Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:53:23 (3815049): wrapper (7.7.26015): starting
22:53:23 (3815049): wrapper: running run_atlas (--nthreads 4)
[2026-03-15 22:53:23] Arguments: --nthreads 4
[2026-03-15 22:53:23] Threads: 4
[2026-03-15 22:53:23] Checking for CVMFS
[2026-03-15 22:53:23] No cvmfs_config command found, will try listing directly
[2026-03-15 22:53:23] CVMFS is ok
[2026-03-15 22:53:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-15 22:53:23] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-15 22:53:23] Further information can be found at the LHC@home message board.
[2026-03-15 22:53:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-15 22:53:23] Checking for apptainer binary...
[2026-03-15 22:53:23] which: no apptainer in ((null))
[2026-03-15 22:53:23] apptainer is not installed, using version from CVMFS
[2026-03-15 22:53:23] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-15 22:53:23] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot16/slots/9/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut01.grid.cesnet.cz
[2026-03-15 22:53:23] apptainer works
[2026-03-15 22:53:23] Set ATHENA_PROC_NUMBER=4
[2026-03-15 22:53:23] Set ATHENA_CORE_NUMBER=4
[2026-03-15 22:53:23] Starting ATLAS job with PandaID=7056017440
[2026-03-15 22:53:23] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot16/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
00:57:50 (4027201): wrapper (7.7.26015): starting
00:57:50 (4027201): wrapper: running run_atlas (--nthreads 4)
[2026-03-16 00:57:50] Arguments: --nthreads 4
[2026-03-16 00:57:50] Threads: 4
[2026-03-16 00:57:50] This job has been restarted, cleaning up previous attempt
[2026-03-16 00:57:50] Checking for CVMFS
[2026-03-16 00:57:50] No cvmfs_config command found, will try listing directly
[2026-03-16 00:57:50] CVMFS is ok
[2026-03-16 00:57:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-16 00:57:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-16 00:57:50] Further information can be found at the LHC@home message board.
[2026-03-16 00:57:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-16 00:57:50] Checking for apptainer binary...
[2026-03-16 00:57:50] which: no apptainer in ((null))
[2026-03-16 00:57:50] apptainer is not installed, using version from CVMFS
[2026-03-16 00:57:50] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-16 00:57:50] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot16/slots/9/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut01.grid.cesnet.cz
[2026-03-16 00:57:50] apptainer works
[2026-03-16 00:57:50] Set ATHENA_PROC_NUMBER=4
[2026-03-16 00:57:50] Set ATHENA_CORE_NUMBER=4
[2026-03-16 00:57:50] Starting ATLAS job with PandaID=7056017440
[2026-03-16 00:57:50] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot16/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-16 05:10:33]  *** The last 200 lines of the pilot log: ***
[2026-03-16 05:10:33] 2026-03-16 04:09:51,926 | INFO     | extracted standard info from prmon json
[2026-03-16 05:10:33] 2026-03-16 04:09:51,927 | INFO     | extracted standard memory fields from prmon json
[2026-03-16 05:10:33] 2026-03-16 04:09:51,927 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-16 05:10:33] 2026-03-16 04:09:51,927 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-16 05:10:33] 2026-03-16 04:09:51,927 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-16 05:10:33] 2026-03-16 04:09:51,931 | INFO     | fitting pss+swap vs Time
[2026-03-16 05:10:33] 2026-03-16 04:09:51,932 | INFO     | sum of square deviations: 4729613223.995997
[2026-03-16 05:10:33] 2026-03-16 04:09:51,934 | INFO     | sum of deviations: 26299327723.22181
[2026-03-16 05:10:33] 2026-03-16 04:09:51,934 | INFO     | mean x: 1773626637.5040324
[2026-03-16 05:10:33] 2026-03-16 04:09:51,934 | INFO     | mean y: 2309827.2782258065
[2026-03-16 05:10:33] 2026-03-16 04:09:51,934 | INFO     | intersect: -9860058613.696423
[2026-03-16 05:10:33] 2026-03-16 04:09:51,934 | INFO     | chi2: 2.158512013347859
[2026-03-16 05:10:33] 2026-03-16 04:09:51,935 | INFO     | sum of square deviations: 4449273388.995921
[2026-03-16 05:10:33] 2026-03-16 04:09:51,936 | INFO     | sum of deviations: 40746947748.56379
[2026-03-16 05:10:33] 2026-03-16 04:09:51,936 | INFO     | mean x: 1773626485.0041153
[2026-03-16 05:10:33] 2026-03-16 04:09:51,937 | INFO     | mean y: 2317548.4362139916
[2026-03-16 05:10:33] 2026-03-16 04:09:51,937 | INFO     | intersect: -16240753935.701305
[2026-03-16 05:10:33] 2026-03-16 04:09:51,937 | INFO     | chi2: 1.371326463425927
[2026-03-16 05:10:33] 2026-03-16 04:09:51,937 | INFO     | current chi2=1.371326463425927 (change=36.468898252783156 %)
[2026-03-16 05:10:33] 2026-03-16 04:09:51,937 | INFO     | sum of square deviations: 4180236091.4958158
[2026-03-16 05:10:33] 2026-03-16 04:09:51,939 | INFO     | sum of deviations: 39465242277.529396
[2026-03-16 05:10:33] 2026-03-16 04:09:51,939 | INFO     | mean x: 1773626332.5042017
[2026-03-16 05:10:33] 2026-03-16 04:09:51,939 | INFO     | mean y: 2316822.470588235
[2026-03-16 05:10:33] 2026-03-16 04:09:51,939 | INFO     | intersect: -16742333812.091375
[2026-03-16 05:10:33] 2026-03-16 04:09:51,940 | INFO     | chi2: 1.3718043632872876
[2026-03-16 05:10:33] 2026-03-16 04:09:51,940 | INFO     | current chi2=1.3718043632872876 (change=-0.034849459563894125 %)
[2026-03-16 05:10:33] 2026-03-16 04:09:51,940 | INFO     | right removable region: 237
[2026-03-16 05:10:33] 2026-03-16 04:09:51,940 | INFO     | sum of square deviations: 4449272778.995921
[2026-03-16 05:10:33] 2026-03-16 04:09:51,942 | INFO     | sum of deviations: -7595284026.053496
[2026-03-16 05:10:33] 2026-03-16 04:09:51,942 | INFO     | mean x: 1773626790.0041153
[2026-03-16 05:10:33] 2026-03-16 04:09:51,942 | INFO     | mean y: 2328093.053497942
[2026-03-16 05:10:33] 2026-03-16 04:09:51,942 | INFO     | intersect: 3030058667.338241
[2026-03-16 05:10:33] 2026-03-16 04:09:51,943 | INFO     | chi2: 0.812893608860695
[2026-03-16 05:10:33] 2026-03-16 04:09:51,943 | INFO     | current chi2=0.812893608860695 (change=62.34009336830631 %)
[2026-03-16 05:10:33] 2026-03-16 04:09:51,943 | INFO     | sum of square deviations: 4180234871.4958158
[2026-03-16 05:10:33] 2026-03-16 04:09:51,944 | INFO     | sum of deviations: -9277565716.823528
[2026-03-16 05:10:33] 2026-03-16 04:09:51,945 | INFO     | mean x: 1773626942.5042017
[2026-03-16 05:10:33] 2026-03-16 04:09:51,945 | INFO     | mean y: 2329030.8235294116
[2026-03-16 05:10:33] 2026-03-16 04:09:51,945 | INFO     | intersect: 3938696489.1246066
[2026-03-16 05:10:33] 2026-03-16 04:09:51,945 | INFO     | chi2: 0.8066939530230546
[2026-03-16 05:10:33] 2026-03-16 04:09:51,945 | INFO     | current chi2=0.8066939530230546 (change=0.76266509787541 %)
[2026-03-16 05:10:33] 2026-03-16 04:09:51,945 | INFO     | left removable region: 20
[2026-03-16 05:10:33] 2026-03-16 04:09:51,946 | INFO     | sum of square deviations: 3168452240.9953957
[2026-03-16 05:10:33] 2026-03-16 04:09:51,947 | INFO     | sum of deviations: 5565130743.027653
[2026-03-16 05:10:33] 2026-03-16 04:09:51,947 | INFO     | mean x: 1773626912.0046084
[2026-03-16 05:10:33] 2026-03-16 04:09:51,947 | INFO     | mean y: 2336607.9723502304
[2026-03-16 05:10:33] 2026-03-16 04:09:51,947 | INFO     | intersect: -3112895973.711494
[2026-03-16 05:10:33] 2026-03-16 04:09:51,948 | INFO     | chi2: 0.0010367585816989978
[2026-03-16 05:10:33] 2026-03-16 04:09:51,948 | INFO     | current memory leak: 1.76 B/s (using 217 data points, chi2=0.00)
[2026-03-16 05:10:33] 2026-03-16 04:09:51,948 | INFO     | could have reported an average CPU frequency of 2518 MHz (12 samples)
[2026-03-16 05:10:33] 2026-03-16 04:09:51,949 | INFO     | ..............................
[2026-03-16 05:10:33] 2026-03-16 04:09:51,949 | INFO     | . Timing measurements:
[2026-03-16 05:10:33] 2026-03-16 04:09:51,949 | INFO     | . get job = 0 s
[2026-03-16 05:10:33] 2026-03-16 04:09:51,949 | INFO     | . initial setup = 1 s
[2026-03-16 05:10:33] 2026-03-16 04:09:51,949 | INFO     | . payload setup = 5 s
[2026-03-16 05:10:33] 2026-03-16 04:09:51,949 | INFO     | . stage-in = 0 s
[2026-03-16 05:10:33] 2026-03-16 04:09:51,949 | INFO     | . payload execution = 15086 s
[2026-03-16 05:10:33] 2026-03-16 04:09:51,949 | INFO     | . stage-out = 1 s
[2026-03-16 05:10:33] 2026-03-16 04:09:51,949 | INFO     | . log creation = 0 s
[2026-03-16 05:10:33] 2026-03-16 04:09:51,949 | INFO     | ..............................
[2026-03-16 05:10:33] 2026-03-16 04:09:52,287 | INFO     | 
[2026-03-16 05:10:33] 2026-03-16 04:09:52,287 | INFO     | job summary report
[2026-03-16 05:10:33] 2026-03-16 04:09:52,287 | INFO     | --------------------------------------------------
[2026-03-16 05:10:33] 2026-03-16 04:09:52,287 | INFO     | PanDA job id: 7056017440
[2026-03-16 05:10:33] 2026-03-16 04:09:52,287 | INFO     | task id: 48967011
[2026-03-16 05:10:33] 2026-03-16 04:09:52,287 | INFO     | errors: (none)
[2026-03-16 05:10:33] 2026-03-16 04:09:52,287 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-16 05:10:33] 2026-03-16 04:09:52,287 | INFO     | pilot state: finished 
[2026-03-16 05:10:33] 2026-03-16 04:09:52,288 | INFO     | transexitcode: 0
[2026-03-16 05:10:33] 2026-03-16 04:09:52,288 | INFO     | exeerrorcode: 0
[2026-03-16 05:10:33] 2026-03-16 04:09:52,288 | INFO     | exeerrordiag: 
[2026-03-16 05:10:33] 2026-03-16 04:09:52,288 | INFO     | exitcode: 0
[2026-03-16 05:10:33] 2026-03-16 04:09:52,288 | INFO     | exitmsg: OK
[2026-03-16 05:10:33] 2026-03-16 04:09:52,288 | INFO     | cpuconsumptiontime: 56837 s
[2026-03-16 05:10:33] 2026-03-16 04:09:52,288 | INFO     | nevents: 400
[2026-03-16 05:10:33] 2026-03-16 04:09:52,288 | INFO     | neventsw: 0
[2026-03-16 05:10:33] 2026-03-16 04:09:52,288 | INFO     | pid: 4040014
[2026-03-16 05:10:33] 2026-03-16 04:09:52,288 | INFO     | pgrp: 4040014
[2026-03-16 05:10:33] 2026-03-16 04:09:52,288 | INFO     | corecount: 4
[2026-03-16 05:10:33] 2026-03-16 04:09:52,288 | INFO     | event service: False
[2026-03-16 05:10:33] 2026-03-16 04:09:52,288 | INFO     | sizes: {0: 2279829, 1: 2280290, 11: 2280290, 15096: 2311549, 15098: 2320569, 15099: 2320947}
[2026-03-16 05:10:33] 2026-03-16 04:09:52,288 | INFO     | --------------------------------------------------
[2026-03-16 05:10:33] 2026-03-16 04:09:52,289 | INFO     | 
[2026-03-16 05:10:33] 2026-03-16 04:09:52,289 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot16/slots/9
[2026-03-16 05:10:33] 2026-03-16 04:09:52,310 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-16 05:10:33] 2026-03-16 04:09:52,310 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-16 05:10:33] 2026-03-16 04:09:52,310 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-16 05:10:33] 2026-03-16 04:09:52,311 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-16 05:10:33] 2026-03-16 04:09:52,311 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-16 05:10:33] 2026-03-16 04:09:52,311 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-16 05:10:33] 2026-03-16 04:09:52,311 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-16 05:10:33] 2026-03-16 04:09:52,311 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-16 05:10:33] 2026-03-16 04:09:52,311 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-16 05:10:33] 2026-03-16 04:09:52,311 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-16 05:10:33] 2026-03-16 04:09:52,311 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-16 05:10:33] 2026-03-16 04:09:52,311 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-16 05:10:33] 2026-03-16 04:09:52,311 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-16 05:10:33] 2026-03-16 04:09:52,311 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-16 05:10:33] 2026-03-16 04:09:52,311 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-16 05:10:33] 2026-03-16 04:09:52,312 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-16 05:10:33] 2026-03-16 04:09:52,312 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-16 05:10:33] 2026-03-16 04:09:52,312 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-16 05:10:33] 2026-03-16 04:09:52,312 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-16 05:10:33] 2026-03-16 04:09:52,312 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-16 05:10:33] 2026-03-16 04:09:52,312 | INFO     | job 7056017440 has completed (purged errors)
[2026-03-16 05:10:33] 2026-03-16 04:09:52,312 | INFO     | overall cleanup function is called
[2026-03-16 05:10:33] 2026-03-16 04:09:53,017 | WARNING  | process 4040014 can no longer be monitored (due to stat problems) - aborting
[2026-03-16 05:10:33] 2026-03-16 04:09:53,308 | INFO     | using path: /var/lib/boinc/var/slot16/slots/9/memory_monitor_summary.json (trf name=prmon)
[2026-03-16 05:10:33] 2026-03-16 04:09:53,320 | INFO     | --- collectZombieJob: --- 10, [4040014]
[2026-03-16 05:10:33] 2026-03-16 04:09:53,320 | INFO     | zombie collector waiting for pid 4040014
[2026-03-16 05:10:33] 2026-03-16 04:09:53,320 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-16 05:10:33] 2026-03-16 04:09:53,320 | INFO     | collected zombie processes
[2026-03-16 05:10:33] 2026-03-16 04:09:53,320 | INFO     | will attempt to kill all subprocesses of pid=4040014
[2026-03-16 05:10:33] 2026-03-16 04:09:54,083 | INFO     | number of running child processes to parent process 4040014: 1
[2026-03-16 05:10:33] 2026-03-16 04:09:54,083 | INFO     | maximum number of monitored processes: 6
[2026-03-16 05:10:33] 2026-03-16 04:09:54,083 | INFO     | aborting job monitoring since job object (job id=7056017440) has expired
[2026-03-16 05:10:33] 2026-03-16 04:09:54,136 | INFO     | process IDs to be killed: [4040014] (in reverse order)
[2026-03-16 05:10:33] 2026-03-16 04:09:54,278 | WARNING  | found no corresponding commands to process id(s)
[2026-03-16 05:10:33] 2026-03-16 04:09:54,278 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-16 05:10:33] 2026-03-16 04:09:54,290 | INFO     | did not find any defunct processes belonging to 4040014
[2026-03-16 05:10:33] 2026-03-16 04:09:54,301 | INFO     | did not find any defunct processes belonging to 4040014
[2026-03-16 05:10:33] 2026-03-16 04:09:54,302 | INFO     | ready for new job
[2026-03-16 05:10:33] 2026-03-16 04:09:54,302 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-16 05:10:33] 2026-03-16 04:09:54,304 | INFO     | **************************************
[2026-03-16 05:10:33] 2026-03-16 04:09:54,304 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-16 05:10:33] 2026-03-16 04:09:54,304 | INFO     | **************************************
[2026-03-16 05:10:33] 2026-03-16 04:09:54,304 | INFO     | 
[2026-03-16 05:10:33] 2026-03-16 04:09:54,308 | INFO     | architecture information:
[2026-03-16 05:10:33] 2026-03-16 04:09:54,308 | INFO     | executing command: cat /etc/os-release
[2026-03-16 05:10:33] 2026-03-16 04:09:54,327 | INFO     | cat /etc/os-release:
[2026-03-16 05:10:33] NAME="CentOS Linux"
[2026-03-16 05:10:33] VERSION="7 (Core)"
[2026-03-16 05:10:33] ID="centos"
[2026-03-16 05:10:33] ID_LIKE="rhel fedora"
[2026-03-16 05:10:33] VERSION_ID="7"
[2026-03-16 05:10:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-16 05:10:33] ANSI_COLOR="0;31"
[2026-03-16 05:10:33] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-16 05:10:33] HOME_URL="https://www.centos.org/"
[2026-03-16 05:10:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-16 05:10:33] 
[2026-03-16 05:10:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-16 05:10:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-16 05:10:33] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-16 05:10:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-16 05:10:33] 
[2026-03-16 05:10:33] 2026-03-16 04:09:54,327 | INFO     | **************************************
[2026-03-16 05:10:33] 2026-03-16 04:09:54,828 | INFO     | executing command: df -mP /var/lib/boinc/var/slot16/slots/9
[2026-03-16 05:10:33] 2026-03-16 04:09:54,845 | INFO     | sufficient remaining disk space (49373249536 B)
[2026-03-16 05:10:33] 2026-03-16 04:09:54,845 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-16 05:10:33] 2026-03-16 04:09:54,846 | INFO     | current server update state: UPDATING_FINAL
[2026-03-16 05:10:33] 2026-03-16 04:09:54,846 | INFO     | update_server=False
[2026-03-16 05:10:33] 2026-03-16 04:09:54,846 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-16 05:10:33] 2026-03-16 04:09:54,846 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-16 05:10:33] 2026-03-16 04:09:54,846 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-16 05:10:33] 2026-03-16 04:09:54,847 | INFO     | will abort loop
[2026-03-16 05:10:33] 2026-03-16 04:09:55,441 | INFO     | all data control threads have been joined
[2026-03-16 05:10:33] 2026-03-16 04:09:55,655 | INFO     | all payload control threads have been joined
[2026-03-16 05:10:33] 2026-03-16 04:09:55,741 | INFO     | all job control threads have been joined
[2026-03-16 05:10:33] 2026-03-16 04:09:55,851 | INFO     | [job] retrieve thread has finished
[2026-03-16 05:10:33] 2026-03-16 04:09:55,852 | INFO     | [job] job monitor thread has finished
[2026-03-16 05:10:33] 2026-03-16 04:09:56,119 | INFO     | [payload] failed_post thread has finished
[2026-03-16 05:10:33] 2026-03-16 04:09:56,124 | INFO     | [payload] execute_payloads thread has finished
[2026-03-16 05:10:33] 2026-03-16 04:09:56,446 | INFO     | [data] control thread has finished
[2026-03-16 05:10:33] 2026-03-16 04:09:56,489 | INFO     | [job] create_data_payload thread has finished
[2026-03-16 05:10:33] 2026-03-16 04:09:56,660 | INFO     | [payload] control thread has finished
[2026-03-16 05:10:33] 2026-03-16 04:09:56,746 | INFO     | [job] control thread has finished
[2026-03-16 05:10:33] 2026-03-16 04:09:56,825 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-16 05:10:33] 2026-03-16 04:09:56,851 | INFO     | [data] copytool_out thread has finished
[2026-03-16 05:10:33] 2026-03-16 04:09:56,970 | INFO     | [job] validate thread has finished
[2026-03-16 05:10:33] 2026-03-16 04:09:56,987 | INFO     | [data] copytool_in thread has finished
[2026-03-16 05:10:33] 2026-03-16 04:09:57,022 | INFO     | [payload] validate_post thread has finished
[2026-03-16 05:10:33] 2026-03-16 04:09:57,047 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-16 05:10:33] 2026-03-16 04:09:57,125 | INFO     | [payload] validate_pre thread has finished
[2026-03-16 05:10:33] 2026-03-16 04:09:57,917 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-16 05:10:33] 2026-03-16 04:09:58,052 | INFO     | [job] queue monitor thread has finished
[2026-03-16 05:10:33] 2026-03-16 04:10:01,923 | INFO     | [data] queue_monitor thread has finished
[2026-03-16 05:10:33] 2026-03-16 04:10:24,892 | INFO     | PID=4031693 has CPU usage=8.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-16 05:10:33] 2026-03-16 04:10:24,892 | INFO     | .. there are 13 such processes running
[2026-03-16 05:10:33] 2026-03-16 04:10:24,893 | INFO     | found 0 job(s) in 20 queues
[2026-03-16 05:10:33] 2026-03-16 04:10:24,893 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-16 05:10:33] 2026-03-16 04:10:24,893 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-16 05:10:33] 2026-03-16 04:10:26,953 | INFO     | [monitor] cgroup control has ended
[2026-03-16 05:10:33] 2026-03-16 04:10:28,618 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22483297822528)>', '<ExcThread(monitor, started 22483064600320)>']
[2026-03-16 05:10:33] 2026-03-16 04:10:28,915 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-16 05:10:33] 2026-03-16 04:10:28,915 | INFO     | [monitor] control thread has ended
[2026-03-16 05:10:33] 2026-03-16 04:10:33,643 | INFO     | all workflow threads have been joined
[2026-03-16 05:10:33] 2026-03-16 04:10:33,643 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-16 05:10:33] 2026-03-16 04:10:33,643 | INFO     | traces error code: 0
[2026-03-16 05:10:33] 2026-03-16 04:10:33,643 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-16 05:10:33] 2026-03-16 04:10:33,784 [wrapper] ==== pilot stdout END ====
[2026-03-16 05:10:33] 2026-03-16 04:10:33,786 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-16 05:10:33] 2026-03-16 04:10:33,789 [wrapper] pilotpid: 4031693
[2026-03-16 05:10:33] 2026-03-16 04:10:33,792 [wrapper] Pilot exit status: 0
[2026-03-16 05:10:33] 2026-03-16 04:10:33,805 [wrapper] pandaids: 7056017440 7056017440
[2026-03-16 05:10:33] 2026-03-16 04:10:33,881 [wrapper] cleanup supervisor_pilot  139023 4031694
[2026-03-16 05:10:33] 2026-03-16 04:10:33,884 [wrapper] Test setup, not cleaning
[2026-03-16 05:10:33] 2026-03-16 04:10:33,886 [wrapper] apfmon messages muted
[2026-03-16 05:10:33] 2026-03-16 04:10:33,889 [wrapper] ==== wrapper stdout END ====
[2026-03-16 05:10:33] 2026-03-16 04:10:33,891 [wrapper] ==== wrapper stderr END ====
[2026-03-16 05:10:33]  *** Error codes and diagnostics ***
[2026-03-16 05:10:33]     "exeErrorCode": 0,
[2026-03-16 05:10:33]     "exeErrorDiag": "",
[2026-03-16 05:10:33]     "pilotErrorCode": 0,
[2026-03-16 05:10:33]     "pilotErrorDiag": "",
[2026-03-16 05:10:33]  *** Listing of results directory ***
[2026-03-16 05:10:33] total 645148
[2026-03-16 05:10:33] drwx------. 5 boinc boinc      4096 Mar 10 17:00 pilot3
[2026-03-16 05:10:33] -rw-r--r--. 1 boinc boinc    585013 Mar 15 17:38 pilot3.tar.gz
[2026-03-16 05:10:33] -rwx------. 1 boinc boinc     36322 Mar 15 17:42 runpilot2-wrapper.sh
[2026-03-16 05:10:33] -rw-r--r--. 1 boinc boinc      5111 Mar 15 17:42 queuedata.json
[2026-03-16 05:10:33] -rw-r--r--. 1 boinc boinc       100 Mar 15 22:41 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-16 05:10:33] -rwxr-xr-x. 1 boinc boinc      7986 Mar 15 22:41 run_atlas
[2026-03-16 05:10:33] -rw-r--r--. 1 boinc boinc       105 Mar 15 22:41 job.xml
[2026-03-16 05:10:33] -rw-r--r--. 3 boinc boinc 218491615 Mar 15 22:53 EVNT.48967008._000586.pool.root.1
[2026-03-16 05:10:33] -rw-r--r--. 3 boinc boinc 218491615 Mar 15 22:53 ATLAS.root_0
[2026-03-16 05:10:33] -rw-r--r--. 2 boinc boinc     15845 Mar 15 22:53 start_atlas.sh
[2026-03-16 05:10:33] drwxrwx--x. 2 boinc boinc      4096 Mar 15 22:53 shared
[2026-03-16 05:10:33] -rw-r--r--. 2 boinc boinc    597519 Mar 15 22:53 input.tar.gz
[2026-03-16 05:10:33] -rw-r--r--. 1 boinc boinc         0 Mar 15 22:53 boinc_lockfile
[2026-03-16 05:10:33] -rw-r--r--. 1 boinc boinc      2572 Mar 16 00:57 pandaJob.out
[2026-03-16 05:10:33] -rw-------. 1 boinc boinc   1006471 Mar 16 00:58 agis_schedconf.cvmfs.json
[2026-03-16 05:10:33] -rw-------. 1 boinc boinc       448 Mar 16 00:58 workernode_map.json
[2026-03-16 05:10:33] -rw-r--r--. 1 boinc boinc      6569 Mar 16 00:58 init_data.xml
[2026-03-16 05:10:33] -rw-------. 1 boinc boinc 214599659 Mar 16 05:09 HITS.48967011._015244.pool.root.1
[2026-03-16 05:10:33] -rw-r--r--. 1 boinc boinc       530 Mar 16 05:09 boinc_task_state.xml
[2026-03-16 05:10:33] -rw-------. 1 boinc boinc        97 Mar 16 05:09 pilot_heartbeat.json
[2026-03-16 05:10:33] -rw-------. 1 boinc boinc      1033 Mar 16 05:09 memory_monitor_summary.json
[2026-03-16 05:10:33] -rw-------. 1 boinc boinc   1511579 Mar 16 05:09 agis_ddmendpoints.agis.ALL.json
[2026-03-16 05:10:33] -rw-------. 1 boinc boinc    427048 Mar 16 05:09 log.48967011._015244.job.log.tgz.1
[2026-03-16 05:10:33] -rw-------. 1 boinc boinc      6400 Mar 16 05:09 heartbeat.json
[2026-03-16 05:10:33] -rw-r--r--. 1 boinc boinc      8192 Mar 16 05:10 boinc_mmap_file
[2026-03-16 05:10:33] -rw-r--r--. 1 boinc boinc        28 Mar 16 05:10 wrapper_checkpoint.txt
[2026-03-16 05:10:33] -rw-------. 1 boinc boinc      4831 Mar 16 05:10 pilotlog.txt
[2026-03-16 05:10:33] -rw-------. 1 boinc boinc   2122994 Mar 16 05:10 log.48967011._015244.job.log.1
[2026-03-16 05:10:33] -rw-------. 1 boinc boinc       357 Mar 16 05:10 output.list
[2026-03-16 05:10:33] -rw-r--r--. 1 boinc boinc       620 Mar 16 05:10 runtime_log
[2026-03-16 05:10:33] -rw-------. 1 boinc boinc   2570240 Mar 16 05:10 result.tar.gz
[2026-03-16 05:10:33] -rw-r--r--. 1 boinc boinc      9282 Mar 16 05:10 runtime_log.err
[2026-03-16 05:10:33] -rw-------. 1 boinc boinc       790 Mar 16 05:10 03jKDmki3L9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmXMvLDmGNPmRo.diag
[2026-03-16 05:10:33] -rw-r--r--. 1 boinc boinc     22847 Mar 16 05:10 stderr.txt
[2026-03-16 05:10:33] HITS file was successfully produced:
[2026-03-16 05:10:33] -rw-------. 1 boinc boinc 214599659 Mar 16 05:09 shared/HITS.pool.root.1
[2026-03-16 05:10:33]  *** Contents of shared directory: ***
[2026-03-16 05:10:33] total 426064
[2026-03-16 05:10:33] -rw-r--r--. 3 boinc boinc 218491615 Mar 15 22:53 ATLAS.root_0
[2026-03-16 05:10:33] -rw-r--r--. 2 boinc boinc     15845 Mar 15 22:53 start_atlas.sh
[2026-03-16 05:10:33] -rw-r--r--. 2 boinc boinc    597519 Mar 15 22:53 input.tar.gz
[2026-03-16 05:10:33] -rw-------. 1 boinc boinc 214599659 Mar 16 05:09 HITS.pool.root.1
[2026-03-16 05:10:33] -rw-------. 1 boinc boinc   2570240 Mar 16 05:10 result.tar.gz
05:10:35 (4027201): run_atlas exited; CPU time 57420.774628
05:10:35 (4027201): called boinc_finish(0)

</stderr_txt>
]]>

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