Stderr output

<core_client_version>8.3.0</core_client_version>
<![CDATA[
<stderr_txt>
06:45:15 (2170901): wrapper (7.7.26015): starting
06:45:15 (2170901): wrapper: running run_atlas (--nthreads 4)
[2026-03-15 06:45:15] Arguments: --nthreads 4
[2026-03-15 06:45:15] Threads: 4
[2026-03-15 06:45:15] Checking for CVMFS
[2026-03-15 06:45:15] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-15 06:45:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-15 06:45:15] Running cvmfs_config stat atlas.cern.ch
[2026-03-15 06:45:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-15 06:45:15] 2.13.3.0 2016825 382 48468 157310 2 188 3072103 4096000 972 130560 0 407892 99.991 10996 944 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 0
[2026-03-15 06:45:15] CVMFS is ok
[2026-03-15 06:45:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-15 06:45:15] Small home clusters do not require a local http proxy but it is suggested if
[2026-03-15 06:45:15] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-03-15 06:45:15] Further information can be found at the LHC@home message board.
[2026-03-15 06:45:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-15 06:45:15] Checking for apptainer binary...
[2026-03-15 06:45:15] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-15 06:45:15] Running /usr/bin/apptainer --version
[2026-03-15 06:45:15] apptainer version 1.4.5
[2026-03-15 06:45:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-15 06:45:15] Taichi-Ubuntu
[2026-03-15 06:45:15] apptainer works
[2026-03-15 06:45:15] Set ATHENA_PROC_NUMBER=4
[2026-03-15 06:45:15] Set ATHENA_CORE_NUMBER=4
[2026-03-15 06:45:15] Starting ATLAS job with PandaID=7055793625
[2026-03-15 06:45:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/whitlerd/Desktop/BOINC/slots/12 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-15 08:20:44]  *** The last 200 lines of the pilot log: ***
[2026-03-15 08:20:44]  lfn=log.48955006._052663.job.log.tgz.1
[2026-03-15 08:20:44]  mtime=0
[2026-03-15 08:20:44]  protocol_id=None
[2026-03-15 08:20:44]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-15 08:20:44]  replicas=None
[2026-03-15 08:20:44]  scope=mc23_13p6TeV
[2026-03-15 08:20:44]  status=None
[2026-03-15 08:20:44]  status_code=0
[2026-03-15 08:20:44]  storage_token=
[2026-03-15 08:20:44]  surl=/home/whitlerd/Desktop/BOINC/slots/12/PanDA_Pilot-7055793625/log.48955006._052663.job.log.tgz.1
[2026-03-15 08:20:44]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/72/84/log.48955006._052663.job.log.tgz.1
[2026-03-15 08:20:44]  workdir=None
[2026-03-15 08:20:44] ]
[2026-03-15 08:20:44] 2026-03-15 12:19:54,593 | INFO     | transferring file log.48955006._052663.job.log.tgz.1 from /home/whitlerd/Desktop/BOINC/slots/12/PanDA_Pilot-7055793625/log.48955006._052663.job.log.tgz.1 to /home/
[2026-03-15 08:20:44] 2026-03-15 12:19:54,593 | INFO     | executing command: /usr/bin/env mv /home/whitlerd/Desktop/BOINC/slots/12/PanDA_Pilot-7055793625/log.48955006._052663.job.log.tgz.1 /home/whitlerd/Desktop/BOINC/slo
[2026-03-15 08:20:44] 2026-03-15 12:19:54,612 | INFO     | adding to output.list: log.48955006._052663.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/72/84/log.48955006._052663.job.log.tg
[2026-03-15 08:20:44] 2026-03-15 12:19:54,612 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-15 08:20:44] 2026-03-15 12:19:54,612 | INFO     | summary of transferred files:
[2026-03-15 08:20:44] 2026-03-15 12:19:54,612 | INFO     |  -- lfn=log.48955006._052663.job.log.tgz.1, status_code=0, status=transferred
[2026-03-15 08:20:44] 2026-03-15 12:19:54,612 | INFO     | stage-out finished correctly
[2026-03-15 08:20:44] 2026-03-15 12:19:55,700 | WARNING  | process 2196989 can no longer be monitored (due to stat problems) - aborting
[2026-03-15 08:20:44] 2026-03-15 12:19:55,700 | INFO     | using path: /home/whitlerd/Desktop/BOINC/slots/12/PanDA_Pilot-7055793625/memory_monitor_summary.json (trf name=prmon)
[2026-03-15 08:20:44] 2026-03-15 12:19:55,857 | INFO     | time since job start (5666s) is within the limit (345600.0s)
[2026-03-15 08:20:44] 2026-03-15 12:19:55,888 | INFO     | number of running child processes to parent process 2196989: 1
[2026-03-15 08:20:44] 2026-03-15 12:19:55,888 | INFO     | maximum number of monitored processes: 6
[2026-03-15 08:20:44] 2026-03-15 12:19:56,420 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-15 08:20:44] 2026-03-15 12:19:57,861 | INFO     | time since job start (5668s) is within the limit (345600.0s)
[2026-03-15 08:20:44] 2026-03-15 12:19:58,391 | INFO     | monitor loop #425: job 0:7055793625 is in state 'finished'
[2026-03-15 08:20:44] 2026-03-15 12:19:58,392 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-15 08:20:44] 2026-03-15 12:19:59,061 | INFO     | PID=2180092 has CPU usage=8.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-15 08:20:44] 2026-03-15 12:19:59,061 | INFO     | .. there are 4 such processes running
[2026-03-15 08:20:44] 2026-03-15 12:19:59,161 | INFO     | job 7055793625 has state=finished
[2026-03-15 08:20:44] 2026-03-15 12:19:59,162 | INFO     | preparing for final server update for job 7055793625 in state='finished'
[2026-03-15 08:20:44] 2026-03-15 12:19:59,162 | INFO     | reading metadata from: /home/whitlerd/Desktop/BOINC/slots/12/PanDA_Pilot-7055793625/jobReport.json
[2026-03-15 08:20:44] 2026-03-15 12:19:59,164 | INFO     | added worker_node to metadata from /home/whitlerd/Desktop/BOINC/slots/12/workernode_map.json
[2026-03-15 08:20:44] 2026-03-15 12:19:59,164 | INFO     | this job has now completed (state=finished)
[2026-03-15 08:20:44] 2026-03-15 12:19:59,164 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-15 08:20:44] 2026-03-15 12:19:59,164 | INFO     | log transfer has been attempted: DONE
[2026-03-15 08:20:44] 2026-03-15 12:19:59,164 | INFO     | job 7055793625 has finished - writing final server update
[2026-03-15 08:20:44] 2026-03-15 12:19:59,165 | INFO     | total number of processed events: 400 (read)
[2026-03-15 08:20:44] 2026-03-15 12:19:59,173 | INFO     | using path: /home/whitlerd/Desktop/BOINC/slots/12/PanDA_Pilot-7055793625/memory_monitor_summary.json (trf name=prmon)
[2026-03-15 08:20:44] 2026-03-15 12:19:59,174 | INFO     | extracted standard info from prmon json
[2026-03-15 08:20:44] 2026-03-15 12:19:59,174 | INFO     | extracted standard memory fields from prmon json
[2026-03-15 08:20:44] 2026-03-15 12:19:59,174 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-15 08:20:44] 2026-03-15 12:19:59,174 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-15 08:20:44] 2026-03-15 12:19:59,174 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-15 08:20:44] 2026-03-15 12:19:59,176 | INFO     | fitting pss+swap vs Time
[2026-03-15 08:20:44] 2026-03-15 12:19:59,176 | INFO     | sum of square deviations: 197203697.5
[2026-03-15 08:20:44] 2026-03-15 12:19:59,177 | INFO     | sum of deviations: -3712502517.0
[2026-03-15 08:20:44] 2026-03-15 12:19:59,177 | INFO     | mean x: 1773574447.5
[2026-03-15 08:20:44] 2026-03-15 12:19:59,177 | INFO     | mean y: 2345451.6279069767
[2026-03-15 08:20:44] 2026-03-15 12:19:59,177 | INFO     | intersect: 33391169717.6163
[2026-03-15 08:20:44] 2026-03-15 12:19:59,177 | INFO     | chi2: 0.010998080613660309
[2026-03-15 08:20:44] 2026-03-15 12:19:59,178 | INFO     | current memory leak: -18.83 B/s (using 86 data points, chi2=0.01)
[2026-03-15 08:20:44] 2026-03-15 12:19:59,178 | INFO     | could have reported an average CPU frequency of 3472 MHz (7 samples)
[2026-03-15 08:20:44] 2026-03-15 12:19:59,178 | INFO     | ..............................
[2026-03-15 08:20:44] 2026-03-15 12:19:59,178 | INFO     | . Timing measurements:
[2026-03-15 08:20:44] 2026-03-15 12:19:59,178 | INFO     | . get job = 0 s
[2026-03-15 08:20:44] 2026-03-15 12:19:59,178 | INFO     | . initial setup = 6 s
[2026-03-15 08:20:44] 2026-03-15 12:19:59,178 | INFO     | . payload setup = 5 s
[2026-03-15 08:20:44] 2026-03-15 12:19:59,178 | INFO     | . stage-in = 0 s
[2026-03-15 08:20:44] 2026-03-15 12:19:59,178 | INFO     | . payload execution = 5644 s
[2026-03-15 08:20:44] 2026-03-15 12:19:59,178 | INFO     | . stage-out = 0 s
[2026-03-15 08:20:44] 2026-03-15 12:19:59,178 | INFO     | . log creation = 0 s
[2026-03-15 08:20:44] 2026-03-15 12:19:59,179 | INFO     | ..............................
[2026-03-15 08:20:44] 2026-03-15 12:19:59,239 | INFO     | 
[2026-03-15 08:20:44] 2026-03-15 12:19:59,239 | INFO     | job summary report
[2026-03-15 08:20:44] 2026-03-15 12:19:59,239 | INFO     | --------------------------------------------------
[2026-03-15 08:20:44] 2026-03-15 12:19:59,239 | INFO     | PanDA job id: 7055793625
[2026-03-15 08:20:44] 2026-03-15 12:19:59,239 | INFO     | task id: 48955006
[2026-03-15 08:20:44] 2026-03-15 12:19:59,239 | INFO     | errors: (none)
[2026-03-15 08:20:44] 2026-03-15 12:19:59,240 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-15 08:20:44] 2026-03-15 12:19:59,240 | INFO     | pilot state: finished 
[2026-03-15 08:20:44] 2026-03-15 12:19:59,240 | INFO     | transexitcode: 0
[2026-03-15 08:20:44] 2026-03-15 12:19:59,240 | INFO     | exeerrorcode: 0
[2026-03-15 08:20:44] 2026-03-15 12:19:59,240 | INFO     | exeerrordiag: 
[2026-03-15 08:20:44] 2026-03-15 12:19:59,240 | INFO     | exitcode: 0
[2026-03-15 08:20:44] 2026-03-15 12:19:59,240 | INFO     | exitmsg: OK
[2026-03-15 08:20:44] 2026-03-15 12:19:59,240 | INFO     | cpuconsumptiontime: 21940 s
[2026-03-15 08:20:44] 2026-03-15 12:19:59,240 | INFO     | nevents: 400
[2026-03-15 08:20:44] 2026-03-15 12:19:59,240 | INFO     | neventsw: 0
[2026-03-15 08:20:44] 2026-03-15 12:19:59,240 | INFO     | pid: 2196989
[2026-03-15 08:20:44] 2026-03-15 12:19:59,240 | INFO     | pgrp: 2196989
[2026-03-15 08:20:44] 2026-03-15 12:19:59,240 | INFO     | corecount: 4
[2026-03-15 08:20:44] 2026-03-15 12:19:59,240 | INFO     | event service: False
[2026-03-15 08:20:44] 2026-03-15 12:19:59,240 | INFO     | sizes: {0: 2279702, 1: 2280219, 11: 2280219, 5653: 2306938, 5654: 2315966, 5656: 2316022, 5659: 2316344}
[2026-03-15 08:20:44] 2026-03-15 12:19:59,240 | INFO     | --------------------------------------------------
[2026-03-15 08:20:44] 2026-03-15 12:19:59,240 | INFO     | 
[2026-03-15 08:20:44] 2026-03-15 12:19:59,241 | INFO     | executing command: ls -lF /home/whitlerd/Desktop/BOINC/slots/12
[2026-03-15 08:20:44] 2026-03-15 12:19:59,264 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-15 08:20:44] 2026-03-15 12:19:59,265 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-15 08:20:44] 2026-03-15 12:19:59,265 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-15 08:20:44] 2026-03-15 12:19:59,265 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-15 08:20:44] 2026-03-15 12:19:59,265 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-15 08:20:44] 2026-03-15 12:19:59,265 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-15 08:20:44] 2026-03-15 12:19:59,265 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-15 08:20:44] 2026-03-15 12:19:59,265 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-15 08:20:44] 2026-03-15 12:19:59,265 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-15 08:20:44] 2026-03-15 12:19:59,265 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-15 08:20:44] 2026-03-15 12:19:59,265 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-15 08:20:44] 2026-03-15 12:19:59,266 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-15 08:20:44] 2026-03-15 12:19:59,266 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-15 08:20:44] 2026-03-15 12:19:59,266 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-15 08:20:44] 2026-03-15 12:19:59,266 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-15 08:20:44] 2026-03-15 12:19:59,266 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-15 08:20:44] 2026-03-15 12:19:59,266 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-15 08:20:44] 2026-03-15 12:19:59,266 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-15 08:20:44] 2026-03-15 12:19:59,266 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-15 08:20:44] 2026-03-15 12:19:59,266 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-15 08:20:44] 2026-03-15 12:19:59,266 | INFO     | job 7055793625 has completed (purged errors)
[2026-03-15 08:20:44] 2026-03-15 12:19:59,267 | INFO     | overall cleanup function is called
[2026-03-15 08:20:44] 2026-03-15 12:20:00,275 | INFO     | --- collectZombieJob: --- 10, [2196989]
[2026-03-15 08:20:44] 2026-03-15 12:20:00,276 | INFO     | zombie collector waiting for pid 2196989
[2026-03-15 08:20:44] 2026-03-15 12:20:00,276 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-15 08:20:44] 2026-03-15 12:20:00,276 | INFO     | collected zombie processes
[2026-03-15 08:20:44] 2026-03-15 12:20:00,276 | INFO     | will attempt to kill all subprocesses of pid=2196989
[2026-03-15 08:20:44] 2026-03-15 12:20:00,470 | INFO     | process IDs to be killed: [2196989] (in reverse order)
[2026-03-15 08:20:44] 2026-03-15 12:20:00,532 | WARNING  | found no corresponding commands to process id(s)
[2026-03-15 08:20:44] 2026-03-15 12:20:00,532 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-15 08:20:44] 2026-03-15 12:20:00,538 | INFO     | did not find any defunct processes belonging to 2196989
[2026-03-15 08:20:44] 2026-03-15 12:20:00,544 | INFO     | did not find any defunct processes belonging to 2196989
[2026-03-15 08:20:44] 2026-03-15 12:20:00,544 | INFO     | ready for new job
[2026-03-15 08:20:44] 2026-03-15 12:20:00,544 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-15 08:20:44] 2026-03-15 12:20:00,546 | INFO     | **************************************
[2026-03-15 08:20:44] 2026-03-15 12:20:00,546 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-15 08:20:44] 2026-03-15 12:20:00,546 | INFO     | **************************************
[2026-03-15 08:20:44] 2026-03-15 12:20:00,546 | INFO     | 
[2026-03-15 08:20:44] 2026-03-15 12:20:00,548 | INFO     | architecture information:
[2026-03-15 08:20:44] 2026-03-15 12:20:00,549 | INFO     | executing command: cat /etc/os-release
[2026-03-15 08:20:44] 2026-03-15 12:20:00,570 | INFO     | cat /etc/os-release:
[2026-03-15 08:20:44] NAME="CentOS Linux"
[2026-03-15 08:20:44] VERSION="7 (Core)"
[2026-03-15 08:20:44] ID="centos"
[2026-03-15 08:20:44] ID_LIKE="rhel fedora"
[2026-03-15 08:20:44] VERSION_ID="7"
[2026-03-15 08:20:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-15 08:20:44] ANSI_COLOR="0;31"
[2026-03-15 08:20:44] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-15 08:20:44] HOME_URL="https://www.centos.org/"
[2026-03-15 08:20:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-15 08:20:44] 
[2026-03-15 08:20:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-15 08:20:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-15 08:20:44] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-15 08:20:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-15 08:20:44] 
[2026-03-15 08:20:44] 2026-03-15 12:20:00,570 | INFO     | **************************************
[2026-03-15 08:20:44] 2026-03-15 12:20:01,073 | INFO     | executing command: df -mP /home/whitlerd/Desktop/BOINC/slots/12
[2026-03-15 08:20:44] 2026-03-15 12:20:01,090 | INFO     | sufficient remaining disk space (389676007424 B)
[2026-03-15 08:20:44] 2026-03-15 12:20:01,090 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-15 08:20:44] 2026-03-15 12:20:01,090 | INFO     | current server update state: UPDATING_FINAL
[2026-03-15 08:20:44] 2026-03-15 12:20:01,091 | INFO     | update_server=False
[2026-03-15 08:20:44] 2026-03-15 12:20:01,091 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-15 08:20:44] 2026-03-15 12:20:01,091 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-15 08:20:44] 2026-03-15 12:20:01,091 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-15 08:20:44] 2026-03-15 12:20:01,351 | INFO     | all job control threads have been joined
[2026-03-15 08:20:44] 2026-03-15 12:20:01,561 | INFO     | all payload control threads have been joined
[2026-03-15 08:20:44] 2026-03-15 12:20:01,897 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-15 08:20:44] 2026-03-15 12:20:01,898 | INFO     | aborting loop
[2026-03-15 08:20:44] 2026-03-15 12:20:02,096 | INFO     | [job] retrieve thread has finished
[2026-03-15 08:20:44] 2026-03-15 12:20:02,097 | INFO     | [job] queue monitor thread has finished
[2026-03-15 08:20:44] 2026-03-15 12:20:02,133 | INFO     | all data control threads have been joined
[2026-03-15 08:20:44] 2026-03-15 12:20:02,212 | INFO     | [payload] execute_payloads thread has finished
[2026-03-15 08:20:44] 2026-03-15 12:20:02,269 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-15 08:20:44] 2026-03-15 12:20:02,356 | INFO     | [job] control thread has finished
[2026-03-15 08:20:44] 2026-03-15 12:20:02,492 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-15 08:20:44] 2026-03-15 12:20:02,566 | INFO     | [payload] control thread has finished
[2026-03-15 08:20:44] 2026-03-15 12:20:02,739 | INFO     | [job] create_data_payload thread has finished
[2026-03-15 08:20:44] 2026-03-15 12:20:02,779 | INFO     | [payload] validate_post thread has finished
[2026-03-15 08:20:44] 2026-03-15 12:20:02,865 | INFO     | [job] validate thread has finished
[2026-03-15 08:20:44] 2026-03-15 12:20:02,903 | INFO     | [job] job monitor thread has finished
[2026-03-15 08:20:44] 2026-03-15 12:20:02,923 | INFO     | [payload] validate_pre thread has finished
[2026-03-15 08:20:44] 2026-03-15 12:20:03,097 | INFO     | [data] copytool_out thread has finished
[2026-03-15 08:20:44] 2026-03-15 12:20:03,139 | INFO     | [data] control thread has finished
[2026-03-15 08:20:44] 2026-03-15 12:20:03,334 | INFO     | [data] copytool_in thread has finished
[2026-03-15 08:20:44] 2026-03-15 12:20:03,527 | INFO     | [payload] failed_post thread has finished
[2026-03-15 08:20:44] 2026-03-15 12:20:06,497 | INFO     | [data] queue_monitor thread has finished
[2026-03-15 08:20:44] 2026-03-15 12:20:31,329 | INFO     | PID=2180092 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-15 08:20:44] 2026-03-15 12:20:31,330 | INFO     | .. there are 4 such processes running
[2026-03-15 08:20:44] 2026-03-15 12:20:31,330 | INFO     | found 0 job(s) in 20 queues
[2026-03-15 08:20:44] 2026-03-15 12:20:31,330 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-15 08:20:44] 2026-03-15 12:20:31,330 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-15 08:20:44] 2026-03-15 12:20:37,055 | INFO     | [monitor] cgroup control has ended
[2026-03-15 08:20:44] 2026-03-15 12:20:39,135 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 126117499717440)>', '<ExcThread(monitor, started 126116866021120)>']
[2026-03-15 08:20:44] 2026-03-15 12:20:39,371 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-15 08:20:44] 2026-03-15 12:20:39,371 | INFO     | [monitor] control thread has ended
[2026-03-15 08:20:44] 2026-03-15 12:20:44,160 | INFO     | all workflow threads have been joined
[2026-03-15 08:20:44] 2026-03-15 12:20:44,161 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-15 08:20:44] 2026-03-15 12:20:44,161 | INFO     | traces error code: 0
[2026-03-15 08:20:44] 2026-03-15 12:20:44,161 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-15 08:20:44] 2026-03-15 12:20:44,322 [wrapper] ==== pilot stdout END ====
[2026-03-15 08:20:44] 2026-03-15 12:20:44,327 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-15 08:20:44] 2026-03-15 12:20:44,332 [wrapper] pilotpid: 2180092
[2026-03-15 08:20:44] 2026-03-15 12:20:44,335 [wrapper] Pilot exit status: 0
[2026-03-15 08:20:44] 2026-03-15 12:20:44,347 [wrapper] pandaids: 7055793625
[2026-03-15 08:20:44] 2026-03-15 12:20:44,393 [wrapper] cleanup supervisor_pilot 2226068 2180093
[2026-03-15 08:20:44] 2026-03-15 12:20:44,397 [wrapper] Test setup, not cleaning
[2026-03-15 08:20:44] 2026-03-15 12:20:44,400 [wrapper] apfmon messages muted
[2026-03-15 08:20:44] 2026-03-15 12:20:44,404 [wrapper] ==== wrapper stdout END ====
[2026-03-15 08:20:44] 2026-03-15 12:20:44,407 [wrapper] ==== wrapper stderr END ====
[2026-03-15 08:20:44]  *** Error codes and diagnostics ***
[2026-03-15 08:20:44]     "exeErrorCode": 0,
[2026-03-15 08:20:44]     "exeErrorDiag": "",
[2026-03-15 08:20:44]     "pilotErrorCode": 0,
[2026-03-15 08:20:44]     "pilotErrorDiag": "",
[2026-03-15 08:20:44]  *** Listing of results directory ***
[2026-03-15 08:20:44] total 613588
[2026-03-15 08:20:44] -rw-r--r-- 1 whitlerd whitlerd    585013 Mar 15 06:25 pilot3.tar.gz
[2026-03-15 08:20:44] -rw-r--r-- 1 whitlerd whitlerd      5111 Mar 15 06:42 queuedata.json
[2026-03-15 08:20:44] -rwx------ 1 whitlerd whitlerd     36322 Mar 15 06:44 runpilot2-wrapper.sh
[2026-03-15 08:20:44] -rw-rw-r-- 1 whitlerd whitlerd       100 Mar 15 06:45 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-15 08:20:44] -rwxr-xr-x 1 whitlerd whitlerd      7986 Mar 15 06:45 run_atlas
[2026-03-15 08:20:44] -rw-rw-r-- 1 whitlerd whitlerd       105 Mar 15 06:45 job.xml
[2026-03-15 08:20:44] -rw-r--r-- 2 whitlerd whitlerd 440484851 Mar 15 06:45 EVNT.46701403._000884.pool.root.1
[2026-03-15 08:20:44] -rw-r--r-- 2 whitlerd whitlerd     15845 Mar 15 06:45 start_atlas.sh
[2026-03-15 08:20:44] drwxrwx--x 2 whitlerd whitlerd      4096 Mar 15 06:45 shared
[2026-03-15 08:20:44] -rw-r--r-- 2 whitlerd whitlerd    597528 Mar 15 06:45 input.tar.gz
[2026-03-15 08:20:44] -rw-rw-r-- 1 whitlerd whitlerd      9324 Mar 15 06:45 init_data.xml
[2026-03-15 08:20:44] -rw-rw-r-- 1 whitlerd whitlerd         0 Mar 15 06:45 boinc_setup_complete
[2026-03-15 08:20:44] -rw-rw-r-- 1 whitlerd whitlerd         0 Mar 15 06:45 boinc_lockfile
[2026-03-15 08:20:44] -rw-rw-r-- 1 whitlerd whitlerd      2561 Mar 15 06:45 pandaJob.out
[2026-03-15 08:20:44] -rw------- 1 whitlerd whitlerd   1006481 Mar 15 06:45 agis_schedconf.cvmfs.json
[2026-03-15 08:20:44] -rw------- 1 whitlerd whitlerd   1511579 Mar 15 06:45 agis_ddmendpoints.agis.ALL.json
[2026-03-15 08:20:44] -rw------- 1 whitlerd whitlerd       438 Mar 15 06:45 workernode_map.json
[2026-03-15 08:20:44] drwx------ 5 whitlerd whitlerd      4096 Mar 15 06:45 pilot3
[2026-03-15 08:20:44] -rw------- 1 whitlerd whitlerd 181671234 Mar 15 08:19 HITS.48955006._052663.pool.root.1
[2026-03-15 08:20:44] -rw-rw-r-- 1 whitlerd whitlerd       530 Mar 15 08:19 boinc_task_state.xml
[2026-03-15 08:20:44] -rw------- 1 whitlerd whitlerd        95 Mar 15 08:19 pilot_heartbeat.json
[2026-03-15 08:20:44] -rw------- 1 whitlerd whitlerd      1031 Mar 15 08:19 memory_monitor_summary.json
[2026-03-15 08:20:44] -rw------- 1 whitlerd whitlerd    267815 Mar 15 08:19 log.48955006._052663.job.log.tgz.1
[2026-03-15 08:20:44] -rw------- 1 whitlerd whitlerd      6340 Mar 15 08:19 heartbeat.json
[2026-03-15 08:20:44] -rw-rw-r-- 1 whitlerd whitlerd        27 Mar 15 08:20 wrapper_checkpoint.txt
[2026-03-15 08:20:44] -rw-rw-r-- 1 whitlerd whitlerd      8192 Mar 15 08:20 boinc_mmap_file
[2026-03-15 08:20:44] -rw------- 1 whitlerd whitlerd      4835 Mar 15 08:20 pilotlog.txt
[2026-03-15 08:20:44] -rw------- 1 whitlerd whitlerd    838946 Mar 15 08:20 log.48955006._052663.job.log.1
[2026-03-15 08:20:44] -rw------- 1 whitlerd whitlerd       357 Mar 15 08:20 output.list
[2026-03-15 08:20:44] -rw-rw-r-- 1 whitlerd whitlerd       620 Mar 15 08:20 runtime_log
[2026-03-15 08:20:44] -rw------- 1 whitlerd whitlerd   1126400 Mar 15 08:20 result.tar.gz
[2026-03-15 08:20:44] -rw------- 1 whitlerd whitlerd       649 Mar 15 08:20 wW0KDma8xL9n9Rq4apOajLDm4fhM0noT9bVooX4SDmz9rLDm00yqtm.diag
[2026-03-15 08:20:44] -rw-rw-r-- 1 whitlerd whitlerd      9040 Mar 15 08:20 runtime_log.err
[2026-03-15 08:20:44] -rw-rw-r-- 1 whitlerd whitlerd     21935 Mar 15 08:20 stderr.txt
[2026-03-15 08:20:44] HITS file was successfully produced:
[2026-03-15 08:20:44] -rw------- 1 whitlerd whitlerd 181671234 Mar 15 08:19 shared/HITS.pool.root.1
[2026-03-15 08:20:44]  *** Contents of shared directory: ***
[2026-03-15 08:20:44] total 609288
[2026-03-15 08:20:44] -rw-r--r-- 2 whitlerd whitlerd 440484851 Mar 15 06:45 ATLAS.root_0
[2026-03-15 08:20:44] -rw-r--r-- 2 whitlerd whitlerd     15845 Mar 15 06:45 start_atlas.sh
[2026-03-15 08:20:44] -rw-r--r-- 2 whitlerd whitlerd    597528 Mar 15 06:45 input.tar.gz
[2026-03-15 08:20:44] -rw------- 1 whitlerd whitlerd 181671234 Mar 15 08:19 HITS.pool.root.1
[2026-03-15 08:20:44] -rw------- 1 whitlerd whitlerd   1126400 Mar 15 08:20 result.tar.gz
08:20:46 (2170901): run_atlas exited; CPU time 22028.010358
08:20:46 (2170901): called boinc_finish(0)

</stderr_txt>
]]>

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