Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:59:52 (830817): wrapper (7.7.26015): starting
05:59:52 (830817): wrapper: running run_atlas (--nthreads 4)
[2026-03-16 05:59:52] Arguments: --nthreads 4
[2026-03-16 05:59:52] Threads: 4
[2026-03-16 05:59:52] Checking for CVMFS
[2026-03-16 05:59:52] No cvmfs_config command found, will try listing directly
[2026-03-16 05:59:52] CVMFS is ok
[2026-03-16 05:59:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-16 05:59:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-16 05:59:52] Further information can be found at the LHC@home message board.
[2026-03-16 05:59:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-16 05:59:52] Checking for apptainer binary...
[2026-03-16 05:59:52] which: no apptainer in ((null))
[2026-03-16 05:59:52] apptainer is not installed, using version from CVMFS
[2026-03-16 05:59:52] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-16 05:59:52] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot108/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut26.grid.cesnet.cz
[2026-03-16 05:59:52] apptainer works
[2026-03-16 05:59:52] Set ATHENA_PROC_NUMBER=4
[2026-03-16 05:59:52] Set ATHENA_CORE_NUMBER=4
[2026-03-16 05:59:52] Starting ATLAS job with PandaID=7055665046
[2026-03-16 05:59:52] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot108/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-16 07:18:14]  *** The last 200 lines of the pilot log: ***
[2026-03-16 07:18:14]  filesize=273990
[2026-03-16 07:18:14]  filetype=log
[2026-03-16 07:18:14]  guid=aa45e000-a0c5-4cd0-82c7-b7829578dd84
[2026-03-16 07:18:14]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-16 07:18:14]  is_altstaged=None
[2026-03-16 07:18:14]  is_tar=False
[2026-03-16 07:18:14]  lfn=log.48967094._009392.job.log.tgz.1
[2026-03-16 07:18:14]  mtime=0
[2026-03-16 07:18:14]  protocol_id=None
[2026-03-16 07:18:14]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-16 07:18:14]  replicas=None
[2026-03-16 07:18:14]  scope=mc23_13p6TeV
[2026-03-16 07:18:14]  status=None
[2026-03-16 07:18:14]  status_code=0
[2026-03-16 07:18:14]  storage_token=
[2026-03-16 07:18:14]  surl=/var/lib/boinc/var/slot108/slots/1/PanDA_Pilot-7055665046/log.48967094._009392.job.log.tgz.1
[2026-03-16 07:18:14]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/23/52/log.48967094._009392.job.log.tgz.1
[2026-03-16 07:18:14]  workdir=None
[2026-03-16 07:18:14] ]
[2026-03-16 07:18:14] 2026-03-16 06:17:17,128 | INFO     | transferring file log.48967094._009392.job.log.tgz.1 from /var/lib/boinc/var/slot108/slots/1/PanDA_Pilot-7055665046/log.48967094._009392.job.log.tgz.1 to /var/lib/
[2026-03-16 07:18:14] 2026-03-16 06:17:17,128 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot108/slots/1/PanDA_Pilot-7055665046/log.48967094._009392.job.log.tgz.1 /var/lib/boinc/var/slot108/slots/1/
[2026-03-16 07:18:14] 2026-03-16 06:17:17,143 | INFO     | adding to output.list: log.48967094._009392.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/23/52/log.48967094._009392.job.log.tg
[2026-03-16 07:18:14] 2026-03-16 06:17:17,143 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-16 07:18:14] 2026-03-16 06:17:17,143 | INFO     | summary of transferred files:
[2026-03-16 07:18:14] 2026-03-16 06:17:17,143 | INFO     |  -- lfn=log.48967094._009392.job.log.tgz.1, status_code=0, status=transferred
[2026-03-16 07:18:14] 2026-03-16 06:17:17,144 | INFO     | stage-out finished correctly
[2026-03-16 07:18:14] 2026-03-16 06:17:18,469 | INFO     | monitor loop #341: job 0:7055665046 is in state 'finished'
[2026-03-16 07:18:14] 2026-03-16 06:17:18,470 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-16 07:18:14] 2026-03-16 06:17:18,648 | INFO     | time since job start (4635s) is within the limit (345600.0s)
[2026-03-16 07:18:14] 2026-03-16 06:17:18,858 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-16 07:18:14] 2026-03-16 06:17:19,549 | INFO     | job 7055665046 has state=finished
[2026-03-16 07:18:14] 2026-03-16 06:17:19,549 | INFO     | preparing for final server update for job 7055665046 in state='finished'
[2026-03-16 07:18:14] 2026-03-16 06:17:19,549 | INFO     | reading metadata from: /var/lib/boinc/var/slot108/slots/1/PanDA_Pilot-7055665046/jobReport.json
[2026-03-16 07:18:14] 2026-03-16 06:17:19,551 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot108/slots/1/workernode_map.json
[2026-03-16 07:18:14] 2026-03-16 06:17:19,551 | INFO     | this job has now completed (state=finished)
[2026-03-16 07:18:14] 2026-03-16 06:17:19,551 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-16 07:18:14] 2026-03-16 06:17:19,551 | INFO     | log transfer has been attempted: DONE
[2026-03-16 07:18:14] 2026-03-16 06:17:19,551 | INFO     | job 7055665046 has finished - writing final server update
[2026-03-16 07:18:14] 2026-03-16 06:17:19,551 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_3913135/.job.ad'
[2026-03-16 07:18:14] 2026-03-16 06:17:19,551 | INFO     | total number of processed events: 400 (read)
[2026-03-16 07:18:14] 2026-03-16 06:17:19,569 | INFO     | using path: /var/lib/boinc/var/slot108/slots/1/PanDA_Pilot-7055665046/memory_monitor_summary.json (trf name=prmon)
[2026-03-16 07:18:14] 2026-03-16 06:17:19,569 | INFO     | extracted standard info from prmon json
[2026-03-16 07:18:14] 2026-03-16 06:17:19,569 | INFO     | extracted standard memory fields from prmon json
[2026-03-16 07:18:14] 2026-03-16 06:17:19,569 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-16 07:18:14] 2026-03-16 06:17:19,569 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-16 07:18:14] 2026-03-16 06:17:19,569 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-16 07:18:14] 2026-03-16 06:17:19,571 | INFO     | fitting pss+swap vs Time
[2026-03-16 07:18:14] 2026-03-16 06:17:19,571 | INFO     | sum of square deviations: 101843770.0
[2026-03-16 07:18:14] 2026-03-16 06:17:19,571 | INFO     | sum of deviations: 465018066.99999994
[2026-03-16 07:18:14] 2026-03-16 06:17:19,571 | INFO     | mean x: 1773639601.0
[2026-03-16 07:18:14] 2026-03-16 06:17:19,571 | INFO     | mean y: 2330277.217391304
[2026-03-16 07:18:14] 2026-03-16 06:17:19,571 | INFO     | intersect: -8096097921.3034525
[2026-03-16 07:18:14] 2026-03-16 06:17:19,571 | INFO     | chi2: 0.0003416823524285114
[2026-03-16 07:18:14] 2026-03-16 06:17:19,571 | INFO     | current memory leak: 4.57 B/s (using 69 data points, chi2=0.00)
[2026-03-16 07:18:14] 2026-03-16 06:17:19,571 | INFO     | could have reported an average CPU frequency of 3672 MHz (6 samples)
[2026-03-16 07:18:14] 2026-03-16 06:17:19,571 | INFO     | ..............................
[2026-03-16 07:18:14] 2026-03-16 06:17:19,571 | INFO     | . Timing measurements:
[2026-03-16 07:18:14] 2026-03-16 06:17:19,571 | INFO     | . get job = 0 s
[2026-03-16 07:18:14] 2026-03-16 06:17:19,572 | INFO     | . initial setup = 4 s
[2026-03-16 07:18:14] 2026-03-16 06:17:19,572 | INFO     | . payload setup = 4 s
[2026-03-16 07:18:14] 2026-03-16 06:17:19,572 | INFO     | . stage-in = 0 s
[2026-03-16 07:18:14] 2026-03-16 06:17:19,572 | INFO     | . payload execution = 4613 s
[2026-03-16 07:18:14] 2026-03-16 06:17:19,572 | INFO     | . stage-out = 0 s
[2026-03-16 07:18:14] 2026-03-16 06:17:19,572 | INFO     | . log creation = 0 s
[2026-03-16 07:18:14] 2026-03-16 06:17:19,572 | INFO     | ..............................
[2026-03-16 07:18:14] 2026-03-16 06:17:19,620 | INFO     | 
[2026-03-16 07:18:14] 2026-03-16 06:17:19,621 | INFO     | job summary report
[2026-03-16 07:18:14] 2026-03-16 06:17:19,621 | INFO     | --------------------------------------------------
[2026-03-16 07:18:14] 2026-03-16 06:17:19,621 | INFO     | PanDA job id: 7055665046
[2026-03-16 07:18:14] 2026-03-16 06:17:19,621 | INFO     | task id: 48967094
[2026-03-16 07:18:14] 2026-03-16 06:17:19,621 | INFO     | errors: (none)
[2026-03-16 07:18:14] 2026-03-16 06:17:19,621 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-16 07:18:14] 2026-03-16 06:17:19,621 | INFO     | pilot state: finished 
[2026-03-16 07:18:14] 2026-03-16 06:17:19,621 | INFO     | transexitcode: 0
[2026-03-16 07:18:14] 2026-03-16 06:17:19,621 | INFO     | exeerrorcode: 0
[2026-03-16 07:18:14] 2026-03-16 06:17:19,621 | INFO     | exeerrordiag: 
[2026-03-16 07:18:14] 2026-03-16 06:17:19,621 | INFO     | exitcode: 0
[2026-03-16 07:18:14] 2026-03-16 06:17:19,621 | INFO     | exitmsg: OK
[2026-03-16 07:18:14] 2026-03-16 06:17:19,621 | INFO     | cpuconsumptiontime: 17833 s
[2026-03-16 07:18:14] 2026-03-16 06:17:19,621 | INFO     | nevents: 400
[2026-03-16 07:18:14] 2026-03-16 06:17:19,621 | INFO     | neventsw: 0
[2026-03-16 07:18:14] 2026-03-16 06:17:19,621 | INFO     | pid: 842359
[2026-03-16 07:18:14] 2026-03-16 06:17:19,621 | INFO     | pgrp: 842359
[2026-03-16 07:18:14] 2026-03-16 06:17:19,621 | INFO     | corecount: 4
[2026-03-16 07:18:14] 2026-03-16 06:17:19,621 | INFO     | event service: False
[2026-03-16 07:18:14] 2026-03-16 06:17:19,621 | INFO     | sizes: {0: 2280238, 11: 2280238, 4621: 2306457, 4623: 2315507, 4625: 2315757}
[2026-03-16 07:18:14] 2026-03-16 06:17:19,621 | INFO     | --------------------------------------------------
[2026-03-16 07:18:14] 2026-03-16 06:17:19,621 | INFO     | 
[2026-03-16 07:18:14] 2026-03-16 06:17:19,621 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot108/slots/1
[2026-03-16 07:18:14] 2026-03-16 06:17:19,636 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-16 07:18:14] 2026-03-16 06:17:19,636 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-16 07:18:14] 2026-03-16 06:17:19,637 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-16 07:18:14] 2026-03-16 06:17:19,637 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-16 07:18:14] 2026-03-16 06:17:19,637 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-16 07:18:14] 2026-03-16 06:17:19,637 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-16 07:18:14] 2026-03-16 06:17:19,637 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-16 07:18:14] 2026-03-16 06:17:19,637 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-16 07:18:14] 2026-03-16 06:17:19,637 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-16 07:18:14] 2026-03-16 06:17:19,637 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-16 07:18:14] 2026-03-16 06:17:19,637 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-16 07:18:14] 2026-03-16 06:17:19,637 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-16 07:18:14] 2026-03-16 06:17:19,637 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-16 07:18:14] 2026-03-16 06:17:19,637 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-16 07:18:14] 2026-03-16 06:17:19,637 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-16 07:18:14] 2026-03-16 06:17:19,637 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-16 07:18:14] 2026-03-16 06:17:19,637 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-16 07:18:14] 2026-03-16 06:17:19,637 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-16 07:18:14] 2026-03-16 06:17:19,637 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-16 07:18:14] 2026-03-16 06:17:19,637 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-16 07:18:14] 2026-03-16 06:17:19,637 | INFO     | job 7055665046 has completed (purged errors)
[2026-03-16 07:18:14] 2026-03-16 06:17:19,637 | INFO     | overall cleanup function is called
[2026-03-16 07:18:14] 2026-03-16 06:17:20,644 | INFO     | --- collectZombieJob: --- 10, [842359]
[2026-03-16 07:18:14] 2026-03-16 06:17:20,644 | INFO     | zombie collector waiting for pid 842359
[2026-03-16 07:18:14] 2026-03-16 06:17:20,644 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-16 07:18:14] 2026-03-16 06:17:20,644 | INFO     | collected zombie processes
[2026-03-16 07:18:14] 2026-03-16 06:17:20,645 | INFO     | will attempt to kill all subprocesses of pid=842359
[2026-03-16 07:18:14] 2026-03-16 06:17:20,994 | INFO     | process IDs to be killed: [842359] (in reverse order)
[2026-03-16 07:18:14] 2026-03-16 06:17:21,160 | WARNING  | found no corresponding commands to process id(s)
[2026-03-16 07:18:14] 2026-03-16 06:17:21,160 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-16 07:18:14] 2026-03-16 06:17:21,187 | INFO     | did not find any defunct processes belonging to 842359
[2026-03-16 07:18:14] 2026-03-16 06:17:21,211 | INFO     | did not find any defunct processes belonging to 842359
[2026-03-16 07:18:14] 2026-03-16 06:17:21,212 | INFO     | ready for new job
[2026-03-16 07:18:14] 2026-03-16 06:17:21,212 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-16 07:18:14] 2026-03-16 06:17:21,213 | INFO     | **************************************
[2026-03-16 07:18:14] 2026-03-16 06:17:21,213 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-16 07:18:14] 2026-03-16 06:17:21,213 | INFO     | **************************************
[2026-03-16 07:18:14] 2026-03-16 06:17:21,213 | INFO     | 
[2026-03-16 07:18:14] 2026-03-16 06:17:21,218 | INFO     | architecture information:
[2026-03-16 07:18:14] 2026-03-16 06:17:21,218 | INFO     | executing command: cat /etc/os-release
[2026-03-16 07:18:14] 2026-03-16 06:17:21,230 | INFO     | cat /etc/os-release:
[2026-03-16 07:18:14] NAME="CentOS Linux"
[2026-03-16 07:18:14] VERSION="7 (Core)"
[2026-03-16 07:18:14] ID="centos"
[2026-03-16 07:18:14] ID_LIKE="rhel fedora"
[2026-03-16 07:18:14] VERSION_ID="7"
[2026-03-16 07:18:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-16 07:18:14] ANSI_COLOR="0;31"
[2026-03-16 07:18:14] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-16 07:18:14] HOME_URL="https://www.centos.org/"
[2026-03-16 07:18:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-16 07:18:14] 
[2026-03-16 07:18:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-16 07:18:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-16 07:18:14] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-16 07:18:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-16 07:18:14] 
[2026-03-16 07:18:14] 2026-03-16 06:17:21,230 | INFO     | **************************************
[2026-03-16 07:18:14] 2026-03-16 06:17:21,733 | INFO     | executing command: df -mP /var/lib/boinc/var/slot108/slots/1
[2026-03-16 07:18:14] 2026-03-16 06:17:21,749 | INFO     | sufficient remaining disk space (256234225664 B)
[2026-03-16 07:18:14] 2026-03-16 06:17:21,749 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-16 07:18:14] 2026-03-16 06:17:21,749 | INFO     | current server update state: UPDATING_FINAL
[2026-03-16 07:18:14] 2026-03-16 06:17:21,749 | INFO     | update_server=False
[2026-03-16 07:18:14] 2026-03-16 06:17:21,749 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-16 07:18:14] 2026-03-16 06:17:21,978 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-16 07:18:14] 2026-03-16 06:17:21,978 | INFO     | aborting loop
[2026-03-16 07:18:14] 2026-03-16 06:17:22,025 | INFO     | all payload control threads have been joined
[2026-03-16 07:18:14] 2026-03-16 06:17:22,240 | INFO     | all job control threads have been joined
[2026-03-16 07:18:14] 2026-03-16 06:17:22,525 | INFO     | all data control threads have been joined
[2026-03-16 07:18:14] 2026-03-16 06:17:22,696 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-16 07:18:14] 2026-03-16 06:17:22,754 | INFO     | [job] retrieve thread has finished
[2026-03-16 07:18:14] 2026-03-16 06:17:22,803 | INFO     | [job] validate thread has finished
[2026-03-16 07:18:14] 2026-03-16 06:17:22,947 | INFO     | [job] create_data_payload thread has finished
[2026-03-16 07:18:14] 2026-03-16 06:17:22,976 | INFO     | [payload] validate_pre thread has finished
[2026-03-16 07:18:14] 2026-03-16 06:17:22,983 | INFO     | [job] job monitor thread has finished
[2026-03-16 07:18:14] 2026-03-16 06:17:23,028 | INFO     | [payload] control thread has finished
[2026-03-16 07:18:14] 2026-03-16 06:17:23,044 | INFO     | [payload] failed_post thread has finished
[2026-03-16 07:18:14] 2026-03-16 06:17:23,201 | INFO     | [data] copytool_in thread has finished
[2026-03-16 07:18:14] 2026-03-16 06:17:23,246 | INFO     | [job] control thread has finished
[2026-03-16 07:18:14] 2026-03-16 06:17:23,531 | INFO     | [data] control thread has finished
[2026-03-16 07:18:14] 2026-03-16 06:17:23,791 | INFO     | [payload] execute_payloads thread has finished
[2026-03-16 07:18:14] 2026-03-16 06:17:23,964 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-16 07:18:14] 2026-03-16 06:17:24,346 | INFO     | [payload] validate_post thread has finished
[2026-03-16 07:18:14] 2026-03-16 06:17:24,631 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-16 07:18:14] 2026-03-16 06:17:24,702 | INFO     | [data] copytool_out thread has finished
[2026-03-16 07:18:14] 2026-03-16 06:17:24,907 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-16 07:18:14] 2026-03-16 06:17:25,637 | INFO     | [job] queue monitor thread has finished
[2026-03-16 07:18:14] 2026-03-16 06:17:28,913 | INFO     | [data] queue_monitor thread has finished
[2026-03-16 07:18:14] 2026-03-16 06:17:52,191 | INFO     | PID=835725 has CPU usage=5.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-16 07:18:14] 2026-03-16 06:17:52,191 | INFO     | .. there are 25 such processes running
[2026-03-16 07:18:14] 2026-03-16 06:17:52,192 | INFO     | found 0 job(s) in 20 queues
[2026-03-16 07:18:14] 2026-03-16 06:17:52,192 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-16 07:18:14] 2026-03-16 06:17:52,192 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-16 07:18:14] 2026-03-16 06:18:09,397 | INFO     | [monitor] cgroup control has ended
[2026-03-16 07:18:14] 2026-03-16 06:18:09,539 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22846771316544)>', '<ExcThread(monitor, started 22846464042752)>']
[2026-03-16 07:18:14] 2026-03-16 06:18:10,276 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-16 07:18:14] 2026-03-16 06:18:10,276 | INFO     | [monitor] control thread has ended
[2026-03-16 07:18:14] 2026-03-16 06:18:14,564 | INFO     | all workflow threads have been joined
[2026-03-16 07:18:14] 2026-03-16 06:18:14,565 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-16 07:18:14] 2026-03-16 06:18:14,565 | INFO     | traces error code: 0
[2026-03-16 07:18:14] 2026-03-16 06:18:14,565 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-16 07:18:14] 2026-03-16 06:18:14,730 [wrapper] ==== pilot stdout END ====
[2026-03-16 07:18:14] 2026-03-16 06:18:14,732 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-16 07:18:14] 2026-03-16 06:18:14,733 [wrapper] pilotpid: 835725
[2026-03-16 07:18:14] 2026-03-16 06:18:14,735 [wrapper] Pilot exit status: 0
[2026-03-16 07:18:14] 2026-03-16 06:18:14,742 [wrapper] pandaids: 7055665046
[2026-03-16 07:18:14] 2026-03-16 06:18:14,847 [wrapper] cleanup supervisor_pilot 1204882 835726
[2026-03-16 07:18:14] 2026-03-16 06:18:14,849 [wrapper] Test setup, not cleaning
[2026-03-16 07:18:14] 2026-03-16 06:18:14,851 [wrapper] apfmon messages muted
[2026-03-16 07:18:14] 2026-03-16 06:18:14,852 [wrapper] ==== wrapper stdout END ====
[2026-03-16 07:18:14] 2026-03-16 06:18:14,853 [wrapper] ==== wrapper stderr END ====
[2026-03-16 07:18:14]  *** Error codes and diagnostics ***
[2026-03-16 07:18:14]     "exeErrorCode": 0,
[2026-03-16 07:18:14]     "exeErrorDiag": "",
[2026-03-16 07:18:14]     "pilotErrorCode": 0,
[2026-03-16 07:18:14]     "pilotErrorDiag": "",
[2026-03-16 07:18:14]  *** Listing of results directory ***
[2026-03-16 07:18:14] total 420328
[2026-03-16 07:18:14] -rw-r--r--. 1 boinc boinc    585013 Mar 15 08:54 pilot3.tar.gz
[2026-03-16 07:18:14] -rwx------. 1 boinc boinc     36322 Mar 15 08:55 runpilot2-wrapper.sh
[2026-03-16 07:18:14] -rw-r--r--. 1 boinc boinc      5111 Mar 15 08:56 queuedata.json
[2026-03-16 07:18:14] -rw-r--r--. 1 boinc boinc       100 Mar 16 05:59 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-16 07:18:14] -rwxr-xr-x. 1 boinc boinc      7986 Mar 16 05:59 run_atlas
[2026-03-16 07:18:14] -rw-r--r--. 1 boinc boinc       105 Mar 16 05:59 job.xml
[2026-03-16 07:18:14] -rw-r--r--. 2 boinc boinc 219437319 Mar 16 05:59 EVNT.48967092._000391.pool.root.1
[2026-03-16 07:18:14] -rw-r--r--. 2 boinc boinc     15845 Mar 16 05:59 start_atlas.sh
[2026-03-16 07:18:14] drwxrwx--x. 2 boinc boinc      4096 Mar 16 05:59 shared
[2026-03-16 07:18:14] -rw-r--r--. 2 boinc boinc    597532 Mar 16 05:59 input.tar.gz
[2026-03-16 07:18:14] -rw-r--r--. 1 boinc boinc      6710 Mar 16 05:59 init_data.xml
[2026-03-16 07:18:14] -rw-r--r--. 1 boinc boinc         0 Mar 16 05:59 boinc_lockfile
[2026-03-16 07:18:14] -rw-r--r--. 1 boinc boinc      2599 Mar 16 05:59 pandaJob.out
[2026-03-16 07:18:14] -rw-------. 1 boinc boinc   1006471 Mar 16 05:59 agis_schedconf.cvmfs.json
[2026-03-16 07:18:14] -rw-------. 1 boinc boinc   1511579 Mar 16 05:59 agis_ddmendpoints.agis.ALL.json
[2026-03-16 07:18:14] -rw-------. 1 boinc boinc       436 Mar 16 06:00 workernode_map.json
[2026-03-16 07:18:14] drwx------. 5 boinc boinc      4096 Mar 16 06:00 pilot3
[2026-03-16 07:18:14] -rw-r--r--. 1 boinc boinc       529 Mar 16 07:16 boinc_task_state.xml
[2026-03-16 07:18:14] -rw-------. 1 boinc boinc 205128755 Mar 16 07:16 HITS.48967094._009392.pool.root.1
[2026-03-16 07:18:14] -rw-------. 1 boinc boinc      1027 Mar 16 07:17 memory_monitor_summary.json
[2026-03-16 07:18:14] -rw-------. 1 boinc boinc    273990 Mar 16 07:17 log.48967094._009392.job.log.tgz.1
[2026-03-16 07:18:14] -rw-------. 1 boinc boinc      6338 Mar 16 07:17 heartbeat.json
[2026-03-16 07:18:14] -rw-r--r--. 1 boinc boinc      8192 Mar 16 07:17 boinc_mmap_file
[2026-03-16 07:18:14] -rw-r--r--. 1 boinc boinc        27 Mar 16 07:17 wrapper_checkpoint.txt
[2026-03-16 07:18:14] -rw-------. 1 boinc boinc        95 Mar 16 07:17 pilot_heartbeat.json
[2026-03-16 07:18:14] -rw-------. 1 boinc boinc      4830 Mar 16 07:18 pilotlog.txt
[2026-03-16 07:18:14] -rw-------. 1 boinc boinc    685455 Mar 16 07:18 log.48967094._009392.job.log.1
[2026-03-16 07:18:14] -rw-------. 1 boinc boinc       357 Mar 16 07:18 output.list
[2026-03-16 07:18:14] -rw-r--r--. 1 boinc boinc       620 Mar 16 07:18 runtime_log
[2026-03-16 07:18:14] -rw-------. 1 boinc boinc    972800 Mar 16 07:18 result.tar.gz
[2026-03-16 07:18:14] -rw-r--r--. 1 boinc boinc      9221 Mar 16 07:18 runtime_log.err
[2026-03-16 07:18:14] -rw-------. 1 boinc boinc       661 Mar 16 07:18 2wSKDmtUvL9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDm5uuLDmyFOaTn.diag
[2026-03-16 07:18:14] -rw-r--r--. 1 boinc boinc     21075 Mar 16 07:18 stderr.txt
[2026-03-16 07:18:14] HITS file was successfully produced:
[2026-03-16 07:18:14] -rw-------. 1 boinc boinc 205128755 Mar 16 07:16 shared/HITS.pool.root.1
[2026-03-16 07:18:14]  *** Contents of shared directory: ***
[2026-03-16 07:18:14] total 416176
[2026-03-16 07:18:14] -rw-r--r--. 2 boinc boinc 219437319 Mar 16 05:59 ATLAS.root_0
[2026-03-16 07:18:14] -rw-r--r--. 2 boinc boinc     15845 Mar 16 05:59 start_atlas.sh
[2026-03-16 07:18:14] -rw-r--r--. 2 boinc boinc    597532 Mar 16 05:59 input.tar.gz
[2026-03-16 07:18:14] -rw-------. 1 boinc boinc 205128755 Mar 16 07:16 HITS.pool.root.1
[2026-03-16 07:18:14] -rw-------. 1 boinc boinc    972800 Mar 16 07:18 result.tar.gz
07:18:16 (830817): run_atlas exited; CPU time 18017.477196
07:18:16 (830817): called boinc_finish(0)

</stderr_txt>
]]>

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