13] 2026-03-16 06:46:08,886 | INFO     | nevents: 400
[2026-03-16 02:47:13] 2026-03-16 06:46:08,886 | INFO     | neventsw: 0
[2026-03-16 02:47:13] 2026-03-16 06:46:08,886 | INFO     | pid: 12632
[2026-03-16 02:47:13] 2026-03-16 06:46:08,886 | INFO     | pgrp: 12632
[2026-03-16 02:47:13] 2026-03-16 06:46:08,886 | INFO     | corecount: 12
[2026-03-16 02:47:13] 2026-03-16 06:46:08,887 | INFO     | event service: False
[2026-03-16 02:47:13] 2026-03-16 06:46:08,887 | INFO     | sizes: {0: 2279809, 1: 2280270, 12: 2280270, 4793: 2306469, 4794: 2315523, 4796: 2315661}
[2026-03-16 02:47:13] 2026-03-16 06:46:08,887 | INFO     | --------------------------------------------------
[2026-03-16 02:47:13] 2026-03-16 06:46:08,887 | INFO     | 
[2026-03-16 02:47:13] 2026-03-16 06:46:08,887 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-03-16 02:47:13] 2026-03-16 06:46:08,913 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-16 02:47:13] 2026-03-16 06:46:08,914 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-16 02:47:13] 2026-03-16 06:46:08,914 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-16 02:47:13] 2026-03-16 06:46:08,914 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-16 02:47:13] 2026-03-16 06:46:08,914 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-16 02:47:13] 2026-03-16 06:46:08,914 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-16 02:47:13] 2026-03-16 06:46:08,914 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-16 02:47:13] 2026-03-16 06:46:08,915 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-16 02:47:13] 2026-03-16 06:46:08,915 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-16 02:47:13] 2026-03-16 06:46:08,915 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-16 02:47:13] 2026-03-16 06:46:08,915 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-16 02:47:13] 2026-03-16 06:46:08,915 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-16 02:47:13] 2026-03-16 06:46:08,915 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-16 02:47:13] 2026-03-16 06:46:08,916 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-16 02:47:13] 2026-03-16 06:46:08,916 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-16 02:47:13] 2026-03-16 06:46:08,916 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-16 02:47:13] 2026-03-16 06:46:08,916 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-16 02:47:13] 2026-03-16 06:46:08,916 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-16 02:47:13] 2026-03-16 06:46:08,916 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-16 02:47:13] 2026-03-16 06:46:08,917 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-16 02:47:13] 2026-03-16 06:46:08,917 | INFO     | job 7044541065 has completed (purged errors)
[2026-03-16 02:47:13] 2026-03-16 06:46:08,917 | INFO     | overall cleanup function is called
[2026-03-16 02:47:13] 2026-03-16 06:46:09,925 | INFO     | --- collectZombieJob: --- 10, [12632]
[2026-03-16 02:47:13] 2026-03-16 06:46:09,925 | INFO     | zombie collector waiting for pid 12632
[2026-03-16 02:47:13] 2026-03-16 06:46:09,926 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-16 02:47:13] 2026-03-16 06:46:09,926 | INFO     | collected zombie processes
[2026-03-16 02:47:13] 2026-03-16 06:46:09,926 | INFO     | will attempt to kill all subprocesses of pid=12632
[2026-03-16 02:47:13] 2026-03-16 06:46:10,014 | INFO     | process IDs to be killed: [12632] (in reverse order)
[2026-03-16 02:47:13] 2026-03-16 06:46:10,068 | WARNING  | found no corresponding commands to process id(s)
[2026-03-16 02:47:13] 2026-03-16 06:46:10,069 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-16 02:47:13] 2026-03-16 06:46:10,071 | INFO     | did not find any defunct processes belonging to 12632
[2026-03-16 02:47:13] 2026-03-16 06:46:10,073 | INFO     | did not find any defunct processes belonging to 12632
[2026-03-16 02:47:13] 2026-03-16 06:46:10,074 | INFO     | ready for new job
[2026-03-16 02:47:13] 2026-03-16 06:46:10,074 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-16 02:47:13] 2026-03-16 06:46:10,075 | INFO     | **************************************
[2026-03-16 02:47:13] 2026-03-16 06:46:10,075 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-16 02:47:13] 2026-03-16 06:46:10,075 | INFO     | **************************************
[2026-03-16 02:47:13] 2026-03-16 06:46:10,075 | INFO     | 
[2026-03-16 02:47:13] 2026-03-16 06:46:10,076 | INFO     | architecture information:
[2026-03-16 02:47:13] 2026-03-16 06:46:10,076 | INFO     | executing command: cat /etc/os-release
[2026-03-16 02:47:13] 2026-03-16 06:46:10,091 | INFO     | cat /etc/os-release:
[2026-03-16 02:47:13] NAME="CentOS Linux"
[2026-03-16 02:47:13] VERSION="7 (Core)"
[2026-03-16 02:47:13] ID="centos"
[2026-03-16 02:47:13] ID_LIKE="rhel fedora"
[2026-03-16 02:47:13] VERSION_ID="7"
[2026-03-16 02:47:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-16 02:47:13] ANSI_COLOR="0;31"
[2026-03-16 02:47:13] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-16 02:47:13] HOME_URL="https://www.centos.org/"
[2026-03-16 02:47:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-16 02:47:13] 
[2026-03-16 02:47:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-16 02:47:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-16 02:47:13] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-16 02:47:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-16 02:47:13] 
[2026-03-16 02:47:13] 2026-03-16 06:46:10,091 | INFO     | **************************************
[2026-03-16 02:47:13] 2026-03-16 06:46:10,594 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-03-16 02:47:13] 2026-03-16 06:46:10,611 | INFO     | sufficient remaining disk space (29345447936 B)
[2026-03-16 02:47:13] 2026-03-16 06:46:10,612 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-16 02:47:13] 2026-03-16 06:46:10,612 | INFO     | current server update state: UPDATING_FINAL
[2026-03-16 02:47:13] 2026-03-16 06:46:10,612 | INFO     | update_server=False
[2026-03-16 02:47:13] 2026-03-16 06:46:10,612 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-16 02:47:13] 2026-03-16 06:46:10,613 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-16 02:47:13] 2026-03-16 06:46:10,613 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-16 02:47:13] 2026-03-16 06:46:10,613 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-16 02:47:13] 2026-03-16 06:46:10,613 | INFO     | aborting loop
[2026-03-16 02:47:13] 2026-03-16 06:46:10,907 | INFO     | all data control threads have been joined
[2026-03-16 02:47:13] 2026-03-16 06:46:11,154 | INFO     | all payload control threads have been joined
[2026-03-16 02:47:13] 2026-03-16 06:46:11,411 | INFO     | all job control threads have been joined
[2026-03-16 02:47:13] 2026-03-16 06:46:11,617 | INFO     | [job] retrieve thread has finished
[2026-03-16 02:47:13] 2026-03-16 06:46:11,619 | INFO     | [job] queue monitor thread has finished
[2026-03-16 02:47:13] 2026-03-16 06:46:11,619 | INFO     | [job] job monitor thread has finished
[2026-03-16 02:47:13] 2026-03-16 06:46:11,665 | INFO     | [payload] validate_pre thread has finished
[2026-03-16 02:47:13] 2026-03-16 06:46:11,829 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-16 02:47:13] 2026-03-16 06:46:11,868 | INFO     | [payload] validate_post thread has finished
[2026-03-16 02:47:13] 2026-03-16 06:46:11,912 | INFO     | [data] control thread has finished
[2026-03-16 02:47:13] 2026-03-16 06:46:12,063 | INFO     | [data] copytool_in thread has finished
[2026-03-16 02:47:13] 2026-03-16 06:46:12,155 | INFO     | [payload] control thread has finished
[2026-03-16 02:47:13] 2026-03-16 06:46:12,417 | INFO     | [job] control thread has finished
[2026-03-16 02:47:13] 2026-03-16 06:46:12,619 | INFO     | [data] copytool_out thread has finished
[2026-03-16 02:47:13] 2026-03-16 06:46:12,633 | INFO     | [payload] failed_post thread has finished
[2026-03-16 02:47:13] 2026-03-16 06:46:12,991 | INFO     | [payload] execute_payloads thread has finished
[2026-03-16 02:47:13] 2026-03-16 06:46:13,043 | INFO     | [job] validate thread has finished
[2026-03-16 02:47:13] 2026-03-16 06:46:13,045 | INFO     | [job] create_data_payload thread has finished
[2026-03-16 02:47:13] 2026-03-16 06:46:13,106 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-16 02:47:13] 2026-03-16 06:46:17,111 | INFO     | [data] queue_monitor thread has finished
[2026-03-16 02:47:13] 2026-03-16 06:46:41,643 | INFO     | PID=8197 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-03-16 02:47:13] 2026-03-16 06:46:41,643 | INFO     | found 0 job(s) in 20 queues
[2026-03-16 02:47:13] 2026-03-16 06:46:41,643 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-16 02:47:13] 2026-03-16 06:46:41,643 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-16 02:47:13] 2026-03-16 06:47:08,264 | INFO     | [monitor] cgroup control has ended
[2026-03-16 02:47:13] 2026-03-16 06:47:08,516 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139699627341632)>', '<ExcThread(monitor, started 139698366310144)>']
[2026-03-16 02:47:13] 2026-03-16 06:47:08,762 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-16 02:47:13] 2026-03-16 06:47:08,762 | INFO     | [monitor] control thread has ended
[2026-03-16 02:47:13] 2026-03-16 06:47:13,525 | INFO     | all workflow threads have been joined
[2026-03-16 02:47:13] 2026-03-16 06:47:13,525 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-16 02:47:13] 2026-03-16 06:47:13,525 | INFO     | traces error code: 0
[2026-03-16 02:47:13] 2026-03-16 06:47:13,526 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-16 02:47:13] 2026-03-16 06:47:13,613 [wrapper] ==== pilot stdout END ====
[2026-03-16 02:47:13] 2026-03-16 06:47:13,617 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-16 02:47:13] 2026-03-16 06:47:13,621 [wrapper] pilotpid: 8197
[2026-03-16 02:47:13] 2026-03-16 06:47:13,625 [wrapper] Pilot exit status: 0
[2026-03-16 02:47:13] 2026-03-16 06:47:13,641 [wrapper] pandaids: 7044541065
[2026-03-16 02:47:13] 2026-03-16 06:47:13,683 [wrapper] cleanup supervisor_pilot  2477 8198
[2026-03-16 02:47:13] 2026-03-16 06:47:13,688 [wrapper] Test setup, not cleaning
[2026-03-16 02:47:13] 2026-03-16 06:47:13,691 [wrapper] apfmon messages muted
[2026-03-16 02:47:13] 2026-03-16 06:47:13,695 [wrapper] ==== wrapper stdout END ====
[2026-03-16 02:47:13] 2026-03-16 06:47:13,699 [wrapper] ==== wrapper stderr END ====
[2026-03-16 02:47:13]  *** Error codes and diagnostics ***
[2026-03-16 02:47:13]     "exeErrorCode": 0,
[2026-03-16 02:47:13]     "exeErrorDiag": "",
[2026-03-16 02:47:13]     "pilotErrorCode": 0,
[2026-03-16 02:47:13]     "pilotErrorDiag": "",
[2026-03-16 02:47:13]  *** Listing of results directory ***
[2026-03-16 02:47:13] total 404228
[2026-03-16 02:47:13] -rw-r--r-- 1 boincer umatlas    584627 Mar  6 23:28 pilot3.tar.gz
[2026-03-16 02:47:13] -rw-r--r-- 1 boincer umatlas      5111 Mar  6 23:31 queuedata.json
[2026-03-16 02:47:13] -rwx------ 1 boincer umatlas     36322 Mar  6 23:31 runpilot2-wrapper.sh
[2026-03-16 02:47:13] -rw-r--r-- 1 boincer umatlas       100 Mar 16 01:25 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-16 02:47:13] -rwxr-xr-x 1 boincer umatlas      7986 Mar 16 01:25 run_atlas
[2026-03-16 02:47:13] -rw-r--r-- 1 boincer umatlas       105 Mar 16 01:25 job.xml
[2026-03-16 02:47:13] -rw-r--r-- 2 boincer umatlas 212598158 Mar 16 01:25 EVNT.48967027._000093.pool.root.1
[2026-03-16 02:47:13] -rw-r--r-- 2 boincer umatlas    597946 Mar 16 01:25 input.tar.gz
[2026-03-16 02:47:13] -rw-r--r-- 2 boincer umatlas     15845 Mar 16 01:25 start_atlas.sh
[2026-03-16 02:47:13] drwxrwx--x 2 boincer umatlas      4096 Mar 16 01:25 shared
[2026-03-16 02:47:13] -rw-r--r-- 1 boincer umatlas         0 Mar 16 01:25 boinc_lockfile
[2026-03-16 02:47:13] -rw-r--r-- 1 boincer umatlas      2566 Mar 16 01:25 pandaJob.out
[2026-03-16 02:47:13] -rw------- 1 boincer umatlas        57 Mar 16 01:25 setup.sh.local
[2026-03-16 02:47:13] -rw------- 1 boincer umatlas   1006471 Mar 16 01:25 agis_schedconf.cvmfs.json
[2026-03-16 02:47:13] -rw------- 1 boincer umatlas   1511579 Mar 16 01:25 agis_ddmendpoints.agis.ALL.json
[2026-03-16 02:47:13] -rw------- 1 boincer umatlas       434 Mar 16 01:25 workernode_map.json
[2026-03-16 02:47:13] drwx------ 5 boincer umatlas      4096 Mar 16 01:26 pilot3
[2026-03-16 02:47:13] -rw------- 1 boincer umatlas 195219805 Mar 16 02:45 HITS.48967030._002308.pool.root.1
[2026-03-16 02:47:13] -rw-r--r-- 1 boincer umatlas       529 Mar 16 02:45 boinc_task_state.xml
[2026-03-16 02:47:13] -rw------- 1 boincer umatlas        95 Mar 16 02:46 pilot_heartbeat.json
[2026-03-16 02:47:13] -rw------- 1 boincer umatlas      1053 Mar 16 02:46 memory_monitor_summary.json
[2026-03-16 02:47:13] -rw------- 1 boincer umatlas    389963 Mar 16 02:46 log.48967030._002308.job.log.tgz.1
[2026-03-16 02:47:13] -rw------- 1 boincer umatlas      6416 Mar 16 02:46 heartbeat.json
[2026-03-16 02:47:13] -rw-r--r-- 1 boincer umatlas      5953 Mar 16 02:46 init_data.xml
[2026-03-16 02:47:13] -rw-r--r-- 1 boincer umatlas      8192 Mar 16 02:46 boinc_mmap_file
[2026-03-16 02:47:13] -rw-r--r-- 1 boincer umatlas        27 Mar 16 02:46 wrapper_checkpoint.txt
[2026-03-16 02:47:13] -rw------- 1 boincer umatlas      4741 Mar 16 02:47 pilotlog.txt
[2026-03-16 02:47:13] -rw------- 1 boincer umatlas    695847 Mar 16 02:47 log.48967030._002308.job.log.1
[2026-03-16 02:47:13] -rw------- 1 boincer umatlas       357 Mar 16 02:47 output.list
[2026-03-16 02:47:13] -rw-r--r-- 1 boincer umatlas       620 Mar 16 02:47 runtime_log
[2026-03-16 02:47:13] -rw------- 1 boincer umatlas   1105920 Mar 16 02:47 result.tar.gz
[2026-03-16 02:47:13] -rw-r--r-- 1 boincer umatlas      9343 Mar 16 02:47 runtime_log.err
[2026-03-16 02:47:13] -rw------- 1 boincer umatlas       659 Mar 16 02:47 KsWKDmiVyI9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmIjULDmLXk3kn.diag
[2026-03-16 02:47:13] -rw-r--r-- 1 boincer umatlas     21008 Mar 16 02:47 stderr.txt
[2026-03-16 02:47:13] HITS file was successfully produced:
[2026-03-16 02:47:13] -rw------- 1 boincer umatlas 195219805 Mar 16 02:45 shared/HITS.pool.root.1
[2026-03-16 02:47:13]  *** Contents of shared directory: ***
[2026-03-16 02:47:13] total 399948
[2026-03-16 02:47:13] -rw-r--r-- 2 boincer umatlas 212598158 Mar 16 01:25 ATLAS.root_0
[2026-03-16 02:47:13] -rw-r--r-- 2 boincer umatlas    597946 Mar 16 01:25 input.tar.gz
[2026-03-16 02:47:13] -rw-r--r-- 2 boincer umatlas     15845 Mar 16 01:25 start_atlas.sh
[2026-03-16 02:47:13] -rw------- 1 boincer umatlas 195219805 Mar 16 02:45 HITS.pool.root.1
[2026-03-16 02:47:13] -rw------- 1 boincer umatlas   1105920 Mar 16 02:47 result.tar.gz
02:47:15 (4507): run_atlas exited; CPU time 53162.922141
02:47:15 (4507): called boinc_finish(0)

</stderr_txt>
]]>

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