Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
17:02:31 (12682): wrapper (7.7.26015): starting
17:02:31 (12682): wrapper: running run_atlas (--nthreads 8)
[2026-03-15 17:02:31] Arguments: --nthreads 8
[2026-03-15 17:02:31] Threads: 8
[2026-03-15 17:02:31] Checking for CVMFS
[2026-03-15 17:02:31] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-15 17:02:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-15 17:02:31] Running cvmfs_config stat atlas.cern.ch
[2026-03-15 17:02:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-15 17:02:31] 2.11.2.0 27562 491542 314872 157327 2 50 12138019 18432001 1889 130560 7 805348801 99.419 1133337528 25906 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2026-03-15 17:02:31] CVMFS is ok
[2026-03-15 17:02:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-15 17:02:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-15 17:02:31] Further information can be found at the LHC@home message board.
[2026-03-15 17:02:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-15 17:02:31] Checking for apptainer binary...
[2026-03-15 17:02:31] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-15 17:02:31] Running /usr/bin/apptainer --version
[2026-03-15 17:02:31] apptainer version 1.3.2-1.el7
[2026-03-15 17:02:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-15 17:02:32] c-9-30.aglt2.org
[2026-03-15 17:02:32] apptainer works
[2026-03-15 17:02:32] Set ATHENA_PROC_NUMBER=8
[2026-03-15 17:02:32] Set ATHENA_CORE_NUMBER=8
[2026-03-15 17:02:32] Starting ATLAS job with PandaID=7050441149
[2026-03-15 17:02:32] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-15 20:30:12]  *** The last 200 lines of the pilot log: ***
[2026-03-15 20:30:12] 2026-03-16 00:29:22,650 | INFO     | mean y: 2485306.02955665
[2026-03-15 20:30:12] 2026-03-16 00:29:22,651 | INFO     | intersect: -11985699995.415537
[2026-03-15 20:30:12] 2026-03-16 00:29:22,651 | INFO     | chi2: 1.2277293530885922
[2026-03-15 20:30:12] 2026-03-16 00:29:22,652 | INFO     | sum of square deviations: 2406926989.5
[2026-03-15 20:30:12] 2026-03-16 00:29:22,653 | INFO     | sum of deviations: 17102879818.999998
[2026-03-15 20:30:12] 2026-03-16 00:29:22,653 | INFO     | mean x: 1773614594.5
[2026-03-15 20:30:12] 2026-03-16 00:29:22,653 | INFO     | mean y: 2484955.373737374
[2026-03-15 20:30:12] 2026-03-16 00:29:22,654 | INFO     | intersect: -12600272580.391521
[2026-03-15 20:30:12] 2026-03-16 00:29:22,654 | INFO     | chi2: 1.2284296128969907
[2026-03-15 20:30:12] 2026-03-16 00:29:22,654 | INFO     | current chi2=1.2284296128969907 (change=-0.05703698511702565 %)
[2026-03-15 20:30:12] 2026-03-16 00:29:22,654 | INFO     | right removable region: 197
[2026-03-15 20:30:12] 2026-03-16 00:29:22,655 | INFO     | sum of square deviations: 2406926989.5
[2026-03-15 20:30:12] 2026-03-16 00:29:22,656 | INFO     | sum of deviations: -6291965017.5
[2026-03-15 20:30:12] 2026-03-16 00:29:22,656 | INFO     | mean x: 1773614899.5
[2026-03-15 20:30:12] 2026-03-16 00:29:22,657 | INFO     | mean y: 2504462.277777778
[2026-03-15 20:30:12] 2026-03-16 00:29:22,657 | INFO     | intersect: 4638923826.41021
[2026-03-15 20:30:12] 2026-03-16 00:29:22,657 | INFO     | chi2: 0.06096753187324306
[2026-03-15 20:30:12] 2026-03-16 00:29:22,657 | INFO     | current chi2=0.06096753187324306 (change=95.03412281217621 %)
[2026-03-15 20:30:12] 2026-03-16 00:29:22,658 | INFO     | sum of square deviations: 2229146912.0
[2026-03-15 20:30:12] 2026-03-16 00:29:22,659 | INFO     | sum of deviations: -3491938107.0
[2026-03-15 20:30:12] 2026-03-16 00:29:22,659 | INFO     | mean x: 1773615052.0
[2026-03-15 20:30:12] 2026-03-16 00:29:22,660 | INFO     | mean y: 2502011.932642487
[2026-03-15 20:30:12] 2026-03-16 00:29:22,660 | INFO     | intersect: 2780853655.732953
[2026-03-15 20:30:12] 2026-03-16 00:29:22,660 | INFO     | chi2: 0.03928146878823612
[2026-03-15 20:30:12] 2026-03-16 00:29:22,660 | INFO     | current chi2=0.03928146878823612 (change=35.569855657096625 %)
[2026-03-15 20:30:12] 2026-03-16 00:29:22,661 | INFO     | sum of square deviations: 2060343747.0
[2026-03-15 20:30:12] 2026-03-16 00:29:22,662 | INFO     | sum of deviations: 2043263899.4999998
[2026-03-15 20:30:12] 2026-03-16 00:29:22,662 | INFO     | mean x: 1773615204.5
[2026-03-15 20:30:12] 2026-03-16 00:29:22,663 | INFO     | mean y: 2497040.739361702
[2026-03-15 20:30:12] 2026-03-16 00:29:22,663 | INFO     | intersect: -1756415239.9108434
[2026-03-15 20:30:12] 2026-03-16 00:29:22,663 | INFO     | chi2: 0.0005412965281132639
[2026-03-15 20:30:12] 2026-03-16 00:29:22,663 | INFO     | current chi2=0.0005412965281132639 (change=98.62200537604295 %)
[2026-03-15 20:30:12] 2026-03-16 00:29:22,664 | INFO     | sum of square deviations: 1900284932.0
[2026-03-15 20:30:12] 2026-03-16 00:29:22,665 | INFO     | sum of deviations: 1297536733.9999998
[2026-03-15 20:30:12] 2026-03-16 00:29:22,665 | INFO     | mean x: 1773615357.0
[2026-03-15 20:30:12] 2026-03-16 00:29:22,665 | INFO     | mean y: 2497748.606557377
[2026-03-15 20:30:12] 2026-03-16 00:29:22,666 | INFO     | intersect: -1208547520.9425375
[2026-03-15 20:30:12] 2026-03-16 00:29:22,666 | INFO     | chi2: 0.00012187479450354297
[2026-03-15 20:30:12] 2026-03-16 00:29:22,666 | INFO     | current chi2=0.00012187479450354297 (change=77.48465246426977 %)
[2026-03-15 20:30:12] 2026-03-16 00:29:22,667 | INFO     | sum of square deviations: 1748737904.5
[2026-03-15 20:30:12] 2026-03-16 00:29:22,668 | INFO     | sum of deviations: 1114134896.5000002
[2026-03-15 20:30:12] 2026-03-16 00:29:22,668 | INFO     | mean x: 1773615509.5
[2026-03-15 20:30:12] 2026-03-16 00:29:22,668 | INFO     | mean y: 2497933.095505618
[2026-03-15 20:30:12] 2026-03-16 00:29:22,668 | INFO     | intersect: -1127486684.394998
[2026-03-15 20:30:12] 2026-03-16 00:29:22,669 | INFO     | chi2: 0.00011447869947030418
[2026-03-15 20:30:12] 2026-03-16 00:29:22,669 | INFO     | current chi2=0.00011447869947030418 (change=6.068601028922169 %)
[2026-03-15 20:30:12] 2026-03-16 00:29:22,669 | INFO     | left removable region: 50
[2026-03-15 20:30:12] 2026-03-16 00:29:22,670 | INFO     | sum of square deviations: 984941258.0
[2026-03-15 20:30:12] 2026-03-16 00:29:22,671 | INFO     | sum of deviations: 446743870.0
[2026-03-15 20:30:12] 2026-03-16 00:29:22,671 | INFO     | mean x: 1773616089.0
[2026-03-15 20:30:12] 2026-03-16 00:29:22,671 | INFO     | mean y: 2498691.5918367347
[2026-03-15 20:30:12] 2026-03-16 00:29:22,671 | INFO     | intersect: -801967675.370044
[2026-03-15 20:30:12] 2026-03-16 00:29:22,671 | INFO     | chi2: 8.430481123099808e-05
[2026-03-15 20:30:12] 2026-03-16 00:29:22,672 | INFO     | current memory leak: 0.45 B/s (using 147 data points, chi2=0.00)
[2026-03-15 20:30:12] 2026-03-16 00:29:22,672 | INFO     | could have reported an average CPU frequency of 2999 MHz (10 samples)
[2026-03-15 20:30:12] 2026-03-16 00:29:22,673 | INFO     | ..............................
[2026-03-15 20:30:12] 2026-03-16 00:29:22,673 | INFO     | . Timing measurements:
[2026-03-15 20:30:12] 2026-03-16 00:29:22,673 | INFO     | . get job = 0 s
[2026-03-15 20:30:12] 2026-03-16 00:29:22,673 | INFO     | . initial setup = 5 s
[2026-03-15 20:30:12] 2026-03-16 00:29:22,673 | INFO     | . payload setup = 4 s
[2026-03-15 20:30:12] 2026-03-16 00:29:22,673 | INFO     | . stage-in = 0 s
[2026-03-15 20:30:12] 2026-03-16 00:29:22,673 | INFO     | . payload execution = 12371 s
[2026-03-15 20:30:12] 2026-03-16 00:29:22,674 | INFO     | . stage-out = 2 s
[2026-03-15 20:30:12] 2026-03-16 00:29:22,674 | INFO     | . log creation = 0 s
[2026-03-15 20:30:12] 2026-03-16 00:29:22,674 | INFO     | ..............................
[2026-03-15 20:30:12] 2026-03-16 00:29:22,818 | INFO     | 
[2026-03-15 20:30:12] 2026-03-16 00:29:22,818 | INFO     | job summary report
[2026-03-15 20:30:12] 2026-03-16 00:29:22,819 | INFO     | --------------------------------------------------
[2026-03-15 20:30:12] 2026-03-16 00:29:22,819 | INFO     | PanDA job id: 7050441149
[2026-03-15 20:30:12] 2026-03-16 00:29:22,819 | INFO     | task id: 48967094
[2026-03-15 20:30:12] 2026-03-16 00:29:22,819 | INFO     | errors: (none)
[2026-03-15 20:30:12] 2026-03-16 00:29:22,819 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-15 20:30:12] 2026-03-16 00:29:22,819 | INFO     | pilot state: finished 
[2026-03-15 20:30:12] 2026-03-16 00:29:22,820 | INFO     | transexitcode: 0
[2026-03-15 20:30:12] 2026-03-16 00:29:22,820 | INFO     | exeerrorcode: 0
[2026-03-15 20:30:12] 2026-03-16 00:29:22,820 | INFO     | exeerrordiag: 
[2026-03-15 20:30:12] 2026-03-16 00:29:22,820 | INFO     | exitcode: 0
[2026-03-15 20:30:12] 2026-03-16 00:29:22,820 | INFO     | exitmsg: OK
[2026-03-15 20:30:12] 2026-03-16 00:29:22,820 | INFO     | cpuconsumptiontime: 93744 s
[2026-03-15 20:30:12] 2026-03-16 00:29:22,820 | INFO     | nevents: 400
[2026-03-15 20:30:12] 2026-03-16 00:29:22,821 | INFO     | neventsw: 0
[2026-03-15 20:30:12] 2026-03-16 00:29:22,821 | INFO     | pid: 23931
[2026-03-15 20:30:12] 2026-03-16 00:29:22,821 | INFO     | pgrp: 23931
[2026-03-15 20:30:12] 2026-03-16 00:29:22,821 | INFO     | corecount: 8
[2026-03-15 20:30:12] 2026-03-16 00:29:22,821 | INFO     | event service: False
[2026-03-15 20:30:12] 2026-03-16 00:29:22,821 | INFO     | sizes: {0: 2280224, 11: 2280224, 12379: 2310122, 12381: 2319120, 12383: 2319176, 12385: 2319370}
[2026-03-15 20:30:12] 2026-03-16 00:29:22,822 | INFO     | --------------------------------------------------
[2026-03-15 20:30:12] 2026-03-16 00:29:22,822 | INFO     | 
[2026-03-15 20:30:12] 2026-03-16 00:29:22,822 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-03-15 20:30:12] 2026-03-16 00:29:22,841 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-15 20:30:12] 2026-03-16 00:29:22,842 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-15 20:30:12] 2026-03-16 00:29:22,842 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-15 20:30:12] 2026-03-16 00:29:22,842 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-15 20:30:12] 2026-03-16 00:29:22,842 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-15 20:30:12] 2026-03-16 00:29:22,842 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-15 20:30:12] 2026-03-16 00:29:22,843 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-15 20:30:12] 2026-03-16 00:29:22,843 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-15 20:30:12] 2026-03-16 00:29:22,843 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-15 20:30:12] 2026-03-16 00:29:22,843 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-15 20:30:12] 2026-03-16 00:29:22,843 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-15 20:30:12] 2026-03-16 00:29:22,843 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-15 20:30:12] 2026-03-16 00:29:22,844 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-15 20:30:12] 2026-03-16 00:29:22,844 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-15 20:30:12] 2026-03-16 00:29:22,844 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-15 20:30:12] 2026-03-16 00:29:22,844 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-15 20:30:12] 2026-03-16 00:29:22,844 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-15 20:30:12] 2026-03-16 00:29:22,844 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-15 20:30:12] 2026-03-16 00:29:22,844 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-15 20:30:12] 2026-03-16 00:29:22,845 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-15 20:30:12] 2026-03-16 00:29:22,845 | INFO     | job 7050441149 has completed (purged errors)
[2026-03-15 20:30:12] 2026-03-16 00:29:22,845 | INFO     | overall cleanup function is called
[2026-03-15 20:30:12] 2026-03-16 00:29:23,853 | INFO     | --- collectZombieJob: --- 10, [23931]
[2026-03-15 20:30:12] 2026-03-16 00:29:23,854 | INFO     | zombie collector waiting for pid 23931
[2026-03-15 20:30:12] 2026-03-16 00:29:23,854 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-15 20:30:12] 2026-03-16 00:29:23,854 | INFO     | collected zombie processes
[2026-03-15 20:30:12] 2026-03-16 00:29:23,854 | INFO     | will attempt to kill all subprocesses of pid=23931
[2026-03-15 20:30:12] 2026-03-16 00:29:24,105 | INFO     | process IDs to be killed: [23931] (in reverse order)
[2026-03-15 20:30:12] 2026-03-16 00:29:24,160 | WARNING  | found no corresponding commands to process id(s)
[2026-03-15 20:30:12] 2026-03-16 00:29:24,160 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-15 20:30:12] 2026-03-16 00:29:24,169 | INFO     | did not find any defunct processes belonging to 23931
[2026-03-15 20:30:12] 2026-03-16 00:29:24,177 | INFO     | did not find any defunct processes belonging to 23931
[2026-03-15 20:30:12] 2026-03-16 00:29:24,177 | INFO     | ready for new job
[2026-03-15 20:30:12] 2026-03-16 00:29:24,177 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-15 20:30:12] 2026-03-16 00:29:24,179 | INFO     | **************************************
[2026-03-15 20:30:12] 2026-03-16 00:29:24,179 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-15 20:30:12] 2026-03-16 00:29:24,180 | INFO     | **************************************
[2026-03-15 20:30:12] 2026-03-16 00:29:24,180 | INFO     | 
[2026-03-15 20:30:12] 2026-03-16 00:29:24,181 | INFO     | architecture information:
[2026-03-15 20:30:12] 2026-03-16 00:29:24,182 | INFO     | executing command: cat /etc/os-release
[2026-03-15 20:30:12] 2026-03-16 00:29:24,196 | INFO     | cat /etc/os-release:
[2026-03-15 20:30:12] NAME="CentOS Linux"
[2026-03-15 20:30:12] VERSION="7 (Core)"
[2026-03-15 20:30:12] ID="centos"
[2026-03-15 20:30:12] ID_LIKE="rhel fedora"
[2026-03-15 20:30:12] VERSION_ID="7"
[2026-03-15 20:30:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-15 20:30:12] ANSI_COLOR="0;31"
[2026-03-15 20:30:12] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-15 20:30:12] HOME_URL="https://www.centos.org/"
[2026-03-15 20:30:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-15 20:30:12] 
[2026-03-15 20:30:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-15 20:30:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-15 20:30:12] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-15 20:30:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-15 20:30:12] 
[2026-03-15 20:30:12] 2026-03-16 00:29:24,196 | INFO     | **************************************
[2026-03-15 20:30:12] 2026-03-16 00:29:24,700 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-03-15 20:30:12] 2026-03-16 00:29:24,719 | INFO     | sufficient remaining disk space (103755546624 B)
[2026-03-15 20:30:12] 2026-03-16 00:29:24,719 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-15 20:30:12] 2026-03-16 00:29:24,719 | INFO     | current server update state: UPDATING_FINAL
[2026-03-15 20:30:12] 2026-03-16 00:29:24,720 | INFO     | update_server=False
[2026-03-15 20:30:12] 2026-03-16 00:29:24,720 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-15 20:30:12] 2026-03-16 00:29:24,720 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-15 20:30:12] 2026-03-16 00:29:24,720 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-15 20:30:12] 2026-03-16 00:29:24,721 | INFO     | aborting loop
[2026-03-15 20:30:12] 2026-03-16 00:29:24,720 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-15 20:30:12] 2026-03-16 00:29:24,913 | INFO     | all payload control threads have been joined
[2026-03-15 20:30:12] 2026-03-16 00:29:25,486 | INFO     | all data control threads have been joined
[2026-03-15 20:30:12] 2026-03-16 00:29:25,725 | INFO     | [job] retrieve thread has finished
[2026-03-15 20:30:12] 2026-03-16 00:29:25,725 | INFO     | [job] job monitor thread has finished
[2026-03-15 20:30:12] 2026-03-16 00:29:25,728 | INFO     | [job] queue monitor thread has finished
[2026-03-15 20:30:12] 2026-03-16 00:29:25,729 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-15 20:30:12] 2026-03-16 00:29:25,819 | INFO     | [payload] failed_post thread has finished
[2026-03-15 20:30:12] 2026-03-16 00:29:25,919 | INFO     | [payload] control thread has finished
[2026-03-15 20:30:12] 2026-03-16 00:29:26,014 | INFO     | all job control threads have been joined
[2026-03-15 20:30:12] 2026-03-16 00:29:26,492 | INFO     | [data] control thread has finished
[2026-03-15 20:30:12] 2026-03-16 00:29:26,500 | INFO     | [payload] execute_payloads thread has finished
[2026-03-15 20:30:12] 2026-03-16 00:29:26,552 | INFO     | [payload] validate_pre thread has finished
[2026-03-15 20:30:12] 2026-03-16 00:29:26,673 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-15 20:30:12] 2026-03-16 00:29:26,727 | INFO     | [data] copytool_out thread has finished
[2026-03-15 20:30:12] 2026-03-16 00:29:26,890 | INFO     | [data] copytool_in thread has finished
[2026-03-15 20:30:12] 2026-03-16 00:29:26,928 | INFO     | [job] create_data_payload thread has finished
[2026-03-15 20:30:12] 2026-03-16 00:29:27,020 | INFO     | [job] control thread has finished
[2026-03-15 20:30:12] 2026-03-16 00:29:27,098 | INFO     | [job] validate thread has finished
[2026-03-15 20:30:12] 2026-03-16 00:29:27,200 | INFO     | [payload] validate_post thread has finished
[2026-03-15 20:30:12] 2026-03-16 00:29:30,682 | INFO     | [data] queue_monitor thread has finished
[2026-03-15 20:30:12] 2026-03-16 00:29:54,685 | INFO     | PID=17307 has CPU usage=5.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-15 20:30:12] 2026-03-16 00:29:54,686 | INFO     | .. there are 4 such processes running
[2026-03-15 20:30:12] 2026-03-16 00:29:54,687 | INFO     | found 0 job(s) in 20 queues
[2026-03-15 20:30:12] 2026-03-16 00:29:54,687 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-15 20:30:12] 2026-03-16 00:29:54,687 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-15 20:30:12] 2026-03-16 00:30:05,338 | INFO     | [monitor] cgroup control has ended
[2026-03-15 20:30:12] 2026-03-16 00:30:07,366 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139958655477568)>', '<ExcThread(monitor, started 139957901432576)>']
[2026-03-15 20:30:12] 2026-03-16 00:30:07,761 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-15 20:30:12] 2026-03-16 00:30:07,762 | INFO     | [monitor] control thread has ended
[2026-03-15 20:30:12] 2026-03-16 00:30:12,386 | INFO     | all workflow threads have been joined
[2026-03-15 20:30:12] 2026-03-16 00:30:12,387 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-15 20:30:12] 2026-03-16 00:30:12,387 | INFO     | traces error code: 0
[2026-03-15 20:30:12] 2026-03-16 00:30:12,387 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-15 20:30:12] 2026-03-16 00:30:12,485 [wrapper] ==== pilot stdout END ====
[2026-03-15 20:30:12] 2026-03-16 00:30:12,487 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-15 20:30:12] 2026-03-16 00:30:12,490 [wrapper] pilotpid: 17307
[2026-03-15 20:30:12] 2026-03-16 00:30:12,492 [wrapper] Pilot exit status: 0
[2026-03-15 20:30:12] 2026-03-16 00:30:12,502 [wrapper] pandaids: 7050441149
[2026-03-15 20:30:12] 2026-03-16 00:30:12,540 [wrapper] cleanup supervisor_pilot 46284 17308
[2026-03-15 20:30:12] 2026-03-16 00:30:12,543 [wrapper] Test setup, not cleaning
[2026-03-15 20:30:12] 2026-03-16 00:30:12,545 [wrapper] apfmon messages muted
[2026-03-15 20:30:12] 2026-03-16 00:30:12,548 [wrapper] ==== wrapper stdout END ====
[2026-03-15 20:30:12] 2026-03-16 00:30:12,551 [wrapper] ==== wrapper stderr END ====
[2026-03-15 20:30:12]  *** Error codes and diagnostics ***
[2026-03-15 20:30:12]     "exeErrorCode": 0,
[2026-03-15 20:30:12]     "exeErrorDiag": "",
[2026-03-15 20:30:12]     "pilotErrorCode": 0,
[2026-03-15 20:30:12]     "pilotErrorDiag": "",
[2026-03-15 20:30:12]  *** Listing of results directory ***
[2026-03-15 20:30:12] total 428168
[2026-03-15 20:30:12] -rw-r--r-- 1 boincer umatlas      5111 Mar 11 20:09 queuedata.json
[2026-03-15 20:30:12] -rwx------ 1 boincer umatlas     36322 Mar 11 20:09 runpilot2-wrapper.sh
[2026-03-15 20:30:12] -rw-r--r-- 1 boincer umatlas    585013 Mar 11 20:10 pilot3.tar.gz
[2026-03-15 20:30:12] -rw-r--r-- 1 boincer umatlas       100 Mar 15 17:02 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-15 20:30:12] -rwxr-xr-x 1 boincer umatlas      7986 Mar 15 17:02 run_atlas
[2026-03-15 20:30:12] -rw-r--r-- 1 boincer umatlas       105 Mar 15 17:02 job.xml
[2026-03-15 20:30:12] -rw-r--r-- 2 boincer umatlas 221594938 Mar 15 17:02 EVNT.48967092._000267.pool.root.1
[2026-03-15 20:30:12] drwxrwx--x 2 boincer umatlas      4096 Mar 15 17:02 shared
[2026-03-15 20:30:12] -rw-r--r-- 2 boincer umatlas    597530 Mar 15 17:02 input.tar.gz
[2026-03-15 20:30:12] -rw-r--r-- 2 boincer umatlas     15845 Mar 15 17:02 start_atlas.sh
[2026-03-15 20:30:12] -rw-r--r-- 1 boincer umatlas         0 Mar 15 17:02 boinc_lockfile
[2026-03-15 20:30:12] -rw-r--r-- 1 boincer umatlas      2597 Mar 15 17:02 pandaJob.out
[2026-03-15 20:30:12] -rw------- 1 boincer umatlas        57 Mar 15 17:02 setup.sh.local
[2026-03-15 20:30:12] -rw------- 1 boincer umatlas   1006454 Mar 15 17:02 agis_schedconf.cvmfs.json
[2026-03-15 20:30:12] -rw------- 1 boincer umatlas       438 Mar 15 17:02 workernode_map.json
[2026-03-15 20:30:12] drwx------ 5 boincer umatlas      4096 Mar 15 17:02 pilot3
[2026-03-15 20:30:12] -rw-r--r-- 1 boincer umatlas      6036 Mar 15 20:28 init_data.xml
[2026-03-15 20:30:12] -rw------- 1 boincer umatlas 208580654 Mar 15 20:28 HITS.48967094._005958.pool.root.1
[2026-03-15 20:30:12] -rw-r--r-- 1 boincer umatlas       530 Mar 15 20:28 boinc_task_state.xml
[2026-03-15 20:30:12] -rw------- 1 boincer umatlas      1046 Mar 15 20:29 memory_monitor_summary.json
[2026-03-15 20:30:12] -rw------- 1 boincer umatlas   1511579 Mar 15 20:29 agis_ddmendpoints.agis.ALL.json
[2026-03-15 20:30:12] -rw------- 1 boincer umatlas    430498 Mar 15 20:29 log.48967094._005958.job.log.tgz.1
[2026-03-15 20:30:12] -rw------- 1 boincer umatlas      6390 Mar 15 20:29 heartbeat.json
[2026-03-15 20:30:12] -rw------- 1 boincer umatlas        95 Mar 15 20:29 pilot_heartbeat.json
[2026-03-15 20:30:12] -rw-r--r-- 1 boincer umatlas        28 Mar 15 20:30 wrapper_checkpoint.txt
[2026-03-15 20:30:12] -rw-r--r-- 1 boincer umatlas      8192 Mar 15 20:30 boinc_mmap_file
[2026-03-15 20:30:12] -rw------- 1 boincer umatlas      4818 Mar 15 20:30 pilotlog.txt
[2026-03-15 20:30:12] -rw------- 1 boincer umatlas   1729607 Mar 15 20:30 log.48967094._005958.job.log.1
[2026-03-15 20:30:12] -rw------- 1 boincer umatlas       357 Mar 15 20:30 output.list
[2026-03-15 20:30:12] -rw-r--r-- 1 boincer umatlas       620 Mar 15 20:30 runtime_log
[2026-03-15 20:30:12] -rw------- 1 boincer umatlas   2181120 Mar 15 20:30 result.tar.gz
[2026-03-15 20:30:12] -rw-r--r-- 1 boincer umatlas      9332 Mar 15 20:30 runtime_log.err
[2026-03-15 20:30:12] -rw------- 1 boincer umatlas       660 Mar 15 20:30 JJVLDmhniK9n9Rq4apOajLDm4fhM0noT9bVooX4SDmXiiLDmL0R4en.diag
[2026-03-15 20:30:12] -rw-r--r-- 1 boincer umatlas     20875 Mar 15 20:30 stderr.txt
[2026-03-15 20:30:12] HITS file was successfully produced:
[2026-03-15 20:30:12] -rw------- 1 boincer umatlas 208580654 Mar 15 20:28 shared/HITS.pool.root.1
[2026-03-15 20:30:12]  *** Contents of shared directory: ***
[2026-03-15 20:30:12] total 422836
[2026-03-15 20:30:12] -rw-r--r-- 2 boincer umatlas 221594938 Mar 15 17:02 ATLAS.root_0
[2026-03-15 20:30:12] -rw-r--r-- 2 boincer umatlas    597530 Mar 15 17:02 input.tar.gz
[2026-03-15 20:30:12] -rw-r--r-- 2 boincer umatlas     15845 Mar 15 17:02 start_atlas.sh
[2026-03-15 20:30:12] -rw------- 1 boincer umatlas 208580654 Mar 15 20:28 HITS.pool.root.1
[2026-03-15 20:30:12] -rw------- 1 boincer umatlas   2181120 Mar 15 20:30 result.tar.gz
20:30:14 (12682): run_atlas exited; CPU time 94060.858723
20:30:14 (12682): called boinc_finish(0)

</stderr_txt>
]]>

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