Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
16:49:05 (7658): wrapper (7.7.26015): starting
16:49:05 (7658): wrapper: running run_atlas (--nthreads 8)
[2026-03-15 16:49:05] Arguments: --nthreads 8
[2026-03-15 16:49:05] Threads: 8
[2026-03-15 16:49:05] Checking for CVMFS
[2026-03-15 16:49:05] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-15 16:49:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-15 16:49:06] Running cvmfs_config stat atlas.cern.ch
[2026-03-15 16:49:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-15 16:49:06] 2.11.2.0 2811 9012 80088 157327 2 1 12907630 20275201 1 130560 0 3329519 99.981 340864 7900 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-15 16:49:06] CVMFS is ok
[2026-03-15 16:49:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-15 16:49:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-15 16:49:06] Further information can be found at the LHC@home message board.
[2026-03-15 16:49:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-15 16:49:06] Checking for apptainer binary...
[2026-03-15 16:49:06] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-15 16:49:06] Running /usr/bin/apptainer --version
[2026-03-15 16:49:06] apptainer version 1.3.2-1.el7
[2026-03-15 16:49:06] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-15 16:49:08] c-204-24.aglt2.org
[2026-03-15 16:49:08] apptainer works
[2026-03-15 16:49:08] Set ATHENA_PROC_NUMBER=8
[2026-03-15 16:49:08] Set ATHENA_CORE_NUMBER=8
[2026-03-15 16:49:08] Starting ATLAS job with PandaID=7045263757
[2026-03-15 16:49:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-15 18:44:03]  *** The last 200 lines of the pilot log: ***
[2026-03-15 18:44:04] 2026-03-15 22:43:31,357 | INFO     | preparing for final server update for job 7045263757 in state='finished'
[2026-03-15 18:44:04] 2026-03-15 22:43:31,358 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-7045263757/jobReport.json
[2026-03-15 18:44:04] 2026-03-15 22:43:31,361 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-03-15 18:44:04] 2026-03-15 22:43:31,362 | INFO     | this job has now completed (state=finished)
[2026-03-15 18:44:04] 2026-03-15 22:43:31,362 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-15 18:44:04] 2026-03-15 22:43:31,362 | INFO     | log transfer has been attempted: DONE
[2026-03-15 18:44:04] 2026-03-15 22:43:31,362 | INFO     | job 7045263757 has finished - writing final server update
[2026-03-15 18:44:04] 2026-03-15 22:43:31,363 | INFO     | total number of processed events: 400 (read)
[2026-03-15 18:44:04] 2026-03-15 22:43:31,365 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7045263757/memory_monitor_summary.json (trf name=prmon)
[2026-03-15 18:44:04] 2026-03-15 22:43:31,366 | INFO     | extracted standard info from prmon json
[2026-03-15 18:44:04] 2026-03-15 22:43:31,366 | INFO     | extracted standard memory fields from prmon json
[2026-03-15 18:44:04] 2026-03-15 22:43:31,366 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-15 18:44:04] 2026-03-15 22:43:31,367 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-15 18:44:04] 2026-03-15 22:43:31,367 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-15 18:44:04] 2026-03-15 22:43:31,370 | INFO     | fitting pss+swap vs Time
[2026-03-15 18:44:04] 2026-03-15 22:43:31,370 | INFO     | sum of square deviations: 435610028.0
[2026-03-15 18:44:04] 2026-03-15 22:43:31,371 | INFO     | sum of deviations: 5162464770.0
[2026-03-15 18:44:04] 2026-03-15 22:43:31,371 | INFO     | mean x: 1773611185.5
[2026-03-15 18:44:04] 2026-03-15 22:43:31,371 | INFO     | mean y: 2525200.3571428573
[2026-03-15 18:44:04] 2026-03-15 22:43:31,371 | INFO     | intersect: -21016745873.039
[2026-03-15 18:44:04] 2026-03-15 22:43:31,371 | INFO     | chi2: 1.6055869221296306
[2026-03-15 18:44:04] 2026-03-15 22:43:31,371 | INFO     | sum of square deviations: 379832238.0
[2026-03-15 18:44:04] 2026-03-15 22:43:31,372 | INFO     | sum of deviations: 5069759409.999998
[2026-03-15 18:44:04] 2026-03-15 22:43:31,372 | INFO     | mean x: 1773611033.0
[2026-03-15 18:44:04] 2026-03-15 22:43:31,372 | INFO     | mean y: 2524946.803738318
[2026-03-15 18:44:04] 2026-03-15 22:43:31,372 | INFO     | intersect: -23670508368.055565
[2026-03-15 18:44:04] 2026-03-15 22:43:31,373 | INFO     | chi2: 1.6083550398611235
[2026-03-15 18:44:04] 2026-03-15 22:43:31,373 | INFO     | current chi2=1.6083550398611235 (change=-0.1724053486821681 %)
[2026-03-15 18:44:04] 2026-03-15 22:43:31,373 | INFO     | right removable region: 106
[2026-03-15 18:44:04] 2026-03-15 22:43:31,373 | INFO     | sum of square deviations: 379832238.0
[2026-03-15 18:44:04] 2026-03-15 22:43:31,374 | INFO     | sum of deviations: -11776899607.999998
[2026-03-15 18:44:04] 2026-03-15 22:43:31,374 | INFO     | mean x: 1773611338.0
[2026-03-15 18:44:04] 2026-03-15 22:43:31,374 | INFO     | mean y: 2570548.074766355
[2026-03-15 18:44:04] 2026-03-15 22:43:31,374 | INFO     | intersect: 54994328965.47522
[2026-03-15 18:44:04] 2026-03-15 22:43:31,374 | INFO     | chi2: 0.09907859755337917
[2026-03-15 18:44:04] 2026-03-15 22:43:31,374 | INFO     | current chi2=0.09907859755337917 (change=93.82913524096456 %)
[2026-03-15 18:44:04] 2026-03-15 22:43:31,375 | INFO     | sum of square deviations: 329031285.5
[2026-03-15 18:44:04] 2026-03-15 22:43:31,375 | INFO     | sum of deviations: -10198739206.0
[2026-03-15 18:44:04] 2026-03-15 22:43:31,375 | INFO     | mean x: 1773611490.5
[2026-03-15 18:44:04] 2026-03-15 22:43:31,375 | INFO     | mean y: 2565682.0
[2026-03-15 18:44:04] 2026-03-15 22:43:31,376 | INFO     | intersect: 54977888216.71516
[2026-03-15 18:44:04] 2026-03-15 22:43:31,376 | INFO     | chi2: 0.08874868380533353
[2026-03-15 18:44:04] 2026-03-15 22:43:31,376 | INFO     | current chi2=0.08874868380533353 (change=10.425978973390631 %)
[2026-03-15 18:44:04] 2026-03-15 22:43:31,376 | INFO     | left removable region: 20
[2026-03-15 18:44:04] 2026-03-15 22:43:31,376 | INFO     | sum of square deviations: 197203697.5
[2026-03-15 18:44:04] 2026-03-15 22:43:31,377 | INFO     | sum of deviations: -3330759454.0
[2026-03-15 18:44:04] 2026-03-15 22:43:31,377 | INFO     | mean x: 1773611612.5
[2026-03-15 18:44:04] 2026-03-15 22:43:31,377 | INFO     | mean y: 2543125.8139534886
[2026-03-15 18:44:04] 2026-03-15 22:43:31,377 | INFO     | intersect: 29958744358.08831
[2026-03-15 18:44:04] 2026-03-15 22:43:31,377 | INFO     | chi2: 0.05314518681639546
[2026-03-15 18:44:04] 2026-03-15 22:43:31,377 | INFO     | current memory leak: -16.89 B/s (using 86 data points, chi2=0.05)
[2026-03-15 18:44:04] 2026-03-15 22:43:31,378 | INFO     | could have reported an average CPU frequency of 1679 MHz (7 samples)
[2026-03-15 18:44:04] 2026-03-15 22:43:31,378 | INFO     | ..............................
[2026-03-15 18:44:04] 2026-03-15 22:43:31,378 | INFO     | . Timing measurements:
[2026-03-15 18:44:04] 2026-03-15 22:43:31,378 | INFO     | . get job = 0 s
[2026-03-15 18:44:04] 2026-03-15 22:43:31,378 | INFO     | . initial setup = 8 s
[2026-03-15 18:44:04] 2026-03-15 22:43:31,378 | INFO     | . payload setup = 8 s
[2026-03-15 18:44:04] 2026-03-15 22:43:31,379 | INFO     | . stage-in = 0 s
[2026-03-15 18:44:04] 2026-03-15 22:43:31,379 | INFO     | . payload execution = 6807 s
[2026-03-15 18:44:04] 2026-03-15 22:43:31,379 | INFO     | . stage-out = 0 s
[2026-03-15 18:44:04] 2026-03-15 22:43:31,379 | INFO     | . log creation = 0 s
[2026-03-15 18:44:04] 2026-03-15 22:43:31,379 | INFO     | ..............................
[2026-03-15 18:44:04] 2026-03-15 22:43:31,461 | INFO     | 
[2026-03-15 18:44:04] 2026-03-15 22:43:31,462 | INFO     | job summary report
[2026-03-15 18:44:04] 2026-03-15 22:43:31,462 | INFO     | --------------------------------------------------
[2026-03-15 18:44:04] 2026-03-15 22:43:31,462 | INFO     | PanDA job id: 7045263757
[2026-03-15 18:44:04] 2026-03-15 22:43:31,463 | INFO     | task id: 48955010
[2026-03-15 18:44:04] 2026-03-15 22:43:31,463 | INFO     | errors: (none)
[2026-03-15 18:44:04] 2026-03-15 22:43:31,463 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-15 18:44:04] 2026-03-15 22:43:31,463 | INFO     | pilot state: finished 
[2026-03-15 18:44:04] 2026-03-15 22:43:31,463 | INFO     | transexitcode: 0
[2026-03-15 18:44:04] 2026-03-15 22:43:31,463 | INFO     | exeerrorcode: 0
[2026-03-15 18:44:04] 2026-03-15 22:43:31,464 | INFO     | exeerrordiag: 
[2026-03-15 18:44:04] 2026-03-15 22:43:31,464 | INFO     | exitcode: 0
[2026-03-15 18:44:04] 2026-03-15 22:43:31,464 | INFO     | exitmsg: OK
[2026-03-15 18:44:04] 2026-03-15 22:43:31,464 | INFO     | cpuconsumptiontime: 50295 s
[2026-03-15 18:44:04] 2026-03-15 22:43:31,464 | INFO     | nevents: 400
[2026-03-15 18:44:04] 2026-03-15 22:43:31,464 | INFO     | neventsw: 0
[2026-03-15 18:44:04] 2026-03-15 22:43:31,465 | INFO     | pid: 16162
[2026-03-15 18:44:04] 2026-03-15 22:43:31,465 | INFO     | pgrp: 16162
[2026-03-15 18:44:04] 2026-03-15 22:43:31,465 | INFO     | corecount: 8
[2026-03-15 18:44:04] 2026-03-15 22:43:31,465 | INFO     | event service: False
[2026-03-15 18:44:04] 2026-03-15 22:43:31,465 | INFO     | sizes: {0: 2279748, 1: 2280209, 11: 2280209, 6820: 2307462, 6821: 2307461, 6823: 2316515, 6824: 2316699, 6827: 2316893}
[2026-03-15 18:44:04] 2026-03-15 22:43:31,466 | INFO     | --------------------------------------------------
[2026-03-15 18:44:04] 2026-03-15 22:43:31,466 | INFO     | 
[2026-03-15 18:44:04] 2026-03-15 22:43:31,466 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-03-15 18:44:04] 2026-03-15 22:43:31,497 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-15 18:44:04] 2026-03-15 22:43:31,497 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-15 18:44:04] 2026-03-15 22:43:31,498 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-15 18:44:04] 2026-03-15 22:43:31,498 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-15 18:44:04] 2026-03-15 22:43:31,498 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-15 18:44:04] 2026-03-15 22:43:31,498 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-15 18:44:04] 2026-03-15 22:43:31,498 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-15 18:44:04] 2026-03-15 22:43:31,499 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-15 18:44:04] 2026-03-15 22:43:31,499 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-15 18:44:04] 2026-03-15 22:43:31,499 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-15 18:44:04] 2026-03-15 22:43:31,499 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-15 18:44:04] 2026-03-15 22:43:31,499 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-15 18:44:04] 2026-03-15 22:43:31,500 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-15 18:44:04] 2026-03-15 22:43:31,500 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-15 18:44:04] 2026-03-15 22:43:31,500 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-15 18:44:04] 2026-03-15 22:43:31,500 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-15 18:44:04] 2026-03-15 22:43:31,500 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-15 18:44:04] 2026-03-15 22:43:31,500 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-15 18:44:04] 2026-03-15 22:43:31,500 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-15 18:44:04] 2026-03-15 22:43:31,501 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-15 18:44:04] 2026-03-15 22:43:31,501 | INFO     | job 7045263757 has completed (purged errors)
[2026-03-15 18:44:04] 2026-03-15 22:43:31,501 | INFO     | overall cleanup function is called
[2026-03-15 18:44:04] 2026-03-15 22:43:32,509 | INFO     | --- collectZombieJob: --- 10, [16162]
[2026-03-15 18:44:04] 2026-03-15 22:43:32,510 | INFO     | zombie collector waiting for pid 16162
[2026-03-15 18:44:04] 2026-03-15 22:43:32,510 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-15 18:44:04] 2026-03-15 22:43:32,510 | INFO     | collected zombie processes
[2026-03-15 18:44:04] 2026-03-15 22:43:32,510 | INFO     | will attempt to kill all subprocesses of pid=16162
[2026-03-15 18:44:04] 2026-03-15 22:43:32,602 | INFO     | process IDs to be killed: [16162] (in reverse order)
[2026-03-15 18:44:04] 2026-03-15 22:43:32,662 | WARNING  | found no corresponding commands to process id(s)
[2026-03-15 18:44:04] 2026-03-15 22:43:32,662 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-15 18:44:04] 2026-03-15 22:43:32,667 | INFO     | did not find any defunct processes belonging to 16162
[2026-03-15 18:44:04] 2026-03-15 22:43:32,670 | INFO     | did not find any defunct processes belonging to 16162
[2026-03-15 18:44:04] 2026-03-15 22:43:32,671 | INFO     | ready for new job
[2026-03-15 18:44:04] 2026-03-15 22:43:32,671 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-15 18:44:04] 2026-03-15 22:43:32,673 | INFO     | **************************************
[2026-03-15 18:44:04] 2026-03-15 22:43:32,673 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-15 18:44:04] 2026-03-15 22:43:32,673 | INFO     | **************************************
[2026-03-15 18:44:04] 2026-03-15 22:43:32,673 | INFO     | 
[2026-03-15 18:44:04] 2026-03-15 22:43:32,674 | INFO     | architecture information:
[2026-03-15 18:44:04] 2026-03-15 22:43:32,674 | INFO     | executing command: cat /etc/os-release
[2026-03-15 18:44:04] 2026-03-15 22:43:32,692 | INFO     | cat /etc/os-release:
[2026-03-15 18:44:04] NAME="CentOS Linux"
[2026-03-15 18:44:04] VERSION="7 (Core)"
[2026-03-15 18:44:04] ID="centos"
[2026-03-15 18:44:04] ID_LIKE="rhel fedora"
[2026-03-15 18:44:04] VERSION_ID="7"
[2026-03-15 18:44:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-15 18:44:04] ANSI_COLOR="0;31"
[2026-03-15 18:44:04] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-15 18:44:04] HOME_URL="https://www.centos.org/"
[2026-03-15 18:44:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-15 18:44:04] 
[2026-03-15 18:44:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-15 18:44:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-15 18:44:04] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-15 18:44:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-15 18:44:04] 
[2026-03-15 18:44:04] 2026-03-15 22:43:32,693 | INFO     | **************************************
[2026-03-15 18:44:04] 2026-03-15 22:43:33,196 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-03-15 18:44:04] 2026-03-15 22:43:33,216 | INFO     | sufficient remaining disk space (18246270976 B)
[2026-03-15 18:44:04] 2026-03-15 22:43:33,216 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-15 18:44:04] 2026-03-15 22:43:33,217 | INFO     | current server update state: UPDATING_FINAL
[2026-03-15 18:44:04] 2026-03-15 22:43:33,217 | INFO     | update_server=False
[2026-03-15 18:44:04] 2026-03-15 22:43:33,217 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-15 18:44:04] 2026-03-15 22:43:33,218 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-15 18:44:04] 2026-03-15 22:43:33,218 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-15 18:44:04] 2026-03-15 22:43:33,516 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-15 18:44:04] 2026-03-15 22:43:33,516 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-15 18:44:04] 2026-03-15 22:43:33,516 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-15 18:44:04] 2026-03-15 22:43:33,516 | INFO     | all job control threads have been joined
[2026-03-15 18:44:04] 2026-03-15 22:43:33,517 | INFO     | will abort loop
[2026-03-15 18:44:04] 2026-03-15 22:43:33,672 | INFO     | all data control threads have been joined
[2026-03-15 18:44:04] 2026-03-15 22:43:34,101 | INFO     | all payload control threads have been joined
[2026-03-15 18:44:04] 2026-03-15 22:43:34,223 | INFO     | [job] retrieve thread has finished
[2026-03-15 18:44:04] 2026-03-15 22:43:34,223 | INFO     | [job] queue monitor thread has finished
[2026-03-15 18:44:04] 2026-03-15 22:43:34,353 | INFO     | [data] copytool_in thread has finished
[2026-03-15 18:44:04] 2026-03-15 22:43:34,452 | INFO     | [payload] validate_post thread has finished
[2026-03-15 18:44:04] 2026-03-15 22:43:34,522 | INFO     | [job] job monitor thread has finished
[2026-03-15 18:44:04] 2026-03-15 22:43:34,522 | INFO     | [job] control thread has finished
[2026-03-15 18:44:04] 2026-03-15 22:43:34,678 | INFO     | [data] control thread has finished
[2026-03-15 18:44:04] 2026-03-15 22:43:34,937 | INFO     | [payload] failed_post thread has finished
[2026-03-15 18:44:04] 2026-03-15 22:43:35,106 | INFO     | [payload] control thread has finished
[2026-03-15 18:44:04] 2026-03-15 22:43:35,129 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-15 18:44:04] 2026-03-15 22:43:35,147 | INFO     | [payload] validate_pre thread has finished
[2026-03-15 18:44:04] 2026-03-15 22:43:35,157 | INFO     | [job] validate thread has finished
[2026-03-15 18:44:04] 2026-03-15 22:43:35,224 | INFO     | [data] copytool_out thread has finished
[2026-03-15 18:44:04] 2026-03-15 22:43:35,239 | INFO     | [job] create_data_payload thread has finished
[2026-03-15 18:44:04] 2026-03-15 22:43:35,368 | INFO     | [payload] execute_payloads thread has finished
[2026-03-15 18:44:04] 2026-03-15 22:43:39,135 | INFO     | [data] queue_monitor thread has finished
[2026-03-15 18:44:04] 2026-03-15 22:43:43,957 | INFO     | job.realtimelogging is not enabled
[2026-03-15 18:44:04] 2026-03-15 22:43:44,387 | INFO     | [monitor] cgroup control has ended
[2026-03-15 18:44:04] 2026-03-15 22:43:44,962 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-15 18:44:04] 2026-03-15 22:43:46,831 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140424940746560)>', '<ExcThread(monitor, started 140424291284736)>']
[2026-03-15 18:44:04] 2026-03-15 22:43:51,846 | INFO     | all workflow threads have been joined
[2026-03-15 18:44:04] 2026-03-15 22:43:51,846 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-15 18:44:04] 2026-03-15 22:43:51,847 | INFO     | traces error code: 0
[2026-03-15 18:44:04] 2026-03-15 22:43:51,847 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-15 18:44:04] 2026-03-15 22:44:03,652 | INFO     | PID=11716 has CPU usage=3.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-15 18:44:04] 2026-03-15 22:44:03,653 | INFO     | found 0 job(s) in 20 queues
[2026-03-15 18:44:04] 2026-03-15 22:44:03,653 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-15 18:44:04] 2026-03-15 22:44:03,653 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-15 18:44:04] 2026-03-15 22:44:03,654 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-15 18:44:04] 2026-03-15 22:44:03,654 | CRITICAL | thread 'MainThread' is not alive
[2026-03-15 18:44:04] 2026-03-15 22:44:03,654 | INFO     | [monitor] control thread has ended
[2026-03-15 18:44:04] 2026-03-15 22:44:03,760 [wrapper] ==== pilot stdout END ====
[2026-03-15 18:44:04] 2026-03-15 22:44:03,764 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-15 18:44:04] 2026-03-15 22:44:03,769 [wrapper] pilotpid: 11716
[2026-03-15 18:44:04] 2026-03-15 22:44:03,773 [wrapper] Pilot exit status: 0
[2026-03-15 18:44:04] 2026-03-15 22:44:03,792 [wrapper] pandaids: 7045263757
[2026-03-15 18:44:04] 2026-03-15 22:44:03,838 [wrapper] cleanup supervisor_pilot 22639 11717
[2026-03-15 18:44:04] 2026-03-15 22:44:03,843 [wrapper] Test setup, not cleaning
[2026-03-15 18:44:04] 2026-03-15 22:44:03,848 [wrapper] apfmon messages muted
[2026-03-15 18:44:04] 2026-03-15 22:44:03,852 [wrapper] ==== wrapper stdout END ====
[2026-03-15 18:44:04] 2026-03-15 22:44:03,857 [wrapper] ==== wrapper stderr END ====
[2026-03-15 18:44:04]  *** Error codes and diagnostics ***
[2026-03-15 18:44:04]     "exeErrorCode": 0,
[2026-03-15 18:44:04]     "exeErrorDiag": "",
[2026-03-15 18:44:04]     "pilotErrorCode": 0,
[2026-03-15 18:44:04]     "pilotErrorDiag": "",
[2026-03-15 18:44:04]  *** Listing of results directory ***
[2026-03-15 18:44:04] total 617776
[2026-03-15 18:44:04] -rw-r--r-- 1 boincer umatlas    585013 Mar 13 18:28 pilot3.tar.gz
[2026-03-15 18:44:04] -rwx------ 1 boincer umatlas     36322 Mar 13 18:31 runpilot2-wrapper.sh
[2026-03-15 18:44:04] -rw-r--r-- 1 boincer umatlas      5111 Mar 13 18:33 queuedata.json
[2026-03-15 18:44:04] -rw-r--r-- 1 boincer umatlas       100 Mar 15 16:49 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-15 18:44:04] -rwxr-xr-x 1 boincer umatlas      7986 Mar 15 16:49 run_atlas
[2026-03-15 18:44:04] -rw-r--r-- 1 boincer umatlas       105 Mar 15 16:49 job.xml
[2026-03-15 18:44:04] -rw-r--r-- 2 boincer umatlas 441962979 Mar 15 16:49 EVNT.46701403._001687.pool.root.1
[2026-03-15 18:44:04] -rw-r--r-- 2 boincer umatlas     15845 Mar 15 16:49 start_atlas.sh
[2026-03-15 18:44:04] drwxrwx--x 2 boincer umatlas      4096 Mar 15 16:49 shared
[2026-03-15 18:44:04] -rw-r--r-- 2 boincer umatlas    597527 Mar 15 16:49 input.tar.gz
[2026-03-15 18:44:04] -rw-r--r-- 1 boincer umatlas         0 Mar 15 16:49 boinc_lockfile
[2026-03-15 18:44:04] -rw-r--r-- 1 boincer umatlas      2564 Mar 15 16:49 pandaJob.out
[2026-03-15 18:44:04] -rw------- 1 boincer umatlas        57 Mar 15 16:49 setup.sh.local
[2026-03-15 18:44:04] -rw------- 1 boincer umatlas   1006454 Mar 15 16:49 agis_schedconf.cvmfs.json
[2026-03-15 18:44:04] -rw------- 1 boincer umatlas   1511579 Mar 15 16:49 agis_ddmendpoints.agis.ALL.json
[2026-03-15 18:44:04] -rw------- 1 boincer umatlas       432 Mar 15 16:49 workernode_map.json
[2026-03-15 18:44:04] drwx------ 5 boincer umatlas      4096 Mar 15 16:49 pilot3
[2026-03-15 18:44:04] -rw------- 1 boincer umatlas 183996260 Mar 15 18:42 HITS.48955010._034675.pool.root.1
[2026-03-15 18:44:04] -rw-r--r-- 1 boincer umatlas       531 Mar 15 18:43 boinc_task_state.xml
[2026-03-15 18:44:04] -rw------- 1 boincer umatlas      1046 Mar 15 18:43 memory_monitor_summary.json
[2026-03-15 18:44:04] -rw------- 1 boincer umatlas    389081 Mar 15 18:43 log.48955010._034675.job.log.tgz.1
[2026-03-15 18:44:04] -rw------- 1 boincer umatlas      6407 Mar 15 18:43 heartbeat.json
[2026-03-15 18:44:04] -rw-r--r-- 1 boincer umatlas      5910 Mar 15 18:43 init_data.xml
[2026-03-15 18:44:04] -rw-r--r-- 1 boincer umatlas      8192 Mar 15 18:43 boinc_mmap_file
[2026-03-15 18:44:04] -rw-r--r-- 1 boincer umatlas        27 Mar 15 18:43 wrapper_checkpoint.txt
[2026-03-15 18:44:04] -rw------- 1 boincer umatlas        95 Mar 15 18:44 pilot_heartbeat.json
[2026-03-15 18:44:04] -rw------- 1 boincer umatlas       815 Mar 15 18:44 pilotlog.txt
[2026-03-15 18:44:04] -rw------- 1 boincer umatlas    968975 Mar 15 18:44 log.48955010._034675.job.log.1
[2026-03-15 18:44:04] -rw------- 1 boincer umatlas       357 Mar 15 18:44 output.list
[2026-03-15 18:44:04] -rw-r--r-- 1 boincer umatlas       620 Mar 15 18:44 runtime_log
[2026-03-15 18:44:04] -rw------- 1 boincer umatlas   1372160 Mar 15 18:44 result.tar.gz
[2026-03-15 18:44:04] -rw-r--r-- 1 boincer umatlas      9341 Mar 15 18:44 runtime_log.err
[2026-03-15 18:44:04] -rw------- 1 boincer umatlas       658 Mar 15 18:44 fOZMDmWDQL9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDml9qLDmgxHE6m.diag
[2026-03-15 18:44:04] -rw-r--r-- 1 boincer umatlas     21202 Mar 15 18:44 stderr.txt
[2026-03-15 18:44:04] HITS file was successfully produced:
[2026-03-15 18:44:04] -rw------- 1 boincer umatlas 183996260 Mar 15 18:42 shared/HITS.pool.root.1
[2026-03-15 18:44:04]  *** Contents of shared directory: ***
[2026-03-15 18:44:04] total 613236
[2026-03-15 18:44:04] -rw-r--r-- 2 boincer umatlas 441962979 Mar 15 16:49 ATLAS.root_0
[2026-03-15 18:44:04] -rw-r--r-- 2 boincer umatlas     15845 Mar 15 16:49 start_atlas.sh
[2026-03-15 18:44:04] -rw-r--r-- 2 boincer umatlas    597527 Mar 15 16:49 input.tar.gz
[2026-03-15 18:44:04] -rw------- 1 boincer umatlas 183996260 Mar 15 18:42 HITS.pool.root.1
[2026-03-15 18:44:04] -rw------- 1 boincer umatlas   1372160 Mar 15 18:44 result.tar.gz
18:44:05 (7658): run_atlas exited; CPU time 50317.424219
18:44:05 (7658): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN