Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:55:37 (1222138): wrapper (7.7.26015): starting
00:55:37 (1222138): wrapper: running run_atlas (--nthreads 4)
[2026-03-16 00:55:37] Arguments: --nthreads 4
[2026-03-16 00:55:37] Threads: 4
[2026-03-16 00:55:37] Checking for CVMFS
[2026-03-16 00:55:37] No cvmfs_config command found, will try listing directly
[2026-03-16 00:55:37] CVMFS is ok
[2026-03-16 00:55:37] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-16 00:55:37] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-16 00:55:37] Further information can be found at the LHC@home message board.
[2026-03-16 00:55:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-16 00:55:37] Checking for apptainer binary...
[2026-03-16 00:55:37] which: no apptainer in ((null))
[2026-03-16 00:55:37] apptainer is not installed, using version from CVMFS
[2026-03-16 00:55:37] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-16 00:55:37] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot160/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut29.grid.cesnet.cz
[2026-03-16 00:55:37] apptainer works
[2026-03-16 00:55:37] Set ATHENA_PROC_NUMBER=4
[2026-03-16 00:55:37] Set ATHENA_CORE_NUMBER=4
[2026-03-16 00:55:37] Starting ATLAS job with PandaID=7055818891
[2026-03-16 00:55:37] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot160/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
19:00:59 (2474114): wrapper (7.7.26015): starting
19:00:59 (2474114): wrapper: running run_atlas (--nthreads 4)
[2026-03-16 19:00:59] Arguments: --nthreads 4
[2026-03-16 19:00:59] Threads: 4
[2026-03-16 19:00:59] This job has been restarted, cleaning up previous attempt
[2026-03-16 19:00:59] Checking for CVMFS
[2026-03-16 19:00:59] No cvmfs_config command found, will try listing directly
[2026-03-16 19:00:59] CVMFS is ok
[2026-03-16 19:00:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-16 19:00:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-16 19:00:59] Further information can be found at the LHC@home message board.
[2026-03-16 19:00:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-16 19:00:59] Checking for apptainer binary...
[2026-03-16 19:00:59] which: no apptainer in ((null))
[2026-03-16 19:00:59] apptainer is not installed, using version from CVMFS
[2026-03-16 19:00:59] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-16 19:00:59] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot160/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut29.grid.cesnet.cz
[2026-03-16 19:00:59] apptainer works
[2026-03-16 19:00:59] Set ATHENA_PROC_NUMBER=4
[2026-03-16 19:00:59] Set ATHENA_CORE_NUMBER=4
[2026-03-16 19:00:59] Starting ATLAS job with PandaID=7055818891
[2026-03-16 19:00:59] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot160/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-17 19:58:52]  *** The last 200 lines of the pilot log: ***
[2026-03-17 19:58:52] 2026-03-17 18:57:28,346 | INFO     | job 7055818891 has finished - writing final server update
[2026-03-17 19:58:52] 2026-03-17 18:57:28,346 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_2331094/.job.ad'
[2026-03-17 19:58:52] 2026-03-17 18:57:28,346 | INFO     | total number of processed events: 2050 (read)
[2026-03-17 19:58:52] 2026-03-17 18:57:28,364 | INFO     | using path: /var/lib/boinc/var/slot160/slots/0/PanDA_Pilot-7055818891/memory_monitor_summary.json (trf name=prmon)
[2026-03-17 19:58:52] 2026-03-17 18:57:28,364 | INFO     | extracted standard info from prmon json
[2026-03-17 19:58:52] 2026-03-17 18:57:28,364 | INFO     | extracted standard memory fields from prmon json
[2026-03-17 19:58:52] 2026-03-17 18:57:28,364 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-17 19:58:52] 2026-03-17 18:57:28,378 | INFO     | fitting pss+swap vs Time
[2026-03-17 19:58:52] 2026-03-17 18:57:28,379 | INFO     | sum of square deviations: 989012210608.0
[2026-03-17 19:58:52] 2026-03-17 18:57:28,403 | INFO     | sum of deviations: 1834670857931.5005
[2026-03-17 19:58:52] 2026-03-17 18:57:28,403 | INFO     | mean x: 1773728953.5
[2026-03-17 19:58:52] 2026-03-17 18:57:28,403 | INFO     | mean y: 2375805.1813858696
[2026-03-17 19:58:52] 2026-03-17 18:57:28,403 | INFO     | intersect: -3287986827.3034515
[2026-03-17 19:58:52] 2026-03-17 18:57:28,404 | INFO     | chi2: 3.7299062052231946
[2026-03-17 19:58:52] 2026-03-17 18:57:28,405 | INFO     | sum of square deviations: 978968152518.0
[2026-03-17 19:58:52] 2026-03-17 18:57:28,428 | INFO     | sum of deviations: 2155643559610.0012
[2026-03-17 19:58:52] 2026-03-17 18:57:28,428 | INFO     | mean x: 1773728801.0
[2026-03-17 19:58:52] 2026-03-17 18:57:28,428 | INFO     | mean y: 2380675.619631902
[2026-03-17 19:58:52] 2026-03-17 18:57:28,428 | INFO     | intersect: -3903289857.722991
[2026-03-17 19:58:52] 2026-03-17 18:57:28,429 | INFO     | chi2: 1.6064304989915252
[2026-03-17 19:58:52] 2026-03-17 18:57:28,429 | INFO     | current chi2=1.6064304989915252 (change=56.93107519052486 %)
[2026-03-17 19:58:52] 2026-03-17 18:57:28,430 | INFO     | sum of square deviations: 968992328265.5
[2026-03-17 19:58:52] 2026-03-17 18:57:28,453 | INFO     | sum of deviations: 2155066033356.5
[2026-03-17 19:58:52] 2026-03-17 18:57:28,453 | INFO     | mean x: 1773728648.5
[2026-03-17 19:58:52] 2026-03-17 18:57:28,453 | INFO     | mean y: 2380666.00752394
[2026-03-17 19:58:52] 2026-03-17 18:57:28,453 | INFO     | intersect: -3942441445.862004
[2026-03-17 19:58:52] 2026-03-17 18:57:28,454 | INFO     | chi2: 1.5765204996602278
[2026-03-17 19:58:52] 2026-03-17 18:57:28,454 | INFO     | current chi2=1.5765204996602278 (change=1.861891899467432 %)
[2026-03-17 19:58:52] 2026-03-17 18:57:28,454 | INFO     | right removable region: 1461
[2026-03-17 19:58:52] 2026-03-17 18:57:28,455 | INFO     | sum of square deviations: 978968152518.0
[2026-03-17 19:58:52] 2026-03-17 18:57:28,479 | INFO     | sum of deviations: 1613628807775.0
[2026-03-17 19:58:52] 2026-03-17 18:57:28,479 | INFO     | mean x: 1773729106.0
[2026-03-17 19:58:52] 2026-03-17 18:57:28,479 | INFO     | mean y: 2379156.419222904
[2026-03-17 19:58:52] 2026-03-17 18:57:28,479 | INFO     | intersect: -2921250560.511708
[2026-03-17 19:58:52] 2026-03-17 18:57:28,480 | INFO     | chi2: 2.3107758847005875
[2026-03-17 19:58:52] 2026-03-17 18:57:28,480 | INFO     | current chi2=2.3107758847005875 (change=38.0473460307211 %)
[2026-03-17 19:58:52] 2026-03-17 18:57:28,480 | INFO     | sum of square deviations: 968992328265.5
[2026-03-17 19:58:52] 2026-03-17 18:57:28,504 | INFO     | sum of deviations: 1560566300679.4998
[2026-03-17 19:58:52] 2026-03-17 18:57:28,504 | INFO     | mean x: 1773729258.5
[2026-03-17 19:58:52] 2026-03-17 18:57:28,504 | INFO     | mean y: 2379967.371409029
[2026-03-17 19:58:52] 2026-03-17 18:57:28,504 | INFO     | intersect: -2854218610.967294
[2026-03-17 19:58:52] 2026-03-17 18:57:28,505 | INFO     | chi2: 2.286306387267764
[2026-03-17 19:58:52] 2026-03-17 18:57:28,505 | INFO     | current chi2=2.286306387267764 (change=1.0589299288967715 %)
[2026-03-17 19:58:52] 2026-03-17 18:57:28,505 | INFO     | left removable region: 20
[2026-03-17 19:58:52] 2026-03-17 18:57:28,506 | INFO     | sum of square deviations: 927833731440.0
[2026-03-17 19:58:52] 2026-03-17 18:57:28,529 | INFO     | sum of deviations: 1799569114341.9998
[2026-03-17 19:58:52] 2026-03-17 18:57:28,529 | INFO     | mean x: 1773729228.0
[2026-03-17 19:58:52] 2026-03-17 18:57:28,529 | INFO     | mean y: 2386049.580152672
[2026-03-17 19:58:52] 2026-03-17 18:57:28,529 | INFO     | intersect: -3437829829.3581657
[2026-03-17 19:58:52] 2026-03-17 18:57:28,530 | INFO     | chi2: 0.1123707278563751
[2026-03-17 19:58:52] 2026-03-17 18:57:28,530 | INFO     | current memory leak: 1.94 B/s (using 1441 data points, chi2=0.11)
[2026-03-17 19:58:52] 2026-03-17 18:57:28,531 | INFO     | could have reported an average CPU frequency of 3628 MHz (53 samples)
[2026-03-17 19:58:52] 2026-03-17 18:57:28,531 | INFO     | ..............................
[2026-03-17 19:58:52] 2026-03-17 18:57:28,531 | INFO     | . Timing measurements:
[2026-03-17 19:58:52] 2026-03-17 18:57:28,531 | INFO     | . get job = 0 s
[2026-03-17 19:58:52] 2026-03-17 18:57:28,531 | INFO     | . initial setup = 1 s
[2026-03-17 19:58:52] 2026-03-17 18:57:28,531 | INFO     | . payload setup = 4 s
[2026-03-17 19:58:52] 2026-03-17 18:57:28,531 | INFO     | . stage-in = 0 s
[2026-03-17 19:58:52] 2026-03-17 18:57:28,531 | INFO     | . payload execution = 89756 s
[2026-03-17 19:58:52] 2026-03-17 18:57:28,531 | INFO     | . stage-out = 2 s
[2026-03-17 19:58:52] 2026-03-17 18:57:28,531 | INFO     | . log creation = 0 s
[2026-03-17 19:58:52] 2026-03-17 18:57:28,531 | INFO     | ..............................
[2026-03-17 19:58:52] 2026-03-17 18:57:28,580 | INFO     | 
[2026-03-17 19:58:52] 2026-03-17 18:57:28,580 | INFO     | job summary report
[2026-03-17 19:58:52] 2026-03-17 18:57:28,580 | INFO     | --------------------------------------------------
[2026-03-17 19:58:52] 2026-03-17 18:57:28,580 | INFO     | PanDA job id: 7055818891
[2026-03-17 19:58:52] 2026-03-17 18:57:28,580 | INFO     | task id: 49145769
[2026-03-17 19:58:52] 2026-03-17 18:57:28,580 | INFO     | errors: (none)
[2026-03-17 19:58:52] 2026-03-17 18:57:28,580 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-17 19:58:52] 2026-03-17 18:57:28,580 | INFO     | pilot state: finished 
[2026-03-17 19:58:52] 2026-03-17 18:57:28,580 | INFO     | transexitcode: 0
[2026-03-17 19:58:52] 2026-03-17 18:57:28,580 | INFO     | exeerrorcode: 0
[2026-03-17 19:58:52] 2026-03-17 18:57:28,580 | INFO     | exeerrordiag: 
[2026-03-17 19:58:52] 2026-03-17 18:57:28,580 | INFO     | exitcode: 0
[2026-03-17 19:58:52] 2026-03-17 18:57:28,580 | INFO     | exitmsg: OK
[2026-03-17 19:58:52] 2026-03-17 18:57:28,580 | INFO     | cpuconsumptiontime: 352800 s
[2026-03-17 19:58:52] 2026-03-17 18:57:28,580 | INFO     | nevents: 2050
[2026-03-17 19:58:52] 2026-03-17 18:57:28,580 | INFO     | neventsw: 0
[2026-03-17 19:58:52] 2026-03-17 18:57:28,580 | INFO     | pid: 2503208
[2026-03-17 19:58:52] 2026-03-17 18:57:28,580 | INFO     | pgrp: 2503208
[2026-03-17 19:58:52] 2026-03-17 18:57:28,580 | INFO     | corecount: 4
[2026-03-17 19:58:52] 2026-03-17 18:57:28,580 | INFO     | event service: False
[2026-03-17 19:58:52] 2026-03-17 18:57:28,581 | INFO     | sizes: {0: 2279819, 1: 2280949, 11: 2280949, 89765: 2348722, 89769: 2357744, 89770: 2358270}
[2026-03-17 19:58:52] 2026-03-17 18:57:28,581 | INFO     | --------------------------------------------------
[2026-03-17 19:58:52] 2026-03-17 18:57:28,581 | INFO     | 
[2026-03-17 19:58:52] 2026-03-17 18:57:28,581 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot160/slots/0
[2026-03-17 19:58:52] 2026-03-17 18:57:28,608 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-17 19:58:52] 2026-03-17 18:57:28,608 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-17 19:58:52] 2026-03-17 18:57:28,608 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-17 19:58:52] 2026-03-17 18:57:28,608 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-17 19:58:52] 2026-03-17 18:57:28,608 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-17 19:58:52] 2026-03-17 18:57:28,608 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-17 19:58:52] 2026-03-17 18:57:28,608 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-17 19:58:52] 2026-03-17 18:57:28,608 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-17 19:58:52] 2026-03-17 18:57:28,609 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-17 19:58:52] 2026-03-17 18:57:28,609 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-17 19:58:52] 2026-03-17 18:57:28,609 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-17 19:58:52] 2026-03-17 18:57:28,609 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-17 19:58:52] 2026-03-17 18:57:28,609 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-17 19:58:52] 2026-03-17 18:57:28,609 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-17 19:58:52] 2026-03-17 18:57:28,609 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-17 19:58:52] 2026-03-17 18:57:28,609 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-17 19:58:52] 2026-03-17 18:57:28,609 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-17 19:58:52] 2026-03-17 18:57:28,609 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-17 19:58:52] 2026-03-17 18:57:28,609 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-17 19:58:52] 2026-03-17 18:57:28,609 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-17 19:58:52] 2026-03-17 18:57:28,609 | INFO     | job 7055818891 has completed (purged errors)
[2026-03-17 19:58:52] 2026-03-17 18:57:28,609 | INFO     | overall cleanup function is called
[2026-03-17 19:58:52] 2026-03-17 18:57:29,337 | INFO     | PID=2481895 has CPU usage=24.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-03-17 19:58:52] 2026-03-17 18:57:29,337 | INFO     | .. there are 36 such processes running
[2026-03-17 19:58:52] 2026-03-17 18:57:29,619 | INFO     | --- collectZombieJob: --- 10, [2503208]
[2026-03-17 19:58:52] 2026-03-17 18:57:29,619 | INFO     | zombie collector waiting for pid 2503208
[2026-03-17 19:58:52] 2026-03-17 18:57:29,619 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-17 19:58:52] 2026-03-17 18:57:29,619 | INFO     | collected zombie processes
[2026-03-17 19:58:52] 2026-03-17 18:57:29,619 | INFO     | will attempt to kill all subprocesses of pid=2503208
[2026-03-17 19:58:52] 2026-03-17 18:57:30,115 | INFO     | process IDs to be killed: [2503208] (in reverse order)
[2026-03-17 19:58:52] 2026-03-17 18:57:30,354 | WARNING  | found no corresponding commands to process id(s)
[2026-03-17 19:58:52] 2026-03-17 18:57:30,354 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-17 19:58:52] 2026-03-17 18:57:30,388 | INFO     | did not find any defunct processes belonging to 2503208
[2026-03-17 19:58:52] 2026-03-17 18:57:30,421 | INFO     | did not find any defunct processes belonging to 2503208
[2026-03-17 19:58:52] 2026-03-17 18:57:30,421 | INFO     | ready for new job
[2026-03-17 19:58:52] 2026-03-17 18:57:30,421 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-17 19:58:52] 2026-03-17 18:57:30,427 | INFO     | **************************************
[2026-03-17 19:58:52] 2026-03-17 18:57:30,427 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-17 19:58:52] 2026-03-17 18:57:30,427 | INFO     | **************************************
[2026-03-17 19:58:52] 2026-03-17 18:57:30,427 | INFO     | 
[2026-03-17 19:58:52] 2026-03-17 18:57:30,434 | INFO     | architecture information:
[2026-03-17 19:58:52] 2026-03-17 18:57:30,435 | INFO     | executing command: cat /etc/os-release
[2026-03-17 19:58:52] 2026-03-17 18:57:30,449 | INFO     | cat /etc/os-release:
[2026-03-17 19:58:52] NAME="CentOS Linux"
[2026-03-17 19:58:52] VERSION="7 (Core)"
[2026-03-17 19:58:52] ID="centos"
[2026-03-17 19:58:52] ID_LIKE="rhel fedora"
[2026-03-17 19:58:52] VERSION_ID="7"
[2026-03-17 19:58:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-17 19:58:52] ANSI_COLOR="0;31"
[2026-03-17 19:58:52] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-17 19:58:52] HOME_URL="https://www.centos.org/"
[2026-03-17 19:58:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-17 19:58:52] 
[2026-03-17 19:58:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-17 19:58:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-17 19:58:52] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-17 19:58:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-17 19:58:52] 
[2026-03-17 19:58:52] 2026-03-17 18:57:30,450 | INFO     | **************************************
[2026-03-17 19:58:52] 2026-03-17 18:57:30,952 | INFO     | executing command: df -mP /var/lib/boinc/var/slot160/slots/0
[2026-03-17 19:58:52] 2026-03-17 18:57:30,968 | INFO     | sufficient remaining disk space (30490492928 B)
[2026-03-17 19:58:52] 2026-03-17 18:57:30,968 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-17 19:58:52] 2026-03-17 18:57:30,969 | INFO     | current server update state: UPDATING_FINAL
[2026-03-17 19:58:52] 2026-03-17 18:57:30,969 | INFO     | update_server=False
[2026-03-17 19:58:52] 2026-03-17 18:57:30,969 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-17 19:58:52] 2026-03-17 18:57:30,969 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-17 19:58:52] 2026-03-17 18:57:31,264 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-17 19:58:52] 2026-03-17 18:57:31,264 | INFO     | aborting loop
[2026-03-17 19:58:52] 2026-03-17 18:57:31,717 | INFO     | all data control threads have been joined
[2026-03-17 19:58:52] 2026-03-17 18:57:31,848 | INFO     | all payload control threads have been joined
[2026-03-17 19:58:52] 2026-03-17 18:57:31,951 | INFO     | all job control threads have been joined
[2026-03-17 19:58:52] 2026-03-17 18:57:31,975 | INFO     | [job] retrieve thread has finished
[2026-03-17 19:58:52] 2026-03-17 18:57:32,168 | INFO     | [job] create_data_payload thread has finished
[2026-03-17 19:58:52] 2026-03-17 18:57:32,269 | INFO     | [job] job monitor thread has finished
[2026-03-17 19:58:52] 2026-03-17 18:57:32,349 | INFO     | [payload] validate_post thread has finished
[2026-03-17 19:58:52] 2026-03-17 18:57:32,447 | INFO     | [payload] failed_post thread has finished
[2026-03-17 19:58:52] 2026-03-17 18:57:32,643 | INFO     | [data] copytool_in thread has finished
[2026-03-17 19:58:52] 2026-03-17 18:57:32,722 | INFO     | [data] control thread has finished
[2026-03-17 19:58:52] 2026-03-17 18:57:32,734 | INFO     | [payload] validate_pre thread has finished
[2026-03-17 19:58:52] 2026-03-17 18:57:32,853 | INFO     | [payload] control thread has finished
[2026-03-17 19:58:52] 2026-03-17 18:57:32,956 | INFO     | [job] control thread has finished
[2026-03-17 19:58:52] 2026-03-17 18:57:32,974 | INFO     | [data] copytool_out thread has finished
[2026-03-17 19:58:52] 2026-03-17 18:57:33,277 | INFO     | [job] validate thread has finished
[2026-03-17 19:58:52] 2026-03-17 18:57:33,298 | INFO     | [payload] execute_payloads thread has finished
[2026-03-17 19:58:52] 2026-03-17 18:57:33,588 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-17 19:58:52] 2026-03-17 18:57:34,350 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-17 19:58:52] 2026-03-17 18:57:34,593 | INFO     | [job] queue monitor thread has finished
[2026-03-17 19:58:52] 2026-03-17 18:57:37,979 | INFO     | [monitor] cgroup control has ended
[2026-03-17 19:58:52] 2026-03-17 18:57:38,355 | INFO     | [data] queue_monitor thread has finished
[2026-03-17 19:58:52] 2026-03-17 18:57:41,435 | INFO     | job.realtimelogging is not enabled
[2026-03-17 19:58:52] 2026-03-17 18:57:42,440 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-17 19:58:52] 2026-03-17 18:57:42,699 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22696479274816)>', '<ExcThread(monitor, started 22696237995776)>']
[2026-03-17 19:58:52] 2026-03-17 18:57:47,724 | INFO     | all workflow threads have been joined
[2026-03-17 19:58:52] 2026-03-17 18:57:47,724 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-17 19:58:52] 2026-03-17 18:57:47,724 | INFO     | traces error code: 0
[2026-03-17 19:58:52] 2026-03-17 18:57:47,725 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-17 19:58:52] 2026-03-17 18:58:01,993 | INFO     | PID=2481895 has CPU usage=4.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-17 19:58:52] 2026-03-17 18:58:01,994 | INFO     | .. there are 36 such processes running
[2026-03-17 19:58:52] 2026-03-17 18:58:01,994 | INFO     | found 0 job(s) in 20 queues
[2026-03-17 19:58:52] 2026-03-17 18:58:01,994 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-17 19:58:52] 2026-03-17 18:58:01,994 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-17 19:58:52] 2026-03-17 18:58:01,994 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-17 19:58:52] 2026-03-17 18:58:01,994 | INFO     | [monitor] control thread has ended
[2026-03-17 19:58:52] 2026-03-17 18:58:02,242 [wrapper] ==== pilot stdout END ====
[2026-03-17 19:58:52] 2026-03-17 18:58:02,245 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-17 19:58:52] 2026-03-17 18:58:02,247 [wrapper] pilotpid: 2481895
[2026-03-17 19:58:52] 2026-03-17 18:58:02,249 [wrapper] Pilot exit status: 0
[2026-03-17 19:58:52] 2026-03-17 18:58:02,257 [wrapper] pandaids: 7055818891 7055818891
[2026-03-17 19:58:52] 2026-03-17 18:58:02,408 [wrapper] cleanup supervisor_pilot  458263 2481896
[2026-03-17 19:58:52] 2026-03-17 18:58:02,410 [wrapper] Test setup, not cleaning
[2026-03-17 19:58:52] 2026-03-17 18:58:02,413 [wrapper] apfmon messages muted
[2026-03-17 19:58:52] 2026-03-17 18:58:02,415 [wrapper] ==== wrapper stdout END ====
[2026-03-17 19:58:52] 2026-03-17 18:58:02,417 [wrapper] ==== wrapper stderr END ====
[2026-03-17 19:58:52]  *** Error codes and diagnostics ***
[2026-03-17 19:58:52]     "exeErrorCode": 0,
[2026-03-17 19:58:52]     "exeErrorDiag": "",
[2026-03-17 19:58:52]     "pilotErrorCode": 0,
[2026-03-17 19:58:52]     "pilotErrorDiag": "",
[2026-03-17 19:58:52]  *** Listing of results directory ***
[2026-03-17 19:58:52] total 2466740
[2026-03-17 19:58:52] drwx------. 5 boinc boinc       4096 Mar 10 17:00 pilot3
[2026-03-17 19:58:52] -rw-r--r--. 1 boinc boinc     585013 Mar 15 12:37 pilot3.tar.gz
[2026-03-17 19:58:52] -rw-r--r--. 1 boinc boinc       5111 Mar 15 12:57 queuedata.json
[2026-03-17 19:58:52] -rwx------. 1 boinc boinc      36322 Mar 15 12:58 runpilot2-wrapper.sh
[2026-03-17 19:58:52] -rw-r--r--. 1 boinc boinc        100 Mar 16 00:55 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-17 19:58:52] -rwxr-xr-x. 1 boinc boinc       7986 Mar 16 00:55 run_atlas
[2026-03-17 19:58:52] -rw-r--r--. 1 boinc boinc        105 Mar 16 00:55 job.xml
[2026-03-17 19:58:52] -rw-r--r--. 3 boinc boinc  337619682 Mar 16 00:55 EVNT.49145761._000001.pool.root.1
[2026-03-17 19:58:52] -rw-r--r--. 3 boinc boinc  337619682 Mar 16 00:55 ATLAS.root_0
[2026-03-17 19:58:52] -rw-r--r--. 2 boinc boinc     597705 Mar 16 00:55 input.tar.gz
[2026-03-17 19:58:52] -rw-r--r--. 2 boinc boinc      15845 Mar 16 00:55 start_atlas.sh
[2026-03-17 19:58:52] drwxrwx--x. 2 boinc boinc       4096 Mar 16 00:55 shared
[2026-03-17 19:58:52] -rw-r--r--. 1 boinc boinc          0 Mar 16 00:55 boinc_lockfile
[2026-03-17 19:58:52] -rw-r--r--. 1 boinc boinc       2933 Mar 16 19:00 pandaJob.out
[2026-03-17 19:58:52] -rw-------. 1 boinc boinc    1006429 Mar 16 19:01 agis_schedconf.cvmfs.json
[2026-03-17 19:58:52] -rw-------. 1 boinc boinc        443 Mar 16 19:01 workernode_map.json
[2026-03-17 19:58:52] -rw-r--r--. 1 boinc boinc       6718 Mar 16 22:49 init_data.xml
[2026-03-17 19:58:52] -rw-r--r--. 1 boinc boinc        532 Mar 17 19:51 boinc_task_state.xml
[2026-03-17 19:58:52] -rw-------. 1 boinc boinc 1817413510 Mar 17 19:56 HITS.49145769._000001.pool.root.1
[2026-03-17 19:58:52] -rw-------. 1 boinc boinc       1057 Mar 17 19:57 memory_monitor_summary.json
[2026-03-17 19:58:52] -rw-------. 1 boinc boinc         96 Mar 17 19:57 pilot_heartbeat.json
[2026-03-17 19:58:52] -rw-------. 1 boinc boinc    1511579 Mar 17 19:57 agis_ddmendpoints.agis.ALL.json
[2026-03-17 19:58:52] -rw-------. 1 boinc boinc    2232115 Mar 17 19:57 log.49145769._000001.job.log.tgz.1
[2026-03-17 19:58:52] -rw-------. 1 boinc boinc       7031 Mar 17 19:57 heartbeat.json
[2026-03-17 19:58:52] -rw-------. 1 boinc boinc        823 Mar 17 19:58 pilotlog.txt
[2026-03-17 19:58:52] -rw-------. 1 boinc boinc   12441093 Mar 17 19:58 log.49145769._000001.job.log.1
[2026-03-17 19:58:52] -rw-------. 1 boinc boinc        353 Mar 17 19:58 output.list
[2026-03-17 19:58:52] -rw-r--r--. 1 boinc boinc        620 Mar 17 19:58 runtime_log
[2026-03-17 19:58:52] -rw-------. 1 boinc boinc   14694400 Mar 17 19:58 result.tar.gz
[2026-03-17 19:58:52] -rw-r--r--. 1 boinc boinc       9299 Mar 17 19:58 runtime_log.err
[2026-03-17 19:58:52] -rw-------. 1 boinc boinc        801 Mar 17 19:58 WQNKDmbIzL9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmT2uLDmY6JVon.diag
[2026-03-17 19:58:52] -rw-r--r--. 1 boinc boinc         29 Mar 17 19:58 wrapper_checkpoint.txt
[2026-03-17 19:58:52] -rw-r--r--. 1 boinc boinc       8192 Mar 17 19:58 boinc_mmap_file
[2026-03-17 19:58:52] -rw-r--r--. 1 boinc boinc      22936 Mar 17 19:58 stderr.txt
[2026-03-17 19:58:52] HITS file was successfully produced:
[2026-03-17 19:58:52] -rw-------. 1 boinc boinc 1817413510 Mar 17 19:56 shared/HITS.pool.root.1
[2026-03-17 19:58:52]  *** Contents of shared directory: ***
[2026-03-17 19:58:52] total 2119488
[2026-03-17 19:58:52] -rw-r--r--. 3 boinc boinc  337619682 Mar 16 00:55 ATLAS.root_0
[2026-03-17 19:58:52] -rw-r--r--. 2 boinc boinc     597705 Mar 16 00:55 input.tar.gz
[2026-03-17 19:58:52] -rw-r--r--. 2 boinc boinc      15845 Mar 16 00:55 start_atlas.sh
[2026-03-17 19:58:52] -rw-------. 1 boinc boinc 1817413510 Mar 17 19:56 HITS.pool.root.1
[2026-03-17 19:58:52] -rw-------. 1 boinc boinc   14694400 Mar 17 19:58 result.tar.gz
19:58:53 (2474114): run_atlas exited; CPU time 356334.640359
19:58:53 (2474114): called boinc_finish(0)

</stderr_txt>
]]>

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