Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
19:48:03 (2851204): wrapper (7.7.26015): starting
19:48:03 (2851204): wrapper: running run_atlas (--nthreads 8)
[2026-03-15 19:48:03] Arguments: --nthreads 8
[2026-03-15 19:48:03] Threads: 8
[2026-03-15 19:48:03] Checking for CVMFS
[2026-03-15 19:48:03] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-15 19:48:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-15 19:48:03] Running cvmfs_config stat atlas.cern.ch
[2026-03-15 19:48:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-15 19:48:03] 2.13.3.0 7202 115554 148060 157333 3 14 40184071 40960000 100 16776704 0 76189755 99.625 74506321 30333 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-15 19:48:03] CVMFS is ok
[2026-03-15 19:48:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-15 19:48:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-15 19:48:03] Further information can be found at the LHC@home message board.
[2026-03-15 19:48:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-15 19:48:03] Checking for apptainer binary...
[2026-03-15 19:48:03] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-15 19:48:03] Running /usr/bin/apptainer --version
[2026-03-15 19:48:03] apptainer version 1.4.5-2.el9
[2026-03-15 19:48:03] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-15 19:48:03] c-211-10.aglt2.org
[2026-03-15 19:48:03] apptainer works
[2026-03-15 19:48:03] Set ATHENA_PROC_NUMBER=8
[2026-03-15 19:48:03] Set ATHENA_CORE_NUMBER=8
[2026-03-15 19:48:03] Starting ATLAS job with PandaID=7056016851
[2026-03-15 19:48:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
20:04:43 (2914246): wrapper (7.7.26015): starting
20:04:43 (2914246): wrapper: running run_atlas (--nthreads 8)
[2026-03-15 20:04:43] Arguments: --nthreads 8
[2026-03-15 20:04:43] Threads: 8
[2026-03-15 20:04:43] This job has been restarted, cleaning up previous attempt
[2026-03-15 20:04:43] Checking for CVMFS
[2026-03-15 20:04:43] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-15 20:04:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-15 20:04:43] Running cvmfs_config stat atlas.cern.ch
[2026-03-15 20:04:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-15 20:04:43] 2.13.3.0 7202 115570 152372 157333 2 265 40216049 40960000 0 16776704 0 76324868 99.626 74506330 30333 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-15 20:04:43] CVMFS is ok
[2026-03-15 20:04:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-15 20:04:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-15 20:04:43] Further information can be found at the LHC@home message board.
[2026-03-15 20:04:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-15 20:04:43] Checking for apptainer binary...
[2026-03-15 20:04:43] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-15 20:04:43] Running /usr/bin/apptainer --version
[2026-03-15 20:04:43] apptainer version 1.4.5-2.el9
[2026-03-15 20:04:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-15 20:04:43] c-211-10.aglt2.org
[2026-03-15 20:04:43] apptainer works
[2026-03-15 20:04:43] Set ATHENA_PROC_NUMBER=8
[2026-03-15 20:04:43] Set ATHENA_CORE_NUMBER=8
[2026-03-15 20:04:43] Starting ATLAS job with PandaID=7056016851
[2026-03-15 20:04:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-15 21:46:04]  *** The last 200 lines of the pilot log: ***
[2026-03-15 21:46:04]  direct_access_wan=False
[2026-03-15 21:46:04]  domain=
[2026-03-15 21:46:04]  filesize=342128
[2026-03-15 21:46:04]  filetype=log
[2026-03-15 21:46:04]  guid=dc241076-4788-4ade-88ef-ec6568f8f972
[2026-03-15 21:46:04]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-15 21:46:04]  is_altstaged=None
[2026-03-15 21:46:04]  is_tar=False
[2026-03-15 21:46:04]  lfn=log.48967011._014905.job.log.tgz.1
[2026-03-15 21:46:04]  mtime=0
[2026-03-15 21:46:04]  protocol_id=None
[2026-03-15 21:46:04]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-15 21:46:04]  replicas=None
[2026-03-15 21:46:04]  scope=mc23_13p6TeV
[2026-03-15 21:46:04]  status=None
[2026-03-15 21:46:04]  status_code=0
[2026-03-15 21:46:04]  storage_token=
[2026-03-15 21:46:04]  surl=/tmp/boinchome/slots/3/PanDA_Pilot-7056016851/log.48967011._014905.job.log.tgz.1
[2026-03-15 21:46:04]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/cb/4e/log.48967011._014905.job.log.tgz.1
[2026-03-15 21:46:04]  workdir=None
[2026-03-15 21:46:04] ]
[2026-03-15 21:46:04] 2026-03-16 01:45:10,470 | INFO     | transferring file log.48967011._014905.job.log.tgz.1 from /tmp/boinchome/slots/3/PanDA_Pilot-7056016851/log.48967011._014905.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-03-15 21:46:04] 2026-03-16 01:45:10,470 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/3/PanDA_Pilot-7056016851/log.48967011._014905.job.log.tgz.1 /tmp/boinchome/slots/3/log.48967011._014905.job
[2026-03-15 21:46:04] 2026-03-16 01:45:10,485 | INFO     | adding to output.list: log.48967011._014905.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/cb/4e/log.48967011._014905.job.log.tg
[2026-03-15 21:46:04] 2026-03-16 01:45:10,486 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-15 21:46:04] 2026-03-16 01:45:10,486 | INFO     | summary of transferred files:
[2026-03-15 21:46:04] 2026-03-16 01:45:10,487 | INFO     |  -- lfn=log.48967011._014905.job.log.tgz.1, status_code=0, status=transferred
[2026-03-15 21:46:04] 2026-03-16 01:45:10,487 | INFO     | stage-out finished correctly
[2026-03-15 21:46:04] 2026-03-16 01:45:12,007 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-15 21:46:04] 2026-03-16 01:45:12,103 | INFO     | job 7056016851 has state=finished
[2026-03-15 21:46:04] 2026-03-16 01:45:12,103 | INFO     | preparing for final server update for job 7056016851 in state='finished'
[2026-03-15 21:46:04] 2026-03-16 01:45:12,104 | INFO     | reading metadata from: /tmp/boinchome/slots/3/PanDA_Pilot-7056016851/jobReport.json
[2026-03-15 21:46:04] 2026-03-16 01:45:12,106 | INFO     | time since job start (6023s) is within the limit (345600.0s)
[2026-03-15 21:46:04] 2026-03-16 01:45:12,107 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/3/workernode_map.json
[2026-03-15 21:46:04] 2026-03-16 01:45:12,107 | INFO     | this job has now completed (state=finished)
[2026-03-15 21:46:04] 2026-03-16 01:45:12,107 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-15 21:46:04] 2026-03-16 01:45:12,107 | INFO     | log transfer has been attempted: DONE
[2026-03-15 21:46:04] 2026-03-16 01:45:12,108 | INFO     | job 7056016851 has finished - writing final server update
[2026-03-15 21:46:04] 2026-03-16 01:45:12,108 | INFO     | total number of processed events: 400 (read)
[2026-03-15 21:46:04] 2026-03-16 01:45:12,117 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-7056016851/memory_monitor_summary.json (trf name=prmon)
[2026-03-15 21:46:04] 2026-03-16 01:45:12,118 | INFO     | extracted standard info from prmon json
[2026-03-15 21:46:04] 2026-03-16 01:45:12,118 | INFO     | extracted standard memory fields from prmon json
[2026-03-15 21:46:04] 2026-03-16 01:45:12,118 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-15 21:46:04] 2026-03-16 01:45:12,118 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-15 21:46:04] 2026-03-16 01:45:12,118 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-15 21:46:04] 2026-03-16 01:45:12,121 | INFO     | fitting pss+swap vs Time
[2026-03-15 21:46:04] 2026-03-16 01:45:12,121 | INFO     | sum of square deviations: 241429643.0
[2026-03-15 21:46:04] 2026-03-16 01:45:12,121 | INFO     | sum of deviations: -9171419997.5
[2026-03-15 21:46:04] 2026-03-16 01:45:12,122 | INFO     | mean x: 1773622587.5
[2026-03-15 21:46:04] 2026-03-16 01:45:12,122 | INFO     | mean y: 2603328.4239130435
[2026-03-15 21:46:04] 2026-03-16 01:45:12,122 | INFO     | intersect: 67378910002.642845
[2026-03-15 21:46:04] 2026-03-16 01:45:12,122 | INFO     | chi2: 0.12892884954137945
[2026-03-15 21:46:04] 2026-03-16 01:45:12,122 | INFO     | current memory leak: -37.99 B/s (using 92 data points, chi2=0.13)
[2026-03-15 21:46:04] 2026-03-16 01:45:12,123 | INFO     | could have reported an average CPU frequency of 3020 MHz (7 samples)
[2026-03-15 21:46:04] 2026-03-16 01:45:12,123 | INFO     | ..............................
[2026-03-15 21:46:04] 2026-03-16 01:45:12,123 | INFO     | . Timing measurements:
[2026-03-15 21:46:04] 2026-03-16 01:45:12,123 | INFO     | . get job = 0 s
[2026-03-15 21:46:04] 2026-03-16 01:45:12,123 | INFO     | . initial setup = 0 s
[2026-03-15 21:46:04] 2026-03-16 01:45:12,123 | INFO     | . payload setup = 3 s
[2026-03-15 21:46:04] 2026-03-16 01:45:12,123 | INFO     | . stage-in = 0 s
[2026-03-15 21:46:04] 2026-03-16 01:45:12,124 | INFO     | . payload execution = 6001 s
[2026-03-15 21:46:04] 2026-03-16 01:45:12,124 | INFO     | . stage-out = 1 s
[2026-03-15 21:46:04] 2026-03-16 01:45:12,124 | INFO     | . log creation = 0 s
[2026-03-15 21:46:04] 2026-03-16 01:45:12,124 | INFO     | ..............................
[2026-03-15 21:46:04] 2026-03-16 01:45:12,221 | INFO     | 
[2026-03-15 21:46:04] 2026-03-16 01:45:12,221 | INFO     | job summary report
[2026-03-15 21:46:04] 2026-03-16 01:45:12,221 | INFO     | --------------------------------------------------
[2026-03-15 21:46:04] 2026-03-16 01:45:12,222 | INFO     | PanDA job id: 7056016851
[2026-03-15 21:46:04] 2026-03-16 01:45:12,222 | INFO     | task id: 48967011
[2026-03-15 21:46:04] 2026-03-16 01:45:12,222 | INFO     | errors: (none)
[2026-03-15 21:46:04] 2026-03-16 01:45:12,222 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-15 21:46:04] 2026-03-16 01:45:12,222 | INFO     | pilot state: finished 
[2026-03-15 21:46:04] 2026-03-16 01:45:12,222 | INFO     | transexitcode: 0
[2026-03-15 21:46:04] 2026-03-16 01:45:12,222 | INFO     | exeerrorcode: 0
[2026-03-15 21:46:04] 2026-03-16 01:45:12,222 | INFO     | exeerrordiag: 
[2026-03-15 21:46:04] 2026-03-16 01:45:12,223 | INFO     | exitcode: 0
[2026-03-15 21:46:04] 2026-03-16 01:45:12,223 | INFO     | exitmsg: OK
[2026-03-15 21:46:04] 2026-03-16 01:45:12,223 | INFO     | cpuconsumptiontime: 45132 s
[2026-03-15 21:46:04] 2026-03-16 01:45:12,223 | INFO     | nevents: 400
[2026-03-15 21:46:04] 2026-03-16 01:45:12,223 | INFO     | neventsw: 0
[2026-03-15 21:46:04] 2026-03-16 01:45:12,223 | INFO     | pid: 2938883
[2026-03-15 21:46:04] 2026-03-16 01:45:12,223 | INFO     | pgrp: 2938883
[2026-03-15 21:46:04] 2026-03-16 01:45:12,223 | INFO     | corecount: 8
[2026-03-15 21:46:04] 2026-03-16 01:45:12,223 | INFO     | event service: False
[2026-03-15 21:46:04] 2026-03-16 01:45:12,224 | INFO     | sizes: {0: 2280244, 11: 2280244, 6008: 2307061, 6010: 2316059, 6011: 2316309}
[2026-03-15 21:46:04] 2026-03-16 01:45:12,224 | INFO     | --------------------------------------------------
[2026-03-15 21:46:04] 2026-03-16 01:45:12,224 | INFO     | 
[2026-03-15 21:46:04] 2026-03-16 01:45:12,224 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2026-03-15 21:46:04] 2026-03-16 01:45:12,241 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-15 21:46:04] 2026-03-16 01:45:12,241 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-15 21:46:04] 2026-03-16 01:45:12,242 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-15 21:46:04] 2026-03-16 01:45:12,242 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-15 21:46:04] 2026-03-16 01:45:12,242 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-15 21:46:04] 2026-03-16 01:45:12,242 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-15 21:46:04] 2026-03-16 01:45:12,242 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-15 21:46:04] 2026-03-16 01:45:12,242 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-15 21:46:04] 2026-03-16 01:45:12,242 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-15 21:46:04] 2026-03-16 01:45:12,242 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-15 21:46:04] 2026-03-16 01:45:12,243 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-15 21:46:04] 2026-03-16 01:45:12,243 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-15 21:46:04] 2026-03-16 01:45:12,243 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-15 21:46:04] 2026-03-16 01:45:12,243 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-15 21:46:04] 2026-03-16 01:45:12,243 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-15 21:46:04] 2026-03-16 01:45:12,243 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-15 21:46:04] 2026-03-16 01:45:12,243 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-15 21:46:04] 2026-03-16 01:45:12,243 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-15 21:46:04] 2026-03-16 01:45:12,244 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-15 21:46:04] 2026-03-16 01:45:12,244 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-15 21:46:04] 2026-03-16 01:45:12,244 | INFO     | job 7056016851 has completed (purged errors)
[2026-03-15 21:46:04] 2026-03-16 01:45:12,244 | INFO     | overall cleanup function is called
[2026-03-15 21:46:04] 2026-03-16 01:45:13,252 | INFO     | --- collectZombieJob: --- 10, [2938883]
[2026-03-15 21:46:04] 2026-03-16 01:45:13,252 | INFO     | zombie collector waiting for pid 2938883
[2026-03-15 21:46:04] 2026-03-16 01:45:13,252 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-15 21:46:04] 2026-03-16 01:45:13,253 | INFO     | collected zombie processes
[2026-03-15 21:46:04] 2026-03-16 01:45:13,253 | INFO     | will attempt to kill all subprocesses of pid=2938883
[2026-03-15 21:46:04] 2026-03-16 01:45:13,512 | INFO     | process IDs to be killed: [2938883] (in reverse order)
[2026-03-15 21:46:04] 2026-03-16 01:45:13,582 | WARNING  | found no corresponding commands to process id(s)
[2026-03-15 21:46:04] 2026-03-16 01:45:13,582 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-15 21:46:04] 2026-03-16 01:45:13,589 | INFO     | did not find any defunct processes belonging to 2938883
[2026-03-15 21:46:04] 2026-03-16 01:45:13,594 | INFO     | did not find any defunct processes belonging to 2938883
[2026-03-15 21:46:04] 2026-03-16 01:45:13,595 | INFO     | ready for new job
[2026-03-15 21:46:04] 2026-03-16 01:45:13,595 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-15 21:46:04] 2026-03-16 01:45:13,596 | INFO     | **************************************
[2026-03-15 21:46:04] 2026-03-16 01:45:13,597 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-15 21:46:04] 2026-03-16 01:45:13,597 | INFO     | **************************************
[2026-03-15 21:46:04] 2026-03-16 01:45:13,597 | INFO     | 
[2026-03-15 21:46:04] 2026-03-16 01:45:13,600 | INFO     | architecture information:
[2026-03-15 21:46:04] 2026-03-16 01:45:13,600 | INFO     | executing command: cat /etc/os-release
[2026-03-15 21:46:04] 2026-03-16 01:45:13,612 | INFO     | cat /etc/os-release:
[2026-03-15 21:46:04] NAME="CentOS Linux"
[2026-03-15 21:46:04] VERSION="7 (Core)"
[2026-03-15 21:46:04] ID="centos"
[2026-03-15 21:46:04] ID_LIKE="rhel fedora"
[2026-03-15 21:46:04] VERSION_ID="7"
[2026-03-15 21:46:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-15 21:46:04] ANSI_COLOR="0;31"
[2026-03-15 21:46:04] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-15 21:46:04] HOME_URL="https://www.centos.org/"
[2026-03-15 21:46:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-15 21:46:04] 
[2026-03-15 21:46:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-15 21:46:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-15 21:46:04] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-15 21:46:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-15 21:46:04] 
[2026-03-15 21:46:04] 2026-03-16 01:45:13,613 | INFO     | **************************************
[2026-03-15 21:46:04] 2026-03-16 01:45:14,115 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2026-03-15 21:46:04] 2026-03-16 01:45:14,129 | INFO     | sufficient remaining disk space (62058921984 B)
[2026-03-15 21:46:04] 2026-03-16 01:45:14,129 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-15 21:46:04] 2026-03-16 01:45:14,129 | INFO     | current server update state: UPDATING_FINAL
[2026-03-15 21:46:04] 2026-03-16 01:45:14,130 | INFO     | update_server=False
[2026-03-15 21:46:04] 2026-03-16 01:45:14,130 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-15 21:46:04] 2026-03-16 01:45:14,130 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-15 21:46:04] 2026-03-16 01:45:14,130 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-15 21:46:04] 2026-03-16 01:45:14,130 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-15 21:46:04] 2026-03-16 01:45:14,130 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-15 21:46:04] 2026-03-16 01:45:14,131 | INFO     | aborting loop
[2026-03-15 21:46:04] 2026-03-16 01:45:14,480 | INFO     | all payload control threads have been joined
[2026-03-15 21:46:04] 2026-03-16 01:45:14,876 | INFO     | all data control threads have been joined
[2026-03-15 21:46:04] 2026-03-16 01:45:14,982 | INFO     | all job control threads have been joined
[2026-03-15 21:46:04] 2026-03-16 01:45:15,132 | INFO     | [job] retrieve thread has finished
[2026-03-15 21:46:04] 2026-03-16 01:45:15,136 | INFO     | [job] job monitor thread has finished
[2026-03-15 21:46:04] 2026-03-16 01:45:15,137 | INFO     | [job] queue monitor thread has finished
[2026-03-15 21:46:04] 2026-03-16 01:45:15,482 | INFO     | [payload] control thread has finished
[2026-03-15 21:46:04] 2026-03-16 01:45:15,652 | INFO     | [payload] execute_payloads thread has finished
[2026-03-15 21:46:04] 2026-03-16 01:45:15,678 | INFO     | [job] create_data_payload thread has finished
[2026-03-15 21:46:04] 2026-03-16 01:45:15,857 | INFO     | [job] validate thread has finished
[2026-03-15 21:46:04] 2026-03-16 01:45:15,882 | INFO     | [data] control thread has finished
[2026-03-15 21:46:04] 2026-03-16 01:45:15,969 | INFO     | [data] copytool_in thread has finished
[2026-03-15 21:46:04] 2026-03-16 01:45:15,983 | INFO     | [payload] failed_post thread has finished
[2026-03-15 21:46:04] 2026-03-16 01:45:15,988 | INFO     | [job] control thread has finished
[2026-03-15 21:46:04] 2026-03-16 01:45:16,136 | INFO     | [data] copytool_out thread has finished
[2026-03-15 21:46:04] 2026-03-16 01:45:16,192 | INFO     | [payload] validate_pre thread has finished
[2026-03-15 21:46:04] 2026-03-16 01:45:16,507 | INFO     | [payload] validate_post thread has finished
[2026-03-15 21:46:04] 2026-03-16 01:45:18,136 | INFO     | [data] queue_monitor thread has finished
[2026-03-15 21:46:04] 2026-03-16 01:45:24,762 | INFO     | job.realtimelogging is not enabled
[2026-03-15 21:46:04] 2026-03-16 01:45:25,767 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-15 21:46:04] 2026-03-16 01:45:45,500 | INFO     | PID=2929400 has CPU usage=6.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-15 21:46:04] 2026-03-16 01:45:45,501 | INFO     | .. there are 5 such processes running
[2026-03-15 21:46:04] 2026-03-16 01:45:45,501 | INFO     | found 0 job(s) in 20 queues
[2026-03-15 21:46:04] 2026-03-16 01:45:45,502 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-15 21:46:04] 2026-03-16 01:45:45,502 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-15 21:46:04] 2026-03-16 01:45:57,846 | INFO     | [monitor] cgroup control has ended
[2026-03-15 21:46:04] 2026-03-16 01:45:59,077 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139972428670784)>', '<ExcThread(monitor, started 139972078188288)>']
[2026-03-15 21:46:04] 2026-03-16 01:45:59,565 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-15 21:46:04] 2026-03-16 01:45:59,565 | INFO     | [monitor] control thread has ended
[2026-03-15 21:46:04] 2026-03-16 01:46:04,103 | INFO     | all workflow threads have been joined
[2026-03-15 21:46:04] 2026-03-16 01:46:04,104 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-15 21:46:04] 2026-03-16 01:46:04,104 | INFO     | traces error code: 0
[2026-03-15 21:46:04] 2026-03-16 01:46:04,104 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-15 21:46:04] 2026-03-16 01:46:04,206 [wrapper] ==== pilot stdout END ====
[2026-03-15 21:46:04] 2026-03-16 01:46:04,208 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-15 21:46:04] 2026-03-16 01:46:04,211 [wrapper] pilotpid: 2929400
[2026-03-15 21:46:04] 2026-03-16 01:46:04,213 [wrapper] Pilot exit status: 0
[2026-03-15 21:46:04] 2026-03-16 01:46:04,221 [wrapper] pandaids: 7056016851 7056016851
[2026-03-15 21:46:04] 2026-03-16 01:46:04,265 [wrapper] cleanup supervisor_pilot 3121774 2929404
[2026-03-15 21:46:04] 2026-03-16 01:46:04,267 [wrapper] Test setup, not cleaning
[2026-03-15 21:46:04] 2026-03-16 01:46:04,269 [wrapper] apfmon messages muted
[2026-03-15 21:46:04] 2026-03-16 01:46:04,272 [wrapper] ==== wrapper stdout END ====
[2026-03-15 21:46:04] 2026-03-16 01:46:04,274 [wrapper] ==== wrapper stderr END ====
[2026-03-15 21:46:04]  *** Error codes and diagnostics ***
[2026-03-15 21:46:04]     "exeErrorCode": 0,
[2026-03-15 21:46:04]     "exeErrorDiag": "",
[2026-03-15 21:46:04]     "pilotErrorCode": 0,
[2026-03-15 21:46:04]     "pilotErrorDiag": "",
[2026-03-15 21:46:04]  *** Listing of results directory ***
[2026-03-15 21:46:04] total 630208
[2026-03-15 21:46:04] drwx------. 5 boincer umatlas      4096 Mar 10 12:00 pilot3
[2026-03-15 21:46:04] -rw-r--r--. 1 boincer umatlas      5111 Mar 15 12:37 queuedata.json
[2026-03-15 21:46:04] -rwx------. 1 boincer umatlas     36322 Mar 15 12:38 runpilot2-wrapper.sh
[2026-03-15 21:46:04] -rw-r--r--. 1 boincer umatlas    585013 Mar 15 12:38 pilot3.tar.gz
[2026-03-15 21:46:04] -rw-r--r--. 1 boincer umatlas       100 Mar 15 19:48 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-15 21:46:04] -rwxr-xr-x. 1 boincer umatlas      7986 Mar 15 19:48 run_atlas
[2026-03-15 21:46:04] -rw-r--r--. 1 boincer umatlas       105 Mar 15 19:48 job.xml
[2026-03-15 21:46:04] -rw-r--r--. 3 boincer umatlas 217201758 Mar 15 19:48 EVNT.48967008._000573.pool.root.1
[2026-03-15 21:46:04] -rw-r--r--. 3 boincer umatlas 217201758 Mar 15 19:48 ATLAS.root_0
[2026-03-15 21:46:04] drwxrwx--x. 2 boincer umatlas      4096 Mar 15 19:48 shared
[2026-03-15 21:46:04] -rw-r--r--. 2 boincer umatlas    597524 Mar 15 19:48 input.tar.gz
[2026-03-15 21:46:04] -rw-r--r--. 2 boincer umatlas     15845 Mar 15 19:48 start_atlas.sh
[2026-03-15 21:46:04] -rw-r--r--. 1 boincer umatlas         0 Mar 15 19:48 boinc_lockfile
[2026-03-15 21:46:04] -rw-------. 1 boincer umatlas   1511579 Mar 15 19:48 agis_ddmendpoints.agis.ALL.json
[2026-03-15 21:46:04] -rw-r--r--. 1 boincer umatlas      2565 Mar 15 20:04 pandaJob.out
[2026-03-15 21:46:04] -rw-------. 1 boincer umatlas        57 Mar 15 20:04 setup.sh.local
[2026-03-15 21:46:04] -rw-------. 1 boincer umatlas   1006471 Mar 15 20:04 agis_schedconf.cvmfs.json
[2026-03-15 21:46:04] -rw-------. 1 boincer umatlas       442 Mar 15 20:04 workernode_map.json
[2026-03-15 21:46:04] -rw-------. 1 boincer umatlas 204567237 Mar 15 21:44 HITS.48967011._014905.pool.root.1
[2026-03-15 21:46:04] -rw-r--r--. 1 boincer umatlas       529 Mar 15 21:44 boinc_task_state.xml
[2026-03-15 21:46:04] -rw-------. 1 boincer umatlas      1043 Mar 15 21:45 memory_monitor_summary.json
[2026-03-15 21:46:04] -rw-------. 1 boincer umatlas    342128 Mar 15 21:45 log.48967011._014905.job.log.tgz.1
[2026-03-15 21:46:04] -rw-------. 1 boincer umatlas      6376 Mar 15 21:45 heartbeat.json
[2026-03-15 21:46:04] -rw-------. 1 boincer umatlas        96 Mar 15 21:45 pilot_heartbeat.json
[2026-03-15 21:46:04] -rw-r--r--. 1 boincer umatlas      6615 Mar 15 21:45 init_data.xml
[2026-03-15 21:46:04] -rw-r--r--. 1 boincer umatlas      8192 Mar 15 21:45 boinc_mmap_file
[2026-03-15 21:46:04] -rw-r--r--. 1 boincer umatlas        27 Mar 15 21:46 wrapper_checkpoint.txt
[2026-03-15 21:46:04] -rw-------. 1 boincer umatlas      4891 Mar 15 21:46 pilotlog.txt
[2026-03-15 21:46:04] -rw-------. 1 boincer umatlas    869952 Mar 15 21:46 log.48967011._014905.job.log.1
[2026-03-15 21:46:04] -rw-------. 1 boincer umatlas       357 Mar 15 21:46 output.list
[2026-03-15 21:46:04] -rw-r--r--. 1 boincer umatlas       620 Mar 15 21:46 runtime_log
[2026-03-15 21:46:04] -rw-------. 1 boincer umatlas   1228800 Mar 15 21:46 result.tar.gz
[2026-03-15 21:46:04] -rw-------. 1 boincer umatlas       775 Mar 15 21:46 SBQKDmze3L9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmkJvLDmZa2a9m.diag
[2026-03-15 21:46:04] -rw-r--r--. 1 boincer umatlas      9426 Mar 15 21:46 runtime_log.err
[2026-03-15 21:46:04] -rw-r--r--. 1 boincer umatlas     23151 Mar 15 21:46 stderr.txt
[2026-03-15 21:46:04] HITS file was successfully produced:
[2026-03-15 21:46:04] -rw-------. 1 boincer umatlas 204567237 Mar 15 21:44 shared/HITS.pool.root.1
[2026-03-15 21:46:04]  *** Contents of shared directory: ***
[2026-03-15 21:46:04] total 413692
[2026-03-15 21:46:04] -rw-r--r--. 3 boincer umatlas 217201758 Mar 15 19:48 ATLAS.root_0
[2026-03-15 21:46:04] -rw-r--r--. 2 boincer umatlas    597524 Mar 15 19:48 input.tar.gz
[2026-03-15 21:46:04] -rw-r--r--. 2 boincer umatlas     15845 Mar 15 19:48 start_atlas.sh
[2026-03-15 21:46:04] -rw-------. 1 boincer umatlas 204567237 Mar 15 21:44 HITS.pool.root.1
[2026-03-15 21:46:04] -rw-------. 1 boincer umatlas   1228800 Mar 15 21:46 result.tar.gz
21:46:06 (2914246): run_atlas exited; CPU time 45340.579611
21:46:06 (2914246): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN