Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
22:22:06 (3915594): wrapper (7.7.26015): starting
22:22:06 (3915594): wrapper: running run_atlas (--nthreads 3)
[2026-03-15 22:22:06] Arguments: --nthreads 3
[2026-03-15 22:22:06] Threads: 3
[2026-03-15 22:22:06] Checking for CVMFS
[2026-03-15 22:22:06] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-15 22:22:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-15 22:22:08] Running cvmfs_config stat atlas.cern.ch
[2026-03-15 22:22:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-15 22:22:08] 2.9.2.0 64072 26136 89564 157328 2 50 29845821 36864001 0 130560 0 10340577 99.982 980419 10693 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-03-15 22:22:08] CVMFS is ok
[2026-03-15 22:22:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-15 22:22:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-15 22:22:08] Further information can be found at the LHC@home message board.
[2026-03-15 22:22:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-15 22:22:08] Checking for apptainer binary...
[2026-03-15 22:22:08] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-15 22:22:08] Running /usr/bin/apptainer --version
[2026-03-15 22:22:08] apptainer version 1.4.1-1.1
[2026-03-15 22:22:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-15 22:22:08] thA383
[2026-03-15 22:22:08] apptainer works
[2026-03-15 22:22:08] Set ATHENA_PROC_NUMBER=3
[2026-03-15 22:22:08] Set ATHENA_CORE_NUMBER=3
[2026-03-15 22:22:08] Starting ATLAS job with PandaID=7056112149
[2026-03-15 22:22:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-16 00:07:41]  *** The last 200 lines of the pilot log: ***
[2026-03-16 00:07:41] 2026-03-15 23:07:09,969 | INFO     | will attempt to kill all subprocesses of pid=3924063
[2026-03-16 00:07:41] 2026-03-15 23:07:10,023 | INFO     | process IDs to be killed: [3924063] (in reverse order)
[2026-03-16 00:07:41] 2026-03-15 23:07:10,052 | WARNING  | found no corresponding commands to process id(s)
[2026-03-16 00:07:41] 2026-03-15 23:07:10,052 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-16 00:07:41] 2026-03-15 23:07:10,054 | INFO     | did not find any defunct processes belonging to 3924063
[2026-03-16 00:07:41] 2026-03-15 23:07:10,055 | INFO     | did not find any defunct processes belonging to 3924063
[2026-03-16 00:07:41] 2026-03-15 23:07:10,055 | INFO     | ready for new job
[2026-03-16 00:07:41] 2026-03-15 23:07:10,055 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-16 00:07:41] 2026-03-15 23:07:10,056 | INFO     | **************************************
[2026-03-16 00:07:41] 2026-03-15 23:07:10,056 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-16 00:07:41] 2026-03-15 23:07:10,056 | INFO     | **************************************
[2026-03-16 00:07:41] 2026-03-15 23:07:10,056 | INFO     | 
[2026-03-16 00:07:41] 2026-03-15 23:07:10,056 | INFO     | architecture information:
[2026-03-16 00:07:41] 2026-03-15 23:07:10,056 | INFO     | executing command: cat /etc/os-release
[2026-03-16 00:07:41] 2026-03-15 23:07:10,066 | INFO     | cat /etc/os-release:
[2026-03-16 00:07:41] NAME="CentOS Linux"
[2026-03-16 00:07:41] VERSION="7 (Core)"
[2026-03-16 00:07:41] ID="centos"
[2026-03-16 00:07:41] ID_LIKE="rhel fedora"
[2026-03-16 00:07:41] VERSION_ID="7"
[2026-03-16 00:07:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-16 00:07:41] ANSI_COLOR="0;31"
[2026-03-16 00:07:41] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-16 00:07:41] HOME_URL="https://www.centos.org/"
[2026-03-16 00:07:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-16 00:07:41] 
[2026-03-16 00:07:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-16 00:07:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-16 00:07:41] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-16 00:07:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-16 00:07:41] 
[2026-03-16 00:07:41] 2026-03-15 23:07:10,066 | INFO     | **************************************
[2026-03-16 00:07:41] 2026-03-15 23:07:10,569 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-03-16 00:07:41] 2026-03-15 23:07:10,584 | INFO     | sufficient remaining disk space (231180599296 B)
[2026-03-16 00:07:41] 2026-03-15 23:07:10,584 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-16 00:07:41] 2026-03-15 23:07:10,584 | INFO     | current server update state: UPDATING_FINAL
[2026-03-16 00:07:41] 2026-03-15 23:07:10,584 | INFO     | update_server=False
[2026-03-16 00:07:41] 2026-03-15 23:07:10,584 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-16 00:07:41] 2026-03-15 23:07:10,584 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-16 00:07:41] 2026-03-15 23:07:10,584 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-16 00:07:41] 2026-03-15 23:07:10,584 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-16 00:07:41] 2026-03-15 23:07:10,585 | INFO     | aborting loop
[2026-03-16 00:07:41] 2026-03-15 23:07:10,661 | INFO     | all data control threads have been joined
[2026-03-16 00:07:41] 2026-03-15 23:07:11,034 | INFO     | all job control threads have been joined
[2026-03-16 00:07:41] 2026-03-15 23:07:11,590 | INFO     | [job] retrieve thread has finished
[2026-03-16 00:07:41] 2026-03-15 23:07:11,590 | INFO     | [job] queue monitor thread has finished
[2026-03-16 00:07:41] 2026-03-15 23:07:11,590 | INFO     | [job] job monitor thread has finished
[2026-03-16 00:07:41] 2026-03-15 23:07:11,667 | INFO     | [data] control thread has finished
[2026-03-16 00:07:41] 2026-03-15 23:07:11,684 | INFO     | all payload control threads have been joined
[2026-03-16 00:07:41] 2026-03-15 23:07:12,039 | INFO     | [job] control thread has finished
[2026-03-16 00:07:41] 2026-03-15 23:07:12,055 | INFO     | [payload] validate_post thread has finished
[2026-03-16 00:07:41] 2026-03-15 23:07:12,590 | INFO     | [data] copytool_out thread has finished
[2026-03-16 00:07:41] 2026-03-15 23:07:12,640 | INFO     | [job] create_data_payload thread has finished
[2026-03-16 00:07:41] 2026-03-15 23:07:12,686 | INFO     | [payload] control thread has finished
[2026-03-16 00:07:41] 2026-03-15 23:07:12,784 | INFO     | [job] validate thread has finished
[2026-03-16 00:07:41] 2026-03-15 23:07:12,792 | INFO     | [data] copytool_in thread has finished
[2026-03-16 00:07:41] 2026-03-15 23:07:12,845 | INFO     | [payload] validate_pre thread has finished
[2026-03-16 00:07:41] 2026-03-15 23:07:13,024 | INFO     | [payload] execute_payloads thread has finished
[2026-03-16 00:07:41] 2026-03-15 23:07:13,111 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-16 00:07:41] 2026-03-15 23:07:13,111 | INFO     | [payload] failed_post thread has finished
[2026-03-16 00:07:41] 2026-03-15 23:07:15,578 [wrapper] supervise_pilot (15 min periods counter: 8)
[2026-03-16 00:07:41] 2026-03-15 23:07:17,118 | INFO     | [data] queue_monitor thread has finished
[2026-03-16 00:07:41] 2026-03-15 23:07:21,356 | INFO     | job.realtimelogging is not enabled
[2026-03-16 00:07:41] 2026-03-15 23:07:22,362 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-16 00:07:41] 2026-03-15 23:07:27,337 | INFO     | [monitor] cgroup control has ended
[2026-03-16 00:07:41] 2026-03-15 23:07:28,587 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140651186014016)>', '<ExcThread(monitor, started 140650683021056)>']
[2026-03-16 00:07:41] 2026-03-15 23:07:33,599 | INFO     | all workflow threads have been joined
[2026-03-16 00:07:41] 2026-03-15 23:07:33,599 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-16 00:07:41] 2026-03-15 23:07:33,600 | INFO     | traces error code: 0
[2026-03-16 00:07:41] 2026-03-15 23:07:33,600 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-16 00:07:41] 2026-03-15 23:07:40,904 | INFO     | PID=3919638 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-16 00:07:41] 2026-03-15 23:07:40,905 | INFO     | found 0 job(s) in 20 queues
[2026-03-16 00:07:41] 2026-03-15 23:07:40,905 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-16 00:07:41] 2026-03-15 23:07:40,905 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-16 00:07:41] 2026-03-15 23:07:40,905 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-16 00:07:41] 2026-03-15 23:07:40,905 | INFO     | [monitor] control thread has ended
[2026-03-16 00:07:41] 2026-03-15 23:07:40,953 [wrapper] ==== pilot stdout END ====
[2026-03-16 00:07:41] 2026-03-15 23:07:40,955 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-16 00:07:41] 2026-03-15 23:07:40,958 [wrapper] pilotpid: 3919638
[2026-03-16 00:07:41] 2026-03-15 23:07:40,960 [wrapper] Pilot exit status: 0
[2026-03-16 00:07:41] 2026-03-15 23:07:40,967 [wrapper] pandaids: 7056112149
[2026-03-16 00:07:41] 2026-03-15 23:07:40,985 [wrapper] cleanup supervisor_pilot 3930509 3919639
[2026-03-16 00:07:41] 2026-03-15 23:07:40,987 [wrapper] Test setup, not cleaning
[2026-03-16 00:07:41] 2026-03-15 23:07:40,990 [wrapper] apfmon messages muted
[2026-03-16 00:07:41] 2026-03-15 23:07:40,992 [wrapper] ==== wrapper stdout END ====
[2026-03-16 00:07:41] 2026-03-15 23:07:40,994 [wrapper] ==== wrapper stderr END ====
[2026-03-16 00:07:41]  *** Error codes and diagnostics ***
[2026-03-16 00:07:41]     "exeErrorCode": 0,
[2026-03-16 00:07:41]     "exeErrorDiag": "",
[2026-03-16 00:07:41]     "pilotErrorCode": 0,
[2026-03-16 00:07:41]     "pilotErrorDiag": "",
[2026-03-16 00:07:41]  *** Listing of results directory ***
[2026-03-16 00:07:41] total 417944
[2026-03-16 00:07:41] -rw-r--r-- 1 boinc boinc    585013 Mar 15 19:43 pilot3.tar.gz
[2026-03-16 00:07:41] -rw-r--r-- 1 boinc boinc      5111 Mar 15 19:55 queuedata.json
[2026-03-16 00:07:41] -rwx------ 1 boinc boinc     36322 Mar 15 19:55 runpilot2-wrapper.sh
[2026-03-16 00:07:41] -rw-r--r-- 1 boinc boinc       100 Mar 15 22:22 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-16 00:07:41] -rwxr-xr-x 1 boinc boinc      7986 Mar 15 22:22 run_atlas
[2026-03-16 00:07:41] -rw-r--r-- 1 boinc boinc       105 Mar 15 22:22 job.xml
[2026-03-16 00:07:41] -rw-r--r-- 2 boinc boinc 218790760 Mar 15 22:22 EVNT.48967092._000375.pool.root.1
[2026-03-16 00:07:41] -rw-r--r-- 2 boinc boinc    597539 Mar 15 22:22 input.tar.gz
[2026-03-16 00:07:41] -rw-r--r-- 2 boinc boinc     15845 Mar 15 22:22 start_atlas.sh
[2026-03-16 00:07:41] drwxrwx--x 2 boinc boinc      4096 Mar 15 22:22 shared
[2026-03-16 00:07:41] -rw-r--r-- 1 boinc boinc         0 Mar 15 22:22 boinc_setup_complete
[2026-03-16 00:07:41] -rw-r--r-- 1 boinc boinc      6438 Mar 15 22:22 init_data.xml
[2026-03-16 00:07:41] -rw-r--r-- 1 boinc boinc         0 Mar 15 22:22 boinc_lockfile
[2026-03-16 00:07:41] -rw-r--r-- 1 boinc boinc      2599 Mar 15 22:22 pandaJob.out
[2026-03-16 00:07:41] -rw------- 1 boinc boinc   1006457 Mar 15 22:22 agis_schedconf.cvmfs.json
[2026-03-16 00:07:41] -rw------- 1 boinc boinc   1511579 Mar 15 22:22 agis_ddmendpoints.agis.ALL.json
[2026-03-16 00:07:41] -rw------- 1 boinc boinc       427 Mar 15 22:22 workernode_map.json
[2026-03-16 00:07:41] drwx------ 5 boinc boinc      4096 Mar 15 22:22 pilot3
[2026-03-16 00:07:41] -rw------- 1 boinc boinc 202927721 Mar 16 00:06 HITS.48967094._010488.pool.root.1
[2026-03-16 00:07:41] -rw------- 1 boinc boinc        95 Mar 16 00:06 pilot_heartbeat.json
[2026-03-16 00:07:41] -rw-r--r-- 1 boinc boinc       529 Mar 16 00:06 boinc_task_state.xml
[2026-03-16 00:07:41] -rw------- 1 boinc boinc      1018 Mar 16 00:07 memory_monitor_summary.json
[2026-03-16 00:07:41] -rw------- 1 boinc boinc    261770 Mar 16 00:07 log.48967094._010488.job.log.tgz.1
[2026-03-16 00:07:41] -rw------- 1 boinc boinc      6313 Mar 16 00:07 heartbeat.json
[2026-03-16 00:07:41] -rw-r--r-- 1 boinc boinc      8192 Mar 16 00:07 boinc_mmap_file
[2026-03-16 00:07:41] -rw-r--r-- 1 boinc boinc        27 Mar 16 00:07 wrapper_checkpoint.txt
[2026-03-16 00:07:41] -rw------- 1 boinc boinc       747 Mar 16 00:07 pilotlog.txt
[2026-03-16 00:07:41] -rw------- 1 boinc boinc    909411 Mar 16 00:07 log.48967094._010488.job.log.1
[2026-03-16 00:07:41] -rw------- 1 boinc boinc       357 Mar 16 00:07 output.list
[2026-03-16 00:07:41] -rw-r--r-- 1 boinc boinc       620 Mar 16 00:07 runtime_log
[2026-03-16 00:07:41] -rw------- 1 boinc boinc   1187840 Mar 16 00:07 result.tar.gz
[2026-03-16 00:07:41] -rw-r--r-- 1 boinc boinc      8896 Mar 16 00:07 runtime_log.err
[2026-03-16 00:07:41] -rw------- 1 boinc boinc       657 Mar 16 00:07 PX8LDmmn5L9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDm5TvLDmaEXsan.diag
[2026-03-16 00:07:41] -rw-r--r-- 1 boinc boinc     10387 Mar 16 00:07 stderr.txt
[2026-03-16 00:07:41] HITS file was successfully produced:
[2026-03-16 00:07:41] -rw------- 1 boinc boinc 202927721 Mar 16 00:06 shared/HITS.pool.root.1
[2026-03-16 00:07:41]  *** Contents of shared directory: ***
[2026-03-16 00:07:41] total 413600
[2026-03-16 00:07:41] -rw-r--r-- 2 boinc boinc 218790760 Mar 15 22:22 ATLAS.root_0
[2026-03-16 00:07:41] -rw-r--r-- 2 boinc boinc    597539 Mar 15 22:22 input.tar.gz
[2026-03-16 00:07:41] -rw-r--r-- 2 boinc boinc     15845 Mar 15 22:22 start_atlas.sh
[2026-03-16 00:07:41] -rw------- 1 boinc boinc 202927721 Mar 16 00:06 HITS.pool.root.1
[2026-03-16 00:07:41] -rw------- 1 boinc boinc   1187840 Mar 16 00:07 result.tar.gz
00:07:42 (3915594): run_atlas exited; CPU time 17783.688222
00:07:42 (3915594): called boinc_finish(0)

</stderr_txt>
]]>

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