Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:03:01 (27945): wrapper (7.7.26015): starting
11:03:01 (27945): wrapper: running run_atlas (--nthreads 8)
[2026-03-18 11:03:01] Arguments: --nthreads 8
[2026-03-18 11:03:01] Threads: 8
[2026-03-18 11:03:01] Checking for CVMFS
[2026-03-18 11:03:01] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-18 11:03:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-18 11:03:04] Running cvmfs_config stat atlas.cern.ch
[2026-03-18 11:03:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-18 11:03:04] 2.11.2.0 24514 133191 140148 157409 1 77 18564365 25165825 4520 130560 153 44758991 99.835 30620701 1078 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-03-18 11:03:04] CVMFS is ok
[2026-03-18 11:03:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-18 11:03:04] Checking for apptainer binary...
[2026-03-18 11:03:04] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-18 11:03:04] Running /usr/bin/apptainer --version
[2026-03-18 11:03:04] apptainer version 1.3.2-1.el7
[2026-03-18 11:03:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-18 11:03:21] cg-vwn473.simple-grid.lan
[2026-03-18 11:03:21] apptainer works
[2026-03-18 11:03:21] Set ATHENA_PROC_NUMBER=8
[2026-03-18 11:03:21] Set ATHENA_CORE_NUMBER=8
[2026-03-18 11:03:21] Starting ATLAS job with PandaID=7055958620
[2026-03-18 11:03:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/18 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-21 00:44:55]  *** The last 200 lines of the pilot log: ***
[2026-03-21 00:44:55] 2026-03-20 23:44:14,824 | WARNING  | aborting job monitor tasks since payload process 4141 is not running
[2026-03-21 00:44:55] 2026-03-20 23:44:14,870 | INFO     | adding to output.list: log.49149347._000002.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc16_13TeV/db/ab/log.49149347._000002.job.log.tgz.
[2026-03-21 00:44:55] 2026-03-20 23:44:14,871 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-21 00:44:55] 2026-03-20 23:44:14,871 | INFO     | summary of transferred files:
[2026-03-21 00:44:55] 2026-03-20 23:44:14,871 | INFO     |  -- lfn=log.49149347._000002.job.log.tgz.1, status_code=0, status=transferred
[2026-03-21 00:44:55] 2026-03-20 23:44:14,871 | INFO     | stage-out finished correctly
[2026-03-21 00:44:55] 2026-03-20 23:44:15,005 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-21 00:44:55] 2026-03-20 23:44:15,491 | INFO     | job 7055958620 has state=finished
[2026-03-21 00:44:55] 2026-03-20 23:44:15,492 | INFO     | preparing for final server update for job 7055958620 in state='finished'
[2026-03-21 00:44:55] 2026-03-20 23:44:15,492 | INFO     | reading metadata from: /var/lib/boinc/slots/18/PanDA_Pilot-7055958620/jobReport.json
[2026-03-21 00:44:55] 2026-03-20 23:44:15,494 | INFO     | added worker_node to metadata from /var/lib/boinc/slots/18/workernode_map.json
[2026-03-21 00:44:55] 2026-03-20 23:44:15,494 | INFO     | this job has now completed (state=finished)
[2026-03-21 00:44:55] 2026-03-20 23:44:15,494 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-21 00:44:55] 2026-03-20 23:44:15,495 | INFO     | log transfer has been attempted: DONE
[2026-03-21 00:44:55] 2026-03-20 23:44:15,495 | INFO     | job 7055958620 has finished - writing final server update
[2026-03-21 00:44:55] 2026-03-20 23:44:15,495 | INFO     | total number of processed events: 2050 (read)
[2026-03-21 00:44:55] 2026-03-20 23:44:15,497 | INFO     | using path: /var/lib/boinc/slots/18/PanDA_Pilot-7055958620/memory_monitor_summary.json (trf name=prmon)
[2026-03-21 00:44:55] 2026-03-20 23:44:15,497 | INFO     | extracted standard info from prmon json
[2026-03-21 00:44:55] 2026-03-20 23:44:15,497 | INFO     | extracted standard memory fields from prmon json
[2026-03-21 00:44:55] 2026-03-20 23:44:15,497 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-21 00:44:55] 2026-03-20 23:44:15,563 | INFO     | fitting pss+swap vs Time
[2026-03-21 00:44:55] 2026-03-20 23:44:15,568 | INFO     | sum of square deviations: 14819684950239.396
[2026-03-21 00:44:55] 2026-03-20 23:44:16,060 | INFO     | sum of deviations: 22023246938612.586
[2026-03-21 00:44:55] 2026-03-20 23:44:16,060 | INFO     | mean x: 1773939588.1157343
[2026-03-21 00:44:55] 2026-03-20 23:44:16,060 | INFO     | mean y: 2995481.9272526866
[2026-03-21 00:44:55] 2026-03-20 23:44:16,061 | INFO     | intersect: -2633221801.667728
[2026-03-21 00:44:55] 2026-03-20 23:44:16,064 | INFO     | chi2: 31.520230797508592
[2026-03-21 00:44:55] 2026-03-20 23:44:16,069 | INFO     | sum of square deviations: 14758515252198.154
[2026-03-21 00:44:55] 2026-03-20 23:44:16,109 | INFO     | time since job start (221698s) is within the limit (345600.0s)
[2026-03-21 00:44:55] 2026-03-20 23:44:16,463 | INFO     | sum of deviations: 23343946243000.344
[2026-03-21 00:44:55] 2026-03-20 23:44:16,463 | INFO     | mean x: 1773939435.6172738
[2026-03-21 00:44:55] 2026-03-20 23:44:16,464 | INFO     | mean y: 2998774.1848785873
[2026-03-21 00:44:55] 2026-03-20 23:44:16,464 | INFO     | intersect: -2802889630.966191
[2026-03-21 00:44:55] 2026-03-20 23:44:16,467 | INFO     | chi2: 28.140180424458755
[2026-03-21 00:44:55] 2026-03-20 23:44:16,468 | INFO     | current chi2=28.140180424458755 (change=10.723431547071671 %)
[2026-03-21 00:44:55] 2026-03-20 23:44:16,468 | INFO     | right removable region: 3623
[2026-03-21 00:44:55] 2026-03-20 23:44:16,472 | INFO     | sum of square deviations: 14758512782308.168
[2026-03-21 00:44:55] 2026-03-20 23:44:16,832 | INFO     | sum of deviations: 20383146953007.195
[2026-03-21 00:44:55] 2026-03-20 23:44:16,833 | INFO     | mean x: 1773939740.6172738
[2026-03-21 00:44:55] 2026-03-20 23:44:16,833 | INFO     | mean y: 2999570.6360375276
[2026-03-21 00:44:55] 2026-03-20 23:44:16,833 | INFO     | intersect: -2447008431.6693497
[2026-03-21 00:44:55] 2026-03-20 23:44:16,836 | INFO     | chi2: 26.584194838988584
[2026-03-21 00:44:55] 2026-03-20 23:44:16,836 | INFO     | current chi2=26.584194838988584 (change=15.659897892975327 %)
[2026-03-21 00:44:55] 2026-03-20 23:44:16,837 | INFO     | left removable region: 10
[2026-03-21 00:44:55] 2026-03-20 23:44:16,841 | INFO     | sum of square deviations: 14624529985055.387
[2026-03-21 00:44:55] 2026-03-20 23:44:17,253 | INFO     | sum of deviations: 20419296168625.145
[2026-03-21 00:44:55] 2026-03-20 23:44:17,253 | INFO     | mean x: 1773939710.1206753
[2026-03-21 00:44:55] 2026-03-20 23:44:17,253 | INFO     | mean y: 3007283.4284528093
[2026-03-21 00:44:55] 2026-03-20 23:44:17,253 | INFO     | intersect: -2473831313.316502
[2026-03-21 00:44:55] 2026-03-20 23:44:17,257 | INFO     | chi2: 18.4474742405089
[2026-03-21 00:44:55] 2026-03-20 23:44:17,258 | INFO     | current memory leak: 1.40 B/s (using 3613 data points, chi2=18.45)
[2026-03-21 00:44:55] 2026-03-20 23:44:17,260 | INFO     | could have reported an average CPU frequency of 2249 MHz (126 samples)
[2026-03-21 00:44:55] 2026-03-20 23:44:17,261 | INFO     | ..............................
[2026-03-21 00:44:55] 2026-03-20 23:44:17,261 | INFO     | . Timing measurements:
[2026-03-21 00:44:55] 2026-03-20 23:44:17,261 | INFO     | . get job = 0 s
[2026-03-21 00:44:55] 2026-03-20 23:44:17,261 | INFO     | . initial setup = 120 s
[2026-03-21 00:44:55] 2026-03-20 23:44:17,261 | INFO     | . payload setup = 244 s
[2026-03-21 00:44:55] 2026-03-20 23:44:17,261 | INFO     | . stage-in = 0 s
[2026-03-21 00:44:55] 2026-03-20 23:44:17,261 | INFO     | . payload execution = 221427 s
[2026-03-21 00:44:55] 2026-03-20 23:44:17,261 | INFO     | . stage-out = 5 s
[2026-03-21 00:44:55] 2026-03-20 23:44:17,261 | INFO     | . log creation = 2 s
[2026-03-21 00:44:55] 2026-03-20 23:44:17,261 | INFO     | ..............................
[2026-03-21 00:44:55] 2026-03-20 23:44:17,369 | INFO     | 
[2026-03-21 00:44:55] 2026-03-20 23:44:17,369 | INFO     | job summary report
[2026-03-21 00:44:55] 2026-03-20 23:44:17,369 | INFO     | --------------------------------------------------
[2026-03-21 00:44:55] 2026-03-20 23:44:17,370 | INFO     | PanDA job id: 7055958620
[2026-03-21 00:44:55] 2026-03-20 23:44:17,370 | INFO     | task id: 49149347
[2026-03-21 00:44:55] 2026-03-20 23:44:17,370 | INFO     | errors: (none)
[2026-03-21 00:44:55] 2026-03-20 23:44:17,370 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-21 00:44:55] 2026-03-20 23:44:17,370 | INFO     | pilot state: finished 
[2026-03-21 00:44:55] 2026-03-20 23:44:17,370 | INFO     | transexitcode: 0
[2026-03-21 00:44:55] 2026-03-20 23:44:17,370 | INFO     | exeerrorcode: 0
[2026-03-21 00:44:55] 2026-03-20 23:44:17,370 | INFO     | exeerrordiag: 
[2026-03-21 00:44:55] 2026-03-20 23:44:17,370 | INFO     | exitcode: 0
[2026-03-21 00:44:55] 2026-03-20 23:44:17,370 | INFO     | exitmsg: OK
[2026-03-21 00:44:55] 2026-03-20 23:44:17,370 | INFO     | cpuconsumptiontime: 842886 s
[2026-03-21 00:44:55] 2026-03-20 23:44:17,370 | INFO     | nevents: 2050
[2026-03-21 00:44:55] 2026-03-20 23:44:17,370 | INFO     | neventsw: 0
[2026-03-21 00:44:55] 2026-03-20 23:44:17,371 | INFO     | pid: 4141
[2026-03-21 00:44:55] 2026-03-20 23:44:17,371 | INFO     | pgrp: 4141
[2026-03-21 00:44:55] 2026-03-20 23:44:17,371 | INFO     | corecount: 8
[2026-03-21 00:44:55] 2026-03-20 23:44:17,371 | INFO     | event service: False
[2026-03-21 00:44:55] 2026-03-20 23:44:17,371 | INFO     | sizes: {0: 2280508, 1: 2280969, 12: 2280969, 221676: 2409740, 221677: 2409739, 221684: 2418979, 221686: 2419169}
[2026-03-21 00:44:55] 2026-03-20 23:44:17,371 | INFO     | --------------------------------------------------
[2026-03-21 00:44:55] 2026-03-20 23:44:17,371 | INFO     | 
[2026-03-21 00:44:55] 2026-03-20 23:44:17,371 | INFO     | executing command: ls -lF /var/lib/boinc/slots/18
[2026-03-21 00:44:55] 2026-03-20 23:44:17,480 | INFO     | PID=32011 has CPU usage=23.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-21 00:44:55] 2026-03-20 23:44:17,480 | INFO     | .. there are 9 such processes running
[2026-03-21 00:44:55] 2026-03-20 23:44:17,984 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-21 00:44:55] 2026-03-20 23:44:17,984 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-21 00:44:55] 2026-03-20 23:44:17,984 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-21 00:44:55] 2026-03-20 23:44:17,984 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-21 00:44:55] 2026-03-20 23:44:17,984 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-21 00:44:55] 2026-03-20 23:44:17,984 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-21 00:44:55] 2026-03-20 23:44:17,984 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-21 00:44:55] 2026-03-20 23:44:17,984 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-21 00:44:55] 2026-03-20 23:44:17,984 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-21 00:44:55] 2026-03-20 23:44:17,985 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-21 00:44:55] 2026-03-20 23:44:17,985 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-21 00:44:55] 2026-03-20 23:44:17,985 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-21 00:44:55] 2026-03-20 23:44:17,985 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-21 00:44:55] 2026-03-20 23:44:17,985 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-21 00:44:55] 2026-03-20 23:44:17,985 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-21 00:44:55] 2026-03-20 23:44:17,985 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-21 00:44:55] 2026-03-20 23:44:17,985 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-21 00:44:55] 2026-03-20 23:44:17,985 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-21 00:44:55] 2026-03-20 23:44:17,985 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-21 00:44:55] 2026-03-20 23:44:17,985 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-21 00:44:55] 2026-03-20 23:44:17,986 | INFO     | job 7055958620 has completed (purged errors)
[2026-03-21 00:44:55] 2026-03-20 23:44:17,986 | INFO     | overall cleanup function is called
[2026-03-21 00:44:55] 2026-03-20 23:44:19,005 | INFO     | --- collectZombieJob: --- 10, [4141]
[2026-03-21 00:44:55] 2026-03-20 23:44:19,005 | INFO     | zombie collector waiting for pid 4141
[2026-03-21 00:44:55] 2026-03-20 23:44:19,005 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-21 00:44:55] 2026-03-20 23:44:19,006 | INFO     | collected zombie processes
[2026-03-21 00:44:55] 2026-03-20 23:44:19,006 | INFO     | will attempt to kill all subprocesses of pid=4141
[2026-03-21 00:44:55] 2026-03-20 23:44:19,089 | INFO     | process IDs to be killed: [4141] (in reverse order)
[2026-03-21 00:44:55] 2026-03-20 23:44:19,825 | WARNING  | found no corresponding commands to process id(s)
[2026-03-21 00:44:55] 2026-03-20 23:44:19,825 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-21 00:44:55] 2026-03-20 23:44:19,828 | INFO     | did not find any defunct processes belonging to 4141
[2026-03-21 00:44:55] 2026-03-20 23:44:19,830 | INFO     | did not find any defunct processes belonging to 4141
[2026-03-21 00:44:55] 2026-03-20 23:44:19,831 | INFO     | ready for new job
[2026-03-21 00:44:55] 2026-03-20 23:44:19,831 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-21 00:44:55] 2026-03-20 23:44:19,842 | INFO     | **************************************
[2026-03-21 00:44:55] 2026-03-20 23:44:19,842 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-21 00:44:55] 2026-03-20 23:44:19,842 | INFO     | **************************************
[2026-03-21 00:44:55] 2026-03-20 23:44:19,842 | INFO     | 
[2026-03-21 00:44:55] 2026-03-20 23:44:19,842 | INFO     | pilot is running in a VM
[2026-03-21 00:44:55] 2026-03-20 23:44:19,843 | INFO     | architecture information:
[2026-03-21 00:44:55] 2026-03-20 23:44:19,848 | INFO     | executing command: cat /etc/os-release
[2026-03-21 00:44:55] 2026-03-20 23:44:20,013 | INFO     | cat /etc/os-release:
[2026-03-21 00:44:55] NAME="CentOS Linux"
[2026-03-21 00:44:55] VERSION="7 (Core)"
[2026-03-21 00:44:55] ID="centos"
[2026-03-21 00:44:55] ID_LIKE="rhel fedora"
[2026-03-21 00:44:55] VERSION_ID="7"
[2026-03-21 00:44:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-21 00:44:55] ANSI_COLOR="0;31"
[2026-03-21 00:44:55] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-21 00:44:55] HOME_URL="https://www.centos.org/"
[2026-03-21 00:44:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-21 00:44:55] 
[2026-03-21 00:44:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-21 00:44:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-21 00:44:55] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-21 00:44:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-21 00:44:55] 
[2026-03-21 00:44:55] 2026-03-20 23:44:20,013 | INFO     | **************************************
[2026-03-21 00:44:55] 2026-03-20 23:44:20,515 | INFO     | executing command: df -mP /var/lib/boinc/slots/18
[2026-03-21 00:44:55] 2026-03-20 23:44:20,726 | INFO     | sufficient remaining disk space (493472448512 B)
[2026-03-21 00:44:55] 2026-03-20 23:44:20,726 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-21 00:44:55] 2026-03-20 23:44:20,726 | INFO     | current server update state: UPDATING_FINAL
[2026-03-21 00:44:55] 2026-03-20 23:44:20,726 | INFO     | update_server=False
[2026-03-21 00:44:55] 2026-03-20 23:44:20,726 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-21 00:44:55] 2026-03-20 23:44:20,730 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-21 00:44:55] 2026-03-20 23:44:20,868 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-21 00:44:55] 2026-03-20 23:44:20,868 | INFO     | aborting loop
[2026-03-21 00:44:55] 2026-03-20 23:44:21,139 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-21 00:44:55] 2026-03-20 23:44:21,161 | INFO     | all data control threads have been joined
[2026-03-21 00:44:55] 2026-03-20 23:44:21,225 | INFO     | all payload control threads have been joined
[2026-03-21 00:44:55] 2026-03-20 23:44:21,734 | INFO     | [job] retrieve thread has finished
[2026-03-21 00:44:55] 2026-03-20 23:44:21,874 | INFO     | [job] job monitor thread has finished
[2026-03-21 00:44:55] 2026-03-20 23:44:21,895 | INFO     | [data] copytool_in thread has finished
[2026-03-21 00:44:55] 2026-03-20 23:44:21,937 | INFO     | [payload] validate_post thread has finished
[2026-03-21 00:44:55] 2026-03-20 23:44:21,963 | INFO     | [job] create_data_payload thread has finished
[2026-03-21 00:44:55] 2026-03-20 23:44:22,057 | INFO     | [payload] failed_post thread has finished
[2026-03-21 00:44:55] 2026-03-20 23:44:22,072 | INFO     | all job control threads have been joined
[2026-03-21 00:44:55] 2026-03-20 23:44:22,167 | INFO     | [data] control thread has finished
[2026-03-21 00:44:55] 2026-03-20 23:44:22,231 | INFO     | [payload] control thread has finished
[2026-03-21 00:44:55] 2026-03-20 23:44:22,372 | INFO     | [job] validate thread has finished
[2026-03-21 00:44:55] 2026-03-20 23:44:22,383 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-21 00:44:55] 2026-03-20 23:44:22,437 | INFO     | [payload] execute_payloads thread has finished
[2026-03-21 00:44:55] 2026-03-20 23:44:22,717 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-21 00:44:55] 2026-03-20 23:44:22,737 | INFO     | [data] copytool_out thread has finished
[2026-03-21 00:44:55] 2026-03-20 23:44:22,813 | INFO     | [payload] validate_pre thread has finished
[2026-03-21 00:44:55] 2026-03-20 23:44:23,078 | INFO     | [job] control thread has finished
[2026-03-21 00:44:55] 2026-03-20 23:44:23,389 | INFO     | [job] queue monitor thread has finished
[2026-03-21 00:44:55] 2026-03-20 23:44:25,148 | INFO     | [data] queue_monitor thread has finished
[2026-03-21 00:44:55] 2026-03-20 23:44:46,484 | INFO     | [monitor] cgroup control has ended
[2026-03-21 00:44:55] 2026-03-20 23:44:47,642 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140311091238720)>', '<ExcThread(monitor, started 140310625621760)>']
[2026-03-21 00:44:55] 2026-03-20 23:44:49,661 | INFO     | PID=32011 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-21 00:44:55] 2026-03-20 23:44:49,662 | INFO     | .. there are 9 such processes running
[2026-03-21 00:44:55] 2026-03-20 23:44:49,662 | INFO     | found 0 job(s) in 20 queues
[2026-03-21 00:44:55] 2026-03-20 23:44:49,662 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-21 00:44:55] 2026-03-20 23:44:49,662 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-21 00:44:55] 2026-03-20 23:44:49,662 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-21 00:44:55] 2026-03-20 23:44:49,662 | INFO     | [monitor] control thread has ended
[2026-03-21 00:44:55] 2026-03-20 23:44:52,668 | INFO     | all workflow threads have been joined
[2026-03-21 00:44:55] 2026-03-20 23:44:52,668 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-21 00:44:55] 2026-03-20 23:44:52,669 | INFO     | traces error code: 0
[2026-03-21 00:44:55] 2026-03-20 23:44:52,669 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-21 00:44:55] 2026-03-20 23:44:52,929 [wrapper] ==== pilot stdout END ====
[2026-03-21 00:44:55] 2026-03-20 23:44:52,974 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-21 00:44:55] 2026-03-20 23:44:52,995 [wrapper] pilotpid: 32011
[2026-03-21 00:44:55] 2026-03-20 23:44:53,033 [wrapper] Pilot exit status: 0
[2026-03-21 00:44:55] 2026-03-20 23:44:53,224 [wrapper] pandaids: 7055958620
[2026-03-21 00:44:55] 2026-03-20 23:44:54,028 [wrapper] cleanup supervisor_pilot 12401 32012
[2026-03-21 00:44:55] 2026-03-20 23:44:54,126 [wrapper] Test setup, not cleaning
[2026-03-21 00:44:55] 2026-03-20 23:44:54,195 [wrapper] apfmon messages muted
[2026-03-21 00:44:55] 2026-03-20 23:44:54,256 [wrapper] ==== wrapper stdout END ====
[2026-03-21 00:44:55] 2026-03-20 23:44:54,331 [wrapper] ==== wrapper stderr END ====
[2026-03-21 00:44:55]  *** Error codes and diagnostics ***
[2026-03-21 00:44:55]     "exeErrorCode": 0,
[2026-03-21 00:44:55]     "exeErrorDiag": "",
[2026-03-21 00:44:55]     "pilotErrorCode": 0,
[2026-03-21 00:44:55]     "pilotErrorDiag": "",
[2026-03-21 00:44:55]  *** Listing of results directory ***
[2026-03-21 00:44:55] total 2128712
[2026-03-21 00:44:55] -rw-r--r--. 1 boinc boinc     585013 Mar 15 15:32 pilot3.tar.gz
[2026-03-21 00:44:55] -rw-r--r--. 1 boinc boinc       5111 Mar 15 15:41 queuedata.json
[2026-03-21 00:44:55] -rwx------. 1 boinc boinc      36322 Mar 15 15:41 runpilot2-wrapper.sh
[2026-03-21 00:44:55] -rw-r--r--. 1 boinc boinc        100 Mar 18 11:03 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-21 00:44:55] -rwxr-xr-x. 1 boinc boinc       7986 Mar 18 11:03 run_atlas
[2026-03-21 00:44:55] -rw-r--r--. 1 boinc boinc        105 Mar 18 11:03 job.xml
[2026-03-21 00:44:55] -rw-r--r--. 1 boinc boinc       6392 Mar 18 11:03 init_data.xml
[2026-03-21 00:44:55] -rw-r--r--. 2 boinc boinc  335600300 Mar 18 11:03 EVNT.49149336._000001.pool.root.1
[2026-03-21 00:44:55] -rw-r--r--. 2 boinc boinc      15845 Mar 18 11:03 start_atlas.sh
[2026-03-21 00:44:55] drwxrwx--x. 2 boinc boinc         68 Mar 18 11:03 shared
[2026-03-21 00:44:55] -rw-r--r--. 2 boinc boinc     597710 Mar 18 11:03 input.tar.gz
[2026-03-21 00:44:55] -rw-r--r--. 1 boinc boinc          0 Mar 18 11:03 boinc_lockfile
[2026-03-21 00:44:55] -rw-r--r--. 1 boinc boinc       2950 Mar 18 11:03 pandaJob.out
[2026-03-21 00:44:55] -rw-------. 1 boinc boinc        415 Mar 18 11:09 workernode_map.json
[2026-03-21 00:44:55] -rw-------. 1 boinc boinc    1011565 Mar 18 11:09 agis_schedconf.cvmfs.json
[2026-03-21 00:44:55] drwx------. 5 boinc boinc       4096 Mar 18 11:09 pilot3
[2026-03-21 00:44:55] -rw-r--r--. 1 boinc boinc        533 Mar 21 00:15 boinc_task_state.xml
[2026-03-21 00:44:55] -rw-------. 1 boinc boinc 1769856700 Mar 21 00:42 HITS.49149347._000002.pool.root.1
[2026-03-21 00:44:55] -rw-------. 1 boinc boinc       1034 Mar 21 00:44 memory_monitor_summary.json
[2026-03-21 00:44:55] -rw-------. 1 boinc boinc         95 Mar 21 00:44 pilot_heartbeat.json
[2026-03-21 00:44:55] -rw-------. 1 boinc boinc    1511579 Mar 21 00:44 agis_ddmendpoints.agis.ALL.json
[2026-03-21 00:44:55] -rw-------. 1 boinc boinc    4486730 Mar 21 00:44 log.49149347._000002.job.log.tgz.1
[2026-03-21 00:44:55] -rw-------. 1 boinc boinc       6637 Mar 21 00:44 heartbeat.json
[2026-03-21 00:44:55] -rw-r--r--. 1 boinc boinc       8192 Mar 21 00:44 boinc_mmap_file
[2026-03-21 00:44:55] -rw-r--r--. 1 boinc boinc         30 Mar 21 00:44 wrapper_checkpoint.txt
[2026-03-21 00:44:55] -rw-------. 1 boinc boinc       4881 Mar 21 00:44 pilotlog.txt
[2026-03-21 00:44:55] -rw-------. 1 boinc boinc   30721838 Mar 21 00:44 log.49149347._000002.job.log.1
[2026-03-21 00:44:55] -rw-------. 1 boinc boinc        353 Mar 21 00:44 output.list
[2026-03-21 00:44:55] -rw-r--r--. 1 boinc boinc        620 Mar 21 00:44 runtime_log
[2026-03-21 00:44:55] -rw-------. 1 boinc boinc   35225600 Mar 21 00:44 result.tar.gz
[2026-03-21 00:44:55] -rw-r--r--. 1 boinc boinc       8833 Mar 21 00:44 runtime_log.err
[2026-03-21 00:44:55] -rw-------. 1 boinc boinc        666 Mar 21 00:44 kd8LDmfp1L9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmcEvLDm4kQ9Ho.diag
[2026-03-21 00:44:55] -rw-r--r--. 1 boinc boinc      21427 Mar 21 00:44 stderr.txt
[2026-03-21 00:44:56] HITS file was successfully produced:
[2026-03-21 00:44:56] -rw-------. 1 boinc boinc 1769856700 Mar 21 00:42 shared/HITS.pool.root.1
[2026-03-21 00:44:56]  *** Contents of shared directory: ***
[2026-03-21 00:44:56] total 2091112
[2026-03-21 00:44:56] -rw-r--r--. 2 boinc boinc  335600300 Mar 18 11:03 ATLAS.root_0
[2026-03-21 00:44:56] -rw-r--r--. 2 boinc boinc      15845 Mar 18 11:03 start_atlas.sh
[2026-03-21 00:44:56] -rw-r--r--. 2 boinc boinc     597710 Mar 18 11:03 input.tar.gz
[2026-03-21 00:44:56] -rw-------. 1 boinc boinc 1769856700 Mar 21 00:42 HITS.pool.root.1
[2026-03-21 00:44:56] -rw-------. 1 boinc boinc   35225600 Mar 21 00:44 result.tar.gz
00:44:57 (27945): run_atlas exited; CPU time 845237.338568
00:44:57 (27945): called boinc_finish(0)

</stderr_txt>
]]>

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