Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:08:38 (11990): wrapper (7.7.26015): starting
16:08:38 (11990): wrapper: running run_atlas (--nthreads 8)
[2026-03-15 16:08:38] Arguments: --nthreads 8
[2026-03-15 16:08:38] Threads: 8
[2026-03-15 16:08:38] Checking for CVMFS
[2026-03-15 16:08:39] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-15 16:08:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-15 16:08:42] Running cvmfs_config stat atlas.cern.ch
[2026-03-15 16:08:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-15 16:08:43] 2.11.2.0 31129 121483 136084 157318 3 53 24998728 25165824 4504 130560 148 27827117 99.771 23218627 837 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-03-15 16:08:43] CVMFS is ok
[2026-03-15 16:08:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-15 16:08:43] Checking for apptainer binary...
[2026-03-15 16:08:43] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-15 16:08:43] Running /usr/bin/apptainer --version
[2026-03-15 16:08:43] apptainer version 1.3.2-1.el7
[2026-03-15 16:08:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-15 16:08:47] cg-vwn364.simple-grid.lan
[2026-03-15 16:08:47] apptainer works
[2026-03-15 16:08:47] Set ATHENA_PROC_NUMBER=8
[2026-03-15 16:08:47] Set ATHENA_CORE_NUMBER=8
[2026-03-15 16:08:47] Starting ATLAS job with PandaID=7055947462
[2026-03-15 16:08:47] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-16 00:34:50]  *** The last 200 lines of the pilot log: ***
[2026-03-16 00:34:50] 2026-03-15 23:33:57,083 | INFO     | log transfer has been attempted: DONE
[2026-03-16 00:34:50] 2026-03-15 23:33:57,083 | INFO     | job 7055947462 has finished - writing final server update
[2026-03-16 00:34:50] 2026-03-15 23:33:57,083 | INFO     | total number of processed events: 400 (read)
[2026-03-16 00:34:50] 2026-03-15 23:33:57,086 | INFO     | using path: /var/lib/boinc/slots/11/PanDA_Pilot-7055947462/memory_monitor_summary.json (trf name=prmon)
[2026-03-16 00:34:50] 2026-03-15 23:33:57,086 | INFO     | extracted standard info from prmon json
[2026-03-16 00:34:50] 2026-03-15 23:33:57,086 | INFO     | extracted standard memory fields from prmon json
[2026-03-16 00:34:50] 2026-03-15 23:33:57,087 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-16 00:34:50] 2026-03-15 23:33:57,087 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-16 00:34:50] 2026-03-15 23:33:57,087 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-16 00:34:50] 2026-03-15 23:33:57,102 | INFO     | fitting pss+swap vs Time
[2026-03-16 00:34:50] 2026-03-15 23:33:57,103 | INFO     | sum of square deviations: 36035957522.0
[2026-03-16 00:34:50] 2026-03-15 23:33:57,110 | INFO     | sum of deviations: 40463785262.0
[2026-03-16 00:34:50] 2026-03-15 23:33:57,110 | INFO     | mean x: 1773602747.5
[2026-03-16 00:34:50] 2026-03-15 23:33:57,111 | INFO     | mean y: 2506280.2786885244
[2026-03-16 00:34:50] 2026-03-15 23:33:57,111 | INFO     | intersect: -1989023448.6349823
[2026-03-16 00:34:50] 2026-03-15 23:33:57,111 | INFO     | chi2: 5.7113483329792345
[2026-03-16 00:34:50] 2026-03-15 23:33:57,112 | INFO     | sum of square deviations: 34939602082.0
[2026-03-16 00:34:50] 2026-03-15 23:33:57,125 | INFO     | sum of deviations: 72000170992.00012
[2026-03-16 00:34:50] 2026-03-15 23:33:57,126 | INFO     | mean x: 1773602595.0
[2026-03-16 00:34:50] 2026-03-15 23:33:57,126 | INFO     | mean y: 2510629.3105590064
[2026-03-16 00:34:50] 2026-03-15 23:33:57,126 | INFO     | intersect: -3652358988.613418
[2026-03-16 00:34:50] 2026-03-15 23:33:57,127 | INFO     | chi2: 4.964683133813299
[2026-03-16 00:34:50] 2026-03-15 23:33:57,127 | INFO     | current chi2=4.964683133813299 (change=13.073361238614023 %)
[2026-03-16 00:34:50] 2026-03-15 23:33:57,127 | INFO     | right removable region: 482
[2026-03-16 00:34:50] 2026-03-15 23:33:57,128 | INFO     | sum of square deviations: 34939602082.0
[2026-03-16 00:34:50] 2026-03-15 23:33:57,135 | INFO     | sum of deviations: -123687655951.00005
[2026-03-16 00:34:50] 2026-03-15 23:33:57,135 | INFO     | mean x: 1773602900.0
[2026-03-16 00:34:50] 2026-03-15 23:33:57,135 | INFO     | mean y: 2529097.447204969
[2026-03-16 00:34:50] 2026-03-15 23:33:57,135 | INFO     | intersect: 6281157708.444216
[2026-03-16 00:34:50] 2026-03-15 23:33:57,136 | INFO     | chi2: 1.5927942881155137
[2026-03-16 00:34:50] 2026-03-15 23:33:57,136 | INFO     | current chi2=1.5927942881155137 (change=72.11176424106044 %)
[2026-03-16 00:34:50] 2026-03-15 23:33:57,137 | INFO     | sum of square deviations: 33865712179.5
[2026-03-16 00:34:50] 2026-03-15 23:33:57,144 | INFO     | sum of deviations: -164067396297.49997
[2026-03-16 00:34:50] 2026-03-15 23:33:57,145 | INFO     | mean x: 1773603052.5
[2026-03-16 00:34:50] 2026-03-15 23:33:57,145 | INFO     | mean y: 2534805.391213389
[2026-03-16 00:34:50] 2026-03-15 23:33:57,149 | INFO     | intersect: 8595014223.707386
[2026-03-16 00:34:50] 2026-03-15 23:33:57,150 | INFO     | chi2: 1.1417446123234805
[2026-03-16 00:34:50] 2026-03-15 23:33:57,150 | INFO     | current chi2=1.1417446123234805 (change=28.318137449229848 %)
[2026-03-16 00:34:50] 2026-03-15 23:33:57,151 | INFO     | sum of square deviations: 32814055252.0
[2026-03-16 00:34:50] 2026-03-15 23:33:57,158 | INFO     | sum of deviations: -164162096693.00003
[2026-03-16 00:34:50] 2026-03-15 23:33:57,158 | INFO     | mean x: 1773603205.0
[2026-03-16 00:34:50] 2026-03-15 23:33:57,158 | INFO     | mean y: 2534811.6384778013
[2026-03-16 00:34:50] 2026-03-15 23:33:57,159 | INFO     | intersect: 8875513740.887974
[2026-03-16 00:34:50] 2026-03-15 23:33:57,159 | INFO     | chi2: 1.1246485079701047
[2026-03-16 00:34:50] 2026-03-15 23:33:57,159 | INFO     | current chi2=1.1246485079701047 (change=1.4973667638846742 %)
[2026-03-16 00:34:50] 2026-03-15 23:33:57,160 | INFO     | left removable region: 30
[2026-03-16 00:34:50] 2026-03-15 23:33:57,160 | INFO     | sum of square deviations: 28634631773.0
[2026-03-16 00:34:50] 2026-03-15 23:33:57,167 | INFO     | sum of deviations: -88477122551.99998
[2026-03-16 00:34:50] 2026-03-15 23:33:57,167 | INFO     | mean x: 1773603479.5
[2026-03-16 00:34:50] 2026-03-15 23:33:57,167 | INFO     | mean y: 2532951.9955752213
[2026-03-16 00:34:50] 2026-03-15 23:33:57,168 | INFO     | intersect: 5482726783.659942
[2026-03-16 00:34:50] 2026-03-15 23:33:57,173 | INFO     | chi2: 0.29551352502362893
[2026-03-16 00:34:50] 2026-03-15 23:33:57,174 | INFO     | current memory leak: -3.09 B/s (using 452 data points, chi2=0.30)
[2026-03-16 00:34:50] 2026-03-15 23:33:57,175 | INFO     | could have reported an average CPU frequency of 1999 MHz (20 samples)
[2026-03-16 00:34:50] 2026-03-15 23:33:57,175 | INFO     | ..............................
[2026-03-16 00:34:50] 2026-03-15 23:33:57,175 | INFO     | . Timing measurements:
[2026-03-16 00:34:50] 2026-03-15 23:33:57,175 | INFO     | . get job = 0 s
[2026-03-16 00:34:50] 2026-03-15 23:33:57,175 | INFO     | . initial setup = 106 s
[2026-03-16 00:34:50] 2026-03-15 23:33:57,175 | INFO     | . payload setup = 146 s
[2026-03-16 00:34:50] 2026-03-15 23:33:57,175 | INFO     | . stage-in = 0 s
[2026-03-16 00:34:50] 2026-03-15 23:33:57,175 | INFO     | . payload execution = 29838 s
[2026-03-16 00:34:50] 2026-03-15 23:33:57,176 | INFO     | . stage-out = 4 s
[2026-03-16 00:34:50] 2026-03-15 23:33:57,176 | INFO     | . log creation = 1 s
[2026-03-16 00:34:50] 2026-03-15 23:33:57,176 | INFO     | ..............................
[2026-03-16 00:34:50] 2026-03-15 23:33:57,302 | INFO     | 
[2026-03-16 00:34:50] 2026-03-15 23:33:57,302 | INFO     | job summary report
[2026-03-16 00:34:50] 2026-03-15 23:33:57,302 | INFO     | --------------------------------------------------
[2026-03-16 00:34:50] 2026-03-15 23:33:57,302 | INFO     | PanDA job id: 7055947462
[2026-03-16 00:34:50] 2026-03-15 23:33:57,302 | INFO     | task id: 48967059
[2026-03-16 00:34:50] 2026-03-15 23:33:57,303 | INFO     | errors: (none)
[2026-03-16 00:34:50] 2026-03-15 23:33:57,303 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-16 00:34:50] 2026-03-15 23:33:57,303 | INFO     | pilot state: finished 
[2026-03-16 00:34:50] 2026-03-15 23:33:57,303 | INFO     | transexitcode: 0
[2026-03-16 00:34:50] 2026-03-15 23:33:57,303 | INFO     | exeerrorcode: 0
[2026-03-16 00:34:50] 2026-03-15 23:33:57,303 | INFO     | exeerrordiag: 
[2026-03-16 00:34:50] 2026-03-15 23:33:57,303 | INFO     | exitcode: 0
[2026-03-16 00:34:50] 2026-03-15 23:33:57,303 | INFO     | exitmsg: OK
[2026-03-16 00:34:50] 2026-03-15 23:33:57,303 | INFO     | cpuconsumptiontime: 115986 s
[2026-03-16 00:34:50] 2026-03-15 23:33:57,303 | INFO     | nevents: 400
[2026-03-16 00:34:50] 2026-03-15 23:33:57,303 | INFO     | neventsw: 0
[2026-03-16 00:34:50] 2026-03-15 23:33:57,304 | INFO     | pid: 20599
[2026-03-16 00:34:50] 2026-03-15 23:33:57,304 | INFO     | pgrp: 20599
[2026-03-16 00:34:50] 2026-03-15 23:33:57,304 | INFO     | corecount: 8
[2026-03-16 00:34:50] 2026-03-15 23:33:57,304 | INFO     | event service: False
[2026-03-16 00:34:50] 2026-03-15 23:33:57,304 | INFO     | sizes: {0: 2279125, 1: 2279811, 2: 2280272, 13: 2280272, 29988: 2318061, 29993: 2327061, 29996: 2327245, 29997: 2327439}
[2026-03-16 00:34:50] 2026-03-15 23:33:57,304 | INFO     | --------------------------------------------------
[2026-03-16 00:34:50] 2026-03-15 23:33:57,304 | INFO     | 
[2026-03-16 00:34:50] 2026-03-15 23:33:57,304 | INFO     | executing command: ls -lF /var/lib/boinc/slots/11
[2026-03-16 00:34:50] 2026-03-15 23:33:57,735 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-16 00:34:50] 2026-03-15 23:33:57,735 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-16 00:34:50] 2026-03-15 23:33:57,735 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-16 00:34:50] 2026-03-15 23:33:57,735 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-16 00:34:50] 2026-03-15 23:33:57,735 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-16 00:34:50] 2026-03-15 23:33:57,736 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-16 00:34:50] 2026-03-15 23:33:57,736 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-16 00:34:50] 2026-03-15 23:33:57,736 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-16 00:34:50] 2026-03-15 23:33:57,736 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-16 00:34:50] 2026-03-15 23:33:57,736 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-16 00:34:50] 2026-03-15 23:33:57,736 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-16 00:34:50] 2026-03-15 23:33:57,736 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-16 00:34:50] 2026-03-15 23:33:57,736 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-16 00:34:50] 2026-03-15 23:33:57,736 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-16 00:34:50] 2026-03-15 23:33:57,737 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-16 00:34:50] 2026-03-15 23:33:57,737 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-16 00:34:50] 2026-03-15 23:33:57,737 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-16 00:34:50] 2026-03-15 23:33:57,737 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-16 00:34:50] 2026-03-15 23:33:57,737 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-16 00:34:50] 2026-03-15 23:33:57,737 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-16 00:34:50] 2026-03-15 23:33:57,737 | INFO     | job 7055947462 has completed (purged errors)
[2026-03-16 00:34:50] 2026-03-15 23:33:57,738 | INFO     | overall cleanup function is called
[2026-03-16 00:34:50] 2026-03-15 23:33:58,746 | INFO     | --- collectZombieJob: --- 10, [20599]
[2026-03-16 00:34:50] 2026-03-15 23:33:58,746 | INFO     | zombie collector waiting for pid 20599
[2026-03-16 00:34:50] 2026-03-15 23:33:58,746 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-16 00:34:50] 2026-03-15 23:33:58,746 | INFO     | collected zombie processes
[2026-03-16 00:34:50] 2026-03-15 23:33:58,747 | INFO     | will attempt to kill all subprocesses of pid=20599
[2026-03-16 00:34:50] 2026-03-15 23:33:58,865 | INFO     | process IDs to be killed: [20599] (in reverse order)
[2026-03-16 00:34:50] 2026-03-15 23:33:59,031 | WARNING  | found no corresponding commands to process id(s)
[2026-03-16 00:34:50] 2026-03-15 23:33:59,031 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-16 00:34:50] 2026-03-15 23:33:59,034 | INFO     | did not find any defunct processes belonging to 20599
[2026-03-16 00:34:50] 2026-03-15 23:33:59,037 | INFO     | did not find any defunct processes belonging to 20599
[2026-03-16 00:34:50] 2026-03-15 23:33:59,037 | INFO     | ready for new job
[2026-03-16 00:34:50] 2026-03-15 23:33:59,037 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-16 00:34:50] 2026-03-15 23:33:59,040 | INFO     | **************************************
[2026-03-16 00:34:50] 2026-03-15 23:33:59,040 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-16 00:34:50] 2026-03-15 23:33:59,040 | INFO     | **************************************
[2026-03-16 00:34:50] 2026-03-15 23:33:59,040 | INFO     | 
[2026-03-16 00:34:50] 2026-03-15 23:33:59,041 | INFO     | pilot is running in a VM
[2026-03-16 00:34:50] 2026-03-15 23:33:59,041 | INFO     | architecture information:
[2026-03-16 00:34:50] 2026-03-15 23:33:59,041 | INFO     | executing command: cat /etc/os-release
[2026-03-16 00:34:50] 2026-03-15 23:33:59,268 | INFO     | cat /etc/os-release:
[2026-03-16 00:34:50] NAME="CentOS Linux"
[2026-03-16 00:34:50] VERSION="7 (Core)"
[2026-03-16 00:34:50] ID="centos"
[2026-03-16 00:34:50] ID_LIKE="rhel fedora"
[2026-03-16 00:34:50] VERSION_ID="7"
[2026-03-16 00:34:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-16 00:34:50] ANSI_COLOR="0;31"
[2026-03-16 00:34:50] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-16 00:34:50] HOME_URL="https://www.centos.org/"
[2026-03-16 00:34:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-16 00:34:50] 
[2026-03-16 00:34:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-16 00:34:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-16 00:34:50] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-16 00:34:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-16 00:34:50] 
[2026-03-16 00:34:50] 2026-03-15 23:33:59,269 | INFO     | **************************************
[2026-03-16 00:34:50] 2026-03-15 23:33:59,772 | INFO     | executing command: df -mP /var/lib/boinc/slots/11
[2026-03-16 00:34:50] 2026-03-15 23:34:00,005 | INFO     | sufficient remaining disk space (496540581888 B)
[2026-03-16 00:34:50] 2026-03-15 23:34:00,005 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-16 00:34:50] 2026-03-15 23:34:00,005 | INFO     | current server update state: UPDATING_FINAL
[2026-03-16 00:34:50] 2026-03-15 23:34:00,005 | INFO     | update_server=False
[2026-03-16 00:34:50] 2026-03-15 23:34:00,005 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-16 00:34:50] 2026-03-15 23:34:00,006 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-16 00:34:50] 2026-03-15 23:34:00,193 | INFO     | all payload control threads have been joined
[2026-03-16 00:34:50] 2026-03-15 23:34:00,554 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-16 00:34:50] 2026-03-15 23:34:00,554 | INFO     | aborting loop
[2026-03-16 00:34:50] 2026-03-15 23:34:00,987 | INFO     | all job control threads have been joined
[2026-03-16 00:34:50] 2026-03-15 23:34:01,011 | INFO     | [job] retrieve thread has finished
[2026-03-16 00:34:50] 2026-03-15 23:34:01,071 | INFO     | all data control threads have been joined
[2026-03-16 00:34:50] 2026-03-15 23:34:01,199 | INFO     | [payload] control thread has finished
[2026-03-16 00:34:50] 2026-03-15 23:34:01,312 | INFO     | [data] copytool_in thread has finished
[2026-03-16 00:34:50] 2026-03-15 23:34:01,539 | INFO     | [payload] validate_post thread has finished
[2026-03-16 00:34:50] 2026-03-15 23:34:01,560 | INFO     | [job] job monitor thread has finished
[2026-03-16 00:34:50] 2026-03-15 23:34:01,732 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-16 00:34:50] 2026-03-15 23:34:01,873 | INFO     | [payload] validate_pre thread has finished
[2026-03-16 00:34:50] 2026-03-15 23:34:01,993 | INFO     | [job] control thread has finished
[2026-03-16 00:34:50] 2026-03-15 23:34:02,013 | INFO     | [data] copytool_out thread has finished
[2026-03-16 00:34:50] 2026-03-15 23:34:02,027 | INFO     | [job] validate thread has finished
[2026-03-16 00:34:50] 2026-03-15 23:34:02,077 | INFO     | [data] control thread has finished
[2026-03-16 00:34:50] 2026-03-15 23:34:02,084 | INFO     | [payload] failed_post thread has finished
[2026-03-16 00:34:50] 2026-03-15 23:34:02,203 | INFO     | [payload] execute_payloads thread has finished
[2026-03-16 00:34:50] 2026-03-15 23:34:02,316 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-16 00:34:50] 2026-03-15 23:34:02,457 | INFO     | [job] create_data_payload thread has finished
[2026-03-16 00:34:50] 2026-03-15 23:34:02,994 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-16 00:34:50] 2026-03-15 23:34:03,322 | INFO     | [job] queue monitor thread has finished
[2026-03-16 00:34:50] 2026-03-15 23:34:07,003 | INFO     | [data] queue_monitor thread has finished
[2026-03-16 00:34:50] 2026-03-15 23:34:29,827 | INFO     | PID=16068 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-16 00:34:50] 2026-03-15 23:34:29,827 | INFO     | .. there are 9 such processes running
[2026-03-16 00:34:50] 2026-03-15 23:34:29,828 | INFO     | found 0 job(s) in 20 queues
[2026-03-16 00:34:50] 2026-03-15 23:34:29,828 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-16 00:34:50] 2026-03-15 23:34:29,828 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-16 00:34:50] 2026-03-15 23:34:39,206 | INFO     | [monitor] cgroup control has ended
[2026-03-16 00:34:50] 2026-03-15 23:34:40,210 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139919917025088)>', '<ExcThread(monitor, started 139919448053504)>']
[2026-03-16 00:34:50] 2026-03-15 23:34:40,893 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-16 00:34:50] 2026-03-15 23:34:40,893 | INFO     | [monitor] control thread has ended
[2026-03-16 00:34:50] 2026-03-15 23:34:45,235 | INFO     | all workflow threads have been joined
[2026-03-16 00:34:50] 2026-03-15 23:34:45,235 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-16 00:34:50] 2026-03-15 23:34:45,235 | INFO     | traces error code: 0
[2026-03-16 00:34:50] 2026-03-15 23:34:45,236 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-16 00:34:50] 2026-03-15 23:34:45,705 [wrapper] ==== pilot stdout END ====
[2026-03-16 00:34:50] 2026-03-15 23:34:45,760 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-16 00:34:50] 2026-03-15 23:34:45,803 [wrapper] pilotpid: 16068
[2026-03-16 00:34:50] 2026-03-15 23:34:45,920 [wrapper] Pilot exit status: 0
[2026-03-16 00:34:50] 2026-03-15 23:34:46,361 [wrapper] pandaids: 7055947462
[2026-03-16 00:34:50] 2026-03-15 23:34:47,331 [wrapper] cleanup supervisor_pilot 21137 16069
[2026-03-16 00:34:50] 2026-03-15 23:34:47,427 [wrapper] Test setup, not cleaning
[2026-03-16 00:34:50] 2026-03-15 23:34:47,451 [wrapper] apfmon messages muted
[2026-03-16 00:34:50] 2026-03-15 23:34:47,579 [wrapper] ==== wrapper stdout END ====
[2026-03-16 00:34:50] 2026-03-15 23:34:47,679 [wrapper] ==== wrapper stderr END ====
[2026-03-16 00:34:50]  *** Error codes and diagnostics ***
[2026-03-16 00:34:50]     "exeErrorCode": 0,
[2026-03-16 00:34:50]     "exeErrorDiag": "",
[2026-03-16 00:34:50]     "pilotErrorCode": 0,
[2026-03-16 00:34:50]     "pilotErrorDiag": "",
[2026-03-16 00:34:50]  *** Listing of results directory ***
[2026-03-16 00:34:50] total 485404
[2026-03-16 00:34:50] -rw-r--r--. 1 boinc boinc    585013 Mar 15 14:58 pilot3.tar.gz
[2026-03-16 00:34:50] -rw-r--r--. 1 boinc boinc      5111 Mar 15 15:11 queuedata.json
[2026-03-16 00:34:50] -rwx------. 1 boinc boinc     36322 Mar 15 15:12 runpilot2-wrapper.sh
[2026-03-16 00:34:50] -rw-r--r--. 1 boinc boinc       100 Mar 15 16:08 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-16 00:34:50] -rwxr-xr-x. 1 boinc boinc      7986 Mar 15 16:08 run_atlas
[2026-03-16 00:34:50] -rw-r--r--. 1 boinc boinc       105 Mar 15 16:08 job.xml
[2026-03-16 00:34:50] -rw-r--r--. 1 boinc boinc      6392 Mar 15 16:08 init_data.xml
[2026-03-16 00:34:50] -rw-r--r--. 2 boinc boinc 225622433 Mar 15 16:08 EVNT.48967057._000102.pool.root.1
[2026-03-16 00:34:50] -rw-r--r--. 2 boinc boinc     15845 Mar 15 16:08 start_atlas.sh
[2026-03-16 00:34:50] drwxrwx--x. 2 boinc boinc        68 Mar 15 16:08 shared
[2026-03-16 00:34:50] -rw-r--r--. 2 boinc boinc    597529 Mar 15 16:08 input.tar.gz
[2026-03-16 00:34:50] -rw-r--r--. 1 boinc boinc         0 Mar 15 16:08 boinc_lockfile
[2026-03-16 00:34:50] -rw-r--r--. 1 boinc boinc      2548 Mar 15 16:08 pandaJob.out
[2026-03-16 00:34:50] -rw-------. 1 boinc boinc       415 Mar 15 16:13 workernode_map.json
[2026-03-16 00:34:50] -rw-------. 1 boinc boinc   1006481 Mar 15 16:13 agis_schedconf.cvmfs.json
[2026-03-16 00:34:50] drwx------. 5 boinc boinc      4096 Mar 15 16:13 pilot3
[2026-03-16 00:34:50] -rw-------. 1 boinc boinc 257857243 Mar 16 00:32 HITS.48967059._003429.pool.root.1
[2026-03-16 00:34:50] -rw-r--r--. 1 boinc boinc       531 Mar 16 00:32 boinc_task_state.xml
[2026-03-16 00:34:50] -rw-------. 1 boinc boinc      1014 Mar 16 00:33 memory_monitor_summary.json
[2026-03-16 00:34:50] -rw-------. 1 boinc boinc   1511579 Mar 16 00:33 agis_ddmendpoints.agis.ALL.json
[2026-03-16 00:34:50] -rw-------. 1 boinc boinc    683298 Mar 16 00:33 log.48967059._003429.job.log.tgz.1
[2026-03-16 00:34:50] -rw-------. 1 boinc boinc        95 Mar 16 00:33 pilot_heartbeat.json
[2026-03-16 00:34:50] -rw-------. 1 boinc boinc      6321 Mar 16 00:33 heartbeat.json
[2026-03-16 00:34:50] -rw-------. 1 boinc boinc      4881 Mar 16 00:34 pilotlog.txt
[2026-03-16 00:34:50] -rw-------. 1 boinc boinc   4145007 Mar 16 00:34 log.48967059._003429.job.log.1
[2026-03-16 00:34:50] -rw-r--r--. 1 boinc boinc        29 Mar 16 00:34 wrapper_checkpoint.txt
[2026-03-16 00:34:50] -rw-r--r--. 1 boinc boinc      8192 Mar 16 00:34 boinc_mmap_file
[2026-03-16 00:34:50] -rw-------. 1 boinc boinc       357 Mar 16 00:34 output.list
[2026-03-16 00:34:50] -rw-r--r--. 1 boinc boinc       620 Mar 16 00:34 runtime_log
[2026-03-16 00:34:50] -rw-------. 1 boinc boinc   4843520 Mar 16 00:34 result.tar.gz
[2026-03-16 00:34:50] -rw-r--r--. 1 boinc boinc      8832 Mar 16 00:34 runtime_log.err
[2026-03-16 00:34:50] -rw-------. 1 boinc boinc       658 Mar 16 00:34 2IAODmkN1L9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDm4CvLDmWetrjn.diag
[2026-03-16 00:34:50] -rw-r--r--. 1 boinc boinc     20669 Mar 16 00:34 stderr.txt
[2026-03-16 00:34:50] HITS file was successfully produced:
[2026-03-16 00:34:50] -rw-------. 1 boinc boinc 257857243 Mar 16 00:32 shared/HITS.pool.root.1
[2026-03-16 00:34:50]  *** Contents of shared directory: ***
[2026-03-16 00:34:50] total 477484
[2026-03-16 00:34:50] -rw-r--r--. 2 boinc boinc 225622433 Mar 15 16:08 ATLAS.root_0
[2026-03-16 00:34:50] -rw-r--r--. 2 boinc boinc     15845 Mar 15 16:08 start_atlas.sh
[2026-03-16 00:34:50] -rw-r--r--. 2 boinc boinc    597529 Mar 15 16:08 input.tar.gz
[2026-03-16 00:34:50] -rw-------. 1 boinc boinc 257857243 Mar 16 00:32 HITS.pool.root.1
[2026-03-16 00:34:50] -rw-------. 1 boinc boinc   4843520 Mar 16 00:34 result.tar.gz
00:34:51 (11990): run_atlas exited; CPU time 116437.448358
00:34:51 (11990): called boinc_finish(0)

</stderr_txt>
]]>

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