Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:11:22 (20293): wrapper (7.7.26015): starting
16:11:22 (20293): wrapper: running run_atlas (--nthreads 8)
[2026-03-15 16:11:22] Arguments: --nthreads 8
[2026-03-15 16:11:22] Threads: 8
[2026-03-15 16:11:22] Checking for CVMFS
[2026-03-15 16:11:22] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-15 16:11:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-15 16:11:24] Running cvmfs_config stat atlas.cern.ch
[2026-03-15 16:11:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-15 16:11:25] 2.11.2.0 1035 129179 136432 157318 3 53 16146519 25165825 4652 130560 160 38011151 99.812 28341434 1002 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-03-15 16:11:25] CVMFS is ok
[2026-03-15 16:11:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-15 16:11:25] Checking for apptainer binary...
[2026-03-15 16:11:25] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-15 16:11:25] Running /usr/bin/apptainer --version
[2026-03-15 16:11:26] apptainer version 1.3.2-1.el7
[2026-03-15 16:11:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-15 16:11:54] cg-vwn358.simple-grid.lan
[2026-03-15 16:11:54] apptainer works
[2026-03-15 16:11:54] Set ATHENA_PROC_NUMBER=8
[2026-03-15 16:11:54] Set ATHENA_CORE_NUMBER=8
[2026-03-15 16:11:54] Starting ATLAS job with PandaID=7055834540
[2026-03-15 16:11:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-18 21:40:36]  *** The last 200 lines of the pilot log: ***
[2026-03-18 21:40:36] 2026-03-18 20:39:44,281 | INFO     | time since job start (278547s) is within the limit (345600.0s)
[2026-03-18 21:40:36] 2026-03-18 20:39:44,621 | INFO     | monitor loop #19755: job 0:7055834540 is in state 'finished'
[2026-03-18 21:40:36] 2026-03-18 20:39:44,622 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-18 21:40:36] 2026-03-18 20:39:46,291 | INFO     | time since job start (278549s) is within the limit (345600.0s)
[2026-03-18 21:40:36] 2026-03-18 20:39:46,520 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-18 21:40:36] 2026-03-18 20:39:46,653 | INFO     | job 7055834540 has state=finished
[2026-03-18 21:40:36] 2026-03-18 20:39:46,654 | INFO     | preparing for final server update for job 7055834540 in state='finished'
[2026-03-18 21:40:36] 2026-03-18 20:39:46,654 | INFO     | reading metadata from: /var/lib/boinc/slots/7/PanDA_Pilot-7055834540/jobReport.json
[2026-03-18 21:40:36] 2026-03-18 20:39:46,657 | INFO     | added worker_node to metadata from /var/lib/boinc/slots/7/workernode_map.json
[2026-03-18 21:40:36] 2026-03-18 20:39:46,657 | INFO     | this job has now completed (state=finished)
[2026-03-18 21:40:36] 2026-03-18 20:39:46,657 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-18 21:40:36] 2026-03-18 20:39:46,658 | INFO     | log transfer has been attempted: DONE
[2026-03-18 21:40:36] 2026-03-18 20:39:46,658 | INFO     | job 7055834540 has finished - writing final server update
[2026-03-18 21:40:36] 2026-03-18 20:39:46,658 | INFO     | total number of processed events: 2050 (read)
[2026-03-18 21:40:36] 2026-03-18 20:39:46,660 | INFO     | using path: /var/lib/boinc/slots/7/PanDA_Pilot-7055834540/memory_monitor_summary.json (trf name=prmon)
[2026-03-18 21:40:36] 2026-03-18 20:39:46,661 | INFO     | extracted standard info from prmon json
[2026-03-18 21:40:36] 2026-03-18 20:39:46,661 | INFO     | extracted standard memory fields from prmon json
[2026-03-18 21:40:36] 2026-03-18 20:39:46,661 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-18 21:40:36] 2026-03-18 20:39:46,744 | INFO     | fitting pss+swap vs Time
[2026-03-18 21:40:36] 2026-03-18 20:39:46,752 | INFO     | sum of square deviations: 29421091509856.16
[2026-03-18 21:40:36] 2026-03-18 20:39:47,150 | INFO     | monitor loop #19756: job 0:7055834540 is in state 'finished'
[2026-03-18 21:40:36] 2026-03-18 20:39:47,151 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-18 21:40:36] 2026-03-18 20:39:47,491 | INFO     | sum of deviations: 34773917287192.75
[2026-03-18 21:40:36] 2026-03-18 20:39:47,491 | INFO     | mean x: 1773727232.028941
[2026-03-18 21:40:36] 2026-03-18 20:39:47,492 | INFO     | mean y: 3021472.65314624
[2026-03-18 21:40:36] 2026-03-18 20:39:47,492 | INFO     | intersect: -2093414821.559559
[2026-03-18 21:40:36] 2026-03-18 20:39:47,497 | INFO     | chi2: 31.31139922410359
[2026-03-18 21:40:36] 2026-03-18 20:39:47,504 | INFO     | sum of square deviations: 29324440319710.89
[2026-03-18 21:40:36] 2026-03-18 20:39:48,228 | INFO     | sum of deviations: 36365335725856.9
[2026-03-18 21:40:36] 2026-03-18 20:39:48,228 | INFO     | mean x: 1773727079.5300703
[2026-03-18 21:40:36] 2026-03-18 20:39:48,228 | INFO     | mean y: 3023983.5076821772
[2026-03-18 21:40:36] 2026-03-18 20:39:48,229 | INFO     | intersect: -2196580852.251059
[2026-03-18 21:40:36] 2026-03-18 20:39:48,233 | INFO     | chi2: 28.248524077428165
[2026-03-18 21:40:36] 2026-03-18 20:39:48,234 | INFO     | current chi2=28.248524077428165 (change=9.781981075817319 %)
[2026-03-18 21:40:36] 2026-03-18 20:39:48,234 | INFO     | right removable region: 4555
[2026-03-18 21:40:36] 2026-03-18 20:39:48,241 | INFO     | sum of square deviations: 29324437456980.836
[2026-03-18 21:40:36] 2026-03-18 20:39:48,318 | INFO     | time since job start (278551s) is within the limit (345600.0s)
[2026-03-18 21:40:36] 2026-03-18 20:39:48,942 | INFO     | sum of deviations: 32728688796109.07
[2026-03-18 21:40:36] 2026-03-18 20:39:48,942 | INFO     | mean x: 1773727384.5300703
[2026-03-18 21:40:36] 2026-03-18 20:39:48,943 | INFO     | mean y: 3024699.5623353818
[2026-03-18 21:40:36] 2026-03-18 20:39:48,943 | INFO     | intersect: -1976613329.7292247
[2026-03-18 21:40:36] 2026-03-18 20:39:48,948 | INFO     | chi2: 26.55950005208303
[2026-03-18 21:40:36] 2026-03-18 20:39:48,949 | INFO     | current chi2=26.55950005208303 (change=15.176259412778126 %)
[2026-03-18 21:40:36] 2026-03-18 20:39:48,949 | INFO     | left removable region: 10
[2026-03-18 21:40:36] 2026-03-18 20:39:48,956 | INFO     | sum of square deviations: 29112547575027.2
[2026-03-18 21:40:36] 2026-03-18 20:39:49,668 | INFO     | monitor loop #19757: job 0:7055834540 is in state 'finished'
[2026-03-18 21:40:36] 2026-03-18 20:39:49,669 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-18 21:40:36] 2026-03-18 20:39:49,673 | INFO     | sum of deviations: 32759223170224.836
[2026-03-18 21:40:36] 2026-03-18 20:39:49,674 | INFO     | mean x: 1773727354.0325632
[2026-03-18 21:40:36] 2026-03-18 20:39:49,674 | INFO     | mean y: 3030642.102310231
[2026-03-18 21:40:36] 2026-03-18 20:39:49,674 | INFO     | intersect: -1992876108.5569322
[2026-03-18 21:40:36] 2026-03-18 20:39:49,679 | INFO     | chi2: 19.06867961667429
[2026-03-18 21:40:36] 2026-03-18 20:39:49,680 | INFO     | current memory leak: 1.13 B/s (using 4545 data points, chi2=19.07)
[2026-03-18 21:40:36] 2026-03-18 20:39:49,683 | INFO     | could have reported an average CPU frequency of 1999 MHz (157 samples)
[2026-03-18 21:40:36] 2026-03-18 20:39:49,684 | INFO     | ..............................
[2026-03-18 21:40:36] 2026-03-18 20:39:49,684 | INFO     | . Timing measurements:
[2026-03-18 21:40:36] 2026-03-18 20:39:49,684 | INFO     | . get job = 0 s
[2026-03-18 21:40:36] 2026-03-18 20:39:49,684 | INFO     | . initial setup = 105 s
[2026-03-18 21:40:36] 2026-03-18 20:39:49,684 | INFO     | . payload setup = 174 s
[2026-03-18 21:40:36] 2026-03-18 20:39:49,684 | INFO     | . stage-in = 0 s
[2026-03-18 21:40:36] 2026-03-18 20:39:49,684 | INFO     | . payload execution = 278347 s
[2026-03-18 21:40:36] 2026-03-18 20:39:49,684 | INFO     | . stage-out = 8 s
[2026-03-18 21:40:36] 2026-03-18 20:39:49,684 | INFO     | . log creation = 3 s
[2026-03-18 21:40:36] 2026-03-18 20:39:49,684 | INFO     | ..............................
[2026-03-18 21:40:36] 2026-03-18 20:39:49,809 | INFO     | 
[2026-03-18 21:40:36] 2026-03-18 20:39:49,809 | INFO     | job summary report
[2026-03-18 21:40:36] 2026-03-18 20:39:49,809 | INFO     | --------------------------------------------------
[2026-03-18 21:40:36] 2026-03-18 20:39:49,810 | INFO     | PanDA job id: 7055834540
[2026-03-18 21:40:36] 2026-03-18 20:39:49,810 | INFO     | task id: 49146346
[2026-03-18 21:40:36] 2026-03-18 20:39:49,810 | INFO     | errors: (none)
[2026-03-18 21:40:36] 2026-03-18 20:39:49,810 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-18 21:40:36] 2026-03-18 20:39:49,810 | INFO     | pilot state: finished 
[2026-03-18 21:40:36] 2026-03-18 20:39:49,810 | INFO     | transexitcode: 0
[2026-03-18 21:40:36] 2026-03-18 20:39:49,810 | INFO     | exeerrorcode: 0
[2026-03-18 21:40:36] 2026-03-18 20:39:49,810 | INFO     | exeerrordiag: 
[2026-03-18 21:40:36] 2026-03-18 20:39:49,810 | INFO     | exitcode: 0
[2026-03-18 21:40:36] 2026-03-18 20:39:49,811 | INFO     | exitmsg: OK
[2026-03-18 21:40:36] 2026-03-18 20:39:49,811 | INFO     | cpuconsumptiontime: 1067310 s
[2026-03-18 21:40:36] 2026-03-18 20:39:49,811 | INFO     | nevents: 2050
[2026-03-18 21:40:36] 2026-03-18 20:39:49,811 | INFO     | neventsw: 0
[2026-03-18 21:40:36] 2026-03-18 20:39:49,811 | INFO     | pid: 28855
[2026-03-18 21:40:36] 2026-03-18 20:39:49,811 | INFO     | pgrp: 28855
[2026-03-18 21:40:36] 2026-03-18 20:39:49,811 | INFO     | corecount: 8
[2026-03-18 21:40:36] 2026-03-18 20:39:49,811 | INFO     | event service: False
[2026-03-18 21:40:36] 2026-03-18 20:39:49,811 | INFO     | sizes: {0: 2280452, 1: 2280909, 2: 2280969, 12: 2280997, 278526: 2438922, 278535: 2447920, 278537: 2448104, 278540: 2448350}
[2026-03-18 21:40:36] 2026-03-18 20:39:49,812 | INFO     | --------------------------------------------------
[2026-03-18 21:40:36] 2026-03-18 20:39:49,812 | INFO     | 
[2026-03-18 21:40:36] 2026-03-18 20:39:49,812 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2026-03-18 21:40:36] 2026-03-18 20:39:50,156 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-18 21:40:36] 2026-03-18 20:39:50,157 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-18 21:40:36] 2026-03-18 20:39:50,157 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-18 21:40:36] 2026-03-18 20:39:50,157 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-18 21:40:36] 2026-03-18 20:39:50,157 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-18 21:40:36] 2026-03-18 20:39:50,157 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-18 21:40:36] 2026-03-18 20:39:50,158 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-18 21:40:36] 2026-03-18 20:39:50,158 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-18 21:40:36] 2026-03-18 20:39:50,158 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-18 21:40:36] 2026-03-18 20:39:50,158 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-18 21:40:36] 2026-03-18 20:39:50,158 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-18 21:40:36] 2026-03-18 20:39:50,158 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-18 21:40:36] 2026-03-18 20:39:50,158 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-18 21:40:36] 2026-03-18 20:39:50,158 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-18 21:40:36] 2026-03-18 20:39:50,159 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-18 21:40:36] 2026-03-18 20:39:50,159 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-18 21:40:36] 2026-03-18 20:39:50,159 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-18 21:40:36] 2026-03-18 20:39:50,159 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-18 21:40:36] 2026-03-18 20:39:50,159 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-18 21:40:36] 2026-03-18 20:39:50,159 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-18 21:40:36] 2026-03-18 20:39:50,159 | INFO     | job 7055834540 has completed (purged errors)
[2026-03-18 21:40:36] 2026-03-18 20:39:50,160 | INFO     | overall cleanup function is called
[2026-03-18 21:40:36] 2026-03-18 20:39:51,177 | INFO     | --- collectZombieJob: --- 10, [28855]
[2026-03-18 21:40:36] 2026-03-18 20:39:51,178 | INFO     | zombie collector waiting for pid 28855
[2026-03-18 21:40:36] 2026-03-18 20:39:51,178 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-18 21:40:36] 2026-03-18 20:39:51,178 | INFO     | collected zombie processes
[2026-03-18 21:40:36] 2026-03-18 20:39:51,178 | INFO     | will attempt to kill all subprocesses of pid=28855
[2026-03-18 21:40:36] 2026-03-18 20:39:51,283 | INFO     | process IDs to be killed: [28855] (in reverse order)
[2026-03-18 21:40:36] 2026-03-18 20:39:52,049 | WARNING  | found no corresponding commands to process id(s)
[2026-03-18 21:40:36] 2026-03-18 20:39:52,049 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-18 21:40:36] 2026-03-18 20:39:52,052 | INFO     | did not find any defunct processes belonging to 28855
[2026-03-18 21:40:36] 2026-03-18 20:39:52,055 | INFO     | did not find any defunct processes belonging to 28855
[2026-03-18 21:40:36] 2026-03-18 20:39:52,056 | INFO     | ready for new job
[2026-03-18 21:40:36] 2026-03-18 20:39:52,056 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-18 21:40:36] 2026-03-18 20:39:52,071 | INFO     | **************************************
[2026-03-18 21:40:36] 2026-03-18 20:39:52,071 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-18 21:40:36] 2026-03-18 20:39:52,071 | INFO     | **************************************
[2026-03-18 21:40:36] 2026-03-18 20:39:52,071 | INFO     | 
[2026-03-18 21:40:36] 2026-03-18 20:39:52,072 | INFO     | pilot is running in a VM
[2026-03-18 21:40:36] 2026-03-18 20:39:52,072 | INFO     | architecture information:
[2026-03-18 21:40:36] 2026-03-18 20:39:52,073 | INFO     | executing command: cat /etc/os-release
[2026-03-18 21:40:36] 2026-03-18 20:39:52,196 | INFO     | cat /etc/os-release:
[2026-03-18 21:40:36] NAME="CentOS Linux"
[2026-03-18 21:40:36] VERSION="7 (Core)"
[2026-03-18 21:40:36] ID="centos"
[2026-03-18 21:40:36] ID_LIKE="rhel fedora"
[2026-03-18 21:40:36] VERSION_ID="7"
[2026-03-18 21:40:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-18 21:40:36] ANSI_COLOR="0;31"
[2026-03-18 21:40:36] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-18 21:40:36] HOME_URL="https://www.centos.org/"
[2026-03-18 21:40:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-18 21:40:36] 
[2026-03-18 21:40:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-18 21:40:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-18 21:40:36] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-18 21:40:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-18 21:40:36] 
[2026-03-18 21:40:36] 2026-03-18 20:39:52,196 | INFO     | **************************************
[2026-03-18 21:40:36] 2026-03-18 20:39:52,701 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2026-03-18 21:40:36] 2026-03-18 20:39:52,964 | INFO     | sufficient remaining disk space (493824770048 B)
[2026-03-18 21:40:36] 2026-03-18 20:39:52,964 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-18 21:40:36] 2026-03-18 20:39:52,965 | INFO     | current server update state: UPDATING_FINAL
[2026-03-18 21:40:36] 2026-03-18 20:39:52,965 | INFO     | update_server=False
[2026-03-18 21:40:36] 2026-03-18 20:39:52,965 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-18 21:40:36] 2026-03-18 20:39:52,965 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-18 21:40:36] 2026-03-18 20:39:52,965 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-18 21:40:36] 2026-03-18 20:39:53,178 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-18 21:40:36] 2026-03-18 20:39:53,179 | INFO     | aborting loop
[2026-03-18 21:40:36] 2026-03-18 20:39:53,527 | INFO     | all data control threads have been joined
[2026-03-18 21:40:36] 2026-03-18 20:39:53,862 | INFO     | all job control threads have been joined
[2026-03-18 21:40:36] 2026-03-18 20:39:53,972 | INFO     | [job] retrieve thread has finished
[2026-03-18 21:40:36] 2026-03-18 20:39:54,047 | INFO     | [job] create_data_payload thread has finished
[2026-03-18 21:40:36] 2026-03-18 20:39:54,107 | INFO     | [data] copytool_in thread has finished
[2026-03-18 21:40:36] 2026-03-18 20:39:54,155 | INFO     | [payload] validate_pre thread has finished
[2026-03-18 21:40:36] 2026-03-18 20:39:54,166 | INFO     | all payload control threads have been joined
[2026-03-18 21:40:36] 2026-03-18 20:39:54,185 | INFO     | [job] job monitor thread has finished
[2026-03-18 21:40:36] 2026-03-18 20:39:54,378 | INFO     | [payload] validate_post thread has finished
[2026-03-18 21:40:36] 2026-03-18 20:39:54,534 | INFO     | [data] control thread has finished
[2026-03-18 21:40:36] 2026-03-18 20:39:54,627 | INFO     | [payload] execute_payloads thread has finished
[2026-03-18 21:40:36] 2026-03-18 20:39:54,822 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-18 21:40:36] 2026-03-18 20:39:54,869 | INFO     | [job] control thread has finished
[2026-03-18 21:40:36] 2026-03-18 20:39:54,973 | INFO     | [data] copytool_out thread has finished
[2026-03-18 21:40:36] 2026-03-18 20:39:55,025 | INFO     | [payload] failed_post thread has finished
[2026-03-18 21:40:36] 2026-03-18 20:39:55,069 | INFO     | [job] validate thread has finished
[2026-03-18 21:40:36] 2026-03-18 20:39:55,169 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-18 21:40:36] 2026-03-18 20:39:55,173 | INFO     | [payload] control thread has finished
[2026-03-18 21:40:36] 2026-03-18 20:39:55,827 | INFO     | [job] queue monitor thread has finished
[2026-03-18 21:40:36] 2026-03-18 20:39:56,974 | INFO     | [data] queue_monitor thread has finished
[2026-03-18 21:40:36] 2026-03-18 20:40:21,534 | INFO     | PID=24367 has CPU usage=16.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-18 21:40:36] 2026-03-18 20:40:21,534 | INFO     | .. there are 9 such processes running
[2026-03-18 21:40:36] 2026-03-18 20:40:21,534 | INFO     | found 0 job(s) in 20 queues
[2026-03-18 21:40:36] 2026-03-18 20:40:21,534 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-18 21:40:36] 2026-03-18 20:40:21,534 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-18 21:40:36] 2026-03-18 20:40:25,924 | INFO     | [monitor] cgroup control has ended
[2026-03-18 21:40:36] 2026-03-18 20:40:26,970 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140360675964736)>', '<ExcThread(monitor, started 140359866775296)>']
[2026-03-18 21:40:36] 2026-03-18 20:40:27,569 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-18 21:40:36] 2026-03-18 20:40:27,570 | INFO     | [monitor] control thread has ended
[2026-03-18 21:40:36] 2026-03-18 20:40:31,996 | INFO     | all workflow threads have been joined
[2026-03-18 21:40:36] 2026-03-18 20:40:31,997 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-18 21:40:36] 2026-03-18 20:40:31,997 | INFO     | traces error code: 0
[2026-03-18 21:40:36] 2026-03-18 20:40:31,997 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-18 21:40:36] 2026-03-18 20:40:32,321 [wrapper] ==== pilot stdout END ====
[2026-03-18 21:40:36] 2026-03-18 20:40:32,410 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-18 21:40:36] 2026-03-18 20:40:32,440 [wrapper] pilotpid: 24367
[2026-03-18 21:40:36] 2026-03-18 20:40:32,497 [wrapper] Pilot exit status: 0
[2026-03-18 21:40:36] 2026-03-18 20:40:32,754 [wrapper] pandaids: 7055834540
[2026-03-18 21:40:36] 2026-03-18 20:40:33,601 [wrapper] cleanup supervisor_pilot 26483 24368
[2026-03-18 21:40:36] 2026-03-18 20:40:33,703 [wrapper] Test setup, not cleaning
[2026-03-18 21:40:36] 2026-03-18 20:40:33,790 [wrapper] apfmon messages muted
[2026-03-18 21:40:36] 2026-03-18 20:40:33,888 [wrapper] ==== wrapper stdout END ====
[2026-03-18 21:40:36] 2026-03-18 20:40:33,975 [wrapper] ==== wrapper stderr END ====
[2026-03-18 21:40:36]  *** Error codes and diagnostics ***
[2026-03-18 21:40:36]     "exeErrorCode": 0,
[2026-03-18 21:40:36]     "exeErrorDiag": "",
[2026-03-18 21:40:36]     "pilotErrorCode": 0,
[2026-03-18 21:40:36]     "pilotErrorDiag": "",
[2026-03-18 21:40:36]  *** Listing of results directory ***
[2026-03-18 21:40:36] total 2286036
[2026-03-18 21:40:36] -rw-r--r--. 1 boinc boinc     585013 Mar 15 13:03 pilot3.tar.gz
[2026-03-18 21:40:36] -rw-r--r--. 1 boinc boinc       5111 Mar 15 13:28 queuedata.json
[2026-03-18 21:40:36] -rwx------. 1 boinc boinc      36322 Mar 15 13:29 runpilot2-wrapper.sh
[2026-03-18 21:40:36] -rw-r--r--. 1 boinc boinc        100 Mar 15 16:11 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-18 21:40:36] -rwxr-xr-x. 1 boinc boinc       7986 Mar 15 16:11 run_atlas
[2026-03-18 21:40:36] -rw-r--r--. 1 boinc boinc        105 Mar 15 16:11 job.xml
[2026-03-18 21:40:36] -rw-r--r--. 1 boinc boinc       6391 Mar 15 16:11 init_data.xml
[2026-03-18 21:40:36] -rw-r--r--. 2 boinc boinc  342285602 Mar 15 16:11 EVNT.49146340._000001.pool.root.1
[2026-03-18 21:40:36] -rw-r--r--. 2 boinc boinc      15845 Mar 15 16:11 start_atlas.sh
[2026-03-18 21:40:36] drwxrwx--x. 2 boinc boinc         68 Mar 15 16:11 shared
[2026-03-18 21:40:36] -rw-r--r--. 2 boinc boinc     597704 Mar 15 16:11 input.tar.gz
[2026-03-18 21:40:36] -rw-r--r--. 1 boinc boinc          0 Mar 15 16:11 boinc_lockfile
[2026-03-18 21:40:36] -rw-r--r--. 1 boinc boinc       2953 Mar 15 16:11 pandaJob.out
[2026-03-18 21:40:36] -rw-------. 1 boinc boinc        415 Mar 15 16:17 workernode_map.json
[2026-03-18 21:40:36] -rw-------. 1 boinc boinc    1006473 Mar 15 16:17 agis_schedconf.cvmfs.json
[2026-03-18 21:40:36] drwx------. 5 boinc boinc       4096 Mar 15 16:17 pilot3
[2026-03-18 21:40:36] -rw-r--r--. 1 boinc boinc        535 Mar 18 21:06 boinc_task_state.xml
[2026-03-18 21:40:36] -rw-------. 1 boinc boinc 1907660210 Mar 18 21:37 HITS.49146346._000002.pool.root.1
[2026-03-18 21:40:36] -rw-------. 1 boinc boinc         95 Mar 18 21:39 pilot_heartbeat.json
[2026-03-18 21:40:36] -rw-------. 1 boinc boinc       1036 Mar 18 21:39 memory_monitor_summary.json
[2026-03-18 21:40:36] -rw-------. 1 boinc boinc    1511579 Mar 18 21:39 agis_ddmendpoints.agis.ALL.json
[2026-03-18 21:40:36] -rw-------. 1 boinc boinc    5162803 Mar 18 21:39 log.49146346._000002.job.log.tgz.1
[2026-03-18 21:40:36] -rw-------. 1 boinc boinc       7022 Mar 18 21:39 heartbeat.json
[2026-03-18 21:40:36] -rw-r--r--. 1 boinc boinc       8192 Mar 18 21:40 boinc_mmap_file
[2026-03-18 21:40:36] -rw-r--r--. 1 boinc boinc         31 Mar 18 21:40 wrapper_checkpoint.txt
[2026-03-18 21:40:36] -rw-------. 1 boinc boinc       4881 Mar 18 21:40 pilotlog.txt
[2026-03-18 21:40:36] -rw-------. 1 boinc boinc   38351558 Mar 18 21:40 log.49146346._000002.job.log.1
[2026-03-18 21:40:36] -rw-------. 1 boinc boinc        353 Mar 18 21:40 output.list
[2026-03-18 21:40:36] -rw-r--r--. 1 boinc boinc        620 Mar 18 21:40 runtime_log
[2026-03-18 21:40:36] -rw-------. 1 boinc boinc   43530240 Mar 18 21:40 result.tar.gz
[2026-03-18 21:40:36] -rw-r--r--. 1 boinc boinc       8817 Mar 18 21:40 runtime_log.err
[2026-03-18 21:40:36] -rw-------. 1 boinc boinc        667 Mar 18 21:40 PAMLDmUmzL9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmK5uLDmr9MzVm.diag
[2026-03-18 21:40:36] -rw-r--r--. 1 boinc boinc      21282 Mar 18 21:40 stderr.txt
[2026-03-18 21:40:36] HITS file was successfully produced:
[2026-03-18 21:40:36] -rw-------. 1 boinc boinc 1907660210 Mar 18 21:37 shared/HITS.pool.root.1
[2026-03-18 21:40:36]  *** Contents of shared directory: ***
[2026-03-18 21:40:36] total 2240328
[2026-03-18 21:40:36] -rw-r--r--. 2 boinc boinc  342285602 Mar 15 16:11 ATLAS.root_0
[2026-03-18 21:40:36] -rw-r--r--. 2 boinc boinc      15845 Mar 15 16:11 start_atlas.sh
[2026-03-18 21:40:36] -rw-r--r--. 2 boinc boinc     597704 Mar 15 16:11 input.tar.gz
[2026-03-18 21:40:36] -rw-------. 1 boinc boinc 1907660210 Mar 18 21:37 HITS.pool.root.1
[2026-03-18 21:40:36] -rw-------. 1 boinc boinc   43530240 Mar 18 21:40 result.tar.gz
21:40:38 (20293): run_atlas exited; CPU time 1071409.479594
21:40:38 (20293): called boinc_finish(0)

</stderr_txt>
]]>

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