Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:04:25 (3527): wrapper (7.7.26015): starting
12:04:25 (3527): wrapper: running run_atlas (--nthreads 8)
[2026-03-15 12:04:25] Arguments: --nthreads 8
[2026-03-15 12:04:25] Threads: 8
[2026-03-15 12:04:25] Checking for CVMFS
[2026-03-15 12:04:25] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-15 12:04:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-15 12:04:28] Running cvmfs_config stat atlas.cern.ch
[2026-03-15 12:04:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-15 12:04:29] 2.11.2.0 5913 128914 139464 157310 0 54 18418121 25165825 4784 130560 152 46170455 99.814 37038512 1159 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-03-15 12:04:29] CVMFS is ok
[2026-03-15 12:04:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-15 12:04:29] Checking for apptainer binary...
[2026-03-15 12:04:29] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-15 12:04:29] Running /usr/bin/apptainer --version
[2026-03-15 12:04:29] apptainer version 1.3.2-1.el7
[2026-03-15 12:04:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-15 12:04:42] cg-vwn443.simple-grid.lan
[2026-03-15 12:04:42] apptainer works
[2026-03-15 12:04:42] Set ATHENA_PROC_NUMBER=8
[2026-03-15 12:04:42] Set ATHENA_CORE_NUMBER=8
[2026-03-15 12:04:42] Starting ATLAS job with PandaID=7055691919
[2026-03-15 12:04:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-15 15:55:42]  *** The last 200 lines of the pilot log: ***
[2026-03-15 15:55:43] 2026-03-15 14:54:33,363 | INFO     | total number of processed events: 400 (read)
[2026-03-15 15:55:43] 2026-03-15 14:54:33,365 | INFO     | using path: /var/lib/boinc/slots/2/PanDA_Pilot-7055691919/memory_monitor_summary.json (trf name=prmon)
[2026-03-15 15:55:43] 2026-03-15 14:54:33,366 | INFO     | extracted standard info from prmon json
[2026-03-15 15:55:43] 2026-03-15 14:54:33,366 | INFO     | extracted standard memory fields from prmon json
[2026-03-15 15:55:43] 2026-03-15 14:54:33,366 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-15 15:55:43] 2026-03-15 14:54:33,366 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-15 15:55:43] 2026-03-15 14:54:33,366 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-15 15:55:43] 2026-03-15 14:54:33,371 | INFO     | fitting pss+swap vs Time
[2026-03-15 15:55:43] 2026-03-15 14:54:33,372 | INFO     | sum of square deviations: 3168461268.0
[2026-03-15 15:55:43] 2026-03-15 14:54:33,373 | INFO     | sum of deviations: 27473839105.0
[2026-03-15 15:55:43] 2026-03-15 14:54:33,374 | INFO     | mean x: 1773579853.0
[2026-03-15 15:55:43] 2026-03-15 14:54:33,374 | INFO     | mean y: 2465620.7695852537
[2026-03-15 15:55:43] 2026-03-15 14:54:33,374 | INFO     | intersect: -15376307670.011116
[2026-03-15 15:55:43] 2026-03-15 14:54:33,374 | INFO     | chi2: 2.6608589963346585
[2026-03-15 15:55:43] 2026-03-15 14:54:33,375 | INFO     | sum of square deviations: 2954447953.0
[2026-03-15 15:55:43] 2026-03-15 14:54:33,376 | INFO     | sum of deviations: 41063731059.0
[2026-03-15 15:55:43] 2026-03-15 14:54:33,377 | INFO     | mean x: 1773579700.5
[2026-03-15 15:55:43] 2026-03-15 14:54:33,377 | INFO     | mean y: 2475113.886792453
[2026-03-15 15:55:43] 2026-03-15 14:54:33,377 | INFO     | intersect: -24648424476.0285
[2026-03-15 15:55:43] 2026-03-15 14:54:33,377 | INFO     | chi2: 1.8937448658547391
[2026-03-15 15:55:43] 2026-03-15 14:54:33,377 | INFO     | current chi2=1.8937448658547391 (change=28.82956712612812 %)
[2026-03-15 15:55:43] 2026-03-15 14:54:33,379 | INFO     | sum of square deviations: 2750295288.0
[2026-03-15 15:55:43] 2026-03-15 14:54:33,381 | INFO     | sum of deviations: 40081290312.99999
[2026-03-15 15:55:43] 2026-03-15 14:54:33,381 | INFO     | mean x: 1773579548.0
[2026-03-15 15:55:43] 2026-03-15 14:54:33,381 | INFO     | mean y: 2474379.888888889
[2026-03-15 15:55:43] 2026-03-15 14:54:33,382 | INFO     | intersect: -25844698128.00631
[2026-03-15 15:55:43] 2026-03-15 14:54:33,382 | INFO     | chi2: 1.8947440602332213
[2026-03-15 15:55:43] 2026-03-15 14:54:33,382 | INFO     | current chi2=1.8947440602332213 (change=-0.052762882503245026 %)
[2026-03-15 15:55:43] 2026-03-15 14:54:33,382 | INFO     | right removable region: 206
[2026-03-15 15:55:43] 2026-03-15 14:54:33,383 | INFO     | sum of square deviations: 2954447953.0
[2026-03-15 15:55:43] 2026-03-15 14:54:33,384 | INFO     | sum of deviations: -14876739566.500002
[2026-03-15 15:55:43] 2026-03-15 14:54:33,385 | INFO     | mean x: 1773580005.5
[2026-03-15 15:55:43] 2026-03-15 14:54:33,388 | INFO     | mean y: 2495594.400943396
[2026-03-15 15:55:43] 2026-03-15 14:54:33,388 | INFO     | intersect: 8933127733.438372
[2026-03-15 15:55:43] 2026-03-15 14:54:33,388 | INFO     | chi2: 0.8522107590963286
[2026-03-15 15:55:43] 2026-03-15 14:54:33,388 | INFO     | current chi2=0.8522107590963286 (change=67.9723442591189 %)
[2026-03-15 15:55:43] 2026-03-15 14:54:33,389 | INFO     | sum of square deviations: 2750295288.0
[2026-03-15 15:55:43] 2026-03-15 14:54:33,390 | INFO     | sum of deviations: -21034846367.0
[2026-03-15 15:55:43] 2026-03-15 14:54:33,391 | INFO     | mean x: 1773580158.0
[2026-03-15 15:55:43] 2026-03-15 14:54:33,391 | INFO     | mean y: 2500155.5555555555
[2026-03-15 15:55:43] 2026-03-15 14:54:33,391 | INFO     | intersect: 13567220389.730494
[2026-03-15 15:55:43] 2026-03-15 14:54:33,391 | INFO     | chi2: 0.8014690487743941
[2026-03-15 15:55:43] 2026-03-15 14:54:33,391 | INFO     | current chi2=0.8014690487743941 (change=5.954126931668907 %)
[2026-03-15 15:55:43] 2026-03-15 14:54:33,392 | INFO     | left removable region: 20
[2026-03-15 15:55:43] 2026-03-15 14:54:33,392 | INFO     | sum of square deviations: 1995283922.5
[2026-03-15 15:55:43] 2026-03-15 14:54:33,393 | INFO     | sum of deviations: -6090745507.0
[2026-03-15 15:55:43] 2026-03-15 14:54:33,393 | INFO     | mean x: 1773580127.5
[2026-03-15 15:55:43] 2026-03-15 14:54:33,394 | INFO     | mean y: 2510514.2473118277
[2026-03-15 15:55:43] 2026-03-15 14:54:33,394 | INFO     | intersect: 5416489482.8846
[2026-03-15 15:55:43] 2026-03-15 14:54:33,394 | INFO     | chi2: 0.010815202812618796
[2026-03-15 15:55:43] 2026-03-15 14:54:33,394 | INFO     | current memory leak: -3.05 B/s (using 186 data points, chi2=0.01)
[2026-03-15 15:55:43] 2026-03-15 14:54:33,398 | INFO     | could have reported an average CPU frequency of 1999 MHz (11 samples)
[2026-03-15 15:55:43] 2026-03-15 14:54:33,398 | INFO     | ..............................
[2026-03-15 15:55:43] 2026-03-15 14:54:33,398 | INFO     | . Timing measurements:
[2026-03-15 15:55:43] 2026-03-15 14:54:33,398 | INFO     | . get job = 0 s
[2026-03-15 15:55:43] 2026-03-15 14:54:33,398 | INFO     | . initial setup = 99 s
[2026-03-15 15:55:43] 2026-03-15 14:54:33,398 | INFO     | . payload setup = 135 s
[2026-03-15 15:55:43] 2026-03-15 14:54:33,399 | INFO     | . stage-in = 0 s
[2026-03-15 15:55:43] 2026-03-15 14:54:33,399 | INFO     | . payload execution = 13305 s
[2026-03-15 15:55:43] 2026-03-15 14:54:33,399 | INFO     | . stage-out = 3 s
[2026-03-15 15:55:43] 2026-03-15 14:54:33,399 | INFO     | . log creation = 1 s
[2026-03-15 15:55:43] 2026-03-15 14:54:33,399 | INFO     | ..............................
[2026-03-15 15:55:43] 2026-03-15 14:54:33,888 | INFO     | 
[2026-03-15 15:55:43] 2026-03-15 14:54:33,888 | INFO     | job summary report
[2026-03-15 15:55:43] 2026-03-15 14:54:33,888 | INFO     | --------------------------------------------------
[2026-03-15 15:55:43] 2026-03-15 14:54:33,888 | INFO     | PanDA job id: 7055691919
[2026-03-15 15:55:43] 2026-03-15 14:54:33,888 | INFO     | task id: 48955010
[2026-03-15 15:55:43] 2026-03-15 14:54:33,888 | INFO     | errors: (none)
[2026-03-15 15:55:43] 2026-03-15 14:54:33,889 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-15 15:55:43] 2026-03-15 14:54:33,889 | INFO     | pilot state: finished 
[2026-03-15 15:55:43] 2026-03-15 14:54:33,889 | INFO     | transexitcode: 0
[2026-03-15 15:55:43] 2026-03-15 14:54:33,889 | INFO     | exeerrorcode: 0
[2026-03-15 15:55:43] 2026-03-15 14:54:33,889 | INFO     | exeerrordiag: 
[2026-03-15 15:55:43] 2026-03-15 14:54:33,889 | INFO     | exitcode: 0
[2026-03-15 15:55:43] 2026-03-15 14:54:33,889 | INFO     | exitmsg: OK
[2026-03-15 15:55:43] 2026-03-15 14:54:33,889 | INFO     | cpuconsumptiontime: 50653 s
[2026-03-15 15:55:43] 2026-03-15 14:54:33,889 | INFO     | nevents: 400
[2026-03-15 15:55:43] 2026-03-15 14:54:33,889 | INFO     | neventsw: 0
[2026-03-15 15:55:43] 2026-03-15 14:54:33,889 | INFO     | pid: 12120
[2026-03-15 15:55:43] 2026-03-15 14:54:33,890 | INFO     | pgrp: 12120
[2026-03-15 15:55:43] 2026-03-15 14:54:33,890 | INFO     | corecount: 8
[2026-03-15 15:55:43] 2026-03-15 14:54:33,890 | INFO     | event service: False
[2026-03-15 15:55:43] 2026-03-15 14:54:33,890 | INFO     | sizes: {0: 2279039, 1: 2279724, 2: 2280185, 13: 2280185, 13444: 2310372, 13445: 2310371, 13450: 2319609, 13452: 2319747}
[2026-03-15 15:55:43] 2026-03-15 14:54:33,890 | INFO     | --------------------------------------------------
[2026-03-15 15:55:43] 2026-03-15 14:54:33,890 | INFO     | 
[2026-03-15 15:55:43] 2026-03-15 14:54:33,890 | INFO     | executing command: ls -lF /var/lib/boinc/slots/2
[2026-03-15 15:55:43] 2026-03-15 14:54:34,265 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-15 15:55:43] 2026-03-15 14:54:34,266 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-15 15:55:43] 2026-03-15 14:54:34,266 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-15 15:55:43] 2026-03-15 14:54:34,266 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-15 15:55:43] 2026-03-15 14:54:34,266 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-15 15:55:43] 2026-03-15 14:54:34,266 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-15 15:55:43] 2026-03-15 14:54:34,266 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-15 15:55:43] 2026-03-15 14:54:34,266 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-15 15:55:43] 2026-03-15 14:54:34,266 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-15 15:55:43] 2026-03-15 14:54:34,267 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-15 15:55:43] 2026-03-15 14:54:34,267 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-15 15:55:43] 2026-03-15 14:54:34,267 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-15 15:55:43] 2026-03-15 14:54:34,267 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-15 15:55:43] 2026-03-15 14:54:34,267 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-15 15:55:43] 2026-03-15 14:54:34,267 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-15 15:55:43] 2026-03-15 14:54:34,267 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-15 15:55:43] 2026-03-15 14:54:34,267 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-15 15:55:43] 2026-03-15 14:54:34,267 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-15 15:55:43] 2026-03-15 14:54:34,267 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-15 15:55:43] 2026-03-15 14:54:34,268 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-15 15:55:43] 2026-03-15 14:54:34,268 | INFO     | job 7055691919 has completed (purged errors)
[2026-03-15 15:55:43] 2026-03-15 14:54:34,268 | INFO     | overall cleanup function is called
[2026-03-15 15:55:43] 2026-03-15 14:54:34,500 | INFO     | PID=7628 has CPU usage=9.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-03-15 15:55:43] 2026-03-15 14:54:34,500 | INFO     | .. there are 9 such processes running
[2026-03-15 15:55:43] 2026-03-15 14:54:35,277 | INFO     | --- collectZombieJob: --- 10, [12120]
[2026-03-15 15:55:43] 2026-03-15 14:54:35,277 | INFO     | zombie collector waiting for pid 12120
[2026-03-15 15:55:43] 2026-03-15 14:54:35,277 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-15 15:55:43] 2026-03-15 14:54:35,277 | INFO     | collected zombie processes
[2026-03-15 15:55:43] 2026-03-15 14:54:35,277 | INFO     | will attempt to kill all subprocesses of pid=12120
[2026-03-15 15:55:43] 2026-03-15 14:54:35,384 | INFO     | process IDs to be killed: [12120] (in reverse order)
[2026-03-15 15:55:43] 2026-03-15 14:54:36,120 | WARNING  | found no corresponding commands to process id(s)
[2026-03-15 15:55:43] 2026-03-15 14:54:36,121 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-15 15:55:43] 2026-03-15 14:54:36,124 | INFO     | did not find any defunct processes belonging to 12120
[2026-03-15 15:55:43] 2026-03-15 14:54:36,126 | INFO     | did not find any defunct processes belonging to 12120
[2026-03-15 15:55:43] 2026-03-15 14:54:36,126 | INFO     | ready for new job
[2026-03-15 15:55:43] 2026-03-15 14:54:36,127 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-15 15:55:43] 2026-03-15 14:54:36,129 | INFO     | **************************************
[2026-03-15 15:55:43] 2026-03-15 14:54:36,129 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-15 15:55:43] 2026-03-15 14:54:36,129 | INFO     | **************************************
[2026-03-15 15:55:43] 2026-03-15 14:54:36,129 | INFO     | 
[2026-03-15 15:55:43] 2026-03-15 14:54:36,130 | INFO     | pilot is running in a VM
[2026-03-15 15:55:43] 2026-03-15 14:54:36,130 | INFO     | architecture information:
[2026-03-15 15:55:43] 2026-03-15 14:54:36,134 | INFO     | executing command: cat /etc/os-release
[2026-03-15 15:55:43] 2026-03-15 14:54:36,278 | INFO     | cat /etc/os-release:
[2026-03-15 15:55:43] NAME="CentOS Linux"
[2026-03-15 15:55:43] VERSION="7 (Core)"
[2026-03-15 15:55:43] ID="centos"
[2026-03-15 15:55:43] ID_LIKE="rhel fedora"
[2026-03-15 15:55:43] VERSION_ID="7"
[2026-03-15 15:55:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-15 15:55:43] ANSI_COLOR="0;31"
[2026-03-15 15:55:43] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-15 15:55:43] HOME_URL="https://www.centos.org/"
[2026-03-15 15:55:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-15 15:55:43] 
[2026-03-15 15:55:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-15 15:55:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-15 15:55:43] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-15 15:55:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-15 15:55:43] 
[2026-03-15 15:55:43] 2026-03-15 14:54:36,279 | INFO     | **************************************
[2026-03-15 15:55:43] 2026-03-15 14:54:36,782 | INFO     | executing command: df -mP /var/lib/boinc/slots/2
[2026-03-15 15:55:43] 2026-03-15 14:54:37,104 | INFO     | sufficient remaining disk space (494963523584 B)
[2026-03-15 15:55:43] 2026-03-15 14:54:37,104 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-15 15:55:43] 2026-03-15 14:54:37,104 | INFO     | current server update state: UPDATING_FINAL
[2026-03-15 15:55:43] 2026-03-15 14:54:37,104 | INFO     | update_server=False
[2026-03-15 15:55:43] 2026-03-15 14:54:37,104 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-15 15:55:43] 2026-03-15 14:54:37,105 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-15 15:55:43] 2026-03-15 14:54:37,105 | INFO     | aborting loop
[2026-03-15 15:55:43] 2026-03-15 14:54:37,105 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-15 15:55:43] 2026-03-15 14:54:37,180 | INFO     | all data control threads have been joined
[2026-03-15 15:55:43] 2026-03-15 14:54:37,657 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-15 15:55:43] 2026-03-15 14:54:37,969 | INFO     | all payload control threads have been joined
[2026-03-15 15:55:43] 2026-03-15 14:54:38,110 | INFO     | [job] retrieve thread has finished
[2026-03-15 15:55:43] 2026-03-15 14:54:38,111 | INFO     | [job] job monitor thread has finished
[2026-03-15 15:55:43] 2026-03-15 14:54:38,186 | INFO     | [data] control thread has finished
[2026-03-15 15:55:43] 2026-03-15 14:54:38,479 | INFO     | all job control threads have been joined
[2026-03-15 15:55:43] 2026-03-15 14:54:38,558 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-15 15:55:43] 2026-03-15 14:54:38,572 | INFO     | [payload] validate_post thread has finished
[2026-03-15 15:55:43] 2026-03-15 14:54:38,613 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-15 15:55:43] 2026-03-15 14:54:38,697 | INFO     | [payload] validate_pre thread has finished
[2026-03-15 15:55:43] 2026-03-15 14:54:38,966 | INFO     | [job] create_data_payload thread has finished
[2026-03-15 15:55:43] 2026-03-15 14:54:38,972 | INFO     | [data] copytool_in thread has finished
[2026-03-15 15:55:43] 2026-03-15 14:54:38,975 | INFO     | [payload] control thread has finished
[2026-03-15 15:55:43] 2026-03-15 14:54:39,013 | INFO     | [payload] execute_payloads thread has finished
[2026-03-15 15:55:43] 2026-03-15 14:54:39,070 | INFO     | [job] validate thread has finished
[2026-03-15 15:55:43] 2026-03-15 14:54:39,112 | INFO     | [data] copytool_out thread has finished
[2026-03-15 15:55:43] 2026-03-15 14:54:39,486 | INFO     | [job] control thread has finished
[2026-03-15 15:55:43] 2026-03-15 14:54:39,538 | INFO     | [payload] failed_post thread has finished
[2026-03-15 15:55:43] 2026-03-15 14:54:39,564 | INFO     | [job] queue monitor thread has finished
[2026-03-15 15:55:43] 2026-03-15 14:54:41,669 | INFO     | [data] queue_monitor thread has finished
[2026-03-15 15:55:43] 2026-03-15 14:55:06,670 | INFO     | PID=7628 has CPU usage=0.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-03-15 15:55:43] 2026-03-15 14:55:06,670 | INFO     | .. there are 9 such processes running
[2026-03-15 15:55:43] 2026-03-15 14:55:06,671 | INFO     | found 0 job(s) in 20 queues
[2026-03-15 15:55:43] 2026-03-15 14:55:06,671 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-15 15:55:43] 2026-03-15 14:55:06,671 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-15 15:55:43] 2026-03-15 14:55:30,987 | INFO     | [monitor] cgroup control has ended
[2026-03-15 15:55:43] 2026-03-15 14:55:33,023 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140359122528064)>', '<ExcThread(monitor, started 140358818178816)>']
[2026-03-15 15:55:43] 2026-03-15 14:55:33,830 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-15 15:55:43] 2026-03-15 14:55:33,830 | INFO     | [monitor] control thread has ended
[2026-03-15 15:55:43] 2026-03-15 14:55:38,049 | INFO     | all workflow threads have been joined
[2026-03-15 15:55:43] 2026-03-15 14:55:38,049 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-15 15:55:43] 2026-03-15 14:55:38,049 | INFO     | traces error code: 0
[2026-03-15 15:55:43] 2026-03-15 14:55:38,050 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-15 15:55:43] 2026-03-15 14:55:38,409 [wrapper] ==== pilot stdout END ====
[2026-03-15 15:55:43] 2026-03-15 14:55:38,508 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-15 15:55:43] 2026-03-15 14:55:38,607 [wrapper] pilotpid: 7628
[2026-03-15 15:55:43] 2026-03-15 14:55:38,733 [wrapper] Pilot exit status: 0
[2026-03-15 15:55:43] 2026-03-15 14:55:39,169 [wrapper] pandaids: 7055691919
[2026-03-15 15:55:43] 2026-03-15 14:55:40,108 [wrapper] cleanup supervisor_pilot 18467 7629
[2026-03-15 15:55:43] 2026-03-15 14:55:40,112 [wrapper] Test setup, not cleaning
[2026-03-15 15:55:43] 2026-03-15 14:55:40,122 [wrapper] apfmon messages muted
[2026-03-15 15:55:43] 2026-03-15 14:55:40,176 [wrapper] ==== wrapper stdout END ====
[2026-03-15 15:55:43] 2026-03-15 14:55:40,267 [wrapper] ==== wrapper stderr END ====
[2026-03-15 15:55:43]  *** Error codes and diagnostics ***
[2026-03-15 15:55:43]     "exeErrorCode": 0,
[2026-03-15 15:55:43]     "exeErrorDiag": "",
[2026-03-15 15:55:43]     "pilotErrorCode": 0,
[2026-03-15 15:55:43]     "pilotErrorDiag": "",
[2026-03-15 15:55:43]  *** Listing of results directory ***
[2026-03-15 15:55:43] total 621872
[2026-03-15 15:55:43] -rwx------. 1 boinc boinc     36322 Mar 15 09:35 runpilot2-wrapper.sh
[2026-03-15 15:55:43] -rw-r--r--. 1 boinc boinc    585013 Mar 15 09:35 pilot3.tar.gz
[2026-03-15 15:55:43] -rw-r--r--. 1 boinc boinc      5111 Mar 15 09:35 queuedata.json
[2026-03-15 15:55:43] -rw-r--r--. 1 boinc boinc       100 Mar 15 12:04 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-15 15:55:43] -rwxr-xr-x. 1 boinc boinc      7986 Mar 15 12:04 run_atlas
[2026-03-15 15:55:43] -rw-r--r--. 1 boinc boinc       105 Mar 15 12:04 job.xml
[2026-03-15 15:55:43] -rw-r--r--. 1 boinc boinc      6390 Mar 15 12:04 init_data.xml
[2026-03-15 15:55:43] -rw-r--r--. 2 boinc boinc 443795816 Mar 15 12:04 EVNT.46701403._002009.pool.root.1
[2026-03-15 15:55:43] -rw-r--r--. 2 boinc boinc     15845 Mar 15 12:04 start_atlas.sh
[2026-03-15 15:55:43] drwxrwx--x. 2 boinc boinc        68 Mar 15 12:04 shared
[2026-03-15 15:55:43] -rw-r--r--. 2 boinc boinc    597523 Mar 15 12:04 input.tar.gz
[2026-03-15 15:55:43] -rw-r--r--. 1 boinc boinc         0 Mar 15 12:04 boinc_lockfile
[2026-03-15 15:55:43] -rw-r--r--. 1 boinc boinc      2562 Mar 15 12:04 pandaJob.out
[2026-03-15 15:55:43] -rw-------. 1 boinc boinc       415 Mar 15 12:10 workernode_map.json
[2026-03-15 15:55:43] -rw-------. 1 boinc boinc   1006481 Mar 15 12:10 agis_schedconf.cvmfs.json
[2026-03-15 15:55:43] drwx------. 5 boinc boinc      4096 Mar 15 12:10 pilot3
[2026-03-15 15:55:43] -rw-------. 1 boinc boinc 184347372 Mar 15 15:53 HITS.48955010._052475.pool.root.1
[2026-03-15 15:55:43] -rw-r--r--. 1 boinc boinc       532 Mar 15 15:53 boinc_task_state.xml
[2026-03-15 15:55:43] -rw-------. 1 boinc boinc      1018 Mar 15 15:54 memory_monitor_summary.json
[2026-03-15 15:55:43] -rw-------. 1 boinc boinc   1511579 Mar 15 15:54 agis_ddmendpoints.agis.ALL.json
[2026-03-15 15:55:43] -rw-------. 1 boinc boinc    482625 Mar 15 15:54 log.48955010._052475.job.log.tgz.1
[2026-03-15 15:55:43] -rw-------. 1 boinc boinc      6330 Mar 15 15:54 heartbeat.json
[2026-03-15 15:55:43] -rw-------. 1 boinc boinc        95 Mar 15 15:55 pilot_heartbeat.json
[2026-03-15 15:55:43] -rw-------. 1 boinc boinc      4879 Mar 15 15:55 pilotlog.txt
[2026-03-15 15:55:43] -rw-------. 1 boinc boinc   1881726 Mar 15 15:55 log.48955010._052475.job.log.1
[2026-03-15 15:55:43] -rw-r--r--. 1 boinc boinc      8192 Mar 15 15:55 boinc_mmap_file
[2026-03-15 15:55:43] -rw-r--r--. 1 boinc boinc        28 Mar 15 15:55 wrapper_checkpoint.txt
[2026-03-15 15:55:43] -rw-------. 1 boinc boinc       357 Mar 15 15:55 output.list
[2026-03-15 15:55:43] -rw-r--r--. 1 boinc boinc       620 Mar 15 15:55 runtime_log
[2026-03-15 15:55:43] -rw-------. 1 boinc boinc   2385920 Mar 15 15:55 result.tar.gz
[2026-03-15 15:55:43] -rw-r--r--. 1 boinc boinc      8816 Mar 15 15:55 runtime_log.err
[2026-03-15 15:55:43] -rw-------. 1 boinc boinc       656 Mar 15 15:55 5wSLDms7vL9n9Rq4apOajLDm4fhM0noT9bVooX4SDm85rLDmY58HTn.diag
[2026-03-15 15:55:43] -rw-r--r--. 1 boinc boinc     20804 Mar 15 15:55 stderr.txt
[2026-03-15 15:55:43] HITS file was successfully produced:
[2026-03-15 15:55:43] -rw-------. 1 boinc boinc 184347372 Mar 15 15:53 shared/HITS.pool.root.1
[2026-03-15 15:55:43]  *** Contents of shared directory: ***
[2026-03-15 15:55:43] total 616356
[2026-03-15 15:55:43] -rw-r--r--. 2 boinc boinc 443795816 Mar 15 12:04 ATLAS.root_0
[2026-03-15 15:55:43] -rw-r--r--. 2 boinc boinc     15845 Mar 15 12:04 start_atlas.sh
[2026-03-15 15:55:43] -rw-r--r--. 2 boinc boinc    597523 Mar 15 12:04 input.tar.gz
[2026-03-15 15:55:43] -rw-------. 1 boinc boinc 184347372 Mar 15 15:53 HITS.pool.root.1
[2026-03-15 15:55:43] -rw-------. 1 boinc boinc   2385920 Mar 15 15:55 result.tar.gz
15:55:44 (3527): run_atlas exited; CPU time 50846.435508
15:55:44 (3527): called boinc_finish(0)

</stderr_txt>
]]>

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