Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
2026-03-15 12:59:52 (1744): vboxwrapper version 26210
2026-03-15 12:59:52 (1744): BOINC client version: 8.2.8
2026-03-15 12:59:53 (1744): Detected: VirtualBox VboxManage Interface (Version: 7.2.4)
2026-03-15 12:59:54 (1744): Successfully copied 'init_data.xml' to the shared directory.
2026-03-15 12:59:54 (1744): Create VM. (boinc_5c955fe46b2e732d, slot#0)
2026-03-15 12:59:54 (1744): Setting Memory Size for VM. (4400MB)
2026-03-15 12:59:55 (1744): Setting CPU Count for VM. (4)
2026-03-15 12:59:55 (1744): Setting Chipset Options for VM.
2026-03-15 12:59:55 (1744): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-03-15 12:59:55 (1744): Setting Boot Options for VM.
2026-03-15 12:59:56 (1744): Setting Network Configuration for NAT. (Driver: virtio)
2026-03-15 12:59:56 (1744): Enabling VM Network Access.
2026-03-15 12:59:56 (1744): Disabling USB Support for VM.
2026-03-15 12:59:57 (1744): Disabling COM Port Support for VM.
2026-03-15 12:59:57 (1744): Disabling LPT Port Support for VM.
2026-03-15 12:59:57 (1744): Disabling Audio Support for VM.
2026-03-15 12:59:58 (1744): Disabling Clipboard Support for VM.
2026-03-15 12:59:58 (1744): Disabling Drag and Drop Support for VM.
2026-03-15 12:59:58 (1744): Adding storage controller(s) to VM.
2026-03-15 12:59:58 (1744): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-03-15 13:00:00 (1744): Adding VirtualBox Guest Additions to VM.
2026-03-15 13:00:01 (1744): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-03-15 13:00:01 (1744): forwarding host port 53849 to guest port 80
2026-03-15 13:00:01 (1744): Enabling remote desktop for VM.
2026-03-15 13:00:01 (1744): Required extension pack not installed, remote desktop not enabled.
2026-03-15 13:00:01 (1744): Enabling shared directory for VM.
2026-03-15 13:00:02 (1744): Starting VM using VBoxManage interface. (boinc_5c955fe46b2e732d, slot#0)
2026-03-15 13:00:07 (1744): Successfully started VM. (PID = '2012')
2026-03-15 13:00:07 (1744): Reporting VM Process ID to BOINC.
2026-03-15 13:00:07 (1744): Guest Log: BIOS: VirtualBox 7.2.4
2026-03-15 13:00:07 (1744): Guest Log: CPUID EDX: 0x178bfbff
2026-03-15 13:00:07 (1744): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-03-15 13:00:07 (1744): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-03-15 13:00:07 (1744): VM state change detected. (old = 'poweredoff', new = 'running')
2026-03-15 13:00:07 (1744): Detected: Web Application Enabled (http://localhost:53849)
2026-03-15 13:00:07 (1744): Preference change detected
2026-03-15 13:00:07 (1744): Setting CPU throttle for VM. (100%)
2026-03-15 13:00:07 (1744): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-03-15 13:00:09 (1744): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-03-15 13:00:09 (1744): Guest Log: BIOS: Booting from Hard Disk...
2026-03-15 13:00:12 (1744): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-03-15 13:00:12 (1744): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-03-15 13:00:12 (1744): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-03-15 13:00:12 (1744): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-03-15 13:00:12 (1744): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-03-15 13:00:12 (1744): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-03-15 13:00:12 (1744): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-03-15 13:00:12 (1744): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-03-15 13:00:12 (1744): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-03-15 13:00:12 (1744): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-03-15 13:00:12 (1744): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-03-15 13:00:12 (1744): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-03-15 13:00:12 (1744): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-03-15 13:00:12 (1744): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-03-15 13:00:12 (1744): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-03-15 13:00:12 (1744): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-03-15 13:00:12 (1744): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-03-15 13:00:12 (1744): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-03-15 13:00:12 (1744): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-03-15 13:00:12 (1744): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-03-15 13:00:12 (1744): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-03-15 13:00:12 (1744): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-03-15 13:00:12 (1744): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-03-15 13:00:12 (1744): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-03-15 13:00:12 (1744): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-03-15 13:00:12 (1744): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-03-15 13:00:12 (1744): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-03-15 13:00:12 (1744): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-03-15 13:00:12 (1744): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-03-15 13:00:12 (1744): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-03-15 13:00:12 (1744): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-03-15 13:00:12 (1744): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-03-15 13:00:46 (1744): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-03-15 13:00:46 (1744): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-03-15 13:00:51 (1744): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-03-15 13:00:51 (1744): Guest Log: 00:00:00.000118 main     Log opened 2026-03-15T13:00:50.388421000Z
2026-03-15 13:00:51 (1744): Guest Log: 00:00:00.000213 main     OS Product: Linux
2026-03-15 13:00:51 (1744): Guest Log: 00:00:00.000243 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-03-15 13:00:51 (1744): Guest Log: 00:00:00.000268 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-03-15 13:00:51 (1744): Guest Log: 00:00:00.000293 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-03-15 13:00:51 (1744): Guest Log: 00:00:00.000293 main     Process ID: 1307
2026-03-15 13:00:51 (1744): Guest Log: 00:00:00.000294 main     Package type: LINUX_64BITS_GENERIC
2026-03-15 13:00:51 (1744): Guest Log: 00:00:00.000971 main     5.2.32 r132073 started. Verbose level = 0
2026-03-15 13:00:51 (1744): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-03-15 13:00:51 (1744): Guest Log: [INFO] Mounting shared directory
2026-03-15 13:00:51 (1744): Guest Log: [INFO] Checking for init_data.xml
2026-03-15 13:01:00 (1744): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-03-15 13:01:00 (1744): Guest Log: [INFO] Detected branch: prod
2026-03-15 13:01:01 (1744): Guest Log: This is the prod version of the ATLAS job wrapper
2026-03-15 13:01:01 (1744): Guest Log: Copying input files
2026-03-15 13:01:01 (1744): Guest Log: 00:00:10.002625 timesync vgsvcTimeSyncWorker: Radical guest time change: 17 979 073 562 000ns (GuestNow=1 773 597 629 464 218 000 ns GuestLast=1 773 579 650 390 656 000 ns fSetTimeLastLoop=true )
2026-03-15 13:01:02 (1744): Guest Log: Copied input files into RunAtlas.
2026-03-15 13:01:02 (1744): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-03-15 13:01:02 (1744): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-03-15 13:01:02 (1744): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-03-15 13:01:02 (1744): Guest Log: Further information can be found at the LHC@home message board.
2026-03-15 13:01:10 (1744): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-03-15 13:01:10 (1744): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-03-15 13:01:10 (1744): Guest Log: 2.6.3.0 1589 0 30188 157323 4 1 3117743 4096001 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2026-03-15 13:01:11 (1744): Guest Log: copied the webapp to /var/www
2026-03-15 13:01:11 (1744): Guest Log: ATHENA_PROC_NUMBER=4
2026-03-15 13:01:11 (1744): Guest Log: ATHENA_CORE_NUMBER=4
2026-03-15 13:01:11 (1744): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-03-15 13:01:11 (1744): Guest Log:  *** Starting ATLAS job. (PandaID=7056055081 taskID=48967094) ***
2026-03-15 14:40:10 (1744): Status Report: Elapsed Time: '6000.000000'
2026-03-15 14:40:10 (1744): Status Report: CPU Time: '21975.500000'
2026-03-15 16:20:12 (1744): Status Report: Elapsed Time: '12000.000000'
2026-03-15 16:20:12 (1744): Status Report: CPU Time: '45813.375000'
2026-03-15 16:38:52 (1744): Guest Log:  *** Job finished ***
2026-03-15 16:38:52 (1744): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-03-15 16:38:52 (1744): Guest Log: 2026-03-15 21:37:49,313 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-03-15 16:38:52 (1744): Guest Log: 2026-03-15 21:37:49,313 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-03-15 16:38:52 (1744): Guest Log: 2026-03-15 21:38:14,564 | INFO     | [monitor] cgroup control has ended
2026-03-15 16:38:52 (1744): Guest Log: 2026-03-15 21:38:14,705 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140182355142464)>', '<ExcThread(monitor, started 140181617239808)>']
2026-03-15 16:38:52 (1744): Guest Log: 2026-03-15 21:38:15,524 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-03-15 16:38:52 (1744): Guest Log: 2026-03-15 21:38:15,524 | INFO     | [monitor] control thread has ended
2026-03-15 16:38:52 (1744): Guest Log: 2026-03-15 21:38:19,711 | INFO     | all workflow threads have been joined
2026-03-15 16:38:52 (1744): Guest Log: 2026-03-15 21:38:19,711 | INFO     | end of generic workflow (traces error code: 0)
2026-03-15 16:38:52 (1744): Guest Log: 2026-03-15 21:38:19,712 | INFO     | traces error code: 0
2026-03-15 16:38:52 (1744): Guest Log: 2026-03-15 21:38:19,712 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-03-15 16:38:52 (1744): Guest Log: 2026-03-15 21:38:19,811 [wrapper] ==== pilot stdout END ====
2026-03-15 16:38:52 (1744): Guest Log: 2026-03-15 21:38:19,817 [wrapper] ==== wrapper stdout RESUME ====
2026-03-15 16:38:52 (1744): Guest Log: 2026-03-15 21:38:19,822 [wrapper] pilotpid: 6016
2026-03-15 16:38:52 (1744): Guest Log: 2026-03-15 21:38:19,828 [wrapper] Pilot exit status: 0
2026-03-15 16:38:52 (1744): Guest Log: 2026-03-15 21:38:19,943 [wrapper] pandaids: 7056055081
2026-03-15 16:38:52 (1744): Guest Log: 2026-03-15 21:38:19,981 [wrapper] cleanup supervisor_pilot 27930 6017
2026-03-15 16:38:52 (1744): Guest Log: 2026-03-15 21:38:19,986 [wrapper] Test setup, not cleaning
2026-03-15 16:38:52 (1744): Guest Log: 2026-03-15 21:38:19,992 [wrapper] apfmon messages muted
2026-03-15 16:38:52 (1744): Guest Log: 2026-03-15 21:38:19,997 [wrapper] ==== wrapper stdout END ====
2026-03-15 16:38:52 (1744): Guest Log: 2026-03-15 21:38:20,003 [wrapper] ==== wrapper stderr END ====
2026-03-15 16:38:52 (1744): Guest Log:  *** Error codes and diagnostics ***
2026-03-15 16:38:52 (1744): Guest Log:     "exeErrorCode": 0,
2026-03-15 16:38:52 (1744): Guest Log:     "exeErrorDiag": "",
2026-03-15 16:38:52 (1744): Guest Log:     "pilotErrorCode": 0,
2026-03-15 16:38:52 (1744): Guest Log:     "pilotErrorDiag": "",
2026-03-15 16:38:52 (1744): Guest Log:  *** Listing of results directory ***
2026-03-15 16:38:52 (1744): Guest Log: total 210348
2026-03-15 16:38:52 (1744): Guest Log: -rw-r--r--. 1 atlas atlas    585013 Mar 15 17:37 pilot3.tar.gz
2026-03-15 16:38:52 (1744): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Mar 15 17:56 queuedata.json
2026-03-15 16:38:52 (1744): Guest Log: -rwx------. 1 atlas atlas     36322 Mar 15 17:56 runpilot2-wrapper.sh
2026-03-15 16:38:52 (1744): Guest Log: -rwxr-xr-x. 1 atlas atlas      8705 Mar 15 18:00 init_data.xml
2026-03-15 16:38:52 (1744): Guest Log: -rwxr-xr-x. 1 atlas atlas    597543 Mar 15 18:00 input.tar.gz
2026-03-15 16:38:52 (1744): Guest Log: -rwxr-xr-x. 1 atlas atlas     15845 Mar 15 18:00 start_atlas.sh
2026-03-15 16:38:52 (1744): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Mar 15 18:00 EVNT.48967092._000398.pool.root.1 -> /data/./ATLAS.root_0
2026-03-15 16:38:52 (1744): Guest Log: -rw-r--r--. 1 atlas atlas      2599 Mar 15 18:00 pandaJob.out
2026-03-15 16:38:52 (1744): Guest Log: -rw-------. 1 atlas atlas   1006473 Mar 15 18:01 agis_schedconf.cvmfs.json
2026-03-15 16:38:52 (1744): Guest Log: -rw-------. 1 atlas atlas       421 Mar 15 18:01 workernode_map.json
2026-03-15 16:38:52 (1744): Guest Log: drwx------. 5 atlas atlas      4096 Mar 15 18:02 pilot3
2026-03-15 16:38:52 (1744): Guest Log: -rw-------. 1 atlas atlas 207124044 Mar 15 21:36 HITS.48967094._009583.pool.root.1
2026-03-15 16:38:52 (1744): Guest Log: -rw-------. 1 atlas atlas        95 Mar 15 21:36 pilot_heartbeat.json
2026-03-15 16:38:52 (1744): Guest Log: -rw-------. 1 atlas atlas      1028 Mar 15 21:37 memory_monitor_summary.json
2026-03-15 16:38:52 (1744): Guest Log: -rw-------. 1 atlas atlas   1511579 Mar 15 21:37 agis_ddmendpoints.agis.ALL.json
2026-03-15 16:38:52 (1744): Guest Log: -rw-------. 1 atlas atlas    396034 Mar 15 21:37 log.48967094._009583.job.log.tgz.1
2026-03-15 16:38:52 (1744): Guest Log: -rw-------. 1 atlas atlas      6353 Mar 15 21:37 heartbeat.json
2026-03-15 16:38:52 (1744): Guest Log: -rw-------. 1 atlas atlas      4801 Mar 15 21:38 pilotlog.txt
2026-03-15 16:38:52 (1744): Guest Log: -rw-------. 1 atlas atlas   1803992 Mar 15 21:38 log.48967094._009583.job.log.1
2026-03-15 16:38:52 (1744): Guest Log: -rw-------. 1 atlas atlas       357 Mar 15 21:38 output.list
2026-03-15 16:38:52 (1744): Guest Log: -rw-r--r--. 1 atlas atlas       620 Mar 15 21:38 runtime_log
2026-03-15 16:38:52 (1744): Guest Log: -rw-------. 1 atlas atlas   2222080 Mar 15 21:38 result.tar.gz
2026-03-15 16:38:52 (1744): Guest Log: -rw-r--r--. 1 atlas atlas      8758 Mar 15 21:38 runtime_log.err
2026-03-15 16:38:52 (1744): Guest Log: -rw-------. 1 atlas atlas       660 Mar 15 21:38 gxsMDmDs4L9n9Rq4apOajLDm4fhM0noT9bVooX4SDmlMsLDmGX09fm.diag
2026-03-15 16:38:52 (1744): Guest Log: Looking for outputfile HITS.48967094._009583.pool.root.1
2026-03-15 16:38:52 (1744): Guest Log: HITS file was successfully produced
2026-03-15 16:38:52 (1744): Guest Log: -rw-------. 1 atlas atlas 207124044 Mar 15 21:36 /home/atlas/RunAtlas/HITS.48967094._009583.pool.root.1
2026-03-15 16:38:53 (1744): Guest Log: Successfully finished the ATLAS job!
2026-03-15 16:38:53 (1744): Guest Log: Copying the results back to the shared directory!
2026-03-15 16:38:53 (1744): Guest Log:  *** Contents of shared directory: ***
2026-03-15 16:38:53 (1744): Guest Log: total 418416
2026-03-15 16:38:53 (1744): Guest Log: -rwxrwxrwx. 1 root root 218480089 Mar 15 17:59 ATLAS.root_0
2026-03-15 16:38:53 (1744): Guest Log: -rwxrwxrwx. 1 root root 207124044 Mar 15  2026 HITS.pool.root.1
2026-03-15 16:38:53 (1744): Guest Log: -rwxrwxrwx. 1 root root      8705 Mar 15 17:59 init_data.xml
2026-03-15 16:38:53 (1744): Guest Log: -rwxrwxrwx. 1 root root    597543 Mar 15 17:59 input.tar.gz
2026-03-15 16:38:53 (1744): Guest Log: -rwxrwxrwx. 1 root root   2222080 Mar 15  2026 result.tar.gz
2026-03-15 16:38:53 (1744): Guest Log: -rwxrwxrwx. 1 root root     15845 Mar 15 17:59 start_atlas.sh
2026-03-15 16:38:53 (1744): Guest Log:  *** Success! Shutting down the machine. ***
2026-03-15 16:38:53 (1744): VM Completion File Detected.
2026-03-15 16:38:53 (1744): Powering off VM.
2026-03-15 16:38:54 (1744): Successfully stopped VM.
2026-03-15 16:38:54 (1744): Deregistering VM. (boinc_5c955fe46b2e732d, slot#0)
2026-03-15 16:38:54 (1744): Removing network bandwidth throttle group from VM.
2026-03-15 16:38:54 (1744): Removing VM from VirtualBox.
2026-03-15 16:38:59 (1744): called boinc_finish(0)

</stderr_txt>
]]>

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