Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
09:41:14 (236643): wrapper (7.7.26015): starting
09:41:14 (236643): wrapper: running run_atlas (--nthreads 12)
[2026-03-15 09:41:14] Arguments: --nthreads 12
[2026-03-15 09:41:14] Threads: 12
[2026-03-15 09:41:14] Checking for CVMFS
[2026-03-15 09:41:14] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-15 09:41:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-15 09:41:14] Running cvmfs_config stat atlas.cern.ch
[2026-03-15 09:41:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-15 09:41:14] 2.13.3.0 870035 110582 208772 157315 1 119 37579629 39288832 5175 16776704 0 63078973 99.776 73833974 37559 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-15 09:41:14] CVMFS is ok
[2026-03-15 09:41:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-15 09:41:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-15 09:41:14] Further information can be found at the LHC@home message board.
[2026-03-15 09:41:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-15 09:41:14] Checking for apptainer binary...
[2026-03-15 09:41:14] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-15 09:41:14] Running /usr/bin/apptainer --version
[2026-03-15 09:41:14] apptainer version 1.4.5-2.el9
[2026-03-15 09:41:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-15 09:41:14] c-210-20.aglt2.org
[2026-03-15 09:41:14] apptainer works
[2026-03-15 09:41:14] Set ATHENA_PROC_NUMBER=12
[2026-03-15 09:41:14] Set ATHENA_CORE_NUMBER=12
[2026-03-15 09:41:14] Starting ATLAS job with PandaID=7055844494
[2026-03-15 09:41:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-16 01:15:03]  *** The last 200 lines of the pilot log: ***
[2026-03-16 01:15:03] 2026-03-16 05:14:46,403 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-7055844494/jobReport.json
[2026-03-16 01:15:03] 2026-03-16 05:14:46,405 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-03-16 01:15:03] 2026-03-16 05:14:46,405 | INFO     | this job has now completed (state=finished)
[2026-03-16 01:15:03] 2026-03-16 05:14:46,405 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-16 01:15:03] 2026-03-16 05:14:46,405 | INFO     | log transfer has been attempted: DONE
[2026-03-16 01:15:03] 2026-03-16 05:14:46,406 | INFO     | job 7055844494 has finished - writing final server update
[2026-03-16 01:15:03] 2026-03-16 05:14:46,406 | INFO     | total number of processed events: 2050 (read)
[2026-03-16 01:15:03] 2026-03-16 05:14:46,409 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7055844494/memory_monitor_summary.json (trf name=prmon)
[2026-03-16 01:15:03] 2026-03-16 05:14:46,410 | INFO     | extracted standard info from prmon json
[2026-03-16 01:15:03] 2026-03-16 05:14:46,410 | INFO     | extracted standard memory fields from prmon json
[2026-03-16 01:15:03] 2026-03-16 05:14:46,410 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-16 01:15:03] 2026-03-16 05:14:46,418 | INFO     | fitting pss+swap vs Time
[2026-03-16 01:15:03] 2026-03-16 05:14:46,418 | INFO     | sum of square deviations: 239858119865.26053
[2026-03-16 01:15:03] 2026-03-16 05:14:46,430 | INFO     | sum of deviations: 3995867564607.629
[2026-03-16 01:15:03] 2026-03-16 05:14:46,430 | INFO     | mean x: 1773610085.208061
[2026-03-16 01:15:03] 2026-03-16 05:14:46,430 | INFO     | mean y: 3600905.3474945533
[2026-03-16 01:15:03] 2026-03-16 05:14:46,430 | INFO     | intersect: -29543495585.382206
[2026-03-16 01:15:03] 2026-03-16 05:14:46,431 | INFO     | chi2: 6.761203287889877
[2026-03-16 01:15:03] 2026-03-16 05:14:46,431 | INFO     | sum of square deviations: 235960190113.09314
[2026-03-16 01:15:03] 2026-03-16 05:14:46,443 | INFO     | sum of deviations: 4368011888496.8994
[2026-03-16 01:15:03] 2026-03-16 05:14:46,443 | INFO     | mean x: 1773609932.717415
[2026-03-16 01:15:03] 2026-03-16 05:14:46,443 | INFO     | mean y: 3615456.5848849947
[2026-03-16 01:15:03] 2026-03-16 05:14:46,443 | INFO     | intersect: -32828826608.97173
[2026-03-16 01:15:03] 2026-03-16 05:14:46,444 | INFO     | chi2: 3.6451647076006584
[2026-03-16 01:15:03] 2026-03-16 05:14:46,444 | INFO     | current chi2=3.6451647076006584 (change=46.08704172333372 %)
[2026-03-16 01:15:03] 2026-03-16 05:14:46,444 | INFO     | sum of square deviations: 232104670826.71793
[2026-03-16 01:15:03] 2026-03-16 05:14:46,456 | INFO     | sum of deviations: 4498226771590.94
[2026-03-16 01:15:03] 2026-03-16 05:14:46,456 | INFO     | mean x: 1773609780.225771
[2026-03-16 01:15:03] 2026-03-16 05:14:46,456 | INFO     | mean y: 3620593.1563876653
[2026-03-16 01:15:03] 2026-03-16 05:14:46,456 | INFO     | intersect: -34369229239.42318
[2026-03-16 01:15:03] 2026-03-16 05:14:46,456 | INFO     | chi2: 2.8216803435504274
[2026-03-16 01:15:03] 2026-03-16 05:14:46,457 | INFO     | current chi2=2.8216803435504274 (change=22.591142790699013 %)
[2026-03-16 01:15:03] 2026-03-16 05:14:46,457 | INFO     | right removable region: 907
[2026-03-16 01:15:03] 2026-03-16 05:14:46,457 | INFO     | sum of square deviations: 235959233633.09302
[2026-03-16 01:15:03] 2026-03-16 05:14:46,469 | INFO     | sum of deviations: 3617638598317.6606
[2026-03-16 01:15:03] 2026-03-16 05:14:46,469 | INFO     | mean x: 1773610237.717415
[2026-03-16 01:15:03] 2026-03-16 05:14:46,469 | INFO     | mean y: 3615692.4676889377
[2026-03-16 01:15:03] 2026-03-16 05:14:46,469 | INFO     | intersect: -27188712217.50907
[2026-03-16 01:15:03] 2026-03-16 05:14:46,469 | INFO     | chi2: 4.116195472282467
[2026-03-16 01:15:03] 2026-03-16 05:14:46,469 | INFO     | current chi2=4.116195472282467 (change=39.12037107869446 %)
[2026-03-16 01:15:03] 2026-03-16 05:14:46,470 | INFO     | sum of square deviations: 232103703914.24243
[2026-03-16 01:15:03] 2026-03-16 05:14:46,481 | INFO     | sum of deviations: 3512779558278.7725
[2026-03-16 01:15:03] 2026-03-16 05:14:46,481 | INFO     | mean x: 1773610390.2092512
[2026-03-16 01:15:03] 2026-03-16 05:14:46,481 | INFO     | mean y: 3619839.122246696
[2026-03-16 01:15:03] 2026-03-16 05:14:46,482 | INFO     | intersect: -26839132852.92382
[2026-03-16 01:15:03] 2026-03-16 05:14:46,482 | INFO     | chi2: 4.072148412312881
[2026-03-16 01:15:03] 2026-03-16 05:14:46,482 | INFO     | current chi2=4.072148412312881 (change=1.0700915509525404 %)
[2026-03-16 01:15:03] 2026-03-16 05:14:46,482 | INFO     | left removable region: 20
[2026-03-16 01:15:03] 2026-03-16 05:14:46,483 | INFO     | sum of square deviations: 216368633885.5394
[2026-03-16 01:15:03] 2026-03-16 05:14:46,496 | INFO     | sum of deviations: 3827053460060.2285
[2026-03-16 01:15:03] 2026-03-16 05:14:46,496 | INFO     | mean x: 1773610359.718151
[2026-03-16 01:15:03] 2026-03-16 05:14:46,496 | INFO     | mean y: 3646855.6009019166
[2026-03-16 01:15:03] 2026-03-16 05:14:46,496 | INFO     | intersect: -31367358923.123756
[2026-03-16 01:15:03] 2026-03-16 05:14:46,497 | INFO     | chi2: 0.07378173506856789
[2026-03-16 01:15:03] 2026-03-16 05:14:46,497 | INFO     | current memory leak: 17.69 B/s (using 887 data points, chi2=0.07)
[2026-03-16 01:15:03] 2026-03-16 05:14:46,497 | INFO     | could have reported an average CPU frequency of 2679 MHz (34 samples)
[2026-03-16 01:15:03] 2026-03-16 05:14:46,498 | INFO     | ..............................
[2026-03-16 01:15:03] 2026-03-16 05:14:46,498 | INFO     | . Timing measurements:
[2026-03-16 01:15:03] 2026-03-16 05:14:46,498 | INFO     | . get job = 0 s
[2026-03-16 01:15:03] 2026-03-16 05:14:46,498 | INFO     | . initial setup = 6 s
[2026-03-16 01:15:03] 2026-03-16 05:14:46,498 | INFO     | . payload setup = 9 s
[2026-03-16 01:15:03] 2026-03-16 05:14:46,498 | INFO     | . stage-in = 0 s
[2026-03-16 01:15:03] 2026-03-16 05:14:46,498 | INFO     | . payload execution = 55969 s
[2026-03-16 01:15:03] 2026-03-16 05:14:46,498 | INFO     | . stage-out = 3 s
[2026-03-16 01:15:03] 2026-03-16 05:14:46,498 | INFO     | . log creation = 0 s
[2026-03-16 01:15:03] 2026-03-16 05:14:46,498 | INFO     | ..............................
[2026-03-16 01:15:03] 2026-03-16 05:14:46,549 | INFO     | 
[2026-03-16 01:15:03] 2026-03-16 05:14:46,549 | INFO     | job summary report
[2026-03-16 01:15:03] 2026-03-16 05:14:46,549 | INFO     | --------------------------------------------------
[2026-03-16 01:15:03] 2026-03-16 05:14:46,549 | INFO     | PanDA job id: 7055844494
[2026-03-16 01:15:03] 2026-03-16 05:14:46,549 | INFO     | task id: 49147786
[2026-03-16 01:15:03] 2026-03-16 05:14:46,549 | INFO     | errors: (none)
[2026-03-16 01:15:03] 2026-03-16 05:14:46,549 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-16 01:15:03] 2026-03-16 05:14:46,549 | INFO     | pilot state: finished 
[2026-03-16 01:15:03] 2026-03-16 05:14:46,549 | INFO     | transexitcode: 0
[2026-03-16 01:15:03] 2026-03-16 05:14:46,549 | INFO     | exeerrorcode: 0
[2026-03-16 01:15:03] 2026-03-16 05:14:46,549 | INFO     | exeerrordiag: 
[2026-03-16 01:15:03] 2026-03-16 05:14:46,549 | INFO     | exitcode: 0
[2026-03-16 01:15:03] 2026-03-16 05:14:46,549 | INFO     | exitmsg: OK
[2026-03-16 01:15:03] 2026-03-16 05:14:46,549 | INFO     | cpuconsumptiontime: 539059 s
[2026-03-16 01:15:03] 2026-03-16 05:14:46,549 | INFO     | nevents: 2050
[2026-03-16 01:15:03] 2026-03-16 05:14:46,550 | INFO     | neventsw: 0
[2026-03-16 01:15:03] 2026-03-16 05:14:46,550 | INFO     | pid: 245052
[2026-03-16 01:15:03] 2026-03-16 05:14:46,550 | INFO     | pgrp: 245052
[2026-03-16 01:15:03] 2026-03-16 05:14:46,550 | INFO     | corecount: 12
[2026-03-16 01:15:03] 2026-03-16 05:14:46,550 | INFO     | event service: False
[2026-03-16 01:15:03] 2026-03-16 05:14:46,550 | INFO     | sizes: {0: 2280675, 1: 2280965, 11: 2280965, 55982: 2333044, 55986: 2342098, 55987: 2342288}
[2026-03-16 01:15:03] 2026-03-16 05:14:46,550 | INFO     | --------------------------------------------------
[2026-03-16 01:15:03] 2026-03-16 05:14:46,550 | INFO     | 
[2026-03-16 01:15:03] 2026-03-16 05:14:46,550 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-03-16 01:15:03] 2026-03-16 05:14:46,561 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-16 01:15:03] 2026-03-16 05:14:46,561 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-16 01:15:03] 2026-03-16 05:14:46,561 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-16 01:15:03] 2026-03-16 05:14:46,561 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-16 01:15:03] 2026-03-16 05:14:46,561 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-16 01:15:03] 2026-03-16 05:14:46,561 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-16 01:15:03] 2026-03-16 05:14:46,561 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-16 01:15:03] 2026-03-16 05:14:46,561 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-16 01:15:03] 2026-03-16 05:14:46,561 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-16 01:15:03] 2026-03-16 05:14:46,561 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-16 01:15:03] 2026-03-16 05:14:46,562 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-16 01:15:03] 2026-03-16 05:14:46,562 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-16 01:15:03] 2026-03-16 05:14:46,562 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-16 01:15:03] 2026-03-16 05:14:46,562 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-16 01:15:03] 2026-03-16 05:14:46,562 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-16 01:15:03] 2026-03-16 05:14:46,562 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-16 01:15:03] 2026-03-16 05:14:46,562 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-16 01:15:03] 2026-03-16 05:14:46,562 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-16 01:15:03] 2026-03-16 05:14:46,562 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-16 01:15:03] 2026-03-16 05:14:46,562 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-16 01:15:03] 2026-03-16 05:14:46,562 | INFO     | job 7055844494 has completed (purged errors)
[2026-03-16 01:15:03] 2026-03-16 05:14:46,562 | INFO     | overall cleanup function is called
[2026-03-16 01:15:03] 2026-03-16 05:14:47,576 | INFO     | --- collectZombieJob: --- 10, [245052]
[2026-03-16 01:15:03] 2026-03-16 05:14:47,576 | INFO     | zombie collector waiting for pid 245052
[2026-03-16 01:15:03] 2026-03-16 05:14:47,576 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-16 01:15:03] 2026-03-16 05:14:47,576 | INFO     | collected zombie processes
[2026-03-16 01:15:03] 2026-03-16 05:14:47,576 | INFO     | will attempt to kill all subprocesses of pid=245052
[2026-03-16 01:15:03] 2026-03-16 05:14:47,688 | INFO     | process IDs to be killed: [245052] (in reverse order)
[2026-03-16 01:15:03] 2026-03-16 05:14:47,722 | WARNING  | found no corresponding commands to process id(s)
[2026-03-16 01:15:03] 2026-03-16 05:14:47,722 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-16 01:15:03] 2026-03-16 05:14:47,725 | INFO     | did not find any defunct processes belonging to 245052
[2026-03-16 01:15:03] 2026-03-16 05:14:47,728 | INFO     | did not find any defunct processes belonging to 245052
[2026-03-16 01:15:03] 2026-03-16 05:14:47,728 | INFO     | ready for new job
[2026-03-16 01:15:03] 2026-03-16 05:14:47,728 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-16 01:15:03] 2026-03-16 05:14:47,731 | INFO     | **************************************
[2026-03-16 01:15:03] 2026-03-16 05:14:47,731 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-16 01:15:03] 2026-03-16 05:14:47,731 | INFO     | **************************************
[2026-03-16 01:15:03] 2026-03-16 05:14:47,731 | INFO     | 
[2026-03-16 01:15:03] 2026-03-16 05:14:47,732 | INFO     | architecture information:
[2026-03-16 01:15:03] 2026-03-16 05:14:47,733 | INFO     | executing command: cat /etc/os-release
[2026-03-16 01:15:03] 2026-03-16 05:14:47,741 | INFO     | cat /etc/os-release:
[2026-03-16 01:15:03] NAME="CentOS Linux"
[2026-03-16 01:15:03] VERSION="7 (Core)"
[2026-03-16 01:15:03] ID="centos"
[2026-03-16 01:15:03] ID_LIKE="rhel fedora"
[2026-03-16 01:15:03] VERSION_ID="7"
[2026-03-16 01:15:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-16 01:15:03] ANSI_COLOR="0;31"
[2026-03-16 01:15:03] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-16 01:15:03] HOME_URL="https://www.centos.org/"
[2026-03-16 01:15:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-16 01:15:03] 
[2026-03-16 01:15:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-16 01:15:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-16 01:15:03] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-16 01:15:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-16 01:15:03] 
[2026-03-16 01:15:03] 2026-03-16 05:14:47,741 | INFO     | **************************************
[2026-03-16 01:15:03] 2026-03-16 05:14:48,244 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-03-16 01:15:03] 2026-03-16 05:14:48,252 | INFO     | sufficient remaining disk space (50284462080 B)
[2026-03-16 01:15:03] 2026-03-16 05:14:48,252 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-16 01:15:03] 2026-03-16 05:14:48,253 | INFO     | current server update state: UPDATING_FINAL
[2026-03-16 01:15:03] 2026-03-16 05:14:48,253 | INFO     | update_server=False
[2026-03-16 01:15:03] 2026-03-16 05:14:48,253 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-16 01:15:03] 2026-03-16 05:14:48,253 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-03-16 01:15:03] 2026-03-16 05:14:48,253 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-16 01:15:03] 2026-03-16 05:14:48,253 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-16 01:15:03] 2026-03-16 05:14:48,253 | INFO     | found 0 job(s) in 20 queues
[2026-03-16 01:15:03] 2026-03-16 05:14:48,254 | INFO     | aborting loop
[2026-03-16 01:15:03] 2026-03-16 05:14:48,254 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-16 01:15:03] 2026-03-16 05:14:48,254 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-16 01:15:03] 2026-03-16 05:14:48,655 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-16 01:15:03] 2026-03-16 05:14:48,744 | INFO     | all data control threads have been joined
[2026-03-16 01:15:03] 2026-03-16 05:14:49,258 | INFO     | [job] retrieve thread has finished
[2026-03-16 01:15:03] 2026-03-16 05:14:49,259 | INFO     | [job] queue monitor thread has finished
[2026-03-16 01:15:03] 2026-03-16 05:14:49,259 | INFO     | [job] job monitor thread has finished
[2026-03-16 01:15:03] 2026-03-16 05:14:49,366 | INFO     | all payload control threads have been joined
[2026-03-16 01:15:03] 2026-03-16 05:14:49,454 | INFO     | [payload] validate_post thread has finished
[2026-03-16 01:15:03] 2026-03-16 05:14:49,749 | INFO     | [data] control thread has finished
[2026-03-16 01:15:03] 2026-03-16 05:14:49,822 | INFO     | all job control threads have been joined
[2026-03-16 01:15:03] 2026-03-16 05:14:50,064 | INFO     | [payload] failed_post thread has finished
[2026-03-16 01:15:03] 2026-03-16 05:14:50,186 | INFO     | [job] create_data_payload thread has finished
[2026-03-16 01:15:03] 2026-03-16 05:14:50,186 | INFO     | [data] copytool_in thread has finished
[2026-03-16 01:15:03] 2026-03-16 05:14:50,252 | INFO     | [payload] validate_pre thread has finished
[2026-03-16 01:15:03] 2026-03-16 05:14:50,371 | INFO     | [payload] control thread has finished
[2026-03-16 01:15:03] 2026-03-16 05:14:50,531 | INFO     | [payload] execute_payloads thread has finished
[2026-03-16 01:15:03] 2026-03-16 05:14:50,661 | INFO     | [data] copytool_out thread has finished
[2026-03-16 01:15:03] 2026-03-16 05:14:50,700 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-16 01:15:03] 2026-03-16 05:14:50,751 | INFO     | [job] validate thread has finished
[2026-03-16 01:15:03] 2026-03-16 05:14:50,827 | INFO     | [job] control thread has finished
[2026-03-16 01:15:03] 2026-03-16 05:14:51,737 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-16 01:15:03] 2026-03-16 05:14:55,743 | INFO     | [data] queue_monitor thread has finished
[2026-03-16 01:15:03] 2026-03-16 05:14:58,304 | INFO     | [monitor] cgroup control has ended
[2026-03-16 01:15:03] 2026-03-16 05:14:58,811 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140307379906368)>', '<ExcThread(monitor, started 140307001743104)>']
[2026-03-16 01:15:03] 2026-03-16 05:14:59,309 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-16 01:15:03] 2026-03-16 05:14:59,309 | INFO     | [monitor] control thread has ended
[2026-03-16 01:15:03] 2026-03-16 05:15:03,837 | INFO     | all workflow threads have been joined
[2026-03-16 01:15:03] 2026-03-16 05:15:03,837 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-16 01:15:03] 2026-03-16 05:15:03,837 | INFO     | traces error code: 0
[2026-03-16 01:15:03] 2026-03-16 05:15:03,837 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-16 01:15:03] 2026-03-16 05:15:03,905 [wrapper] ==== pilot stdout END ====
[2026-03-16 01:15:03] 2026-03-16 05:15:03,907 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-16 01:15:03] 2026-03-16 05:15:03,909 [wrapper] pilotpid: 240318
[2026-03-16 01:15:03] 2026-03-16 05:15:03,911 [wrapper] Pilot exit status: 0
[2026-03-16 01:15:03] 2026-03-16 05:15:03,917 [wrapper] pandaids: 7055844494
[2026-03-16 01:15:03] 2026-03-16 05:15:03,940 [wrapper] cleanup supervisor_pilot 1297415 240319
[2026-03-16 01:15:03] 2026-03-16 05:15:03,942 [wrapper] Test setup, not cleaning
[2026-03-16 01:15:03] 2026-03-16 05:15:03,944 [wrapper] apfmon messages muted
[2026-03-16 01:15:03] 2026-03-16 05:15:03,945 [wrapper] ==== wrapper stdout END ====
[2026-03-16 01:15:03] 2026-03-16 05:15:03,947 [wrapper] ==== wrapper stderr END ====
[2026-03-16 01:15:03]  *** Error codes and diagnostics ***
[2026-03-16 01:15:03]     "exeErrorCode": 0,
[2026-03-16 01:15:03]     "exeErrorDiag": "",
[2026-03-16 01:15:03]     "pilotErrorCode": 0,
[2026-03-16 01:15:03]     "pilotErrorDiag": "",
[2026-03-16 01:15:03]  *** Listing of results directory ***
[2026-03-16 01:15:04] total 2041212
[2026-03-16 01:15:04] -rw-r--r--. 1 boincer umatlas     585013 Mar 15 08:37 pilot3.tar.gz
[2026-03-16 01:15:04] -rw-r--r--. 1 boincer umatlas       5111 Mar 15 08:39 queuedata.json
[2026-03-16 01:15:04] -rwx------. 1 boincer umatlas      36322 Mar 15 08:40 runpilot2-wrapper.sh
[2026-03-16 01:15:04] -rw-r--r--. 1 boincer umatlas        100 Mar 15 09:41 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-16 01:15:04] -rwxr-xr-x. 1 boincer umatlas       7986 Mar 15 09:41 run_atlas
[2026-03-16 01:15:04] -rw-r--r--. 1 boincer umatlas        105 Mar 15 09:41 job.xml
[2026-03-16 01:15:04] -rw-r--r--. 2 boincer umatlas  330896106 Mar 15 09:41 EVNT.49147771._000001.pool.root.1
[2026-03-16 01:15:04] -rw-r--r--. 2 boincer umatlas      15845 Mar 15 09:41 start_atlas.sh
[2026-03-16 01:15:04] drwxrwx--x. 2 boincer umatlas       4096 Mar 15 09:41 shared
[2026-03-16 01:15:04] -rw-r--r--. 2 boincer umatlas     597712 Mar 15 09:41 input.tar.gz
[2026-03-16 01:15:04] -rw-r--r--. 1 boincer umatlas          0 Mar 15 09:41 boinc_lockfile
[2026-03-16 01:15:04] -rw-r--r--. 1 boincer umatlas       2953 Mar 15 09:41 pandaJob.out
[2026-03-16 01:15:04] -rw-------. 1 boincer umatlas         57 Mar 15 09:41 setup.sh.local
[2026-03-16 01:15:04] -rw-------. 1 boincer umatlas    1006481 Mar 15 09:41 agis_schedconf.cvmfs.json
[2026-03-16 01:15:04] -rw-------. 1 boincer umatlas        434 Mar 15 09:41 workernode_map.json
[2026-03-16 01:15:04] drwx------. 5 boincer umatlas       4096 Mar 15 09:41 pilot3
[2026-03-16 01:15:04] -rw-r--r--. 1 boincer umatlas        532 Mar 16 01:05 boinc_task_state.xml
[2026-03-16 01:15:04] -rw-r--r--. 1 boincer umatlas       6663 Mar 16 01:11 init_data.xml
[2026-03-16 01:15:04] -rw-------. 1 boincer umatlas 1734303389 Mar 16 01:13 HITS.49147786._000001.pool.root.1
[2026-03-16 01:15:04] -rw-------. 1 boincer umatlas         95 Mar 16 01:14 pilot_heartbeat.json
[2026-03-16 01:15:04] -rw-------. 1 boincer umatlas       1050 Mar 16 01:14 memory_monitor_summary.json
[2026-03-16 01:15:04] -rw-------. 1 boincer umatlas    1511579 Mar 16 01:14 agis_ddmendpoints.agis.ALL.json
[2026-03-16 01:15:04] -rw-------. 1 boincer umatlas    2822562 Mar 16 01:14 log.49147786._000001.job.log.tgz.1
[2026-03-16 01:15:04] -rw-------. 1 boincer umatlas       7014 Mar 16 01:14 heartbeat.json
[2026-03-16 01:15:04] -rw-------. 1 boincer umatlas       4548 Mar 16 01:15 pilotlog.txt
[2026-03-16 01:15:04] -rw-r--r--. 1 boincer umatlas       8192 Mar 16 01:15 boinc_mmap_file
[2026-03-16 01:15:04] -rw-r--r--. 1 boincer umatlas         29 Mar 16 01:15 wrapper_checkpoint.txt
[2026-03-16 01:15:04] -rw-------. 1 boincer umatlas    7706144 Mar 16 01:15 log.49147786._000001.job.log.1
[2026-03-16 01:15:04] -rw-------. 1 boincer umatlas        353 Mar 16 01:15 output.list
[2026-03-16 01:15:04] -rw-r--r--. 1 boincer umatlas        620 Mar 16 01:15 runtime_log
[2026-03-16 01:15:04] -rw-------. 1 boincer umatlas   10547200 Mar 16 01:15 result.tar.gz
[2026-03-16 01:15:04] -rw-------. 1 boincer umatlas        660 Mar 16 01:15 upmNDmbwzL9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDm95uLDmJdko9m.diag
[2026-03-16 01:15:04] -rw-r--r--. 1 boincer umatlas       9344 Mar 16 01:15 runtime_log.err
[2026-03-16 01:15:04] -rw-r--r--. 1 boincer umatlas      21133 Mar 16 01:15 stderr.txt
[2026-03-16 01:15:04] HITS file was successfully produced:
[2026-03-16 01:15:04] -rw-------. 1 boincer umatlas 1734303389 Mar 16 01:13 shared/HITS.pool.root.1
[2026-03-16 01:15:04]  *** Contents of shared directory: ***
[2026-03-16 01:15:04] total 2027708
[2026-03-16 01:15:04] -rw-r--r--. 2 boincer umatlas  330896106 Mar 15 09:41 ATLAS.root_0
[2026-03-16 01:15:04] -rw-r--r--. 2 boincer umatlas      15845 Mar 15 09:41 start_atlas.sh
[2026-03-16 01:15:04] -rw-r--r--. 2 boincer umatlas     597712 Mar 15 09:41 input.tar.gz
[2026-03-16 01:15:04] -rw-------. 1 boincer umatlas 1734303389 Mar 16 01:13 HITS.pool.root.1
[2026-03-16 01:15:04] -rw-------. 1 boincer umatlas   10547200 Mar 16 01:15 result.tar.gz
01:15:05 (236643): run_atlas exited; CPU time 539899.706309
01:15:05 (236643): called boinc_finish(0)

</stderr_txt>
]]>

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