Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:27:59 (1400887): wrapper (7.7.26015): starting
03:27:59 (1400887): wrapper: running run_atlas (--nthreads 12)
[2026-03-16 03:27:59] Arguments: --nthreads 12
[2026-03-16 03:27:59] Threads: 12
[2026-03-16 03:27:59] Checking for CVMFS
[2026-03-16 03:27:59] No cvmfs_config command found, will try listing directly
[2026-03-16 03:27:59] CVMFS is ok
[2026-03-16 03:27:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-16 03:27:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-16 03:27:59] Further information can be found at the LHC@home message board.
[2026-03-16 03:27:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-16 03:27:59] Checking for apptainer binary...
[2026-03-16 03:27:59] which: no apptainer in ((null))
[2026-03-16 03:27:59] apptainer is not installed, using version from CVMFS
[2026-03-16 03:27:59] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-16 03:27:59] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot256/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut18.grid.cesnet.cz
[2026-03-16 03:27:59] apptainer works
[2026-03-16 03:27:59] Set ATHENA_PROC_NUMBER=12
[2026-03-16 03:27:59] Set ATHENA_CORE_NUMBER=12
[2026-03-16 03:27:59] Starting ATLAS job with PandaID=7056111749
[2026-03-16 03:27:59] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot256/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-16 04:02:18]  *** The last 200 lines of the pilot log: ***
[2026-03-16 04:02:18]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-16 04:02:18]  is_altstaged=None
[2026-03-16 04:02:18]  is_tar=False
[2026-03-16 04:02:18]  lfn=log.48967094._010270.job.log.tgz.1
[2026-03-16 04:02:18]  mtime=0
[2026-03-16 04:02:18]  protocol_id=None
[2026-03-16 04:02:18]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-16 04:02:18]  replicas=None
[2026-03-16 04:02:18]  scope=mc23_13p6TeV
[2026-03-16 04:02:18]  status=None
[2026-03-16 04:02:18]  status_code=0
[2026-03-16 04:02:18]  storage_token=
[2026-03-16 04:02:18]  surl=/var/lib/boinc/var/slot256/slots/0/PanDA_Pilot-7056111749/log.48967094._010270.job.log.tgz.1
[2026-03-16 04:02:18]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/22/aa/log.48967094._010270.job.log.tgz.1
[2026-03-16 04:02:18]  workdir=None
[2026-03-16 04:02:18] ]
[2026-03-16 04:02:18] 2026-03-16 03:01:18,807 | INFO     | transferring file log.48967094._010270.job.log.tgz.1 from /var/lib/boinc/var/slot256/slots/0/PanDA_Pilot-7056111749/log.48967094._010270.job.log.tgz.1 to /var/lib/
[2026-03-16 04:02:18] 2026-03-16 03:01:18,807 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot256/slots/0/PanDA_Pilot-7056111749/log.48967094._010270.job.log.tgz.1 /var/lib/boinc/var/slot256/slots/0/
[2026-03-16 04:02:18] 2026-03-16 03:01:18,822 | INFO     | adding to output.list: log.48967094._010270.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/22/aa/log.48967094._010270.job.log.tg
[2026-03-16 04:02:18] 2026-03-16 03:01:18,822 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-16 04:02:18] 2026-03-16 03:01:18,823 | INFO     | summary of transferred files:
[2026-03-16 04:02:18] 2026-03-16 03:01:18,823 | INFO     |  -- lfn=log.48967094._010270.job.log.tgz.1, status_code=0, status=transferred
[2026-03-16 04:02:18] 2026-03-16 03:01:18,823 | INFO     | stage-out finished correctly
[2026-03-16 04:02:18] 2026-03-16 03:01:18,873 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-16 04:02:18] 2026-03-16 03:01:19,001 | INFO     | job 7056111749 has state=finished
[2026-03-16 04:02:18] 2026-03-16 03:01:19,002 | INFO     | preparing for final server update for job 7056111749 in state='finished'
[2026-03-16 04:02:18] 2026-03-16 03:01:19,002 | INFO     | reading metadata from: /var/lib/boinc/var/slot256/slots/0/PanDA_Pilot-7056111749/jobReport.json
[2026-03-16 04:02:18] 2026-03-16 03:01:19,003 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot256/slots/0/workernode_map.json
[2026-03-16 04:02:18] 2026-03-16 03:01:19,003 | INFO     | this job has now completed (state=finished)
[2026-03-16 04:02:18] 2026-03-16 03:01:19,003 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-16 04:02:18] 2026-03-16 03:01:19,003 | INFO     | log transfer has been attempted: DONE
[2026-03-16 04:02:18] 2026-03-16 03:01:19,004 | INFO     | job 7056111749 has finished - writing final server update
[2026-03-16 04:02:18] 2026-03-16 03:01:19,004 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_17545/.job.ad'
[2026-03-16 04:02:18] 2026-03-16 03:01:19,004 | INFO     | total number of processed events: 400 (read)
[2026-03-16 04:02:18] 2026-03-16 03:01:19,020 | INFO     | using path: /var/lib/boinc/var/slot256/slots/0/PanDA_Pilot-7056111749/memory_monitor_summary.json (trf name=prmon)
[2026-03-16 04:02:18] 2026-03-16 03:01:19,021 | INFO     | extracted standard info from prmon json
[2026-03-16 04:02:18] 2026-03-16 03:01:19,021 | INFO     | extracted standard memory fields from prmon json
[2026-03-16 04:02:18] 2026-03-16 03:01:19,021 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-16 04:02:18] 2026-03-16 03:01:19,021 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-16 04:02:18] 2026-03-16 03:01:19,021 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-16 04:02:18] 2026-03-16 03:01:19,022 | INFO     | fitting pss+swap vs Time
[2026-03-16 04:02:18] 2026-03-16 03:01:19,022 | INFO     | sum of square deviations: 5441962.5
[2026-03-16 04:02:18] 2026-03-16 03:01:19,022 | INFO     | sum of deviations: 164488635.0
[2026-03-16 04:02:18] 2026-03-16 03:01:19,022 | INFO     | mean x: 1773629176.5
[2026-03-16 04:02:18] 2026-03-16 03:01:19,022 | INFO     | mean y: 2792884.153846154
[2026-03-16 04:02:18] 2026-03-16 03:01:19,022 | INFO     | intersect: -53606882345.81311
[2026-03-16 04:02:18] 2026-03-16 03:01:19,022 | INFO     | chi2: 0.0011362626551327485
[2026-03-16 04:02:18] 2026-03-16 03:01:19,022 | INFO     | current memory leak: 30.23 B/s (using 26 data points, chi2=0.00)
[2026-03-16 04:02:18] 2026-03-16 03:01:19,022 | INFO     | could have reported an average CPU frequency of 3619 MHz (5 samples)
[2026-03-16 04:02:18] 2026-03-16 03:01:19,022 | INFO     | ..............................
[2026-03-16 04:02:18] 2026-03-16 03:01:19,022 | INFO     | . Timing measurements:
[2026-03-16 04:02:18] 2026-03-16 03:01:19,022 | INFO     | . get job = 0 s
[2026-03-16 04:02:18] 2026-03-16 03:01:19,022 | INFO     | . initial setup = 4 s
[2026-03-16 04:02:18] 2026-03-16 03:01:19,022 | INFO     | . payload setup = 4 s
[2026-03-16 04:02:18] 2026-03-16 03:01:19,022 | INFO     | . stage-in = 0 s
[2026-03-16 04:02:18] 2026-03-16 03:01:19,022 | INFO     | . payload execution = 1968 s
[2026-03-16 04:02:18] 2026-03-16 03:01:19,022 | INFO     | . stage-out = 0 s
[2026-03-16 04:02:18] 2026-03-16 03:01:19,022 | INFO     | . log creation = 0 s
[2026-03-16 04:02:18] 2026-03-16 03:01:19,022 | INFO     | ..............................
[2026-03-16 04:02:18] 2026-03-16 03:01:19,065 | INFO     | 
[2026-03-16 04:02:18] 2026-03-16 03:01:19,066 | INFO     | job summary report
[2026-03-16 04:02:18] 2026-03-16 03:01:19,066 | INFO     | --------------------------------------------------
[2026-03-16 04:02:18] 2026-03-16 03:01:19,066 | INFO     | PanDA job id: 7056111749
[2026-03-16 04:02:18] 2026-03-16 03:01:19,066 | INFO     | task id: 48967094
[2026-03-16 04:02:18] 2026-03-16 03:01:19,066 | INFO     | errors: (none)
[2026-03-16 04:02:18] 2026-03-16 03:01:19,066 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-16 04:02:18] 2026-03-16 03:01:19,066 | INFO     | pilot state: finished 
[2026-03-16 04:02:18] 2026-03-16 03:01:19,066 | INFO     | transexitcode: 0
[2026-03-16 04:02:18] 2026-03-16 03:01:19,066 | INFO     | exeerrorcode: 0
[2026-03-16 04:02:18] 2026-03-16 03:01:19,066 | INFO     | exeerrordiag: 
[2026-03-16 04:02:18] 2026-03-16 03:01:19,066 | INFO     | exitcode: 0
[2026-03-16 04:02:18] 2026-03-16 03:01:19,066 | INFO     | exitmsg: OK
[2026-03-16 04:02:18] 2026-03-16 03:01:19,066 | INFO     | cpuconsumptiontime: 19833 s
[2026-03-16 04:02:18] 2026-03-16 03:01:19,066 | INFO     | nevents: 400
[2026-03-16 04:02:18] 2026-03-16 03:01:19,066 | INFO     | neventsw: 0
[2026-03-16 04:02:18] 2026-03-16 03:01:19,066 | INFO     | pid: 1411428
[2026-03-16 04:02:18] 2026-03-16 03:01:19,066 | INFO     | pgrp: 1411428
[2026-03-16 04:02:18] 2026-03-16 03:01:19,066 | INFO     | corecount: 12
[2026-03-16 04:02:18] 2026-03-16 03:01:19,066 | INFO     | event service: False
[2026-03-16 04:02:18] 2026-03-16 03:01:19,066 | INFO     | sizes: {0: 2280238, 11: 2280238, 1976: 2305209, 1978: 2314457}
[2026-03-16 04:02:18] 2026-03-16 03:01:19,066 | INFO     | --------------------------------------------------
[2026-03-16 04:02:18] 2026-03-16 03:01:19,066 | INFO     | 
[2026-03-16 04:02:18] 2026-03-16 03:01:19,067 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot256/slots/0
[2026-03-16 04:02:18] 2026-03-16 03:01:19,081 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-16 04:02:18] 2026-03-16 03:01:19,082 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-16 04:02:18] 2026-03-16 03:01:19,082 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-16 04:02:18] 2026-03-16 03:01:19,082 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-16 04:02:18] 2026-03-16 03:01:19,082 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-16 04:02:18] 2026-03-16 03:01:19,082 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-16 04:02:18] 2026-03-16 03:01:19,082 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-16 04:02:18] 2026-03-16 03:01:19,082 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-16 04:02:18] 2026-03-16 03:01:19,082 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-16 04:02:18] 2026-03-16 03:01:19,082 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-16 04:02:18] 2026-03-16 03:01:19,082 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-16 04:02:18] 2026-03-16 03:01:19,082 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-16 04:02:18] 2026-03-16 03:01:19,082 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-16 04:02:18] 2026-03-16 03:01:19,082 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-16 04:02:18] 2026-03-16 03:01:19,082 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-16 04:02:18] 2026-03-16 03:01:19,082 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-16 04:02:18] 2026-03-16 03:01:19,082 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-16 04:02:18] 2026-03-16 03:01:19,082 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-16 04:02:18] 2026-03-16 03:01:19,082 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-16 04:02:18] 2026-03-16 03:01:19,082 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-16 04:02:18] 2026-03-16 03:01:19,082 | INFO     | job 7056111749 has completed (purged errors)
[2026-03-16 04:02:18] 2026-03-16 03:01:19,082 | INFO     | overall cleanup function is called
[2026-03-16 04:02:18] 2026-03-16 03:01:20,089 | INFO     | --- collectZombieJob: --- 10, [1411428]
[2026-03-16 04:02:18] 2026-03-16 03:01:20,090 | INFO     | zombie collector waiting for pid 1411428
[2026-03-16 04:02:18] 2026-03-16 03:01:20,090 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-16 04:02:18] 2026-03-16 03:01:20,090 | INFO     | collected zombie processes
[2026-03-16 04:02:18] 2026-03-16 03:01:20,090 | INFO     | will attempt to kill all subprocesses of pid=1411428
[2026-03-16 04:02:18] 2026-03-16 03:01:20,411 | INFO     | process IDs to be killed: [1411428] (in reverse order)
[2026-03-16 04:02:18] 2026-03-16 03:01:20,547 | WARNING  | found no corresponding commands to process id(s)
[2026-03-16 04:02:18] 2026-03-16 03:01:20,548 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-16 04:02:18] 2026-03-16 03:01:20,569 | INFO     | did not find any defunct processes belonging to 1411428
[2026-03-16 04:02:18] 2026-03-16 03:01:20,585 | INFO     | did not find any defunct processes belonging to 1411428
[2026-03-16 04:02:18] 2026-03-16 03:01:20,585 | INFO     | ready for new job
[2026-03-16 04:02:18] 2026-03-16 03:01:20,585 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-16 04:02:18] 2026-03-16 03:01:20,586 | INFO     | **************************************
[2026-03-16 04:02:18] 2026-03-16 03:01:20,586 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-16 04:02:18] 2026-03-16 03:01:20,586 | INFO     | **************************************
[2026-03-16 04:02:18] 2026-03-16 03:01:20,586 | INFO     | 
[2026-03-16 04:02:18] 2026-03-16 03:01:20,591 | INFO     | architecture information:
[2026-03-16 04:02:18] 2026-03-16 03:01:20,591 | INFO     | executing command: cat /etc/os-release
[2026-03-16 04:02:18] 2026-03-16 03:01:20,606 | INFO     | cat /etc/os-release:
[2026-03-16 04:02:18] NAME="CentOS Linux"
[2026-03-16 04:02:18] VERSION="7 (Core)"
[2026-03-16 04:02:18] ID="centos"
[2026-03-16 04:02:18] ID_LIKE="rhel fedora"
[2026-03-16 04:02:18] VERSION_ID="7"
[2026-03-16 04:02:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-16 04:02:18] ANSI_COLOR="0;31"
[2026-03-16 04:02:18] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-16 04:02:18] HOME_URL="https://www.centos.org/"
[2026-03-16 04:02:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-16 04:02:18] 
[2026-03-16 04:02:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-16 04:02:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-16 04:02:18] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-16 04:02:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-16 04:02:18] 
[2026-03-16 04:02:18] 2026-03-16 03:01:20,606 | INFO     | **************************************
[2026-03-16 04:02:18] 2026-03-16 03:01:21,109 | INFO     | executing command: df -mP /var/lib/boinc/var/slot256/slots/0
[2026-03-16 04:02:18] 2026-03-16 03:01:21,126 | INFO     | sufficient remaining disk space (265838133248 B)
[2026-03-16 04:02:18] 2026-03-16 03:01:21,126 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-16 04:02:18] 2026-03-16 03:01:21,126 | INFO     | current server update state: UPDATING_FINAL
[2026-03-16 04:02:18] 2026-03-16 03:01:21,126 | INFO     | update_server=False
[2026-03-16 04:02:18] 2026-03-16 03:01:21,126 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-16 04:02:18] 2026-03-16 03:01:21,127 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-16 04:02:18] 2026-03-16 03:01:21,878 | INFO     | all job control threads have been joined
[2026-03-16 04:02:18] 2026-03-16 03:01:21,878 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-16 04:02:18] 2026-03-16 03:01:21,927 | INFO     | all payload control threads have been joined
[2026-03-16 04:02:18] 2026-03-16 03:01:22,128 | INFO     | [job] retrieve thread has finished
[2026-03-16 04:02:18] 2026-03-16 03:01:22,129 | INFO     | all data control threads have been joined
[2026-03-16 04:02:18] 2026-03-16 03:01:22,323 | INFO     | [job] validate thread has finished
[2026-03-16 04:02:18] 2026-03-16 03:01:22,388 | INFO     | [job] create_data_payload thread has finished
[2026-03-16 04:02:18] 2026-03-16 03:01:22,435 | INFO     | [payload] validate_pre thread has finished
[2026-03-16 04:02:18] 2026-03-16 03:01:22,638 | INFO     | [data] copytool_in thread has finished
[2026-03-16 04:02:18] 2026-03-16 03:01:22,867 | INFO     | [payload] execute_payloads thread has finished
[2026-03-16 04:02:18] 2026-03-16 03:01:22,884 | INFO     | [job] control thread has finished
[2026-03-16 04:02:18] 2026-03-16 03:01:22,932 | INFO     | [payload] control thread has finished
[2026-03-16 04:02:18] 2026-03-16 03:01:23,134 | INFO     | [data] control thread has finished
[2026-03-16 04:02:18] 2026-03-16 03:01:23,212 | INFO     | [payload] validate_post thread has finished
[2026-03-16 04:02:18] 2026-03-16 03:01:23,274 | INFO     | [payload] failed_post thread has finished
[2026-03-16 04:02:18] 2026-03-16 03:01:23,604 | INFO     | job.realtimelogging is not enabled
[2026-03-16 04:02:18] 2026-03-16 03:01:23,682 | WARNING  | process 1411428 can no longer be monitored (due to stat problems) - aborting
[2026-03-16 04:02:18] 2026-03-16 03:01:23,884 | INFO     | [data] copytool_out thread has finished
[2026-03-16 04:02:18] 2026-03-16 03:01:23,930 | INFO     | using path: /var/lib/boinc/var/slot256/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-16 04:02:18] 2026-03-16 03:01:24,076 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-16 04:02:18] 2026-03-16 03:01:24,244 | INFO     | number of running child processes to parent process 1411428: 1
[2026-03-16 04:02:18] 2026-03-16 03:01:24,244 | INFO     | maximum number of monitored processes: 6
[2026-03-16 04:02:18] 2026-03-16 03:01:24,244 | INFO     | aborting job monitoring since job object (job id=7056111749) has expired
[2026-03-16 04:02:18] 2026-03-16 03:01:24,244 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-16 04:02:18] 2026-03-16 03:01:24,244 | INFO     | will abort loop
[2026-03-16 04:02:18] 2026-03-16 03:01:24,610 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-16 04:02:18] 2026-03-16 03:01:25,082 | INFO     | [job] queue monitor thread has finished
[2026-03-16 04:02:18] 2026-03-16 03:01:25,132 | INFO     | [data] queue_monitor thread has finished
[2026-03-16 04:02:18] 2026-03-16 03:01:25,250 | INFO     | [job] job monitor thread has finished
[2026-03-16 04:02:18] 2026-03-16 03:01:51,639 | INFO     | PID=1405642 has CPU usage=7.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-16 04:02:18] 2026-03-16 03:01:51,639 | INFO     | .. there are 10 such processes running
[2026-03-16 04:02:18] 2026-03-16 03:01:51,640 | INFO     | found 0 job(s) in 20 queues
[2026-03-16 04:02:18] 2026-03-16 03:01:51,640 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-16 04:02:18] 2026-03-16 03:01:51,640 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-16 04:02:18] 2026-03-16 03:02:12,522 | INFO     | [monitor] cgroup control has ended
[2026-03-16 04:02:18] 2026-03-16 03:02:12,856 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23108350867264)>', '<ExcThread(monitor, started 23108112365312)>']
[2026-03-16 04:02:18] 2026-03-16 03:02:13,750 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-16 04:02:18] 2026-03-16 03:02:13,750 | INFO     | [monitor] control thread has ended
[2026-03-16 04:02:18] 2026-03-16 03:02:17,882 | INFO     | all workflow threads have been joined
[2026-03-16 04:02:18] 2026-03-16 03:02:17,882 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-16 04:02:18] 2026-03-16 03:02:17,882 | INFO     | traces error code: 0
[2026-03-16 04:02:18] 2026-03-16 03:02:17,882 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-16 04:02:18] 2026-03-16 03:02:17,983 [wrapper] ==== pilot stdout END ====
[2026-03-16 04:02:18] 2026-03-16 03:02:17,985 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-16 04:02:18] 2026-03-16 03:02:17,988 [wrapper] pilotpid: 1405642
[2026-03-16 04:02:18] 2026-03-16 03:02:17,990 [wrapper] Pilot exit status: 0
[2026-03-16 04:02:18] 2026-03-16 03:02:17,999 [wrapper] pandaids: 7056111749
[2026-03-16 04:02:18] 2026-03-16 03:02:18,094 [wrapper] cleanup supervisor_pilot 1521740 1405643
[2026-03-16 04:02:18] 2026-03-16 03:02:18,097 [wrapper] Test setup, not cleaning
[2026-03-16 04:02:18] 2026-03-16 03:02:18,099 [wrapper] apfmon messages muted
[2026-03-16 04:02:18] 2026-03-16 03:02:18,102 [wrapper] ==== wrapper stdout END ====
[2026-03-16 04:02:18] 2026-03-16 03:02:18,104 [wrapper] ==== wrapper stderr END ====
[2026-03-16 04:02:18]  *** Error codes and diagnostics ***
[2026-03-16 04:02:18]     "exeErrorCode": 0,
[2026-03-16 04:02:18]     "exeErrorDiag": "",
[2026-03-16 04:02:18]     "pilotErrorCode": 0,
[2026-03-16 04:02:18]     "pilotErrorDiag": "",
[2026-03-16 04:02:18]  *** Listing of results directory ***
[2026-03-16 04:02:18] total 420352
[2026-03-16 04:02:18] -rw-r--r--. 1 boinc boinc    585013 Mar 15 19:43 pilot3.tar.gz
[2026-03-16 04:02:18] -rwx------. 1 boinc boinc     36322 Mar 15 19:56 runpilot2-wrapper.sh
[2026-03-16 04:02:18] -rw-r--r--. 1 boinc boinc      5111 Mar 15 19:56 queuedata.json
[2026-03-16 04:02:18] -rw-r--r--. 1 boinc boinc       100 Mar 16 03:27 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-16 04:02:18] -rwxr-xr-x. 1 boinc boinc      7986 Mar 16 03:27 run_atlas
[2026-03-16 04:02:18] -rw-r--r--. 1 boinc boinc       105 Mar 16 03:27 job.xml
[2026-03-16 04:02:18] -rw-r--r--. 1 boinc boinc      6709 Mar 16 03:27 init_data.xml
[2026-03-16 04:02:18] -rw-r--r--. 2 boinc boinc 217901173 Mar 16 03:27 EVNT.48967092._000366.pool.root.1
[2026-03-16 04:02:18] -rw-r--r--. 2 boinc boinc     15845 Mar 16 03:27 start_atlas.sh
[2026-03-16 04:02:18] drwxrwx--x. 2 boinc boinc      4096 Mar 16 03:27 shared
[2026-03-16 04:02:18] -rw-r--r--. 2 boinc boinc    597540 Mar 16 03:27 input.tar.gz
[2026-03-16 04:02:18] -rw-r--r--. 1 boinc boinc         0 Mar 16 03:27 boinc_lockfile
[2026-03-16 04:02:18] -rw-r--r--. 1 boinc boinc      2599 Mar 16 03:27 pandaJob.out
[2026-03-16 04:02:18] -rw-------. 1 boinc boinc   1006471 Mar 16 03:28 agis_schedconf.cvmfs.json
[2026-03-16 04:02:18] -rw-------. 1 boinc boinc   1511579 Mar 16 03:28 agis_ddmendpoints.agis.ALL.json
[2026-03-16 04:02:18] -rw-------. 1 boinc boinc       445 Mar 16 03:28 workernode_map.json
[2026-03-16 04:02:18] drwx------. 5 boinc boinc      4096 Mar 16 03:28 pilot3
[2026-03-16 04:02:18] -rw-------. 1 boinc boinc 207248462 Mar 16 04:00 HITS.48967094._010270.pool.root.1
[2026-03-16 04:02:18] -rw-r--r--. 1 boinc boinc       529 Mar 16 04:00 boinc_task_state.xml
[2026-03-16 04:02:18] -rw-------. 1 boinc boinc      1026 Mar 16 04:01 memory_monitor_summary.json
[2026-03-16 04:02:18] -rw-------. 1 boinc boinc    346908 Mar 16 04:01 log.48967094._010270.job.log.tgz.1
[2026-03-16 04:02:18] -rw-------. 1 boinc boinc      6358 Mar 16 04:01 heartbeat.json
[2026-03-16 04:02:18] -rw-------. 1 boinc boinc        95 Mar 16 04:01 pilot_heartbeat.json
[2026-03-16 04:02:18] -rw-r--r--. 1 boinc boinc        27 Mar 16 04:02 wrapper_checkpoint.txt
[2026-03-16 04:02:18] -rw-r--r--. 1 boinc boinc      8192 Mar 16 04:02 boinc_mmap_file
[2026-03-16 04:02:18] -rw-------. 1 boinc boinc      5436 Mar 16 04:02 pilotlog.txt
[2026-03-16 04:02:18] -rw-------. 1 boinc boinc    328873 Mar 16 04:02 log.48967094._010270.job.log.1
[2026-03-16 04:02:18] -rw-------. 1 boinc boinc       357 Mar 16 04:02 output.list
[2026-03-16 04:02:18] -rw-r--r--. 1 boinc boinc       620 Mar 16 04:02 runtime_log
[2026-03-16 04:02:18] -rw-------. 1 boinc boinc    696320 Mar 16 04:02 result.tar.gz
[2026-03-16 04:02:18] -rw-------. 1 boinc boinc       655 Mar 16 04:02 wiSMDmyo5L9n9Rq4apOajLDm4fhM0noT9bVooX4SDmqSsLDmRRRCQn.diag
[2026-03-16 04:02:18] -rw-r--r--. 1 boinc boinc      9223 Mar 16 04:02 runtime_log.err
[2026-03-16 04:02:18] -rw-r--r--. 1 boinc boinc     21287 Mar 16 04:02 stderr.txt
[2026-03-16 04:02:18] HITS file was successfully produced:
[2026-03-16 04:02:18] -rw-------. 1 boinc boinc 207248462 Mar 16 04:00 shared/HITS.pool.root.1
[2026-03-16 04:02:18]  *** Contents of shared directory: ***
[2026-03-16 04:02:18] total 416476
[2026-03-16 04:02:18] -rw-r--r--. 2 boinc boinc 217901173 Mar 16 03:27 ATLAS.root_0
[2026-03-16 04:02:18] -rw-r--r--. 2 boinc boinc     15845 Mar 16 03:27 start_atlas.sh
[2026-03-16 04:02:18] -rw-r--r--. 2 boinc boinc    597540 Mar 16 03:27 input.tar.gz
[2026-03-16 04:02:18] -rw-------. 1 boinc boinc 207248462 Mar 16 04:00 HITS.pool.root.1
[2026-03-16 04:02:18] -rw-------. 1 boinc boinc    696320 Mar 16 04:02 result.tar.gz
04:02:19 (1400887): run_atlas exited; CPU time 19890.922222
04:02:19 (1400887): called boinc_finish(0)

</stderr_txt>
]]>

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