Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
13:30:12 (9252): wrapper (7.7.26015): starting
13:30:12 (9252): wrapper: running run_atlas (--nthreads 8)
[2026-03-15 13:30:12] Arguments: --nthreads 8
[2026-03-15 13:30:12] Threads: 8
[2026-03-15 13:30:12] Checking for CVMFS
[2026-03-15 13:30:12] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-15 13:30:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-15 13:30:12] Running cvmfs_config stat atlas.cern.ch
[2026-03-15 13:30:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-15 13:30:12] 2.11.2.0 2991 125372 93116 157323 2 1 13217516 20275201 1 130560 0 34745967 99.906 6672698 26432 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-15 13:30:12] CVMFS is ok
[2026-03-15 13:30:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-15 13:30:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-15 13:30:12] Further information can be found at the LHC@home message board.
[2026-03-15 13:30:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-15 13:30:12] Checking for apptainer binary...
[2026-03-15 13:30:12] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-15 13:30:12] Running /usr/bin/apptainer --version
[2026-03-15 13:30:12] apptainer version 1.3.2-1.el7
[2026-03-15 13:30:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-15 13:30:14] c-115-4.aglt2.org
[2026-03-15 13:30:14] apptainer works
[2026-03-15 13:30:14] Set ATHENA_PROC_NUMBER=8
[2026-03-15 13:30:14] Set ATHENA_CORE_NUMBER=8
[2026-03-15 13:30:14] Starting ATLAS job with PandaID=7056043613
[2026-03-15 13:30:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
05:11:30 (29045): wrapper (7.7.26015): starting
05:11:30 (29045): wrapper: running run_atlas (--nthreads 8)
[2026-03-16 05:11:30] Arguments: --nthreads 8
[2026-03-16 05:11:30] Threads: 8
[2026-03-16 05:11:30] This job has been restarted, cleaning up previous attempt
[2026-03-16 05:11:30] Checking for CVMFS
[2026-03-16 05:11:30] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-16 05:11:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-16 05:11:30] Running cvmfs_config stat atlas.cern.ch
[2026-03-16 05:11:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-16 05:11:30] 2.11.2.0 2991 126313 93916 157346 2 50 15401872 20275200 1 130560 0 34855976 99.892 6984509 26829 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-16 05:11:30] CVMFS is ok
[2026-03-16 05:11:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-16 05:11:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-16 05:11:30] Further information can be found at the LHC@home message board.
[2026-03-16 05:11:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-16 05:11:30] Checking for apptainer binary...
[2026-03-16 05:11:30] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-16 05:11:30] Running /usr/bin/apptainer --version
[2026-03-16 05:11:30] apptainer version 1.3.2-1.el7
[2026-03-16 05:11:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-16 05:11:32] c-115-4.aglt2.org
[2026-03-16 05:11:32] apptainer works
[2026-03-16 05:11:32] Set ATHENA_PROC_NUMBER=8
[2026-03-16 05:11:32] Set ATHENA_CORE_NUMBER=8
[2026-03-16 05:11:32] Starting ATLAS job with PandaID=7056043613
[2026-03-16 05:11:32] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-17 20:23:52]  *** The last 200 lines of the pilot log: ***
[2026-03-17 20:23:52] 2026-03-18 00:23:16,828 | INFO     | extracted standard info from prmon json
[2026-03-17 20:23:52] 2026-03-18 00:23:16,828 | INFO     | extracted standard memory fields from prmon json
[2026-03-17 20:23:52] 2026-03-18 00:23:16,828 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-17 20:23:52] 2026-03-18 00:23:16,860 | INFO     | fitting pss+swap vs Time
[2026-03-17 20:23:52] 2026-03-18 00:23:16,863 | INFO     | sum of square deviations: 3837124039537.9707
[2026-03-17 20:23:52] 2026-03-18 00:23:16,966 | INFO     | sum of deviations: 7407858182533.562
[2026-03-17 20:23:52] 2026-03-18 00:23:16,967 | INFO     | mean x: 1773722854.572849
[2026-03-17 20:23:52] 2026-03-18 00:23:16,967 | INFO     | mean y: 3367992.607868569
[2026-03-17 20:23:52] 2026-03-18 00:23:16,967 | INFO     | intersect: -3420938135.2118607
[2026-03-17 20:23:52] 2026-03-18 00:23:16,969 | INFO     | chi2: 9.99164173400023
[2026-03-17 20:23:52] 2026-03-18 00:23:16,971 | INFO     | sum of square deviations: 3812294154846.3286
[2026-03-17 20:23:52] 2026-03-18 00:23:17,070 | INFO     | time since job start (141086s) is within the limit (345600.0s)
[2026-03-17 20:23:52] 2026-03-18 00:23:17,076 | INFO     | sum of deviations: 8335004685480.839
[2026-03-17 20:23:52] 2026-03-18 00:23:17,076 | INFO     | mean x: 1773722702.07409
[2026-03-17 20:23:52] 2026-03-18 00:23:17,077 | INFO     | mean y: 3373686.4337088387
[2026-03-17 20:23:52] 2026-03-18 00:23:17,077 | INFO     | intersect: -3874602784.4368105
[2026-03-17 20:23:52] 2026-03-18 00:23:17,079 | INFO     | chi2: 6.786951878241955
[2026-03-17 20:23:52] 2026-03-18 00:23:17,079 | INFO     | current chi2=6.786951878241955 (change=32.07370661473121 %)
[2026-03-17 20:23:52] 2026-03-18 00:23:17,081 | INFO     | sum of square deviations: 3787571621004.678
[2026-03-17 20:23:52] 2026-03-18 00:23:17,186 | INFO     | sum of deviations: 9073652351035.488
[2026-03-17 20:23:52] 2026-03-18 00:23:17,186 | INFO     | mean x: 1773722549.5753365
[2026-03-17 20:23:52] 2026-03-18 00:23:17,186 | INFO     | mean y: 3378241.023013461
[2026-03-17 20:23:52] 2026-03-18 00:23:17,186 | INFO     | intersect: -4245819765.6327224
[2026-03-17 20:23:52] 2026-03-18 00:23:17,188 | INFO     | chi2: 4.515119523387307
[2026-03-17 20:23:52] 2026-03-18 00:23:17,188 | INFO     | current chi2=4.515119523387307 (change=33.4735297319233 %)
[2026-03-17 20:23:52] 2026-03-18 00:23:17,190 | INFO     | sum of square deviations: 3762956205450.5244
[2026-03-17 20:23:52] 2026-03-18 00:23:17,294 | INFO     | sum of deviations: 9519554359246.74
[2026-03-17 20:23:52] 2026-03-18 00:23:17,294 | INFO     | mean x: 1773722397.0765884
[2026-03-17 20:23:52] 2026-03-18 00:23:17,294 | INFO     | mean y: 3381002.9617058313
[2026-03-17 20:23:52] 2026-03-18 00:23:17,294 | INFO     | intersect: -4483794997.844934
[2026-03-17 20:23:52] 2026-03-18 00:23:17,296 | INFO     | chi2: 3.670331331953286
[2026-03-17 20:23:52] 2026-03-18 00:23:17,296 | INFO     | current chi2=3.670331331953286 (change=18.710206608223935 %)
[2026-03-17 20:23:52] 2026-03-18 00:23:17,296 | INFO     | right removable region: 2297
[2026-03-17 20:23:52] 2026-03-18 00:23:17,298 | INFO     | sum of square deviations: 3812293346596.3286
[2026-03-17 20:23:52] 2026-03-18 00:23:17,402 | INFO     | sum of deviations: 6546043700246.29
[2026-03-17 20:23:52] 2026-03-18 00:23:17,402 | INFO     | mean x: 1773723007.07409
[2026-03-17 20:23:52] 2026-03-18 00:23:17,403 | INFO     | mean y: 3373284.185441941
[2026-03-17 20:23:52] 2026-03-18 00:23:17,403 | INFO     | intersect: -3042265458.9101295
[2026-03-17 20:23:52] 2026-03-18 00:23:17,405 | INFO     | chi2: 7.3229164870759975
[2026-03-17 20:23:52] 2026-03-18 00:23:17,405 | INFO     | current chi2=7.3229164870759975 (change=26.709577044210015 %)
[2026-03-17 20:23:52] 2026-03-18 00:23:17,407 | INFO     | sum of square deviations: 3787570004504.685
[2026-03-17 20:23:52] 2026-03-18 00:23:17,510 | INFO     | sum of deviations: 6316332169858.068
[2026-03-17 20:23:52] 2026-03-18 00:23:17,510 | INFO     | mean x: 1773723159.5753365
[2026-03-17 20:23:52] 2026-03-18 00:23:17,510 | INFO     | mean y: 3374701.0082501085
[2026-03-17 20:23:52] 2026-03-18 00:23:17,511 | INFO     | intersect: -2954570535.6272135
[2026-03-17 20:23:52] 2026-03-18 00:23:17,512 | INFO     | chi2: 7.196570969261355
[2026-03-17 20:23:52] 2026-03-18 00:23:17,512 | INFO     | current chi2=7.196570969261355 (change=1.7253442400664536 %)
[2026-03-17 20:23:52] 2026-03-18 00:23:17,513 | INFO     | left removable region: 20
[2026-03-17 20:23:52] 2026-03-18 00:23:17,515 | INFO     | sum of square deviations: 3660732710351.9766
[2026-03-17 20:23:52] 2026-03-18 00:23:17,616 | INFO     | sum of deviations: 8176652130563.718
[2026-03-17 20:23:52] 2026-03-18 00:23:17,616 | INFO     | mean x: 1773722976.581906
[2026-03-17 20:23:52] 2026-03-18 00:23:17,616 | INFO     | mean y: 3390091.5081247254
[2026-03-17 20:23:52] 2026-03-18 00:23:17,616 | INFO     | intersect: -3958416711.3993177
[2026-03-17 20:23:52] 2026-03-18 00:23:17,618 | INFO     | chi2: 0.7064438225927075
[2026-03-17 20:23:52] 2026-03-18 00:23:17,618 | INFO     | current memory leak: 2.23 B/s (using 2277 data points, chi2=0.71)
[2026-03-17 20:23:52] 2026-03-18 00:23:17,619 | INFO     | could have reported an average CPU frequency of 1762 MHz (82 samples)
[2026-03-17 20:23:52] 2026-03-18 00:23:17,619 | INFO     | ..............................
[2026-03-17 20:23:52] 2026-03-18 00:23:17,619 | INFO     | . Timing measurements:
[2026-03-17 20:23:52] 2026-03-18 00:23:17,619 | INFO     | . get job = 0 s
[2026-03-17 20:23:52] 2026-03-18 00:23:17,620 | INFO     | . initial setup = 2 s
[2026-03-17 20:23:52] 2026-03-18 00:23:17,620 | INFO     | . payload setup = 9 s
[2026-03-17 20:23:52] 2026-03-18 00:23:17,620 | INFO     | . stage-in = 0 s
[2026-03-17 20:23:52] 2026-03-18 00:23:17,620 | INFO     | . payload execution = 141050 s
[2026-03-17 20:23:52] 2026-03-18 00:23:17,620 | INFO     | . stage-out = 5 s
[2026-03-17 20:23:52] 2026-03-18 00:23:17,620 | INFO     | . log creation = 1 s
[2026-03-17 20:23:52] 2026-03-18 00:23:17,620 | INFO     | ..............................
[2026-03-17 20:23:52] 2026-03-18 00:23:17,696 | INFO     | 
[2026-03-17 20:23:52] 2026-03-18 00:23:17,697 | INFO     | job summary report
[2026-03-17 20:23:52] 2026-03-18 00:23:17,697 | INFO     | --------------------------------------------------
[2026-03-17 20:23:52] 2026-03-18 00:23:17,697 | INFO     | PanDA job id: 7056043613
[2026-03-17 20:23:52] 2026-03-18 00:23:17,697 | INFO     | task id: 49151576
[2026-03-17 20:23:52] 2026-03-18 00:23:17,697 | INFO     | errors: (none)
[2026-03-17 20:23:52] 2026-03-18 00:23:17,697 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-17 20:23:52] 2026-03-18 00:23:17,697 | INFO     | pilot state: finished 
[2026-03-17 20:23:52] 2026-03-18 00:23:17,698 | INFO     | transexitcode: 0
[2026-03-17 20:23:52] 2026-03-18 00:23:17,698 | INFO     | exeerrorcode: 0
[2026-03-17 20:23:52] 2026-03-18 00:23:17,698 | INFO     | exeerrordiag: 
[2026-03-17 20:23:52] 2026-03-18 00:23:17,698 | INFO     | exitcode: 0
[2026-03-17 20:23:52] 2026-03-18 00:23:17,698 | INFO     | exitmsg: OK
[2026-03-17 20:23:52] 2026-03-18 00:23:17,698 | INFO     | cpuconsumptiontime: 1090655 s
[2026-03-17 20:23:52] 2026-03-18 00:23:17,698 | INFO     | nevents: 2050
[2026-03-17 20:23:52] 2026-03-18 00:23:17,698 | INFO     | neventsw: 0
[2026-03-17 20:23:52] 2026-03-18 00:23:17,698 | INFO     | pid: 2878
[2026-03-17 20:23:52] 2026-03-18 00:23:17,698 | INFO     | pgrp: 2878
[2026-03-17 20:23:52] 2026-03-18 00:23:17,699 | INFO     | corecount: 8
[2026-03-17 20:23:52] 2026-03-18 00:23:17,699 | INFO     | event service: False
[2026-03-17 20:23:52] 2026-03-18 00:23:17,699 | INFO     | sizes: {0: 2280493, 1: 2280954, 11: 2280954, 141063: 2374687, 141064: 2374686, 141070: 2383740, 141073: 2383924, 141076: 2384170}
[2026-03-17 20:23:52] 2026-03-18 00:23:17,699 | INFO     | --------------------------------------------------
[2026-03-17 20:23:52] 2026-03-18 00:23:17,699 | INFO     | 
[2026-03-17 20:23:52] 2026-03-18 00:23:17,699 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-03-17 20:23:52] 2026-03-18 00:23:17,727 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-17 20:23:52] 2026-03-18 00:23:17,728 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-17 20:23:52] 2026-03-18 00:23:17,728 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-17 20:23:52] 2026-03-18 00:23:17,728 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-17 20:23:52] 2026-03-18 00:23:17,728 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-17 20:23:52] 2026-03-18 00:23:17,729 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-17 20:23:52] 2026-03-18 00:23:17,729 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-17 20:23:52] 2026-03-18 00:23:17,729 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-17 20:23:52] 2026-03-18 00:23:17,729 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-17 20:23:52] 2026-03-18 00:23:17,729 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-17 20:23:52] 2026-03-18 00:23:17,730 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-17 20:23:52] 2026-03-18 00:23:17,730 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-17 20:23:52] 2026-03-18 00:23:17,730 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-17 20:23:52] 2026-03-18 00:23:17,730 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-17 20:23:52] 2026-03-18 00:23:17,730 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-17 20:23:52] 2026-03-18 00:23:17,730 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-17 20:23:52] 2026-03-18 00:23:17,731 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-17 20:23:52] 2026-03-18 00:23:17,731 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-17 20:23:52] 2026-03-18 00:23:17,731 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-17 20:23:52] 2026-03-18 00:23:17,731 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-17 20:23:52] 2026-03-18 00:23:17,732 | INFO     | job 7056043613 has completed (purged errors)
[2026-03-17 20:23:52] 2026-03-18 00:23:17,732 | INFO     | overall cleanup function is called
[2026-03-17 20:23:52] 2026-03-18 00:23:18,747 | INFO     | --- collectZombieJob: --- 10, [2878]
[2026-03-17 20:23:52] 2026-03-18 00:23:18,748 | INFO     | zombie collector waiting for pid 2878
[2026-03-17 20:23:52] 2026-03-18 00:23:18,748 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-17 20:23:52] 2026-03-18 00:23:18,748 | INFO     | collected zombie processes
[2026-03-17 20:23:52] 2026-03-18 00:23:18,748 | INFO     | will attempt to kill all subprocesses of pid=2878
[2026-03-17 20:23:52] 2026-03-18 00:23:18,830 | INFO     | process IDs to be killed: [2878] (in reverse order)
[2026-03-17 20:23:52] 2026-03-18 00:23:18,908 | WARNING  | found no corresponding commands to process id(s)
[2026-03-17 20:23:52] 2026-03-18 00:23:18,909 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-17 20:23:52] 2026-03-18 00:23:18,913 | INFO     | did not find any defunct processes belonging to 2878
[2026-03-17 20:23:52] 2026-03-18 00:23:18,916 | INFO     | did not find any defunct processes belonging to 2878
[2026-03-17 20:23:52] 2026-03-18 00:23:18,916 | INFO     | ready for new job
[2026-03-17 20:23:52] 2026-03-18 00:23:18,916 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-17 20:23:52] 2026-03-18 00:23:18,924 | INFO     | **************************************
[2026-03-17 20:23:52] 2026-03-18 00:23:18,924 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-17 20:23:52] 2026-03-18 00:23:18,924 | INFO     | **************************************
[2026-03-17 20:23:52] 2026-03-18 00:23:18,924 | INFO     | 
[2026-03-17 20:23:52] 2026-03-18 00:23:18,924 | INFO     | architecture information:
[2026-03-17 20:23:52] 2026-03-18 00:23:18,925 | INFO     | executing command: cat /etc/os-release
[2026-03-17 20:23:52] 2026-03-18 00:23:18,945 | INFO     | cat /etc/os-release:
[2026-03-17 20:23:52] NAME="CentOS Linux"
[2026-03-17 20:23:52] VERSION="7 (Core)"
[2026-03-17 20:23:52] ID="centos"
[2026-03-17 20:23:52] ID_LIKE="rhel fedora"
[2026-03-17 20:23:52] VERSION_ID="7"
[2026-03-17 20:23:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-17 20:23:52] ANSI_COLOR="0;31"
[2026-03-17 20:23:52] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-17 20:23:52] HOME_URL="https://www.centos.org/"
[2026-03-17 20:23:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-17 20:23:52] 
[2026-03-17 20:23:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-17 20:23:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-17 20:23:52] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-17 20:23:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-17 20:23:52] 
[2026-03-17 20:23:52] 2026-03-18 00:23:18,946 | INFO     | **************************************
[2026-03-17 20:23:52] 2026-03-18 00:23:19,449 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-03-17 20:23:52] 2026-03-18 00:23:19,469 | INFO     | sufficient remaining disk space (16315842560 B)
[2026-03-17 20:23:52] 2026-03-18 00:23:19,469 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-17 20:23:52] 2026-03-18 00:23:19,470 | INFO     | current server update state: UPDATING_FINAL
[2026-03-17 20:23:52] 2026-03-18 00:23:19,470 | INFO     | update_server=False
[2026-03-17 20:23:52] 2026-03-18 00:23:19,470 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-17 20:23:52] 2026-03-18 00:23:19,470 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-17 20:23:52] 2026-03-18 00:23:19,471 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-17 20:23:52] 2026-03-18 00:23:19,471 | INFO     | aborting loop
[2026-03-17 20:23:52] 2026-03-18 00:23:19,900 | INFO     | all data control threads have been joined
[2026-03-17 20:23:52] 2026-03-18 00:23:20,033 | INFO     | all payload control threads have been joined
[2026-03-17 20:23:52] 2026-03-18 00:23:20,268 | INFO     | all job control threads have been joined
[2026-03-17 20:23:52] 2026-03-18 00:23:20,476 | INFO     | [job] retrieve thread has finished
[2026-03-17 20:23:52] 2026-03-18 00:23:20,476 | INFO     | [job] queue monitor thread has finished
[2026-03-17 20:23:52] 2026-03-18 00:23:20,477 | INFO     | [job] job monitor thread has finished
[2026-03-17 20:23:52] 2026-03-18 00:23:20,513 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-17 20:23:52] 2026-03-18 00:23:20,551 | INFO     | [payload] validate_pre thread has finished
[2026-03-17 20:23:52] 2026-03-18 00:23:20,791 | INFO     | [job] create_data_payload thread has finished
[2026-03-17 20:23:52] 2026-03-18 00:23:20,906 | INFO     | [data] control thread has finished
[2026-03-17 20:23:52] 2026-03-18 00:23:21,020 | INFO     | [payload] validate_post thread has finished
[2026-03-17 20:23:52] 2026-03-18 00:23:21,039 | INFO     | [payload] control thread has finished
[2026-03-17 20:23:52] 2026-03-18 00:23:21,055 | INFO     | [job] validate thread has finished
[2026-03-17 20:23:52] 2026-03-18 00:23:21,058 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-17 20:23:52] 2026-03-18 00:23:21,273 | INFO     | [job] control thread has finished
[2026-03-17 20:23:52] 2026-03-18 00:23:21,409 | INFO     | [payload] failed_post thread has finished
[2026-03-17 20:23:52] 2026-03-18 00:23:21,442 | INFO     | [payload] execute_payloads thread has finished
[2026-03-17 20:23:52] 2026-03-18 00:23:21,465 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-17 20:23:52] 2026-03-18 00:23:21,881 | INFO     | [data] copytool_in thread has finished
[2026-03-17 20:23:52] 2026-03-18 00:23:22,519 | INFO     | [data] copytool_out thread has finished
[2026-03-17 20:23:52] 2026-03-18 00:23:25,471 | INFO     | [data] queue_monitor thread has finished
[2026-03-17 20:23:52] 2026-03-18 00:23:45,525 | INFO     | [monitor] cgroup control has ended
[2026-03-17 20:23:52] 2026-03-18 00:23:47,121 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139995300009792)>', '<ExcThread(monitor, started 139994584835840)>']
[2026-03-17 20:23:52] 2026-03-18 00:23:50,283 | INFO     | PID=32748 has CPU usage=11.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-17 20:23:52] 2026-03-18 00:23:50,283 | INFO     | found 0 job(s) in 20 queues
[2026-03-17 20:23:52] 2026-03-18 00:23:50,283 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-17 20:23:52] 2026-03-18 00:23:50,283 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-17 20:23:52] 2026-03-18 00:23:50,283 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-17 20:23:52] 2026-03-18 00:23:50,283 | INFO     | [monitor] control thread has ended
[2026-03-17 20:23:52] 2026-03-18 00:23:52,147 | INFO     | all workflow threads have been joined
[2026-03-17 20:23:52] 2026-03-18 00:23:52,147 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-17 20:23:52] 2026-03-18 00:23:52,147 | INFO     | traces error code: 0
[2026-03-17 20:23:52] 2026-03-18 00:23:52,148 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-17 20:23:52] 2026-03-18 00:23:52,314 [wrapper] ==== pilot stdout END ====
[2026-03-17 20:23:52] 2026-03-18 00:23:52,319 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-17 20:23:52] 2026-03-18 00:23:52,324 [wrapper] pilotpid: 32748
[2026-03-17 20:23:52] 2026-03-18 00:23:52,328 [wrapper] Pilot exit status: 0
[2026-03-17 20:23:52] 2026-03-18 00:23:52,358 [wrapper] pandaids: 7056043613 7056043613
[2026-03-17 20:23:52] 2026-03-18 00:23:52,405 [wrapper] cleanup supervisor_pilot 30552 32749
[2026-03-17 20:23:52] 2026-03-18 00:23:52,417 [wrapper] Test setup, not cleaning
[2026-03-17 20:23:52] 2026-03-18 00:23:52,422 [wrapper] apfmon messages muted
[2026-03-17 20:23:52] 2026-03-18 00:23:52,427 [wrapper] ==== wrapper stdout END ====
[2026-03-17 20:23:52] 2026-03-18 00:23:52,431 [wrapper] ==== wrapper stderr END ====
[2026-03-17 20:23:52]  *** Error codes and diagnostics ***
[2026-03-17 20:23:52]     "exeErrorCode": 0,
[2026-03-17 20:23:52]     "exeErrorDiag": "",
[2026-03-17 20:23:52]     "pilotErrorCode": 0,
[2026-03-17 20:23:52]     "pilotErrorDiag": "",
[2026-03-17 20:23:52]  *** Listing of results directory ***
[2026-03-17 20:23:52] total 2606252
[2026-03-17 20:23:52] drwx------ 5 boincer umatlas       4096 Mar 10 12:00 pilot3
[2026-03-17 20:23:52] -rw-r--r-- 1 boincer umatlas     585013 Mar 15 13:06 pilot3.tar.gz
[2026-03-17 20:23:52] -rwx------ 1 boincer umatlas      36322 Mar 15 13:29 runpilot2-wrapper.sh
[2026-03-17 20:23:52] -rw-r--r-- 1 boincer umatlas       5111 Mar 15 13:29 queuedata.json
[2026-03-17 20:23:52] -rw-r--r-- 1 boincer umatlas        100 Mar 15 13:30 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-17 20:23:52] -rwxr-xr-x 1 boincer umatlas       7986 Mar 15 13:30 run_atlas
[2026-03-17 20:23:52] -rw-r--r-- 1 boincer umatlas        105 Mar 15 13:30 job.xml
[2026-03-17 20:23:52] -rw-r--r-- 3 boincer umatlas  339028613 Mar 15 13:30 EVNT.49151569._000001.pool.root.1
[2026-03-17 20:23:52] -rw-r--r-- 3 boincer umatlas  339028613 Mar 15 13:30 ATLAS.root_0
[2026-03-17 20:23:52] -rw-r--r-- 2 boincer umatlas      15845 Mar 15 13:30 start_atlas.sh
[2026-03-17 20:23:52] drwxrwx--x 2 boincer umatlas       4096 Mar 15 13:30 shared
[2026-03-17 20:23:52] -rw-r--r-- 2 boincer umatlas     597711 Mar 15 13:30 input.tar.gz
[2026-03-17 20:23:52] -rw-r--r-- 1 boincer umatlas          0 Mar 15 13:30 boinc_lockfile
[2026-03-17 20:23:52] -rw-r--r-- 1 boincer umatlas       2940 Mar 16 05:11 pandaJob.out
[2026-03-17 20:23:52] -rw------- 1 boincer umatlas         57 Mar 16 05:11 setup.sh.local
[2026-03-17 20:23:52] -rw------- 1 boincer umatlas    1006405 Mar 16 05:11 agis_schedconf.cvmfs.json
[2026-03-17 20:23:52] -rw------- 1 boincer umatlas        432 Mar 16 05:11 workernode_map.json
[2026-03-17 20:23:52] -rw-r--r-- 1 boincer umatlas        534 Mar 17 20:02 boinc_task_state.xml
[2026-03-17 20:23:52] -rw-r--r-- 1 boincer umatlas       5913 Mar 17 20:20 init_data.xml
[2026-03-17 20:23:52] -rw------- 1 boincer umatlas 1941136683 Mar 17 20:22 HITS.49151576._000004.pool.root.1
[2026-03-17 20:23:52] -rw------- 1 boincer umatlas         96 Mar 17 20:22 pilot_heartbeat.json
[2026-03-17 20:23:52] -rw------- 1 boincer umatlas       1072 Mar 17 20:23 memory_monitor_summary.json
[2026-03-17 20:23:52] -rw------- 1 boincer umatlas    1511579 Mar 17 20:23 agis_ddmendpoints.agis.ALL.json
[2026-03-17 20:23:52] -rw------- 1 boincer umatlas    3429319 Mar 17 20:23 log.49151576._000004.job.log.tgz.1
[2026-03-17 20:23:52] -rw------- 1 boincer umatlas       7066 Mar 17 20:23 heartbeat.json
[2026-03-17 20:23:52] -rw-r--r-- 1 boincer umatlas         31 Mar 17 20:23 wrapper_checkpoint.txt
[2026-03-17 20:23:52] -rw-r--r-- 1 boincer umatlas       8192 Mar 17 20:23 boinc_mmap_file
[2026-03-17 20:23:52] -rw------- 1 boincer umatlas       4743 Mar 17 20:23 pilotlog.txt
[2026-03-17 20:23:52] -rw------- 1 boincer umatlas   19400459 Mar 17 20:23 log.49151576._000004.job.log.1
[2026-03-17 20:23:52] -rw------- 1 boincer umatlas        353 Mar 17 20:23 output.list
[2026-03-17 20:23:52] -rw-r--r-- 1 boincer umatlas        620 Mar 17 20:23 runtime_log
[2026-03-17 20:23:52] -rw------- 1 boincer umatlas   22845440 Mar 17 20:23 result.tar.gz
[2026-03-17 20:23:52] -rw-r--r-- 1 boincer umatlas       9423 Mar 17 20:23 runtime_log.err
[2026-03-17 20:23:52] -rw------- 1 boincer umatlas        798 Mar 17 20:23 3mzKDmUS4L9n9Rq4apOajLDm4fhM0noT9bVooX4SDm0KsLDmZ8kFRo.diag
[2026-03-17 20:23:52] -rw-r--r-- 1 boincer umatlas      23136 Mar 17 20:23 stderr.txt
[2026-03-17 20:23:52] HITS file was successfully produced:
[2026-03-17 20:23:52] -rw------- 1 boincer umatlas 1941136683 Mar 17 20:22 shared/HITS.pool.root.1
[2026-03-17 20:23:52]  *** Contents of shared directory: ***
[2026-03-17 20:23:52] total 2249648
[2026-03-17 20:23:52] -rw-r--r-- 3 boincer umatlas  339028613 Mar 15 13:30 ATLAS.root_0
[2026-03-17 20:23:52] -rw-r--r-- 2 boincer umatlas      15845 Mar 15 13:30 start_atlas.sh
[2026-03-17 20:23:52] -rw-r--r-- 2 boincer umatlas     597711 Mar 15 13:30 input.tar.gz
[2026-03-17 20:23:52] -rw------- 1 boincer umatlas 1941136683 Mar 17 20:22 HITS.pool.root.1
[2026-03-17 20:23:52] -rw------- 1 boincer umatlas   22845440 Mar 17 20:23 result.tar.gz
20:23:53 (29045): run_atlas exited; CPU time 1084576.616370
20:23:53 (29045): called boinc_finish(0)

</stderr_txt>
]]>

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