Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
00:08:03 (3930577): wrapper (7.7.26015): starting
00:08:03 (3930577): wrapper: running run_atlas (--nthreads 3)
[2026-03-16 00:08:03] Arguments: --nthreads 3
[2026-03-16 00:08:03] Threads: 3
[2026-03-16 00:08:03] Checking for CVMFS
[2026-03-16 00:08:03] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-16 00:08:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-16 00:08:03] Running cvmfs_config stat atlas.cern.ch
[2026-03-16 00:08:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-16 00:08:03] 2.9.2.0 64072 26242 89712 157330 0 50 29855250 36864001 0 130560 0 10380893 99.982 984272 10547 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-03-16 00:08:03] CVMFS is ok
[2026-03-16 00:08:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-16 00:08:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-16 00:08:03] Further information can be found at the LHC@home message board.
[2026-03-16 00:08:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-16 00:08:03] Checking for apptainer binary...
[2026-03-16 00:08:03] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-16 00:08:03] Running /usr/bin/apptainer --version
[2026-03-16 00:08:03] apptainer version 1.4.1-1.1
[2026-03-16 00:08:03] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-16 00:08:03] thA383
[2026-03-16 00:08:03] apptainer works
[2026-03-16 00:08:03] Set ATHENA_PROC_NUMBER=3
[2026-03-16 00:08:03] Set ATHENA_CORE_NUMBER=3
[2026-03-16 00:08:03] Starting ATLAS job with PandaID=7056112086
[2026-03-16 00:08:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-16 01:54:31]  *** The last 200 lines of the pilot log: ***
[2026-03-16 01:54:31] 2026-03-16 00:54:01,194 | INFO     | did not find any defunct processes belonging to 3939057
[2026-03-16 01:54:31] 2026-03-16 00:54:01,194 | INFO     | ready for new job
[2026-03-16 01:54:31] 2026-03-16 00:54:01,194 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-16 01:54:31] 2026-03-16 00:54:01,195 | INFO     | **************************************
[2026-03-16 01:54:31] 2026-03-16 00:54:01,195 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-16 01:54:31] 2026-03-16 00:54:01,195 | INFO     | **************************************
[2026-03-16 01:54:31] 2026-03-16 00:54:01,195 | INFO     | 
[2026-03-16 01:54:31] 2026-03-16 00:54:01,196 | INFO     | architecture information:
[2026-03-16 01:54:31] 2026-03-16 00:54:01,196 | INFO     | executing command: cat /etc/os-release
[2026-03-16 01:54:31] 2026-03-16 00:54:01,206 | INFO     | cat /etc/os-release:
[2026-03-16 01:54:31] NAME="CentOS Linux"
[2026-03-16 01:54:31] VERSION="7 (Core)"
[2026-03-16 01:54:31] ID="centos"
[2026-03-16 01:54:31] ID_LIKE="rhel fedora"
[2026-03-16 01:54:31] VERSION_ID="7"
[2026-03-16 01:54:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-16 01:54:31] ANSI_COLOR="0;31"
[2026-03-16 01:54:31] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-16 01:54:31] HOME_URL="https://www.centos.org/"
[2026-03-16 01:54:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-16 01:54:31] 
[2026-03-16 01:54:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-16 01:54:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-16 01:54:31] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-16 01:54:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-16 01:54:31] 
[2026-03-16 01:54:31] 2026-03-16 00:54:01,206 | INFO     | **************************************
[2026-03-16 01:54:31] 2026-03-16 00:54:01,709 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-03-16 01:54:31] 2026-03-16 00:54:01,722 | INFO     | sufficient remaining disk space (231374585856 B)
[2026-03-16 01:54:31] 2026-03-16 00:54:01,722 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-16 01:54:31] 2026-03-16 00:54:01,722 | INFO     | current server update state: UPDATING_FINAL
[2026-03-16 01:54:31] 2026-03-16 00:54:01,722 | INFO     | update_server=False
[2026-03-16 01:54:31] 2026-03-16 00:54:01,722 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-16 01:54:31] 2026-03-16 00:54:01,722 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-16 01:54:31] 2026-03-16 00:54:01,722 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-16 01:54:31] 2026-03-16 00:54:02,088 | INFO     | all payload control threads have been joined
[2026-03-16 01:54:31] 2026-03-16 00:54:02,293 | INFO     | all data control threads have been joined
[2026-03-16 01:54:31] 2026-03-16 00:54:02,379 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-16 01:54:31] 2026-03-16 00:54:02,725 | INFO     | [job] queue monitor thread has finished
[2026-03-16 01:54:31] 2026-03-16 00:54:02,727 | INFO     | [job] retrieve thread has finished
[2026-03-16 01:54:31] 2026-03-16 00:54:02,750 | INFO     | [job] create_data_payload thread has finished
[2026-03-16 01:54:31] 2026-03-16 00:54:02,810 | INFO     | [payload] validate_pre thread has finished
[2026-03-16 01:54:31] 2026-03-16 00:54:02,926 | INFO     | [data] copytool_in thread has finished
[2026-03-16 01:54:31] 2026-03-16 00:54:03,049 | INFO     | [payload] execute_payloads thread has finished
[2026-03-16 01:54:31] 2026-03-16 00:54:03,094 | INFO     | [payload] control thread has finished
[2026-03-16 01:54:31] 2026-03-16 00:54:03,254 | WARNING  | process 3939057 can no longer be monitored (due to stat problems) - aborting
[2026-03-16 01:54:31] 2026-03-16 00:54:03,278 | INFO     | [payload] validate_post thread has finished
[2026-03-16 01:54:31] 2026-03-16 00:54:03,290 | INFO     | all job control threads have been joined
[2026-03-16 01:54:31] 2026-03-16 00:54:03,291 | INFO     | using path: /local/data/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-16 01:54:31] 2026-03-16 00:54:03,299 | INFO     | [data] control thread has finished
[2026-03-16 01:54:31] 2026-03-16 00:54:03,338 | INFO     | number of running child processes to parent process 3939057: 1
[2026-03-16 01:54:31] 2026-03-16 00:54:03,338 | INFO     | maximum number of monitored processes: 6
[2026-03-16 01:54:31] 2026-03-16 00:54:03,338 | INFO     | aborting job monitoring since job object (job id=7056112086) has expired
[2026-03-16 01:54:31] 2026-03-16 00:54:03,338 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-16 01:54:31] 2026-03-16 00:54:03,338 | INFO     | will abort loop
[2026-03-16 01:54:31] 2026-03-16 00:54:03,430 | INFO     | [payload] failed_post thread has finished
[2026-03-16 01:54:31] 2026-03-16 00:54:04,148 | INFO     | [job] validate thread has finished
[2026-03-16 01:54:31] 2026-03-16 00:54:04,296 | INFO     | [job] control thread has finished
[2026-03-16 01:54:31] 2026-03-16 00:54:04,344 | INFO     | [job] job monitor thread has finished
[2026-03-16 01:54:31] 2026-03-16 00:54:04,385 | INFO     | [data] copytool_out thread has finished
[2026-03-16 01:54:31] 2026-03-16 00:54:05,729 | INFO     | [data] queue_monitor thread has finished
[2026-03-16 01:54:31] 2026-03-16 00:54:12,579 | INFO     | job.realtimelogging is not enabled
[2026-03-16 01:54:31] 2026-03-16 00:54:13,584 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-16 01:54:31] 2026-03-16 00:54:22,376 | INFO     | [monitor] cgroup control has ended
[2026-03-16 01:54:31] 2026-03-16 00:54:23,118 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140099417917248)>', '<ExcThread(monitor, started 140098930726656)>']
[2026-03-16 01:54:31] 2026-03-16 00:54:28,144 | INFO     | all workflow threads have been joined
[2026-03-16 01:54:31] 2026-03-16 00:54:28,144 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-16 01:54:31] 2026-03-16 00:54:28,144 | INFO     | traces error code: 0
[2026-03-16 01:54:31] 2026-03-16 00:54:28,144 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-16 01:54:31] 2026-03-16 00:54:31,552 | INFO     | PID=3934629 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-16 01:54:31] 2026-03-16 00:54:31,553 | INFO     | found 0 job(s) in 20 queues
[2026-03-16 01:54:31] 2026-03-16 00:54:31,553 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-16 01:54:31] 2026-03-16 00:54:31,553 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-16 01:54:31] 2026-03-16 00:54:31,553 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-16 01:54:31] 2026-03-16 00:54:31,553 | INFO     | [monitor] control thread has ended
[2026-03-16 01:54:31] 2026-03-16 00:54:31,601 [wrapper] ==== pilot stdout END ====
[2026-03-16 01:54:31] 2026-03-16 00:54:31,604 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-16 01:54:31] 2026-03-16 00:54:31,606 [wrapper] pilotpid: 3934629
[2026-03-16 01:54:31] 2026-03-16 00:54:31,608 [wrapper] Pilot exit status: 0
[2026-03-16 01:54:31] 2026-03-16 00:54:31,616 [wrapper] pandaids: 7056112086
[2026-03-16 01:54:31] 2026-03-16 00:54:31,634 [wrapper] cleanup supervisor_pilot 3945285 3934630
[2026-03-16 01:54:31] 2026-03-16 00:54:31,636 [wrapper] Test setup, not cleaning
[2026-03-16 01:54:31] 2026-03-16 00:54:31,638 [wrapper] apfmon messages muted
[2026-03-16 01:54:31] 2026-03-16 00:54:31,641 [wrapper] ==== wrapper stdout END ====
[2026-03-16 01:54:31] 2026-03-16 00:54:31,643 [wrapper] ==== wrapper stderr END ====
[2026-03-16 01:54:31]  *** Error codes and diagnostics ***
[2026-03-16 01:54:31]     "exeErrorCode": 0,
[2026-03-16 01:54:31]     "exeErrorDiag": "",
[2026-03-16 01:54:31]     "pilotErrorCode": 0,
[2026-03-16 01:54:31]     "pilotErrorDiag": "",
[2026-03-16 01:54:31]  *** Listing of results directory ***
[2026-03-16 01:54:31] total 422756
[2026-03-16 01:54:31] -rw-r--r-- 1 boinc boinc    585013 Mar 15 19:43 pilot3.tar.gz
[2026-03-16 01:54:31] -rw-r--r-- 1 boinc boinc      5111 Mar 15 19:55 queuedata.json
[2026-03-16 01:54:31] -rwx------ 1 boinc boinc     36322 Mar 15 19:55 runpilot2-wrapper.sh
[2026-03-16 01:54:31] -rw-r--r-- 1 boinc boinc       100 Mar 16 00:08 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-16 01:54:31] -rwxr-xr-x 1 boinc boinc      7986 Mar 16 00:08 run_atlas
[2026-03-16 01:54:31] -rw-r--r-- 1 boinc boinc       105 Mar 16 00:08 job.xml
[2026-03-16 01:54:31] -rw-r--r-- 2 boinc boinc 217300172 Mar 16 00:08 EVNT.48967092._000372.pool.root.1
[2026-03-16 01:54:31] -rw-r--r-- 2 boinc boinc    597543 Mar 16 00:08 input.tar.gz
[2026-03-16 01:54:31] -rw-r--r-- 2 boinc boinc     15845 Mar 16 00:08 start_atlas.sh
[2026-03-16 01:54:31] drwxrwx--x 2 boinc boinc      4096 Mar 16 00:08 shared
[2026-03-16 01:54:31] -rw-r--r-- 1 boinc boinc         0 Mar 16 00:08 boinc_setup_complete
[2026-03-16 01:54:31] -rw-r--r-- 1 boinc boinc      6438 Mar 16 00:08 init_data.xml
[2026-03-16 01:54:31] -rw-r--r-- 1 boinc boinc         0 Mar 16 00:08 boinc_lockfile
[2026-03-16 01:54:31] -rw-r--r-- 1 boinc boinc      2599 Mar 16 00:08 pandaJob.out
[2026-03-16 01:54:31] -rw------- 1 boinc boinc   1006471 Mar 16 00:08 agis_schedconf.cvmfs.json
[2026-03-16 01:54:31] -rw------- 1 boinc boinc   1511579 Mar 16 00:08 agis_ddmendpoints.agis.ALL.json
[2026-03-16 01:54:31] -rw------- 1 boinc boinc       427 Mar 16 00:08 workernode_map.json
[2026-03-16 01:54:31] drwx------ 5 boinc boinc      4096 Mar 16 00:08 pilot3
[2026-03-16 01:54:31] -rw------- 1 boinc boinc 209296079 Mar 16 01:53 HITS.48967094._010425.pool.root.1
[2026-03-16 01:54:31] -rw------- 1 boinc boinc        95 Mar 16 01:53 pilot_heartbeat.json
[2026-03-16 01:54:31] -rw-r--r-- 1 boinc boinc       529 Mar 16 01:53 boinc_task_state.xml
[2026-03-16 01:54:31] -rw------- 1 boinc boinc      1016 Mar 16 01:53 memory_monitor_summary.json
[2026-03-16 01:54:31] -rw------- 1 boinc boinc    276277 Mar 16 01:53 log.48967094._010425.job.log.tgz.1
[2026-03-16 01:54:31] -rw------- 1 boinc boinc      6302 Mar 16 01:54 heartbeat.json
[2026-03-16 01:54:31] -rw-r--r-- 1 boinc boinc      8192 Mar 16 01:54 boinc_mmap_file
[2026-03-16 01:54:31] -rw-r--r-- 1 boinc boinc        27 Mar 16 01:54 wrapper_checkpoint.txt
[2026-03-16 01:54:31] -rw------- 1 boinc boinc       747 Mar 16 01:54 pilotlog.txt
[2026-03-16 01:54:31] -rw------- 1 boinc boinc    917789 Mar 16 01:54 log.48967094._010425.job.log.1
[2026-03-16 01:54:31] -rw------- 1 boinc boinc       357 Mar 16 01:54 output.list
[2026-03-16 01:54:31] -rw-r--r-- 1 boinc boinc       620 Mar 16 01:54 runtime_log
[2026-03-16 01:54:31] -rw------- 1 boinc boinc   1208320 Mar 16 01:54 result.tar.gz
[2026-03-16 01:54:31] -rw-r--r-- 1 boinc boinc      8896 Mar 16 01:54 runtime_log.err
[2026-03-16 01:54:31] -rw------- 1 boinc boinc       657 Mar 16 01:54 BhwKDmjn5L9n9Rq4apOajLDm4fhM0noT9bVooX4SDmyQsLDmezI6Qm.diag
[2026-03-16 01:54:31] -rw-r--r-- 1 boinc boinc     10366 Mar 16 01:54 stderr.txt
[2026-03-16 01:54:31] HITS file was successfully produced:
[2026-03-16 01:54:31] -rw------- 1 boinc boinc 209296079 Mar 16 01:53 shared/HITS.pool.root.1
[2026-03-16 01:54:31]  *** Contents of shared directory: ***
[2026-03-16 01:54:31] total 418388
[2026-03-16 01:54:31] -rw-r--r-- 2 boinc boinc 217300172 Mar 16 00:08 ATLAS.root_0
[2026-03-16 01:54:31] -rw-r--r-- 2 boinc boinc    597543 Mar 16 00:08 input.tar.gz
[2026-03-16 01:54:31] -rw-r--r-- 2 boinc boinc     15845 Mar 16 00:08 start_atlas.sh
[2026-03-16 01:54:31] -rw------- 1 boinc boinc 209296079 Mar 16 01:53 HITS.pool.root.1
[2026-03-16 01:54:31] -rw------- 1 boinc boinc   1208320 Mar 16 01:54 result.tar.gz
01:54:32 (3930577): run_atlas exited; CPU time 18069.942114
01:54:32 (3930577): called boinc_finish(0)

</stderr_txt>
]]>

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