Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
09:39:49 (2553): wrapper (7.7.26015): starting
09:39:49 (2553): wrapper: running run_atlas (--nthreads 8)
[2026-03-15 09:39:49] Arguments: --nthreads 8
[2026-03-15 09:39:49] Threads: 8
[2026-03-15 09:39:49] Checking for CVMFS
[2026-03-15 09:39:50] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-15 09:39:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-15 09:39:50] Running cvmfs_config stat atlas.cern.ch
[2026-03-15 09:39:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-15 09:39:50] 2.11.2.0 2991 125141 96024 157315 3 1 12816465 20275201 1 130560 0 34640740 99.905 6662022 26415 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-15 09:39:50] CVMFS is ok
[2026-03-15 09:39:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-15 09:39:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-15 09:39:50] Further information can be found at the LHC@home message board.
[2026-03-15 09:39:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-15 09:39:50] Checking for apptainer binary...
[2026-03-15 09:39:50] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-15 09:39:50] Running /usr/bin/apptainer --version
[2026-03-15 09:39:50] apptainer version 1.3.2-1.el7
[2026-03-15 09:39:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-15 09:39:51] c-115-4.aglt2.org
[2026-03-15 09:39:51] apptainer works
[2026-03-15 09:39:51] Set ATHENA_PROC_NUMBER=8
[2026-03-15 09:39:51] Set ATHENA_CORE_NUMBER=8
[2026-03-15 09:39:51] Starting ATLAS job with PandaID=7055910544
[2026-03-15 09:39:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-15 11:24:32]  *** The last 200 lines of the pilot log: ***
[2026-03-15 11:24:32] 2026-03-15 15:23:47,010 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-15 11:24:32] 2026-03-15 15:23:47,010 | INFO     | log transfer has been attempted: DONE
[2026-03-15 11:24:32] 2026-03-15 15:23:47,011 | INFO     | job 7055910544 has finished - writing final server update
[2026-03-15 11:24:32] 2026-03-15 15:23:47,011 | INFO     | total number of processed events: 400 (read)
[2026-03-15 11:24:32] 2026-03-15 15:23:47,013 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7055910544/memory_monitor_summary.json (trf name=prmon)
[2026-03-15 11:24:32] 2026-03-15 15:23:47,014 | INFO     | extracted standard info from prmon json
[2026-03-15 11:24:32] 2026-03-15 15:23:47,014 | INFO     | extracted standard memory fields from prmon json
[2026-03-15 11:24:32] 2026-03-15 15:23:47,014 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-15 11:24:32] 2026-03-15 15:23:47,015 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-15 11:24:32] 2026-03-15 15:23:47,015 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-15 11:24:32] 2026-03-15 15:23:47,017 | INFO     | fitting pss+swap vs Time
[2026-03-15 11:24:32] 2026-03-15 15:23:47,017 | INFO     | sum of square deviations: 329031285.5
[2026-03-15 11:24:32] 2026-03-15 15:23:47,018 | INFO     | sum of deviations: -11363721354.0
[2026-03-15 11:24:32] 2026-03-15 15:23:47,018 | INFO     | mean x: 1773585121.5
[2026-03-15 11:24:32] 2026-03-15 15:23:47,018 | INFO     | mean y: 2562430.0196078434
[2026-03-15 11:24:32] 2026-03-15 15:23:47,018 | INFO     | intersect: 61256698454.49876
[2026-03-15 11:24:32] 2026-03-15 15:23:47,018 | INFO     | chi2: 2.3225969044339174
[2026-03-15 11:24:32] 2026-03-15 15:23:47,018 | INFO     | sum of square deviations: 282974608.0
[2026-03-15 11:24:32] 2026-03-15 15:23:47,019 | INFO     | sum of deviations: -3436711696.0000024
[2026-03-15 11:24:32] 2026-03-15 15:23:47,019 | INFO     | mean x: 1773584969.0
[2026-03-15 11:24:32] 2026-03-15 15:23:47,019 | INFO     | mean y: 2587799.9484536084
[2026-03-15 11:24:32] 2026-03-15 15:23:47,019 | INFO     | intersect: 21542683746.69185
[2026-03-15 11:24:32] 2026-03-15 15:23:47,019 | INFO     | chi2: 1.5633405969043725
[2026-03-15 11:24:32] 2026-03-15 15:23:47,020 | INFO     | current chi2=1.5633405969043725 (change=32.68997328292733 %)
[2026-03-15 11:24:32] 2026-03-15 15:23:47,020 | INFO     | sum of square deviations: 241429643.0
[2026-03-15 11:24:32] 2026-03-15 15:23:47,020 | INFO     | sum of deviations: -2346506825.0
[2026-03-15 11:24:32] 2026-03-15 15:23:47,020 | INFO     | mean x: 1773584816.5
[2026-03-15 11:24:32] 2026-03-15 15:23:47,020 | INFO     | mean y: 2591805.5
[2026-03-15 11:24:32] 2026-03-15 15:23:47,021 | INFO     | intersect: 17240445554.194904
[2026-03-15 11:24:32] 2026-03-15 15:23:47,021 | INFO     | chi2: 1.5665431299930148
[2026-03-15 11:24:32] 2026-03-15 15:23:47,021 | INFO     | current chi2=1.5665431299930148 (change=-0.20485191102845532 %)
[2026-03-15 11:24:32] 2026-03-15 15:23:47,021 | INFO     | right removable region: 91
[2026-03-15 11:24:32] 2026-03-15 15:23:47,021 | INFO     | sum of square deviations: 282974608.0
[2026-03-15 11:24:32] 2026-03-15 15:23:47,022 | INFO     | sum of deviations: -25790435708.0
[2026-03-15 11:24:32] 2026-03-15 15:23:47,022 | INFO     | mean x: 1773585274.0
[2026-03-15 11:24:32] 2026-03-15 15:23:47,022 | INFO     | mean y: 2608974.9587628865
[2026-03-15 11:24:32] 2026-03-15 15:23:47,022 | INFO     | intersect: 161647985233.42703
[2026-03-15 11:24:32] 2026-03-15 15:23:47,022 | INFO     | chi2: 0.8845015340750993
[2026-03-15 11:24:32] 2026-03-15 15:23:47,022 | INFO     | current chi2=0.8845015340750993 (change=61.91756165753276 %)
[2026-03-15 11:24:32] 2026-03-15 15:23:47,023 | INFO     | sum of square deviations: 241429643.0
[2026-03-15 11:24:32] 2026-03-15 15:23:47,023 | INFO     | sum of deviations: -23619914371.000004
[2026-03-15 11:24:32] 2026-03-15 15:23:47,023 | INFO     | mean x: 1773585426.5
[2026-03-15 11:24:32] 2026-03-15 15:23:47,023 | INFO     | mean y: 2600979.586956522
[2026-03-15 11:24:32] 2026-03-15 15:23:47,023 | INFO     | intersect: 173518725110.1417
[2026-03-15 11:24:32] 2026-03-15 15:23:47,024 | INFO     | chi2: 0.8827619976878688
[2026-03-15 11:24:32] 2026-03-15 15:23:47,024 | INFO     | current chi2=0.8827619976878688 (change=0.19666855513705306 %)
[2026-03-15 11:24:32] 2026-03-15 15:23:47,024 | INFO     | left removable region: 20
[2026-03-15 11:24:32] 2026-03-15 15:23:47,024 | INFO     | sum of square deviations: 110960220.0
[2026-03-15 11:24:32] 2026-03-15 15:23:47,024 | INFO     | sum of deviations: -10357224647.999998
[2026-03-15 11:24:32] 2026-03-15 15:23:47,024 | INFO     | mean x: 1773585396.0
[2026-03-15 11:24:32] 2026-03-15 15:23:47,024 | INFO     | mean y: 2619152.6619718308
[2026-03-15 11:24:32] 2026-03-15 15:23:47,025 | INFO     | intersect: 165552240258.172
[2026-03-15 11:24:32] 2026-03-15 15:23:47,025 | INFO     | chi2: 0.06476661393632277
[2026-03-15 11:24:32] 2026-03-15 15:23:47,025 | INFO     | current memory leak: -93.34 B/s (using 71 data points, chi2=0.06)
[2026-03-15 11:24:32] 2026-03-15 15:23:47,025 | INFO     | could have reported an average CPU frequency of 1679 MHz (7 samples)
[2026-03-15 11:24:32] 2026-03-15 15:23:47,025 | INFO     | ..............................
[2026-03-15 11:24:32] 2026-03-15 15:23:47,026 | INFO     | . Timing measurements:
[2026-03-15 11:24:32] 2026-03-15 15:23:47,026 | INFO     | . get job = 0 s
[2026-03-15 11:24:32] 2026-03-15 15:23:47,026 | INFO     | . initial setup = 8 s
[2026-03-15 11:24:32] 2026-03-15 15:23:47,026 | INFO     | . payload setup = 8 s
[2026-03-15 11:24:32] 2026-03-15 15:23:47,026 | INFO     | . stage-in = 0 s
[2026-03-15 11:24:32] 2026-03-15 15:23:47,026 | INFO     | . payload execution = 6181 s
[2026-03-15 11:24:32] 2026-03-15 15:23:47,026 | INFO     | . stage-out = 0 s
[2026-03-15 11:24:32] 2026-03-15 15:23:47,026 | INFO     | . log creation = 0 s
[2026-03-15 11:24:32] 2026-03-15 15:23:47,026 | INFO     | ..............................
[2026-03-15 11:24:32] 2026-03-15 15:23:47,104 | INFO     | 
[2026-03-15 11:24:32] 2026-03-15 15:23:47,105 | INFO     | job summary report
[2026-03-15 11:24:32] 2026-03-15 15:23:47,105 | INFO     | --------------------------------------------------
[2026-03-15 11:24:32] 2026-03-15 15:23:47,105 | INFO     | PanDA job id: 7055910544
[2026-03-15 11:24:32] 2026-03-15 15:23:47,105 | INFO     | task id: 48955010
[2026-03-15 11:24:32] 2026-03-15 15:23:47,105 | INFO     | errors: (none)
[2026-03-15 11:24:32] 2026-03-15 15:23:47,106 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-15 11:24:32] 2026-03-15 15:23:47,106 | INFO     | pilot state: finished 
[2026-03-15 11:24:32] 2026-03-15 15:23:47,106 | INFO     | transexitcode: 0
[2026-03-15 11:24:32] 2026-03-15 15:23:47,106 | INFO     | exeerrorcode: 0
[2026-03-15 11:24:32] 2026-03-15 15:23:47,106 | INFO     | exeerrordiag: 
[2026-03-15 11:24:32] 2026-03-15 15:23:47,107 | INFO     | exitcode: 0
[2026-03-15 11:24:32] 2026-03-15 15:23:47,107 | INFO     | exitmsg: OK
[2026-03-15 11:24:32] 2026-03-15 15:23:47,107 | INFO     | cpuconsumptiontime: 46110 s
[2026-03-15 11:24:32] 2026-03-15 15:23:47,107 | INFO     | nevents: 400
[2026-03-15 11:24:32] 2026-03-15 15:23:47,107 | INFO     | neventsw: 0
[2026-03-15 11:24:32] 2026-03-15 15:23:47,107 | INFO     | pid: 10839
[2026-03-15 11:24:32] 2026-03-15 15:23:47,108 | INFO     | pgrp: 10839
[2026-03-15 11:24:32] 2026-03-15 15:23:47,108 | INFO     | corecount: 8
[2026-03-15 11:24:32] 2026-03-15 15:23:47,108 | INFO     | event service: False
[2026-03-15 11:24:32] 2026-03-15 15:23:47,108 | INFO     | sizes: {0: 2280177, 11: 2280177, 6194: 2307135, 6195: 2316133, 6197: 2316189, 6200: 2316383}
[2026-03-15 11:24:32] 2026-03-15 15:23:47,108 | INFO     | --------------------------------------------------
[2026-03-15 11:24:32] 2026-03-15 15:23:47,108 | INFO     | 
[2026-03-15 11:24:32] 2026-03-15 15:23:47,109 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-03-15 11:24:32] 2026-03-15 15:23:47,141 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-15 11:24:32] 2026-03-15 15:23:47,142 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-15 11:24:32] 2026-03-15 15:23:47,142 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-15 11:24:32] 2026-03-15 15:23:47,142 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-15 11:24:32] 2026-03-15 15:23:47,142 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-15 11:24:32] 2026-03-15 15:23:47,142 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-15 11:24:32] 2026-03-15 15:23:47,142 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-15 11:24:32] 2026-03-15 15:23:47,143 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-15 11:24:32] 2026-03-15 15:23:47,143 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-15 11:24:32] 2026-03-15 15:23:47,143 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-15 11:24:32] 2026-03-15 15:23:47,143 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-15 11:24:32] 2026-03-15 15:23:47,143 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-15 11:24:32] 2026-03-15 15:23:47,143 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-15 11:24:32] 2026-03-15 15:23:47,144 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-15 11:24:32] 2026-03-15 15:23:47,144 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-15 11:24:32] 2026-03-15 15:23:47,144 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-15 11:24:32] 2026-03-15 15:23:47,144 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-15 11:24:32] 2026-03-15 15:23:47,144 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-15 11:24:32] 2026-03-15 15:23:47,144 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-15 11:24:32] 2026-03-15 15:23:47,145 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-15 11:24:32] 2026-03-15 15:23:47,145 | INFO     | job 7055910544 has completed (purged errors)
[2026-03-15 11:24:32] 2026-03-15 15:23:47,145 | INFO     | overall cleanup function is called
[2026-03-15 11:24:32] 2026-03-15 15:23:48,149 | INFO     | --- collectZombieJob: --- 10, [10839]
[2026-03-15 11:24:32] 2026-03-15 15:23:48,149 | INFO     | zombie collector waiting for pid 10839
[2026-03-15 11:24:32] 2026-03-15 15:23:48,155 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-15 11:24:32] 2026-03-15 15:23:48,155 | INFO     | collected zombie processes
[2026-03-15 11:24:32] 2026-03-15 15:23:48,155 | INFO     | will attempt to kill all subprocesses of pid=10839
[2026-03-15 11:24:32] 2026-03-15 15:23:48,239 | INFO     | process IDs to be killed: [10839] (in reverse order)
[2026-03-15 11:24:32] 2026-03-15 15:23:48,301 | WARNING  | found no corresponding commands to process id(s)
[2026-03-15 11:24:32] 2026-03-15 15:23:48,301 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-15 11:24:32] 2026-03-15 15:23:48,304 | INFO     | did not find any defunct processes belonging to 10839
[2026-03-15 11:24:32] 2026-03-15 15:23:48,306 | INFO     | did not find any defunct processes belonging to 10839
[2026-03-15 11:24:32] 2026-03-15 15:23:48,307 | INFO     | ready for new job
[2026-03-15 11:24:32] 2026-03-15 15:23:48,307 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-15 11:24:32] 2026-03-15 15:23:48,309 | INFO     | **************************************
[2026-03-15 11:24:32] 2026-03-15 15:23:48,309 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-15 11:24:32] 2026-03-15 15:23:48,309 | INFO     | **************************************
[2026-03-15 11:24:32] 2026-03-15 15:23:48,309 | INFO     | 
[2026-03-15 11:24:32] 2026-03-15 15:23:48,310 | INFO     | architecture information:
[2026-03-15 11:24:32] 2026-03-15 15:23:48,310 | INFO     | executing command: cat /etc/os-release
[2026-03-15 11:24:32] 2026-03-15 15:23:48,329 | INFO     | cat /etc/os-release:
[2026-03-15 11:24:32] NAME="CentOS Linux"
[2026-03-15 11:24:32] VERSION="7 (Core)"
[2026-03-15 11:24:32] ID="centos"
[2026-03-15 11:24:32] ID_LIKE="rhel fedora"
[2026-03-15 11:24:32] VERSION_ID="7"
[2026-03-15 11:24:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-15 11:24:32] ANSI_COLOR="0;31"
[2026-03-15 11:24:32] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-15 11:24:32] HOME_URL="https://www.centos.org/"
[2026-03-15 11:24:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-15 11:24:32] 
[2026-03-15 11:24:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-15 11:24:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-15 11:24:32] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-15 11:24:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-15 11:24:32] 
[2026-03-15 11:24:32] 2026-03-15 15:23:48,330 | INFO     | **************************************
[2026-03-15 11:24:32] 2026-03-15 15:23:48,830 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-03-15 11:24:32] 2026-03-15 15:23:48,851 | INFO     | sufficient remaining disk space (18123587584 B)
[2026-03-15 11:24:32] 2026-03-15 15:23:48,852 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-15 11:24:32] 2026-03-15 15:23:48,852 | INFO     | current server update state: UPDATING_FINAL
[2026-03-15 11:24:32] 2026-03-15 15:23:48,853 | INFO     | update_server=False
[2026-03-15 11:24:32] 2026-03-15 15:23:48,853 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-15 11:24:32] 2026-03-15 15:23:48,853 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-15 11:24:32] 2026-03-15 15:23:48,854 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-15 11:24:32] 2026-03-15 15:23:48,854 | INFO     | aborting loop
[2026-03-15 11:24:32] 2026-03-15 15:23:48,929 | INFO     | all job control threads have been joined
[2026-03-15 11:24:32] 2026-03-15 15:23:49,856 | INFO     | [job] retrieve thread has finished
[2026-03-15 11:24:32] 2026-03-15 15:23:49,858 | INFO     | [job] queue monitor thread has finished
[2026-03-15 11:24:32] 2026-03-15 15:23:49,860 | INFO     | [job] job monitor thread has finished
[2026-03-15 11:24:32] 2026-03-15 15:23:49,916 | INFO     | all data control threads have been joined
[2026-03-15 11:24:32] 2026-03-15 15:23:49,934 | INFO     | [job] control thread has finished
[2026-03-15 11:24:32] 2026-03-15 15:23:50,109 | INFO     | [payload] failed_post thread has finished
[2026-03-15 11:24:32] 2026-03-15 15:23:50,130 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-15 11:24:32] 2026-03-15 15:23:50,173 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-15 11:24:32] 2026-03-15 15:23:50,217 | INFO     | all payload control threads have been joined
[2026-03-15 11:24:32] 2026-03-15 15:23:50,239 | INFO     | [job] validate thread has finished
[2026-03-15 11:24:32] 2026-03-15 15:23:50,300 | INFO     | [job] create_data_payload thread has finished
[2026-03-15 11:24:32] 2026-03-15 15:23:50,626 | INFO     | [payload] execute_payloads thread has finished
[2026-03-15 11:24:32] 2026-03-15 15:23:50,834 | INFO     | [payload] validate_pre thread has finished
[2026-03-15 11:24:32] 2026-03-15 15:23:50,858 | INFO     | [data] copytool_in thread has finished
[2026-03-15 11:24:32] 2026-03-15 15:23:50,921 | INFO     | [data] control thread has finished
[2026-03-15 11:24:32] 2026-03-15 15:23:51,222 | INFO     | [payload] control thread has finished
[2026-03-15 11:24:32] 2026-03-15 15:23:51,290 | INFO     | [payload] validate_post thread has finished
[2026-03-15 11:24:32] 2026-03-15 15:23:52,136 | INFO     | [data] copytool_out thread has finished
[2026-03-15 11:24:32] 2026-03-15 15:23:54,179 | INFO     | [data] queue_monitor thread has finished
[2026-03-15 11:24:32] 2026-03-15 15:23:59,586 | INFO     | job.realtimelogging is not enabled
[2026-03-15 11:24:32] 2026-03-15 15:24:00,591 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-15 11:24:32] 2026-03-15 15:24:19,007 | INFO     | PID=6389 has CPU usage=3.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-03-15 11:24:32] 2026-03-15 15:24:19,008 | INFO     | found 0 job(s) in 20 queues
[2026-03-15 11:24:32] 2026-03-15 15:24:19,008 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-15 11:24:32] 2026-03-15 15:24:19,008 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-15 11:24:32] 2026-03-15 15:24:25,024 | INFO     | [monitor] cgroup control has ended
[2026-03-15 11:24:32] 2026-03-15 15:24:27,130 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139786558265152)>', '<ExcThread(monitor, started 139785683334912)>']
[2026-03-15 11:24:32] 2026-03-15 15:24:28,050 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-15 11:24:32] 2026-03-15 15:24:28,051 | INFO     | [monitor] control thread has ended
[2026-03-15 11:24:32] 2026-03-15 15:24:32,147 | INFO     | all workflow threads have been joined
[2026-03-15 11:24:32] 2026-03-15 15:24:32,147 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-15 11:24:32] 2026-03-15 15:24:32,148 | INFO     | traces error code: 0
[2026-03-15 11:24:32] 2026-03-15 15:24:32,149 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-15 11:24:32] 2026-03-15 15:24:32,270 [wrapper] ==== pilot stdout END ====
[2026-03-15 11:24:32] 2026-03-15 15:24:32,276 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-15 11:24:32] 2026-03-15 15:24:32,281 [wrapper] pilotpid: 6389
[2026-03-15 11:24:32] 2026-03-15 15:24:32,286 [wrapper] Pilot exit status: 0
[2026-03-15 11:24:32] 2026-03-15 15:24:32,306 [wrapper] pandaids: 7055910544
[2026-03-15 11:24:32] 2026-03-15 15:24:32,353 [wrapper] cleanup supervisor_pilot 12462 6390
[2026-03-15 11:24:32] 2026-03-15 15:24:32,359 [wrapper] Test setup, not cleaning
[2026-03-15 11:24:32] 2026-03-15 15:24:32,364 [wrapper] apfmon messages muted
[2026-03-15 11:24:32] 2026-03-15 15:24:32,368 [wrapper] ==== wrapper stdout END ====
[2026-03-15 11:24:32] 2026-03-15 15:24:32,373 [wrapper] ==== wrapper stderr END ====
[2026-03-15 11:24:32]  *** Error codes and diagnostics ***
[2026-03-15 11:24:32]     "exeErrorCode": 0,
[2026-03-15 11:24:32]     "exeErrorDiag": "",
[2026-03-15 11:24:32]     "pilotErrorCode": 0,
[2026-03-15 11:24:32]     "pilotErrorDiag": "",
[2026-03-15 11:24:32]  *** Listing of results directory ***
[2026-03-15 11:24:32] total 619876
[2026-03-15 11:24:32] -rw-r--r-- 1 boincer umatlas    585013 Mar 15 09:29 pilot3.tar.gz
[2026-03-15 11:24:32] -rw-r--r-- 1 boincer umatlas      5111 Mar 15 09:38 queuedata.json
[2026-03-15 11:24:32] -rwx------ 1 boincer umatlas     36322 Mar 15 09:39 runpilot2-wrapper.sh
[2026-03-15 11:24:32] -rw-r--r-- 1 boincer umatlas       100 Mar 15 09:39 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-15 11:24:32] -rwxr-xr-x 1 boincer umatlas      7986 Mar 15 09:39 run_atlas
[2026-03-15 11:24:32] -rw-r--r-- 1 boincer umatlas       105 Mar 15 09:39 job.xml
[2026-03-15 11:24:32] -rw-r--r-- 2 boincer umatlas 440772783 Mar 15 09:39 EVNT.46701403._001491.pool.root.1
[2026-03-15 11:24:32] -rw-r--r-- 2 boincer umatlas     15845 Mar 15 09:39 start_atlas.sh
[2026-03-15 11:24:32] drwxrwx--x 2 boincer umatlas      4096 Mar 15 09:39 shared
[2026-03-15 11:24:32] -rw-r--r-- 2 boincer umatlas    597535 Mar 15 09:39 input.tar.gz
[2026-03-15 11:24:32] -rw-r--r-- 1 boincer umatlas         0 Mar 15 09:39 boinc_lockfile
[2026-03-15 11:24:32] -rw-r--r-- 1 boincer umatlas      2561 Mar 15 09:39 pandaJob.out
[2026-03-15 11:24:32] -rw------- 1 boincer umatlas        57 Mar 15 09:39 setup.sh.local
[2026-03-15 11:24:32] -rw------- 1 boincer umatlas   1006481 Mar 15 09:40 agis_schedconf.cvmfs.json
[2026-03-15 11:24:32] -rw------- 1 boincer umatlas   1511579 Mar 15 09:40 agis_ddmendpoints.agis.ALL.json
[2026-03-15 11:24:32] -rw------- 1 boincer umatlas       432 Mar 15 09:40 workernode_map.json
[2026-03-15 11:24:32] drwx------ 5 boincer umatlas      4096 Mar 15 09:40 pilot3
[2026-03-15 11:24:32] -rw-r--r-- 1 boincer umatlas      5909 Mar 15 11:20 init_data.xml
[2026-03-15 11:24:32] -rw------- 1 boincer umatlas 187528321 Mar 15 11:23 HITS.48955010._052577.pool.root.1
[2026-03-15 11:24:32] -rw-r--r-- 1 boincer umatlas       530 Mar 15 11:23 boinc_task_state.xml
[2026-03-15 11:24:32] -rw------- 1 boincer umatlas        95 Mar 15 11:23 pilot_heartbeat.json
[2026-03-15 11:24:32] -rw------- 1 boincer umatlas      1048 Mar 15 11:23 memory_monitor_summary.json
[2026-03-15 11:24:32] -rw------- 1 boincer umatlas    369195 Mar 15 11:23 log.48955010._052577.job.log.tgz.1
[2026-03-15 11:24:32] -rw------- 1 boincer umatlas      6405 Mar 15 11:23 heartbeat.json
[2026-03-15 11:24:32] -rw-r--r-- 1 boincer umatlas      8192 Mar 15 11:24 boinc_mmap_file
[2026-03-15 11:24:32] -rw-r--r-- 1 boincer umatlas        27 Mar 15 11:24 wrapper_checkpoint.txt
[2026-03-15 11:24:32] -rw------- 1 boincer umatlas      4813 Mar 15 11:24 pilotlog.txt
[2026-03-15 11:24:32] -rw------- 1 boincer umatlas    887775 Mar 15 11:24 log.48955010._052577.job.log.1
[2026-03-15 11:24:32] -rw------- 1 boincer umatlas       357 Mar 15 11:24 output.list
[2026-03-15 11:24:32] -rw-r--r-- 1 boincer umatlas       620 Mar 15 11:24 runtime_log
[2026-03-15 11:24:32] -rw------- 1 boincer umatlas   1269760 Mar 15 11:24 result.tar.gz
[2026-03-15 11:24:32] -rw-r--r-- 1 boincer umatlas      9336 Mar 15 11:24 runtime_log.err
[2026-03-15 11:24:32] -rw------- 1 boincer umatlas       658 Mar 15 11:24 lDRMDmar0L9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDm3BvLDmTc4DDn.diag
[2026-03-15 11:24:32] -rw-r--r-- 1 boincer umatlas     20995 Mar 15 11:24 stderr.txt
[2026-03-15 11:24:32] HITS file was successfully produced:
[2026-03-15 11:24:32] -rw------- 1 boincer umatlas 187528321 Mar 15 11:23 shared/HITS.pool.root.1
[2026-03-15 11:24:32]  *** Contents of shared directory: ***
[2026-03-15 11:24:32] total 615428
[2026-03-15 11:24:32] -rw-r--r-- 2 boincer umatlas 440772783 Mar 15 09:39 ATLAS.root_0
[2026-03-15 11:24:32] -rw-r--r-- 2 boincer umatlas     15845 Mar 15 09:39 start_atlas.sh
[2026-03-15 11:24:32] -rw-r--r-- 2 boincer umatlas    597535 Mar 15 09:39 input.tar.gz
[2026-03-15 11:24:32] -rw------- 1 boincer umatlas 187528321 Mar 15 11:23 HITS.pool.root.1
[2026-03-15 11:24:32] -rw------- 1 boincer umatlas   1269760 Mar 15 11:24 result.tar.gz
11:24:33 (2553): run_atlas exited; CPU time 46084.539170
11:24:33 (2553): called boinc_finish(0)

</stderr_txt>
]]>

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