Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
09:50:08 (258294): wrapper (7.7.26015): starting
09:50:08 (258294): wrapper: running run_atlas (--nthreads 8)
[2026-03-15 09:50:08] Arguments: --nthreads 8
[2026-03-15 09:50:08] Threads: 8
[2026-03-15 09:50:08] Checking for CVMFS
[2026-03-15 09:50:09] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-15 09:50:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-15 09:50:10] Running cvmfs_config stat atlas.cern.ch
[2026-03-15 09:50:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-15 09:50:11] 2.13.3.0 870035 110591 208812 157315 0 167 37696259 39288832 6665 16776704 0 63125053 99.776 73880173 37565 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-15 09:50:11] CVMFS is ok
[2026-03-15 09:50:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-15 09:50:11] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-15 09:50:11] Further information can be found at the LHC@home message board.
[2026-03-15 09:50:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-15 09:50:11] Checking for apptainer binary...
[2026-03-15 09:50:11] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-15 09:50:11] Running /usr/bin/apptainer --version
[2026-03-15 09:50:11] apptainer version 1.4.5-2.el9
[2026-03-15 09:50:11] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-15 09:50:12] c-210-20.aglt2.org
[2026-03-15 09:50:12] apptainer works
[2026-03-15 09:50:12] Set ATHENA_PROC_NUMBER=8
[2026-03-15 09:50:12] Set ATHENA_CORE_NUMBER=8
[2026-03-15 09:50:12] Starting ATLAS job with PandaID=7055920276
[2026-03-15 09:50:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-16 12:06:53]  *** The last 200 lines of the pilot log: ***
[2026-03-16 12:06:53] 2026-03-16 16:05:36,791 | INFO     | time since job start (94417s) is within the limit (345600.0s)
[2026-03-16 12:06:53] 2026-03-16 16:05:36,791 | INFO     | 94458s have passed since pilot start - server update state is 'RUNNING'
[2026-03-16 12:06:53] 2026-03-16 16:05:37,023 | INFO     | monitor loop #6684: job 0:7055920276 is in state 'finished'
[2026-03-16 12:06:53] 2026-03-16 16:05:37,023 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-16 12:06:53] 2026-03-16 16:05:37,803 | INFO     | job 7055920276 has state=finished
[2026-03-16 12:06:53] 2026-03-16 16:05:37,807 | INFO     | preparing for final server update for job 7055920276 in state='finished'
[2026-03-16 12:06:53] 2026-03-16 16:05:38,822 | INFO     | time since job start (94419s) is within the limit (345600.0s)
[2026-03-16 12:06:53] 2026-03-16 16:05:39,060 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-03-16 12:06:53] 2026-03-16 16:05:39,061 | INFO     | reading metadata from: /tmp/boinchome/slots/1/PanDA_Pilot-7055920276/jobReport.json
[2026-03-16 12:06:53] 2026-03-16 16:05:39,112 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/1/workernode_map.json
[2026-03-16 12:06:53] 2026-03-16 16:05:39,113 | INFO     | this job has now completed (state=finished)
[2026-03-16 12:06:53] 2026-03-16 16:05:39,113 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-16 12:06:53] 2026-03-16 16:05:39,113 | INFO     | log transfer has been attempted: DONE
[2026-03-16 12:06:53] 2026-03-16 16:05:39,113 | INFO     | job 7055920276 has finished - writing final server update
[2026-03-16 12:06:53] 2026-03-16 16:05:39,114 | INFO     | total number of processed events: 2050 (read)
[2026-03-16 12:06:53] 2026-03-16 16:05:39,220 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-7055920276/memory_monitor_summary.json (trf name=prmon)
[2026-03-16 12:06:53] 2026-03-16 16:05:39,220 | INFO     | extracted standard info from prmon json
[2026-03-16 12:06:53] 2026-03-16 16:05:39,220 | INFO     | extracted standard memory fields from prmon json
[2026-03-16 12:06:53] 2026-03-16 16:05:39,221 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-16 12:06:53] 2026-03-16 16:05:39,480 | INFO     | fitting pss+swap vs Time
[2026-03-16 12:06:53] 2026-03-16 16:05:39,492 | INFO     | sum of square deviations: 1145814490867.5854
[2026-03-16 12:06:53] 2026-03-16 16:05:39,698 | INFO     | monitor loop #6685: job 0:7055920276 is in state 'finished'
[2026-03-16 12:06:53] 2026-03-16 16:05:39,698 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-16 12:06:53] 2026-03-16 16:05:39,910 | INFO     | sum of deviations: 5138956158906.839
[2026-03-16 12:06:53] 2026-03-16 16:05:39,911 | INFO     | mean x: 1773629928.610608
[2026-03-16 12:06:53] 2026-03-16 16:05:39,911 | INFO     | mean y: 2994662.3751617074
[2026-03-16 12:06:53] 2026-03-16 16:05:39,911 | INFO     | intersect: -7951701772.257641
[2026-03-16 12:06:53] 2026-03-16 16:05:39,913 | INFO     | chi2: 33.82318739789991
[2026-03-16 12:06:53] 2026-03-16 16:05:39,937 | INFO     | sum of square deviations: 1134733904453.8975
[2026-03-16 12:06:53] 2026-03-16 16:05:40,333 | INFO     | sum of deviations: 5803921738031.147
[2026-03-16 12:06:53] 2026-03-16 16:05:40,333 | INFO     | mean x: 1773629776.1142116
[2026-03-16 12:06:53] 2026-03-16 16:05:40,333 | INFO     | mean y: 3003813.987670344
[2026-03-16 12:06:53] 2026-03-16 16:05:40,333 | INFO     | intersect: -9068733949.73297
[2026-03-16 12:06:53] 2026-03-16 16:05:40,366 | INFO     | chi2: 28.804899707795986
[2026-03-16 12:06:53] 2026-03-16 16:05:40,366 | INFO     | current chi2=28.804899707795986 (change=14.836826674754814 %)
[2026-03-16 12:06:53] 2026-03-16 16:05:40,366 | INFO     | right removable region: 1540
[2026-03-16 12:06:53] 2026-03-16 16:05:40,368 | INFO     | sum of square deviations: 1134732857083.8982
[2026-03-16 12:06:53] 2026-03-16 16:05:41,087 | INFO     | sum of deviations: 4517397820000.261
[2026-03-16 12:06:53] 2026-03-16 16:05:41,087 | INFO     | mean x: 1773630081.1142116
[2026-03-16 12:06:53] 2026-03-16 16:05:41,088 | INFO     | mean y: 3003214.549643089
[2026-03-16 12:06:53] 2026-03-16 16:05:41,088 | INFO     | intersect: -7057859271.18327
[2026-03-16 12:06:53] 2026-03-16 16:05:41,131 | INFO     | chi2: 30.148077881991174
[2026-03-16 12:06:53] 2026-03-16 16:05:41,131 | INFO     | current chi2=30.148077881991174 (change=10.865651047827983 %)
[2026-03-16 12:06:53] 2026-03-16 16:05:41,132 | INFO     | left removable region: 10
[2026-03-16 12:06:53] 2026-03-16 16:05:41,134 | INFO     | sum of square deviations: 1110606490839.6448
[2026-03-16 12:06:53] 2026-03-16 16:05:41,251 | INFO     | time since job start (94422s) is within the limit (345600.0s)
[2026-03-16 12:06:53] 2026-03-16 16:05:41,978 | INFO     | sum of deviations: 4804828866600.854
[2026-03-16 12:06:53] 2026-03-16 16:05:41,978 | INFO     | mean x: 1773630050.6222222
[2026-03-16 12:06:53] 2026-03-16 16:05:41,979 | INFO     | mean y: 3021397.345751634
[2026-03-16 12:06:53] 2026-03-16 16:05:41,979 | INFO     | intersect: -7670253463.003354
[2026-03-16 12:06:53] 2026-03-16 16:05:42,024 | INFO     | chi2: 21.684184226669785
[2026-03-16 12:06:53] 2026-03-16 16:05:42,025 | INFO     | current memory leak: 4.33 B/s (using 1530 data points, chi2=21.68)
[2026-03-16 12:06:53] 2026-03-16 16:05:42,026 | INFO     | could have reported an average CPU frequency of 2599 MHz (56 samples)
[2026-03-16 12:06:53] 2026-03-16 16:05:42,026 | INFO     | ..............................
[2026-03-16 12:06:53] 2026-03-16 16:05:42,027 | INFO     | . Timing measurements:
[2026-03-16 12:06:53] 2026-03-16 16:05:42,027 | INFO     | . get job = 1 s
[2026-03-16 12:06:53] 2026-03-16 16:05:42,027 | INFO     | . initial setup = 39 s
[2026-03-16 12:06:53] 2026-03-16 16:05:42,027 | INFO     | . payload setup = 41 s
[2026-03-16 12:06:53] 2026-03-16 16:05:42,027 | INFO     | . stage-in = 0 s
[2026-03-16 12:06:53] 2026-03-16 16:05:42,027 | INFO     | . payload execution = 94318 s
[2026-03-16 12:06:53] 2026-03-16 16:05:42,027 | INFO     | . stage-out = 33 s
[2026-03-16 12:06:53] 2026-03-16 16:05:42,027 | INFO     | . log creation = 13 s
[2026-03-16 12:06:53] 2026-03-16 16:05:42,027 | INFO     | ..............................
[2026-03-16 12:06:53] 2026-03-16 16:05:43,269 | INFO     | 
[2026-03-16 12:06:53] 2026-03-16 16:05:43,307 | INFO     | job summary report
[2026-03-16 12:06:53] 2026-03-16 16:05:43,307 | INFO     | --------------------------------------------------
[2026-03-16 12:06:53] 2026-03-16 16:05:43,307 | INFO     | PanDA job id: 7055920276
[2026-03-16 12:06:53] 2026-03-16 16:05:43,307 | INFO     | task id: 49145011
[2026-03-16 12:06:53] 2026-03-16 16:05:43,307 | INFO     | errors: (none)
[2026-03-16 12:06:53] 2026-03-16 16:05:43,307 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-16 12:06:53] 2026-03-16 16:05:43,307 | INFO     | pilot state: finished 
[2026-03-16 12:06:53] 2026-03-16 16:05:43,307 | INFO     | transexitcode: 0
[2026-03-16 12:06:53] 2026-03-16 16:05:43,307 | INFO     | exeerrorcode: 0
[2026-03-16 12:06:53] 2026-03-16 16:05:43,308 | INFO     | exeerrordiag: 
[2026-03-16 12:06:53] 2026-03-16 16:05:43,308 | INFO     | exitcode: 0
[2026-03-16 12:06:53] 2026-03-16 16:05:43,308 | INFO     | exitmsg: OK
[2026-03-16 12:06:53] 2026-03-16 16:05:43,308 | INFO     | cpuconsumptiontime: 580607 s
[2026-03-16 12:06:53] 2026-03-16 16:05:43,308 | INFO     | nevents: 2050
[2026-03-16 12:06:53] 2026-03-16 16:05:43,308 | INFO     | neventsw: 0
[2026-03-16 12:06:53] 2026-03-16 16:05:43,308 | INFO     | pid: 269645
[2026-03-16 12:06:53] 2026-03-16 16:05:43,308 | INFO     | pgrp: 269645
[2026-03-16 12:06:53] 2026-03-16 16:05:43,308 | INFO     | corecount: 8
[2026-03-16 12:06:53] 2026-03-16 16:05:43,309 | INFO     | event service: False
[2026-03-16 12:06:53] 2026-03-16 16:05:43,309 | INFO     | sizes: {0: 2279837, 1: 2280438, 2: 2280522, 3: 2280951, 4: 2281039, 15: 2281039, 94365: 2352380, 94366: 2352379, 94400: 2361433, 94402: 2361489, 94409: 2361735}
[2026-03-16 12:06:53] 2026-03-16 16:05:43,309 | INFO     | --------------------------------------------------
[2026-03-16 12:06:53] 2026-03-16 16:05:43,309 | INFO     | 
[2026-03-16 12:06:53] 2026-03-16 16:05:43,309 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-03-16 12:06:53] 2026-03-16 16:05:43,360 | INFO     | time since job start (94424s) is within the limit (345600.0s)
[2026-03-16 12:06:53] 2026-03-16 16:05:43,408 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-16 12:06:53] 2026-03-16 16:05:43,408 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-16 12:06:53] 2026-03-16 16:05:43,408 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-16 12:06:53] 2026-03-16 16:05:43,408 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-16 12:06:53] 2026-03-16 16:05:43,409 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-16 12:06:53] 2026-03-16 16:05:43,417 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-16 12:06:53] 2026-03-16 16:05:43,417 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-16 12:06:53] 2026-03-16 16:05:43,417 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-16 12:06:53] 2026-03-16 16:05:43,417 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-16 12:06:53] 2026-03-16 16:05:43,417 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-16 12:06:53] 2026-03-16 16:05:43,417 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-16 12:06:53] 2026-03-16 16:05:43,417 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-16 12:06:53] 2026-03-16 16:05:43,418 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-16 12:06:53] 2026-03-16 16:05:43,418 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-16 12:06:53] 2026-03-16 16:05:43,418 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-16 12:06:53] 2026-03-16 16:05:43,418 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-16 12:06:53] 2026-03-16 16:05:43,418 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-16 12:06:53] 2026-03-16 16:05:43,418 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-16 12:06:53] 2026-03-16 16:05:43,418 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-16 12:06:53] 2026-03-16 16:05:43,418 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-16 12:06:53] 2026-03-16 16:05:43,419 | INFO     | job 7055920276 has completed (purged errors)
[2026-03-16 12:06:53] 2026-03-16 16:05:43,419 | INFO     | overall cleanup function is called
[2026-03-16 12:06:53] 2026-03-16 16:05:44,610 | INFO     | --- collectZombieJob: --- 10, [269645]
[2026-03-16 12:06:53] 2026-03-16 16:05:44,610 | INFO     | zombie collector waiting for pid 269645
[2026-03-16 12:06:53] 2026-03-16 16:05:44,610 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-16 12:06:53] 2026-03-16 16:05:44,610 | INFO     | collected zombie processes
[2026-03-16 12:06:53] 2026-03-16 16:05:44,610 | INFO     | will attempt to kill all subprocesses of pid=269645
[2026-03-16 12:06:53] 2026-03-16 16:05:45,609 | INFO     | process IDs to be killed: [269645] (in reverse order)
[2026-03-16 12:06:53] 2026-03-16 16:05:46,661 | WARNING  | found no corresponding commands to process id(s)
[2026-03-16 12:06:53] 2026-03-16 16:05:46,661 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-16 12:06:53] 2026-03-16 16:05:46,746 | INFO     | did not find any defunct processes belonging to 269645
[2026-03-16 12:06:53] 2026-03-16 16:05:46,850 | INFO     | did not find any defunct processes belonging to 269645
[2026-03-16 12:06:53] 2026-03-16 16:05:46,850 | INFO     | ready for new job
[2026-03-16 12:06:53] 2026-03-16 16:05:46,851 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-16 12:06:53] 2026-03-16 16:05:46,917 | INFO     | **************************************
[2026-03-16 12:06:53] 2026-03-16 16:05:46,917 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-16 12:06:53] 2026-03-16 16:05:46,917 | INFO     | **************************************
[2026-03-16 12:06:53] 2026-03-16 16:05:46,917 | INFO     | 
[2026-03-16 12:06:53] 2026-03-16 16:05:46,958 | INFO     | architecture information:
[2026-03-16 12:06:53] 2026-03-16 16:05:46,959 | INFO     | executing command: cat /etc/os-release
[2026-03-16 12:06:53] 2026-03-16 16:05:47,010 | INFO     | cat /etc/os-release:
[2026-03-16 12:06:53] NAME="CentOS Linux"
[2026-03-16 12:06:53] VERSION="7 (Core)"
[2026-03-16 12:06:53] ID="centos"
[2026-03-16 12:06:53] ID_LIKE="rhel fedora"
[2026-03-16 12:06:53] VERSION_ID="7"
[2026-03-16 12:06:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-16 12:06:53] ANSI_COLOR="0;31"
[2026-03-16 12:06:53] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-16 12:06:53] HOME_URL="https://www.centos.org/"
[2026-03-16 12:06:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-16 12:06:53] 
[2026-03-16 12:06:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-16 12:06:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-16 12:06:53] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-16 12:06:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-16 12:06:53] 
[2026-03-16 12:06:53] 2026-03-16 16:05:47,010 | INFO     | **************************************
[2026-03-16 12:06:53] 2026-03-16 16:05:47,514 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-03-16 12:06:53] 2026-03-16 16:05:47,558 | INFO     | sufficient remaining disk space (50643075072 B)
[2026-03-16 12:06:53] 2026-03-16 16:05:47,559 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-16 12:06:53] 2026-03-16 16:05:47,559 | INFO     | current server update state: UPDATING_FINAL
[2026-03-16 12:06:53] 2026-03-16 16:05:47,559 | INFO     | update_server=False
[2026-03-16 12:06:53] 2026-03-16 16:05:47,559 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-16 12:06:53] 2026-03-16 16:05:47,559 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-16 12:06:53] 2026-03-16 16:05:47,563 | INFO     | all job control threads have been joined
[2026-03-16 12:06:53] 2026-03-16 16:05:48,173 | INFO     | all data control threads have been joined
[2026-03-16 12:06:53] 2026-03-16 16:05:48,252 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-16 12:06:53] 2026-03-16 16:05:48,284 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-16 12:06:53] 2026-03-16 16:05:48,403 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-16 12:06:53] 2026-03-16 16:05:48,412 | INFO     | aborting loop
[2026-03-16 12:06:53] 2026-03-16 16:05:48,565 | INFO     | [job] retrieve thread has finished
[2026-03-16 12:06:53] 2026-03-16 16:05:48,569 | INFO     | [job] control thread has finished
[2026-03-16 12:06:53] 2026-03-16 16:05:48,666 | INFO     | all payload control threads have been joined
[2026-03-16 12:06:53] 2026-03-16 16:05:48,989 | INFO     | [payload] failed_post thread has finished
[2026-03-16 12:06:53] 2026-03-16 16:05:49,178 | INFO     | [data] control thread has finished
[2026-03-16 12:06:53] 2026-03-16 16:05:49,290 | INFO     | [job] queue monitor thread has finished
[2026-03-16 12:06:53] 2026-03-16 16:05:49,391 | INFO     | [payload] validate_post thread has finished
[2026-03-16 12:06:53] 2026-03-16 16:05:49,417 | INFO     | [job] create_data_payload thread has finished
[2026-03-16 12:06:53] 2026-03-16 16:05:49,418 | INFO     | [payload] validate_pre thread has finished
[2026-03-16 12:06:53] 2026-03-16 16:05:49,418 | INFO     | [job] job monitor thread has finished
[2026-03-16 12:06:53] 2026-03-16 16:05:49,468 | INFO     | [job] validate thread has finished
[2026-03-16 12:06:53] 2026-03-16 16:05:49,474 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-16 12:06:53] 2026-03-16 16:05:49,478 | INFO     | [data] copytool_in thread has finished
[2026-03-16 12:06:53] 2026-03-16 16:05:49,672 | INFO     | [payload] control thread has finished
[2026-03-16 12:06:53] 2026-03-16 16:05:50,066 | INFO     | [payload] execute_payloads thread has finished
[2026-03-16 12:06:53] 2026-03-16 16:05:50,259 | INFO     | [data] copytool_out thread has finished
[2026-03-16 12:06:53] 2026-03-16 16:05:51,593 | INFO     | [data] queue_monitor thread has finished
[2026-03-16 12:06:53] 2026-03-16 16:06:19,258 | INFO     | PID=264085 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-16 12:06:53] 2026-03-16 16:06:19,259 | INFO     | .. there are 8 such processes running
[2026-03-16 12:06:53] 2026-03-16 16:06:19,271 | INFO     | found 0 job(s) in 20 queues
[2026-03-16 12:06:53] 2026-03-16 16:06:19,271 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-16 12:06:53] 2026-03-16 16:06:19,271 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-16 12:06:53] 2026-03-16 16:06:23,190 [wrapper] supervise_pilot (15 min periods counter: 106)
[2026-03-16 12:06:53] 2026-03-16 16:06:26,547 | INFO     | [monitor] cgroup control has ended
[2026-03-16 12:06:53] 2026-03-16 16:06:26,698 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140004872726336)>', '<ExcThread(monitor, started 140004508555008)>']
[2026-03-16 12:06:53] 2026-03-16 16:06:27,356 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-16 12:06:53] 2026-03-16 16:06:27,356 | INFO     | [monitor] control thread has ended
[2026-03-16 12:06:53] 2026-03-16 16:06:31,747 | INFO     | all workflow threads have been joined
[2026-03-16 12:06:53] 2026-03-16 16:06:31,831 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-16 12:06:53] 2026-03-16 16:06:31,831 | INFO     | traces error code: 0
[2026-03-16 12:06:53] 2026-03-16 16:06:31,831 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-16 12:06:53] 2026-03-16 16:06:32,427 [wrapper] ==== pilot stdout END ====
[2026-03-16 12:06:53] 2026-03-16 16:06:32,450 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-16 12:06:53] 2026-03-16 16:06:32,470 [wrapper] pilotpid: 264085
[2026-03-16 12:06:53] 2026-03-16 16:06:32,485 [wrapper] Pilot exit status: 0
[2026-03-16 12:06:53] 2026-03-16 16:06:32,561 [wrapper] pandaids: 7055920276
[2026-03-16 12:06:53] 2026-03-16 16:06:34,058 [wrapper] cleanup supervisor_pilot 2268171 264086
[2026-03-16 12:06:53] 2026-03-16 16:06:34,105 [wrapper] Test setup, not cleaning
[2026-03-16 12:06:53] 2026-03-16 16:06:34,171 [wrapper] apfmon messages muted
[2026-03-16 12:06:53] 2026-03-16 16:06:34,209 [wrapper] ==== wrapper stdout END ====
[2026-03-16 12:06:53] 2026-03-16 16:06:34,257 [wrapper] ==== wrapper stderr END ====
[2026-03-16 12:06:53]  *** Error codes and diagnostics ***
[2026-03-16 12:06:53]     "exeErrorCode": 0,
[2026-03-16 12:06:53]     "exeErrorDiag": "",
[2026-03-16 12:06:53]     "pilotErrorCode": 0,
[2026-03-16 12:06:53]     "pilotErrorDiag": "",
[2026-03-16 12:06:53]  *** Listing of results directory ***
[2026-03-16 12:06:53] total 2131888
[2026-03-16 12:06:53] -rw-r--r--. 1 boincer umatlas     585013 Mar 15 09:29 pilot3.tar.gz
[2026-03-16 12:06:53] -rwx------. 1 boincer umatlas      36322 Mar 15 09:49 runpilot2-wrapper.sh
[2026-03-16 12:06:53] -rw-r--r--. 1 boincer umatlas       5111 Mar 15 09:49 queuedata.json
[2026-03-16 12:06:53] -rw-r--r--. 1 boincer umatlas        100 Mar 15 09:50 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-16 12:06:53] -rwxr-xr-x. 1 boincer umatlas       7986 Mar 15 09:50 run_atlas
[2026-03-16 12:06:53] -rw-r--r--. 1 boincer umatlas        105 Mar 15 09:50 job.xml
[2026-03-16 12:06:53] -rw-r--r--. 2 boincer umatlas  335120855 Mar 15 09:50 EVNT.49145006._000001.pool.root.1
[2026-03-16 12:06:53] -rw-r--r--. 2 boincer umatlas     597708 Mar 15 09:50 input.tar.gz
[2026-03-16 12:06:53] -rw-r--r--. 2 boincer umatlas      15845 Mar 15 09:50 start_atlas.sh
[2026-03-16 12:06:53] drwxrwx--x. 2 boincer umatlas       4096 Mar 15 09:50 shared
[2026-03-16 12:06:53] -rw-r--r--. 1 boincer umatlas          0 Mar 15 09:50 boinc_lockfile
[2026-03-16 12:06:53] -rw-r--r--. 1 boincer umatlas       2943 Mar 15 09:50 pandaJob.out
[2026-03-16 12:06:53] -rw-------. 1 boincer umatlas         57 Mar 15 09:50 setup.sh.local
[2026-03-16 12:06:53] -rw-------. 1 boincer umatlas    1006481 Mar 15 09:51 agis_schedconf.cvmfs.json
[2026-03-16 12:06:53] -rw-------. 1 boincer umatlas        433 Mar 15 09:51 workernode_map.json
[2026-03-16 12:06:53] drwx------. 5 boincer umatlas       4096 Mar 15 09:51 pilot3
[2026-03-16 12:06:53] -rw-r--r--. 1 boincer umatlas        532 Mar 16 11:07 boinc_task_state.xml
[2026-03-16 12:06:53] -rw-------. 1 boincer umatlas 1812375506 Mar 16 11:57 HITS.49145011._000004.pool.root.1
[2026-03-16 12:06:53] -rw-r--r--. 1 boincer umatlas       6661 Mar 16 12:03 init_data.xml
[2026-03-16 12:06:53] -rw-------. 1 boincer umatlas       1052 Mar 16 12:04 memory_monitor_summary.json
[2026-03-16 12:06:53] -rw-------. 1 boincer umatlas    1511579 Mar 16 12:05 agis_ddmendpoints.agis.ALL.json
[2026-03-16 12:06:53] -rw-------. 1 boincer umatlas    2871261 Mar 16 12:05 log.49145011._000004.job.log.tgz.1
[2026-03-16 12:06:53] -rw-------. 1 boincer umatlas         95 Mar 16 12:05 pilot_heartbeat.json
[2026-03-16 12:06:53] -rw-------. 1 boincer umatlas       7029 Mar 16 12:05 heartbeat.json
[2026-03-16 12:06:53] -rw-------. 1 boincer umatlas       4818 Mar 16 12:06 pilotlog.txt
[2026-03-16 12:06:53] -rw-------. 1 boincer umatlas   12937762 Mar 16 12:06 log.49145011._000004.job.log.1
[2026-03-16 12:06:53] -rw-------. 1 boincer umatlas        353 Mar 16 12:06 output.list
[2026-03-16 12:06:53] -rw-r--r--. 1 boincer umatlas        620 Mar 16 12:06 runtime_log
[2026-03-16 12:06:53] -rw-------. 1 boincer umatlas   15831040 Mar 16 12:06 result.tar.gz
[2026-03-16 12:06:53] -rw-r--r--. 1 boincer umatlas       9342 Mar 16 12:06 runtime_log.err
[2026-03-16 12:06:53] -rw-------. 1 boincer umatlas        661 Mar 16 12:06 DPiKDma10L9n9Rq4apOajLDm4fhM0noT9bVooX4SDmDFsLDmqh3zfm.diag
[2026-03-16 12:06:53] -rw-r--r--. 1 boincer umatlas       8192 Mar 16 12:06 boinc_mmap_file
[2026-03-16 12:06:53] -rw-r--r--. 1 boincer umatlas         29 Mar 16 12:06 wrapper_checkpoint.txt
[2026-03-16 12:06:53] -rw-r--r--. 1 boincer umatlas      21624 Mar 16 12:06 stderr.txt
[2026-03-16 12:06:53] HITS file was successfully produced:
[2026-03-16 12:06:53] -rw-------. 1 boincer umatlas 1812375506 Mar 16 11:57 shared/HITS.pool.root.1
[2026-03-16 12:06:54]  *** Contents of shared directory: ***
[2026-03-16 12:06:54] total 2113232
[2026-03-16 12:06:54] -rw-r--r--. 2 boincer umatlas  335120855 Mar 15 09:50 ATLAS.root_0
[2026-03-16 12:06:54] -rw-r--r--. 2 boincer umatlas     597708 Mar 15 09:50 input.tar.gz
[2026-03-16 12:06:54] -rw-r--r--. 2 boincer umatlas      15845 Mar 15 09:50 start_atlas.sh
[2026-03-16 12:06:54] -rw-------. 1 boincer umatlas 1812375506 Mar 16 11:57 HITS.pool.root.1
[2026-03-16 12:06:54] -rw-------. 1 boincer umatlas   15831040 Mar 16 12:06 result.tar.gz
12:06:55 (258294): run_atlas exited; CPU time 582092.964416
12:06:55 (258294): called boinc_finish(0)

</stderr_txt>
]]>

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