Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
04:48:04 (21451): wrapper (7.7.26015): starting
04:48:04 (21451): wrapper: running run_atlas (--nthreads 12)
[2026-03-15 04:48:04] Arguments: --nthreads 12
[2026-03-15 04:48:04] Threads: 12
[2026-03-15 04:48:04] Checking for CVMFS
[2026-03-15 04:48:04] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-15 04:48:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-15 04:48:05] Running cvmfs_config stat atlas.cern.ch
[2026-03-15 04:48:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-15 04:48:05] 2.11.2.0 2981 444375 97780 157307 2 1 18923414 20275201 1 130560 1 193787145 99.957 25183683 17214 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-15 04:48:05] CVMFS is ok
[2026-03-15 04:48:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-15 04:48:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-15 04:48:05] Further information can be found at the LHC@home message board.
[2026-03-15 04:48:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-15 04:48:05] Checking for apptainer binary...
[2026-03-15 04:48:05] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-15 04:48:05] Running /usr/bin/apptainer --version
[2026-03-15 04:48:05] apptainer version 1.3.2-1.el7
[2026-03-15 04:48:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-15 04:48:06] c-205-30.aglt2.org
[2026-03-15 04:48:06] apptainer works
[2026-03-15 04:48:06] Set ATHENA_PROC_NUMBER=12
[2026-03-15 04:48:06] Set ATHENA_CORE_NUMBER=12
[2026-03-15 04:48:06] Starting ATLAS job with PandaID=7038574876
[2026-03-15 04:48:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-15 05:57:40]  *** The last 200 lines of the pilot log: ***
[2026-03-15 05:57:40]  replicas=None
[2026-03-15 05:57:40]  scope=mc23_13p6TeV
[2026-03-15 05:57:40]  status=None
[2026-03-15 05:57:40]  status_code=0
[2026-03-15 05:57:40]  storage_token=
[2026-03-15 05:57:40]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-7038574876/log.48955006._004368.job.log.tgz.1
[2026-03-15 05:57:40]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/bb/72/log.48955006._004368.job.log.tgz.1
[2026-03-15 05:57:40]  workdir=None
[2026-03-15 05:57:40] ]
[2026-03-15 05:57:40] 2026-03-15 09:56:49,037 | INFO     | transferring file log.48955006._004368.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-7038574876/log.48955006._004368.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-03-15 05:57:40] 2026-03-15 09:56:49,037 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-7038574876/log.48955006._004368.job.log.tgz.1 /tmp/boinchome/slots/0/log.48955006._004368.job
[2026-03-15 05:57:40] 2026-03-15 09:56:49,059 | INFO     | adding to output.list: log.48955006._004368.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/bb/72/log.48955006._004368.job.log.tg
[2026-03-15 05:57:40] 2026-03-15 09:56:49,060 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-15 05:57:40] 2026-03-15 09:56:49,060 | INFO     | summary of transferred files:
[2026-03-15 05:57:40] 2026-03-15 09:56:49,060 | INFO     |  -- lfn=log.48955006._004368.job.log.tgz.1, status_code=0, status=transferred
[2026-03-15 05:57:40] 2026-03-15 09:56:49,061 | INFO     | stage-out finished correctly
[2026-03-15 05:57:40] 2026-03-15 09:56:49,453 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-15 05:57:40] 2026-03-15 09:56:49,576 | INFO     | job 7038574876 has state=finished
[2026-03-15 05:57:40] 2026-03-15 09:56:49,576 | INFO     | preparing for final server update for job 7038574876 in state='finished'
[2026-03-15 05:57:40] 2026-03-15 09:56:49,577 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-7038574876/jobReport.json
[2026-03-15 05:57:40] 2026-03-15 09:56:49,579 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-03-15 05:57:40] 2026-03-15 09:56:49,580 | INFO     | this job has now completed (state=finished)
[2026-03-15 05:57:40] 2026-03-15 09:56:49,580 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-15 05:57:40] 2026-03-15 09:56:49,580 | INFO     | log transfer has been attempted: DONE
[2026-03-15 05:57:40] 2026-03-15 09:56:49,580 | INFO     | job 7038574876 has finished - writing final server update
[2026-03-15 05:57:40] 2026-03-15 09:56:49,581 | INFO     | total number of processed events: 400 (read)
[2026-03-15 05:57:40] 2026-03-15 09:56:49,583 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7038574876/memory_monitor_summary.json (trf name=prmon)
[2026-03-15 05:57:40] 2026-03-15 09:56:49,583 | INFO     | extracted standard info from prmon json
[2026-03-15 05:57:40] 2026-03-15 09:56:49,583 | INFO     | extracted standard memory fields from prmon json
[2026-03-15 05:57:40] 2026-03-15 09:56:49,584 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-15 05:57:40] 2026-03-15 09:56:49,584 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-15 05:57:40] 2026-03-15 09:56:49,584 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-15 05:57:40] 2026-03-15 09:56:49,586 | INFO     | fitting pss+swap vs Time
[2026-03-15 05:57:40] 2026-03-15 09:56:49,586 | INFO     | sum of square deviations: 66959395.0
[2026-03-15 05:57:40] 2026-03-15 09:56:49,586 | INFO     | sum of deviations: -5216259572.000002
[2026-03-15 05:57:40] 2026-03-15 09:56:49,586 | INFO     | mean x: 1773566636.5
[2026-03-15 05:57:40] 2026-03-15 09:56:49,587 | INFO     | mean y: 2754964.466666667
[2026-03-15 05:57:40] 2026-03-15 09:56:49,587 | INFO     | intersect: 138166845966.52805
[2026-03-15 05:57:40] 2026-03-15 09:56:49,587 | INFO     | chi2: 0.07644776639795324
[2026-03-15 05:57:40] 2026-03-15 09:56:49,587 | INFO     | current memory leak: -77.90 B/s (using 60 data points, chi2=0.08)
[2026-03-15 05:57:40] 2026-03-15 09:56:49,587 | INFO     | could have reported an average CPU frequency of 1762 MHz (6 samples)
[2026-03-15 05:57:40] 2026-03-15 09:56:49,588 | INFO     | ..............................
[2026-03-15 05:57:40] 2026-03-15 09:56:49,588 | INFO     | . Timing measurements:
[2026-03-15 05:57:40] 2026-03-15 09:56:49,588 | INFO     | . get job = 0 s
[2026-03-15 05:57:40] 2026-03-15 09:56:49,588 | INFO     | . initial setup = 7 s
[2026-03-15 05:57:40] 2026-03-15 09:56:49,588 | INFO     | . payload setup = 7 s
[2026-03-15 05:57:40] 2026-03-15 09:56:49,588 | INFO     | . stage-in = 0 s
[2026-03-15 05:57:40] 2026-03-15 09:56:49,588 | INFO     | . payload execution = 4078 s
[2026-03-15 05:57:40] 2026-03-15 09:56:49,588 | INFO     | . stage-out = 0 s
[2026-03-15 05:57:40] 2026-03-15 09:56:49,589 | INFO     | . log creation = 0 s
[2026-03-15 05:57:40] 2026-03-15 09:56:49,589 | INFO     | ..............................
[2026-03-15 05:57:40] 2026-03-15 09:56:49,666 | INFO     | 
[2026-03-15 05:57:40] 2026-03-15 09:56:49,666 | INFO     | job summary report
[2026-03-15 05:57:40] 2026-03-15 09:56:49,666 | INFO     | --------------------------------------------------
[2026-03-15 05:57:40] 2026-03-15 09:56:49,667 | INFO     | PanDA job id: 7038574876
[2026-03-15 05:57:40] 2026-03-15 09:56:49,667 | INFO     | task id: 48955006
[2026-03-15 05:57:40] 2026-03-15 09:56:49,667 | INFO     | errors: (none)
[2026-03-15 05:57:40] 2026-03-15 09:56:49,667 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-15 05:57:40] 2026-03-15 09:56:49,667 | INFO     | pilot state: finished 
[2026-03-15 05:57:40] 2026-03-15 09:56:49,667 | INFO     | transexitcode: 0
[2026-03-15 05:57:40] 2026-03-15 09:56:49,668 | INFO     | exeerrorcode: 0
[2026-03-15 05:57:40] 2026-03-15 09:56:49,668 | INFO     | exeerrordiag: 
[2026-03-15 05:57:40] 2026-03-15 09:56:49,668 | INFO     | exitcode: 0
[2026-03-15 05:57:40] 2026-03-15 09:56:49,668 | INFO     | exitmsg: OK
[2026-03-15 05:57:40] 2026-03-15 09:56:49,668 | INFO     | cpuconsumptiontime: 43325 s
[2026-03-15 05:57:40] 2026-03-15 09:56:49,668 | INFO     | nevents: 400
[2026-03-15 05:57:40] 2026-03-15 09:56:49,669 | INFO     | neventsw: 0
[2026-03-15 05:57:40] 2026-03-15 09:56:49,669 | INFO     | pid: 29884
[2026-03-15 05:57:40] 2026-03-15 09:56:49,669 | INFO     | pgrp: 29884
[2026-03-15 05:57:40] 2026-03-15 09:56:49,669 | INFO     | corecount: 12
[2026-03-15 05:57:40] 2026-03-15 09:56:49,669 | INFO     | event service: False
[2026-03-15 05:57:40] 2026-03-15 09:56:49,669 | INFO     | sizes: {0: 2279791, 1: 2280252, 11: 2280252, 4089: 2306107, 4090: 2315105, 4091: 2315483}
[2026-03-15 05:57:40] 2026-03-15 09:56:49,669 | INFO     | --------------------------------------------------
[2026-03-15 05:57:40] 2026-03-15 09:56:49,670 | INFO     | 
[2026-03-15 05:57:40] 2026-03-15 09:56:49,670 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-03-15 05:57:40] 2026-03-15 09:56:49,683 | INFO     | time since job start (4101s) is within the limit (349056.0s)
[2026-03-15 05:57:40] 2026-03-15 09:56:49,693 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-15 05:57:40] 2026-03-15 09:56:49,693 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-15 05:57:40] 2026-03-15 09:56:49,693 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-15 05:57:40] 2026-03-15 09:56:49,693 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-15 05:57:40] 2026-03-15 09:56:49,694 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-15 05:57:40] 2026-03-15 09:56:49,694 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-15 05:57:40] 2026-03-15 09:56:49,694 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-15 05:57:40] 2026-03-15 09:56:49,694 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-15 05:57:40] 2026-03-15 09:56:49,694 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-15 05:57:40] 2026-03-15 09:56:49,694 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-15 05:57:40] 2026-03-15 09:56:49,695 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-15 05:57:40] 2026-03-15 09:56:49,695 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-15 05:57:40] 2026-03-15 09:56:49,695 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-15 05:57:40] 2026-03-15 09:56:49,695 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-15 05:57:40] 2026-03-15 09:56:49,695 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-15 05:57:40] 2026-03-15 09:56:49,695 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-15 05:57:40] 2026-03-15 09:56:49,696 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-15 05:57:40] 2026-03-15 09:56:49,696 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-15 05:57:40] 2026-03-15 09:56:49,696 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-15 05:57:40] 2026-03-15 09:56:49,696 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-15 05:57:40] 2026-03-15 09:56:49,696 | INFO     | job 7038574876 has completed (purged errors)
[2026-03-15 05:57:40] 2026-03-15 09:56:49,697 | INFO     | overall cleanup function is called
[2026-03-15 05:57:40] 2026-03-15 09:56:50,705 | INFO     | --- collectZombieJob: --- 10, [29884]
[2026-03-15 05:57:40] 2026-03-15 09:56:50,705 | INFO     | zombie collector waiting for pid 29884
[2026-03-15 05:57:40] 2026-03-15 09:56:50,705 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-15 05:57:40] 2026-03-15 09:56:50,706 | INFO     | collected zombie processes
[2026-03-15 05:57:40] 2026-03-15 09:56:50,706 | INFO     | will attempt to kill all subprocesses of pid=29884
[2026-03-15 05:57:40] 2026-03-15 09:56:50,901 | INFO     | PID=25501 has CPU usage=7.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-15 05:57:40] 2026-03-15 09:56:50,905 | INFO     | process IDs to be killed: [29884] (in reverse order)
[2026-03-15 05:57:40] 2026-03-15 09:56:50,956 | WARNING  | found no corresponding commands to process id(s)
[2026-03-15 05:57:40] 2026-03-15 09:56:50,957 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-15 05:57:40] 2026-03-15 09:56:50,960 | INFO     | did not find any defunct processes belonging to 29884
[2026-03-15 05:57:40] 2026-03-15 09:56:50,963 | INFO     | did not find any defunct processes belonging to 29884
[2026-03-15 05:57:40] 2026-03-15 09:56:50,963 | INFO     | ready for new job
[2026-03-15 05:57:40] 2026-03-15 09:56:50,963 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-15 05:57:40] 2026-03-15 09:56:50,964 | INFO     | **************************************
[2026-03-15 05:57:40] 2026-03-15 09:56:50,965 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-15 05:57:40] 2026-03-15 09:56:50,965 | INFO     | **************************************
[2026-03-15 05:57:40] 2026-03-15 09:56:50,965 | INFO     | 
[2026-03-15 05:57:40] 2026-03-15 09:56:50,965 | INFO     | architecture information:
[2026-03-15 05:57:40] 2026-03-15 09:56:50,966 | INFO     | executing command: cat /etc/os-release
[2026-03-15 05:57:40] 2026-03-15 09:56:50,981 | INFO     | cat /etc/os-release:
[2026-03-15 05:57:40] NAME="CentOS Linux"
[2026-03-15 05:57:40] VERSION="7 (Core)"
[2026-03-15 05:57:40] ID="centos"
[2026-03-15 05:57:40] ID_LIKE="rhel fedora"
[2026-03-15 05:57:40] VERSION_ID="7"
[2026-03-15 05:57:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-15 05:57:40] ANSI_COLOR="0;31"
[2026-03-15 05:57:40] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-15 05:57:40] HOME_URL="https://www.centos.org/"
[2026-03-15 05:57:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-15 05:57:40] 
[2026-03-15 05:57:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-15 05:57:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-15 05:57:40] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-15 05:57:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-15 05:57:40] 
[2026-03-15 05:57:40] 2026-03-15 09:56:50,982 | INFO     | **************************************
[2026-03-15 05:57:40] 2026-03-15 09:56:51,483 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-03-15 05:57:40] 2026-03-15 09:56:51,499 | INFO     | sufficient remaining disk space (28893511680 B)
[2026-03-15 05:57:40] 2026-03-15 09:56:51,500 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-15 05:57:40] 2026-03-15 09:56:51,500 | INFO     | current server update state: UPDATING_FINAL
[2026-03-15 05:57:40] 2026-03-15 09:56:51,500 | INFO     | update_server=False
[2026-03-15 05:57:40] 2026-03-15 09:56:51,500 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-15 05:57:40] 2026-03-15 09:56:51,501 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-15 05:57:40] 2026-03-15 09:56:51,501 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-03-15 05:57:40] 2026-03-15 09:56:51,501 | INFO     | found 0 job(s) in 20 queues
[2026-03-15 05:57:40] 2026-03-15 09:56:51,502 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-15 05:57:40] 2026-03-15 09:56:51,502 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-15 05:57:40] 2026-03-15 09:56:51,502 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-15 05:57:40] 2026-03-15 09:56:51,603 | INFO     | all data control threads have been joined
[2026-03-15 05:57:40] 2026-03-15 09:56:51,653 | INFO     | all payload control threads have been joined
[2026-03-15 05:57:40] 2026-03-15 09:56:52,159 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-15 05:57:40] 2026-03-15 09:56:52,503 | INFO     | [job] queue monitor thread has finished
[2026-03-15 05:57:40] 2026-03-15 09:56:52,506 | INFO     | [job] retrieve thread has finished
[2026-03-15 05:57:40] 2026-03-15 09:56:52,521 | INFO     | [job] create_data_payload thread has finished
[2026-03-15 05:57:40] 2026-03-15 09:56:52,534 | INFO     | [payload] validate_post thread has finished
[2026-03-15 05:57:40] 2026-03-15 09:56:52,605 | INFO     | [data] control thread has finished
[2026-03-15 05:57:40] 2026-03-15 09:56:52,659 | INFO     | [payload] control thread has finished
[2026-03-15 05:57:40] 2026-03-15 09:56:52,817 | INFO     | all job control threads have been joined
[2026-03-15 05:57:40] 2026-03-15 09:56:52,888 | INFO     | [payload] validate_pre thread has finished
[2026-03-15 05:57:40] 2026-03-15 09:56:53,078 | INFO     | [data] copytool_in thread has finished
[2026-03-15 05:57:40] 2026-03-15 09:56:53,547 | INFO     | [payload] failed_post thread has finished
[2026-03-15 05:57:40] 2026-03-15 09:56:53,691 | INFO     | [payload] execute_payloads thread has finished
[2026-03-15 05:57:40] 2026-03-15 09:56:53,767 | INFO     | [job] validate thread has finished
[2026-03-15 05:57:40] 2026-03-15 09:56:53,792 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-15 05:57:40] 2026-03-15 09:56:53,822 | INFO     | [job] control thread has finished
[2026-03-15 05:57:40] 2026-03-15 09:56:54,164 | INFO     | [data] copytool_out thread has finished
[2026-03-15 05:57:40] 2026-03-15 09:56:54,191 | WARNING  | process 29884 can no longer be monitored (due to stat problems) - aborting
[2026-03-15 05:57:40] 2026-03-15 09:56:54,260 | INFO     | using path: /tmp/boinchome/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-15 05:57:40] 2026-03-15 09:56:54,261 | INFO     | using path: /tmp/boinchome/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-15 05:57:40] 2026-03-15 09:56:54,261 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-03-15 05:57:40] 2026-03-15 09:56:54,261 | WARNING  | maxPSS not found in memory monitor output
[2026-03-15 05:57:40] 2026-03-15 09:56:54,262 | INFO     | skipping file size check of payload stdout file (/tmp/boinchome/slots/0/PanDA_Pilot-7038574876/payload.stdout) since it has not been created yet
[2026-03-15 05:57:40] 2026-03-15 09:56:54,262 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-03-15 05:57:40] 2026-03-15 09:56:54,278 | INFO     | sufficient remaining disk space (28893511680 B)
[2026-03-15 05:57:40] 2026-03-15 09:56:54,278 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-03-15 05:57:40] 2026-03-15 09:56:54,278 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/0/PanDA_Pilot-7038574876/HITS.48955006._004368.pool.root.1 since it does not exist
[2026-03-15 05:57:40] 2026-03-15 09:56:54,365 | INFO     | number of running child processes to parent process 29884: 1
[2026-03-15 05:57:40] 2026-03-15 09:56:54,365 | INFO     | maximum number of monitored processes: 6
[2026-03-15 05:57:40] 2026-03-15 09:56:54,365 | INFO     | aborting job monitoring since job object (job id=7038574876) has expired
[2026-03-15 05:57:40] 2026-03-15 09:56:54,365 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-15 05:57:40] 2026-03-15 09:56:54,365 | INFO     | will abort loop
[2026-03-15 05:57:40] 2026-03-15 09:56:55,371 | INFO     | [job] job monitor thread has finished
[2026-03-15 05:57:40] 2026-03-15 09:56:55,508 | INFO     | [data] queue_monitor thread has finished
[2026-03-15 05:57:40] 2026-03-15 09:57:34,005 | INFO     | [monitor] cgroup control has ended
[2026-03-15 05:57:40] 2026-03-15 09:57:35,644 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140122180880192)>', '<ExcThread(monitor, started 140121210869504)>']
[2026-03-15 05:57:40] 2026-03-15 09:57:35,715 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-15 05:57:40] 2026-03-15 09:57:35,715 | INFO     | [monitor] control thread has ended
[2026-03-15 05:57:40] 2026-03-15 09:57:40,669 | INFO     | all workflow threads have been joined
[2026-03-15 05:57:40] 2026-03-15 09:57:40,669 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-15 05:57:40] 2026-03-15 09:57:40,669 | INFO     | traces error code: 0
[2026-03-15 05:57:40] 2026-03-15 09:57:40,670 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-15 05:57:40] 2026-03-15 09:57:40,762 [wrapper] ==== pilot stdout END ====
[2026-03-15 05:57:40] 2026-03-15 09:57:40,766 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-15 05:57:40] 2026-03-15 09:57:40,769 [wrapper] pilotpid: 25501
[2026-03-15 05:57:40] 2026-03-15 09:57:40,773 [wrapper] Pilot exit status: 0
[2026-03-15 05:57:40] 2026-03-15 09:57:40,788 [wrapper] pandaids: 7038574876
[2026-03-15 05:57:40] 2026-03-15 09:57:40,830 [wrapper] cleanup supervisor_pilot 15866 25502
[2026-03-15 05:57:40] 2026-03-15 09:57:40,834 [wrapper] Test setup, not cleaning
[2026-03-15 05:57:40] 2026-03-15 09:57:40,837 [wrapper] apfmon messages muted
[2026-03-15 05:57:40] 2026-03-15 09:57:40,841 [wrapper] ==== wrapper stdout END ====
[2026-03-15 05:57:40] 2026-03-15 09:57:40,844 [wrapper] ==== wrapper stderr END ====
[2026-03-15 05:57:40]  *** Error codes and diagnostics ***
[2026-03-15 05:57:40]     "exeErrorCode": 0,
[2026-03-15 05:57:40]     "exeErrorDiag": "",
[2026-03-15 05:57:40]     "pilotErrorCode": 0,
[2026-03-15 05:57:40]     "pilotErrorDiag": "",
[2026-03-15 05:57:40]  *** Listing of results directory ***
[2026-03-15 05:57:40] total 620052
[2026-03-15 05:57:40] -rw-r--r-- 1 boincer umatlas    584627 Mar  5 03:08 pilot3.tar.gz
[2026-03-15 05:57:40] -rwx------ 1 boincer umatlas     36322 Mar  5 03:08 runpilot2-wrapper.sh
[2026-03-15 05:57:40] -rw-r--r-- 1 boincer umatlas      5111 Mar  5 03:09 queuedata.json
[2026-03-15 05:57:40] -rw-r--r-- 1 boincer umatlas       100 Mar 15 04:48 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-15 05:57:40] -rwxr-xr-x 1 boincer umatlas      7986 Mar 15 04:48 run_atlas
[2026-03-15 05:57:40] -rw-r--r-- 1 boincer umatlas       105 Mar 15 04:48 job.xml
[2026-03-15 05:57:40] -rw-r--r-- 2 boincer umatlas 444065782 Mar 15 04:48 EVNT.46701403._000088.pool.root.1
[2026-03-15 05:57:40] -rw-r--r-- 2 boincer umatlas     15845 Mar 15 04:48 start_atlas.sh
[2026-03-15 05:57:40] drwxrwx--x 2 boincer umatlas      4096 Mar 15 04:48 shared
[2026-03-15 05:57:40] -rw-r--r-- 2 boincer umatlas    597956 Mar 15 04:48 input.tar.gz
[2026-03-15 05:57:40] -rw-r--r-- 1 boincer umatlas         0 Mar 15 04:48 boinc_lockfile
[2026-03-15 05:57:40] -rw-r--r-- 1 boincer umatlas      2561 Mar 15 04:48 pandaJob.out
[2026-03-15 05:57:40] -rw------- 1 boincer umatlas        57 Mar 15 04:48 setup.sh.local
[2026-03-15 05:57:40] -rw------- 1 boincer umatlas   1006481 Mar 15 04:48 agis_schedconf.cvmfs.json
[2026-03-15 05:57:40] -rw------- 1 boincer umatlas   1511579 Mar 15 04:48 agis_ddmendpoints.agis.ALL.json
[2026-03-15 05:57:40] -rw------- 1 boincer umatlas       445 Mar 15 04:48 workernode_map.json
[2026-03-15 05:57:40] drwx------ 5 boincer umatlas      4096 Mar 15 04:48 pilot3
[2026-03-15 05:57:40] -rw-r--r-- 1 boincer umatlas      5953 Mar 15 05:54 init_data.xml
[2026-03-15 05:57:40] -rw-r--r-- 1 boincer umatlas       530 Mar 15 05:56 boinc_task_state.xml
[2026-03-15 05:57:40] -rw------- 1 boincer umatlas        95 Mar 15 05:56 pilot_heartbeat.json
[2026-03-15 05:57:40] -rw------- 1 boincer umatlas 184958005 Mar 15 05:56 HITS.48955006._004368.pool.root.1
[2026-03-15 05:57:40] -rw------- 1 boincer umatlas      1046 Mar 15 05:56 memory_monitor_summary.json
[2026-03-15 05:57:40] -rw------- 1 boincer umatlas    384380 Mar 15 05:56 log.48955006._004368.job.log.tgz.1
[2026-03-15 05:57:40] -rw------- 1 boincer umatlas      6420 Mar 15 05:56 heartbeat.json
[2026-03-15 05:57:40] -rw-r--r-- 1 boincer umatlas      8192 Mar 15 05:57 boinc_mmap_file
[2026-03-15 05:57:40] -rw-r--r-- 1 boincer umatlas        27 Mar 15 05:57 wrapper_checkpoint.txt
[2026-03-15 05:57:40] -rw------- 1 boincer umatlas      6029 Mar 15 05:57 pilotlog.txt
[2026-03-15 05:57:40] -rw------- 1 boincer umatlas    602805 Mar 15 05:57 log.48955006._004368.job.log.1
[2026-03-15 05:57:40] -rw------- 1 boincer umatlas       357 Mar 15 05:57 output.list
[2026-03-15 05:57:40] -rw-r--r-- 1 boincer umatlas       620 Mar 15 05:57 runtime_log
[2026-03-15 05:57:40] -rw------- 1 boincer umatlas   1003520 Mar 15 05:57 result.tar.gz
[2026-03-15 05:57:40] -rw-r--r-- 1 boincer umatlas      9343 Mar 15 05:57 runtime_log.err
[2026-03-15 05:57:40] -rw------- 1 boincer umatlas       659 Mar 15 05:57 2o2MDmHwII9n9Rq4apOajLDm4fhM0noT9bVooX4SDm7ELLDmsi0MSo.diag
[2026-03-15 05:57:40] -rw-r--r-- 1 boincer umatlas     22046 Mar 15 05:57 stderr.txt
[2026-03-15 05:57:40] HITS file was successfully produced:
[2026-03-15 05:57:40] -rw------- 1 boincer umatlas 184958005 Mar 15 05:56 shared/HITS.pool.root.1
[2026-03-15 05:57:40]  *** Contents of shared directory: ***
[2026-03-15 05:57:40] total 615868
[2026-03-15 05:57:40] -rw-r--r-- 2 boincer umatlas 444065782 Mar 15 04:48 ATLAS.root_0
[2026-03-15 05:57:40] -rw-r--r-- 2 boincer umatlas     15845 Mar 15 04:48 start_atlas.sh
[2026-03-15 05:57:40] -rw-r--r-- 2 boincer umatlas    597956 Mar 15 04:48 input.tar.gz
[2026-03-15 05:57:40] -rw------- 1 boincer umatlas 184958005 Mar 15 05:56 HITS.pool.root.1
[2026-03-15 05:57:40] -rw------- 1 boincer umatlas   1003520 Mar 15 05:57 result.tar.gz
05:57:42 (21451): run_atlas exited; CPU time 43308.212074
05:57:42 (21451): called boinc_finish(0)

</stderr_txt>
]]>

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