Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
03:27:54 (2498119): wrapper (7.7.26015): starting
03:27:54 (2498119): wrapper: running run_atlas (--nthreads 12)
[2026-03-15 03:27:54] Arguments: --nthreads 12
[2026-03-15 03:27:54] Threads: 12
[2026-03-15 03:27:54] Checking for CVMFS
[2026-03-15 03:27:54] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-15 03:27:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-15 03:27:55] Running cvmfs_config stat atlas.cern.ch
[2026-03-15 03:27:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-15 03:27:56] 2.13.3.0 9358 185015 324204 157306 1 14 31984775 32935937 25386 16776704 0 779081558 99.700 592272323 32783 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-03-15 03:27:56] CVMFS is ok
[2026-03-15 03:27:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-15 03:27:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-15 03:27:56] Further information can be found at the LHC@home message board.
[2026-03-15 03:27:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-15 03:27:56] Checking for apptainer binary...
[2026-03-15 03:27:56] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-15 03:27:56] Running /usr/bin/apptainer --version
[2026-03-15 03:27:56] apptainer version 1.4.5-2.el9
[2026-03-15 03:27:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-15 03:27:57] c-6-6.aglt2.org
[2026-03-15 03:27:57] apptainer works
[2026-03-15 03:27:57] Set ATHENA_PROC_NUMBER=12
[2026-03-15 03:27:57] Set ATHENA_CORE_NUMBER=12
[2026-03-15 03:27:57] Starting ATLAS job with PandaID=7048520683
[2026-03-15 03:27:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-15 13:20:15]  *** The last 200 lines of the pilot log: ***
[2026-03-15 13:20:15] 2026-03-15 17:19:40,083 | INFO     | preparing for final server update for job 7048520683 in state='finished'
[2026-03-15 13:20:15] 2026-03-15 17:19:40,083 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-7048520683/jobReport.json
[2026-03-15 13:20:15] 2026-03-15 17:19:40,086 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-03-15 13:20:15] 2026-03-15 17:19:40,089 | INFO     | this job has now completed (state=finished)
[2026-03-15 13:20:15] 2026-03-15 17:19:40,089 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-15 13:20:15] 2026-03-15 17:19:40,089 | INFO     | log transfer has been attempted: DONE
[2026-03-15 13:20:15] 2026-03-15 17:19:40,089 | INFO     | job 7048520683 has finished - writing final server update
[2026-03-15 13:20:15] 2026-03-15 17:19:40,089 | INFO     | total number of processed events: 400 (read)
[2026-03-15 13:20:15] 2026-03-15 17:19:40,106 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7048520683/memory_monitor_summary.json (trf name=prmon)
[2026-03-15 13:20:15] 2026-03-15 17:19:40,116 | INFO     | extracted standard info from prmon json
[2026-03-15 13:20:15] 2026-03-15 17:19:40,116 | INFO     | extracted standard memory fields from prmon json
[2026-03-15 13:20:15] 2026-03-15 17:19:40,117 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-15 13:20:15] 2026-03-15 17:19:40,117 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-15 13:20:15] 2026-03-15 17:19:40,117 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-15 13:20:15] 2026-03-15 17:19:40,153 | INFO     | fitting pss+swap vs Time
[2026-03-15 13:20:15] 2026-03-15 17:19:40,154 | INFO     | sum of square deviations: 60186746136.09668
[2026-03-15 13:20:15] 2026-03-15 17:19:40,184 | INFO     | sum of deviations: 6894387483.003471
[2026-03-15 13:20:15] 2026-03-15 17:19:40,184 | INFO     | mean x: 1773577493.7374785
[2026-03-15 13:20:15] 2026-03-15 17:19:40,185 | INFO     | mean y: 2744580.276338515
[2026-03-15 13:20:15] 2026-03-15 17:19:40,185 | INFO     | intersect: -200418595.3057158
[2026-03-15 13:20:15] 2026-03-15 17:19:40,200 | INFO     | chi2: 2.567946514018937
[2026-03-15 13:20:15] 2026-03-15 17:19:40,201 | INFO     | sum of square deviations: 58641014825.85372
[2026-03-15 13:20:15] 2026-03-15 17:19:40,214 | INFO     | sum of deviations: 6745774186.243916
[2026-03-15 13:20:15] 2026-03-15 17:19:40,215 | INFO     | mean x: 1773577341.2439024
[2026-03-15 13:20:15] 2026-03-15 17:19:40,215 | INFO     | mean y: 2744565.641114983
[2026-03-15 13:20:15] 2026-03-15 17:19:40,215 | INFO     | intersect: -201279056.41590753
[2026-03-15 13:20:15] 2026-03-15 17:19:40,216 | INFO     | chi2: 2.5679560246020774
[2026-03-15 13:20:15] 2026-03-15 17:19:40,216 | INFO     | current chi2=2.5679560246020774 (change=-0.0003703575245302635 %)
[2026-03-15 13:20:15] 2026-03-15 17:19:40,216 | INFO     | right removable region: 573
[2026-03-15 13:20:15] 2026-03-15 17:19:40,217 | INFO     | sum of square deviations: 58640754355.85371
[2026-03-15 13:20:15] 2026-03-15 17:19:40,225 | INFO     | sum of deviations: -123217095595.3172
[2026-03-15 13:20:15] 2026-03-15 17:19:40,225 | INFO     | mean x: 1773577646.2439024
[2026-03-15 13:20:15] 2026-03-15 17:19:40,226 | INFO     | mean y: 2757381.9094076655
[2026-03-15 13:20:15] 2026-03-15 17:19:40,226 | INFO     | intersect: 3729433288.170797
[2026-03-15 13:20:15] 2026-03-15 17:19:40,227 | INFO     | chi2: 0.6237562220975227
[2026-03-15 13:20:15] 2026-03-15 17:19:40,227 | INFO     | current chi2=0.6237562220975227 (change=75.70992157771542 %)
[2026-03-15 13:20:15] 2026-03-15 17:19:40,228 | INFO     | sum of square deviations: 57121530657.557365
[2026-03-15 13:20:15] 2026-03-15 17:19:40,235 | INFO     | sum of deviations: -146881820283.8437
[2026-03-15 13:20:15] 2026-03-15 17:19:40,236 | INFO     | mean x: 1773577798.7469244
[2026-03-15 13:20:15] 2026-03-15 17:19:40,236 | INFO     | mean y: 2759752.6608084356
[2026-03-15 13:20:15] 2026-03-15 17:19:40,236 | INFO     | intersect: 4563322687.444403
[2026-03-15 13:20:15] 2026-03-15 17:19:40,237 | INFO     | chi2: 0.5492889100169347
[2026-03-15 13:20:15] 2026-03-15 17:19:40,237 | INFO     | current chi2=0.5492889100169347 (change=11.938528136869666 %)
[2026-03-15 13:20:15] 2026-03-15 17:19:40,237 | INFO     | left removable region: 20
[2026-03-15 13:20:15] 2026-03-15 17:19:40,238 | INFO     | sum of square deviations: 52436874853.43943
[2026-03-15 13:20:15] 2026-03-15 17:19:40,245 | INFO     | sum of deviations: -101771173477.84268
[2026-03-15 13:20:15] 2026-03-15 17:19:40,245 | INFO     | mean x: 1773577920.7649186
[2026-03-15 13:20:15] 2026-03-15 17:19:40,246 | INFO     | mean y: 2755260.1627486437
[2026-03-15 13:20:15] 2026-03-15 17:19:40,246 | INFO     | intersect: 3444972340.321155
[2026-03-15 13:20:15] 2026-03-15 17:19:40,247 | INFO     | chi2: 0.4653750797933136
[2026-03-15 13:20:15] 2026-03-15 17:19:40,247 | INFO     | current memory leak: -1.94 B/s (using 553 data points, chi2=0.47)
[2026-03-15 13:20:15] 2026-03-15 17:19:40,248 | INFO     | could have reported an average CPU frequency of 2600 MHz (23 samples)
[2026-03-15 13:20:15] 2026-03-15 17:19:40,248 | INFO     | ..............................
[2026-03-15 13:20:15] 2026-03-15 17:19:40,248 | INFO     | . Timing measurements:
[2026-03-15 13:20:15] 2026-03-15 17:19:40,248 | INFO     | . get job = 0 s
[2026-03-15 13:20:15] 2026-03-15 17:19:40,248 | INFO     | . initial setup = 41 s
[2026-03-15 13:20:15] 2026-03-15 17:19:40,248 | INFO     | . payload setup = 48 s
[2026-03-15 13:20:15] 2026-03-15 17:19:40,248 | INFO     | . stage-in = 0 s
[2026-03-15 13:20:15] 2026-03-15 17:19:40,248 | INFO     | . payload execution = 35344 s
[2026-03-15 13:20:15] 2026-03-15 17:19:40,248 | INFO     | . stage-out = 3 s
[2026-03-15 13:20:15] 2026-03-15 17:19:40,249 | INFO     | . log creation = 0 s
[2026-03-15 13:20:15] 2026-03-15 17:19:40,249 | INFO     | ..............................
[2026-03-15 13:20:15] 2026-03-15 17:19:40,430 | INFO     | 
[2026-03-15 13:20:15] 2026-03-15 17:19:40,431 | INFO     | job summary report
[2026-03-15 13:20:15] 2026-03-15 17:19:40,431 | INFO     | --------------------------------------------------
[2026-03-15 13:20:15] 2026-03-15 17:19:40,431 | INFO     | PanDA job id: 7048520683
[2026-03-15 13:20:15] 2026-03-15 17:19:40,431 | INFO     | task id: 48958610
[2026-03-15 13:20:15] 2026-03-15 17:19:40,431 | INFO     | errors: (none)
[2026-03-15 13:20:15] 2026-03-15 17:19:40,431 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-15 13:20:15] 2026-03-15 17:19:40,431 | INFO     | pilot state: finished 
[2026-03-15 13:20:15] 2026-03-15 17:19:40,431 | INFO     | transexitcode: 0
[2026-03-15 13:20:15] 2026-03-15 17:19:40,431 | INFO     | exeerrorcode: 0
[2026-03-15 13:20:15] 2026-03-15 17:19:40,431 | INFO     | exeerrordiag: 
[2026-03-15 13:20:15] 2026-03-15 17:19:40,432 | INFO     | exitcode: 0
[2026-03-15 13:20:15] 2026-03-15 17:19:40,432 | INFO     | exitmsg: OK
[2026-03-15 13:20:15] 2026-03-15 17:19:40,432 | INFO     | cpuconsumptiontime: 45934 s
[2026-03-15 13:20:15] 2026-03-15 17:19:40,432 | INFO     | nevents: 400
[2026-03-15 13:20:15] 2026-03-15 17:19:40,432 | INFO     | neventsw: 0
[2026-03-15 13:20:15] 2026-03-15 17:19:40,432 | INFO     | pid: 2510939
[2026-03-15 13:20:15] 2026-03-15 17:19:40,432 | INFO     | pgrp: 2510939
[2026-03-15 13:20:15] 2026-03-15 17:19:40,432 | INFO     | corecount: 12
[2026-03-15 13:20:15] 2026-03-15 17:19:40,432 | INFO     | event service: False
[2026-03-15 13:20:15] 2026-03-15 17:19:40,433 | INFO     | sizes: {0: 2279692, 1: 2279748, 2: 2280237, 3: 2280265, 35397: 2319778, 35401: 2328776, 35403: 2328960, 35404: 2329182}
[2026-03-15 13:20:15] 2026-03-15 17:19:40,433 | INFO     | --------------------------------------------------
[2026-03-15 13:20:15] 2026-03-15 17:19:40,433 | INFO     | 
[2026-03-15 13:20:15] 2026-03-15 17:19:40,433 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-03-15 13:20:15] 2026-03-15 17:19:40,472 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-15 13:20:15] 2026-03-15 17:19:40,472 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-15 13:20:15] 2026-03-15 17:19:40,473 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-15 13:20:15] 2026-03-15 17:19:40,473 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-15 13:20:15] 2026-03-15 17:19:40,473 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-15 13:20:15] 2026-03-15 17:19:40,473 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-15 13:20:15] 2026-03-15 17:19:40,473 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-15 13:20:15] 2026-03-15 17:19:40,473 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-15 13:20:15] 2026-03-15 17:19:40,473 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-15 13:20:15] 2026-03-15 17:19:40,473 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-15 13:20:15] 2026-03-15 17:19:40,474 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-15 13:20:15] 2026-03-15 17:19:40,474 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-15 13:20:15] 2026-03-15 17:19:40,474 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-15 13:20:15] 2026-03-15 17:19:40,474 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-15 13:20:15] 2026-03-15 17:19:40,474 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-15 13:20:15] 2026-03-15 17:19:40,474 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-15 13:20:15] 2026-03-15 17:19:40,474 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-15 13:20:15] 2026-03-15 17:19:40,474 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-15 13:20:15] 2026-03-15 17:19:40,475 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-15 13:20:15] 2026-03-15 17:19:40,475 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-15 13:20:15] 2026-03-15 17:19:40,475 | INFO     | job 7048520683 has completed (purged errors)
[2026-03-15 13:20:15] 2026-03-15 17:19:40,475 | INFO     | overall cleanup function is called
[2026-03-15 13:20:15] 2026-03-15 17:19:41,491 | INFO     | --- collectZombieJob: --- 10, [2510939]
[2026-03-15 13:20:15] 2026-03-15 17:19:41,491 | INFO     | zombie collector waiting for pid 2510939
[2026-03-15 13:20:15] 2026-03-15 17:19:41,491 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-15 13:20:15] 2026-03-15 17:19:41,491 | INFO     | collected zombie processes
[2026-03-15 13:20:15] 2026-03-15 17:19:41,491 | INFO     | will attempt to kill all subprocesses of pid=2510939
[2026-03-15 13:20:15] 2026-03-15 17:19:41,871 | INFO     | PID=2502721 has CPU usage=16.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-03-15 13:20:15] 2026-03-15 17:19:41,871 | INFO     | .. there are 41 such processes running
[2026-03-15 13:20:15] 2026-03-15 17:19:42,279 | INFO     | process IDs to be killed: [2510939] (in reverse order)
[2026-03-15 13:20:15] 2026-03-15 17:19:42,409 | WARNING  | found no corresponding commands to process id(s)
[2026-03-15 13:20:15] 2026-03-15 17:19:42,409 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-15 13:20:15] 2026-03-15 17:19:42,424 | INFO     | did not find any defunct processes belonging to 2510939
[2026-03-15 13:20:15] 2026-03-15 17:19:42,440 | INFO     | did not find any defunct processes belonging to 2510939
[2026-03-15 13:20:15] 2026-03-15 17:19:42,440 | INFO     | ready for new job
[2026-03-15 13:20:15] 2026-03-15 17:19:42,440 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-15 13:20:15] 2026-03-15 17:19:42,443 | INFO     | **************************************
[2026-03-15 13:20:15] 2026-03-15 17:19:42,443 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-15 13:20:15] 2026-03-15 17:19:42,444 | INFO     | **************************************
[2026-03-15 13:20:15] 2026-03-15 17:19:42,444 | INFO     | 
[2026-03-15 13:20:15] 2026-03-15 17:19:42,446 | INFO     | architecture information:
[2026-03-15 13:20:15] 2026-03-15 17:19:42,446 | INFO     | executing command: cat /etc/os-release
[2026-03-15 13:20:15] 2026-03-15 17:19:42,464 | INFO     | cat /etc/os-release:
[2026-03-15 13:20:15] NAME="CentOS Linux"
[2026-03-15 13:20:15] VERSION="7 (Core)"
[2026-03-15 13:20:15] ID="centos"
[2026-03-15 13:20:15] ID_LIKE="rhel fedora"
[2026-03-15 13:20:15] VERSION_ID="7"
[2026-03-15 13:20:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-15 13:20:15] ANSI_COLOR="0;31"
[2026-03-15 13:20:15] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-15 13:20:15] HOME_URL="https://www.centos.org/"
[2026-03-15 13:20:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-15 13:20:15] 
[2026-03-15 13:20:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-15 13:20:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-15 13:20:15] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-15 13:20:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-15 13:20:15] 
[2026-03-15 13:20:15] 2026-03-15 17:19:42,464 | INFO     | **************************************
[2026-03-15 13:20:15] 2026-03-15 17:19:42,968 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-03-15 13:20:15] 2026-03-15 17:19:43,083 | INFO     | sufficient remaining disk space (76211552256 B)
[2026-03-15 13:20:15] 2026-03-15 17:19:43,083 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-15 13:20:15] 2026-03-15 17:19:43,084 | INFO     | current server update state: UPDATING_FINAL
[2026-03-15 13:20:15] 2026-03-15 17:19:43,084 | INFO     | update_server=False
[2026-03-15 13:20:15] 2026-03-15 17:19:43,084 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-15 13:20:15] 2026-03-15 17:19:43,084 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-15 13:20:15] 2026-03-15 17:19:43,364 | INFO     | [monitor] cgroup control has ended
[2026-03-15 13:20:15] 2026-03-15 17:19:43,509 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-15 13:20:15] 2026-03-15 17:19:43,509 | INFO     | aborting loop
[2026-03-15 13:20:15] 2026-03-15 17:19:43,724 | INFO     | all job control threads have been joined
[2026-03-15 13:20:15] 2026-03-15 17:19:43,827 | INFO     | all data control threads have been joined
[2026-03-15 13:20:15] 2026-03-15 17:19:44,090 | INFO     | [job] retrieve thread has finished
[2026-03-15 13:20:15] 2026-03-15 17:19:44,158 | INFO     | [payload] validate_post thread has finished
[2026-03-15 13:20:15] 2026-03-15 17:19:44,195 | INFO     | [payload] failed_post thread has finished
[2026-03-15 13:20:15] 2026-03-15 17:19:44,517 | INFO     | [job] job monitor thread has finished
[2026-03-15 13:20:15] 2026-03-15 17:19:44,524 | INFO     | all payload control threads have been joined
[2026-03-15 13:20:15] 2026-03-15 17:19:44,574 | INFO     | [payload] execute_payloads thread has finished
[2026-03-15 13:20:15] 2026-03-15 17:19:44,736 | INFO     | [job] control thread has finished
[2026-03-15 13:20:15] 2026-03-15 17:19:44,798 | INFO     | [data] copytool_in thread has finished
[2026-03-15 13:20:15] 2026-03-15 17:19:44,833 | INFO     | [data] control thread has finished
[2026-03-15 13:20:15] 2026-03-15 17:19:44,850 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-15 13:20:15] 2026-03-15 17:19:45,090 | INFO     | [data] copytool_out thread has finished
[2026-03-15 13:20:15] 2026-03-15 17:19:45,244 | INFO     | [job] create_data_payload thread has finished
[2026-03-15 13:20:15] 2026-03-15 17:19:45,304 | INFO     | [payload] validate_pre thread has finished
[2026-03-15 13:20:15] 2026-03-15 17:19:45,445 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-15 13:20:15] 2026-03-15 17:19:45,530 | INFO     | [payload] control thread has finished
[2026-03-15 13:20:15] 2026-03-15 17:19:45,534 | INFO     | [job] validate thread has finished
[2026-03-15 13:20:15] 2026-03-15 17:19:46,451 | INFO     | [job] queue monitor thread has finished
[2026-03-15 13:20:15] 2026-03-15 17:19:48,859 | INFO     | [data] queue_monitor thread has finished
[2026-03-15 13:20:15] 2026-03-15 17:19:53,443 | INFO     | job.realtimelogging is not enabled
[2026-03-15 13:20:15] 2026-03-15 17:19:54,449 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-15 13:20:15] 2026-03-15 17:19:55,808 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139685923350336)>', '<ExcThread(monitor, started 139685212972800)>']
[2026-03-15 13:20:15] 2026-03-15 17:20:00,834 | INFO     | all workflow threads have been joined
[2026-03-15 13:20:15] 2026-03-15 17:20:00,834 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-15 13:20:15] 2026-03-15 17:20:00,834 | INFO     | traces error code: 0
[2026-03-15 13:20:15] 2026-03-15 17:20:00,835 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-15 13:20:15] 2026-03-15 17:20:14,875 | INFO     | PID=2502721 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-15 13:20:15] 2026-03-15 17:20:14,876 | INFO     | .. there are 41 such processes running
[2026-03-15 13:20:15] 2026-03-15 17:20:14,876 | INFO     | found 0 job(s) in 20 queues
[2026-03-15 13:20:15] 2026-03-15 17:20:14,876 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-15 13:20:15] 2026-03-15 17:20:14,876 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-15 13:20:15] 2026-03-15 17:20:14,876 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-15 13:20:15] 2026-03-15 17:20:14,877 | INFO     | [monitor] control thread has ended
[2026-03-15 13:20:15] 2026-03-15 17:20:15,058 [wrapper] ==== pilot stdout END ====
[2026-03-15 13:20:15] 2026-03-15 17:20:15,070 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-15 13:20:15] 2026-03-15 17:20:15,100 [wrapper] pilotpid: 2502721
[2026-03-15 13:20:15] 2026-03-15 17:20:15,128 [wrapper] Pilot exit status: 0
[2026-03-15 13:20:15] 2026-03-15 17:20:15,261 [wrapper] pandaids: 7048520683
[2026-03-15 13:20:15] 2026-03-15 17:20:15,478 [wrapper] cleanup supervisor_pilot 4029365 2502722
[2026-03-15 13:20:15] 2026-03-15 17:20:15,482 [wrapper] Test setup, not cleaning
[2026-03-15 13:20:15] 2026-03-15 17:20:15,485 [wrapper] apfmon messages muted
[2026-03-15 13:20:15] 2026-03-15 17:20:15,487 [wrapper] ==== wrapper stdout END ====
[2026-03-15 13:20:15] 2026-03-15 17:20:15,490 [wrapper] ==== wrapper stderr END ====
[2026-03-15 13:20:15]  *** Error codes and diagnostics ***
[2026-03-15 13:20:15]     "exeErrorCode": 0,
[2026-03-15 13:20:15]     "exeErrorDiag": "",
[2026-03-15 13:20:15]     "pilotErrorCode": 0,
[2026-03-15 13:20:15]     "pilotErrorDiag": "",
[2026-03-15 13:20:15]  *** Listing of results directory ***
[2026-03-15 13:20:15] total 437300
[2026-03-15 13:20:15] -rw-r--r--. 1 boincer umatlas      5111 Mar 10 03:34 queuedata.json
[2026-03-15 13:20:15] -rw-r--r--. 1 boincer umatlas    584627 Mar 10 03:34 pilot3.tar.gz
[2026-03-15 13:20:15] -rwx------. 1 boincer umatlas     36322 Mar 10 03:34 runpilot2-wrapper.sh
[2026-03-15 13:20:15] -rw-r--r--. 1 boincer umatlas       100 Mar 15 03:27 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-15 13:20:15] -rwxr-xr-x. 1 boincer umatlas      7986 Mar 15 03:27 run_atlas
[2026-03-15 13:20:15] -rw-r--r--. 1 boincer umatlas       105 Mar 15 03:27 job.xml
[2026-03-15 13:20:15] -rw-r--r--. 2 boincer umatlas 261219982 Mar 15 03:27 EVNT.48958608._000073.pool.root.1
[2026-03-15 13:20:15] -rw-r--r--. 2 boincer umatlas     15845 Mar 15 03:27 start_atlas.sh
[2026-03-15 13:20:15] drwxrwx--x. 2 boincer umatlas      4096 Mar 15 03:27 shared
[2026-03-15 13:20:15] -rw-r--r--. 2 boincer umatlas    597934 Mar 15 03:27 input.tar.gz
[2026-03-15 13:20:15] -rw-r--r--. 1 boincer umatlas         0 Mar 15 03:27 boinc_lockfile
[2026-03-15 13:20:15] -rw-r--r--. 1 boincer umatlas      2521 Mar 15 03:27 pandaJob.out
[2026-03-15 13:20:15] -rw-------. 1 boincer umatlas        57 Mar 15 03:27 setup.sh.local
[2026-03-15 13:20:15] -rw-------. 1 boincer umatlas   1006481 Mar 15 03:28 agis_schedconf.cvmfs.json
[2026-03-15 13:20:15] -rw-------. 1 boincer umatlas       439 Mar 15 03:29 workernode_map.json
[2026-03-15 13:20:15] drwx------. 5 boincer umatlas      4096 Mar 15 03:29 pilot3
[2026-03-15 13:20:15] -rw-r--r--. 1 boincer umatlas      6659 Mar 15 12:22 init_data.xml
[2026-03-15 13:20:15] -rw-------. 1 boincer umatlas 173619337 Mar 15 13:18 HITS.48958610._001868.pool.root.1
[2026-03-15 13:20:15] -rw-r--r--. 1 boincer umatlas       531 Mar 15 13:18 boinc_task_state.xml
[2026-03-15 13:20:15] -rw-------. 1 boincer umatlas        95 Mar 15 13:19 pilot_heartbeat.json
[2026-03-15 13:20:15] -rw-------. 1 boincer umatlas      1041 Mar 15 13:19 memory_monitor_summary.json
[2026-03-15 13:20:15] -rw-------. 1 boincer umatlas   1511579 Mar 15 13:19 agis_ddmendpoints.agis.ALL.json
[2026-03-15 13:20:15] -rw-------. 1 boincer umatlas    737660 Mar 15 13:19 log.48958610._001868.job.log.tgz.1
[2026-03-15 13:20:15] -rw-------. 1 boincer umatlas      6378 Mar 15 13:19 heartbeat.json
[2026-03-15 13:20:15] -rw-r--r--. 1 boincer umatlas        28 Mar 15 13:20 wrapper_checkpoint.txt
[2026-03-15 13:20:15] -rw-r--r--. 1 boincer umatlas      8192 Mar 15 13:20 boinc_mmap_file
[2026-03-15 13:20:15] -rw-------. 1 boincer umatlas       823 Mar 15 13:20 pilotlog.txt
[2026-03-15 13:20:15] -rw-------. 1 boincer umatlas   3772658 Mar 15 13:20 log.48958610._001868.job.log.1
[2026-03-15 13:20:15] -rw-------. 1 boincer umatlas       357 Mar 15 13:20 output.list
[2026-03-15 13:20:15] -rw-r--r--. 1 boincer umatlas       620 Mar 15 13:20 runtime_log
[2026-03-15 13:20:15] -rw-------. 1 boincer umatlas   4526080 Mar 15 13:20 result.tar.gz
[2026-03-15 13:20:15] -rw-------. 1 boincer umatlas       656 Mar 15 13:20 TWULDmtm6J9n9Rq4apOajLDm4fhM0noT9bVooX4SDmvbcLDmadlefm.diag
[2026-03-15 13:20:15] -rw-r--r--. 1 boincer umatlas      9329 Mar 15 13:20 runtime_log.err
[2026-03-15 13:20:15] -rw-r--r--. 1 boincer umatlas     21433 Mar 15 13:20 stderr.txt
[2026-03-15 13:20:15] HITS file was successfully produced:
[2026-03-15 13:20:15] -rw-------. 1 boincer umatlas 173619337 Mar 15 13:18 shared/HITS.pool.root.1
[2026-03-15 13:20:15]  *** Contents of shared directory: ***
[2026-03-15 13:20:15] total 429676
[2026-03-15 13:20:15] -rw-r--r--. 2 boincer umatlas 261219982 Mar 15 03:27 ATLAS.root_0
[2026-03-15 13:20:15] -rw-r--r--. 2 boincer umatlas     15845 Mar 15 03:27 start_atlas.sh
[2026-03-15 13:20:15] -rw-r--r--. 2 boincer umatlas    597934 Mar 15 03:27 input.tar.gz
[2026-03-15 13:20:15] -rw-------. 1 boincer umatlas 173619337 Mar 15 13:18 HITS.pool.root.1
[2026-03-15 13:20:15] -rw-------. 1 boincer umatlas   4526080 Mar 15 13:20 result.tar.gz
13:20:16 (2498119): run_atlas exited; CPU time 47434.915062
13:20:16 (2498119): called boinc_finish(0)

</stderr_txt>
]]>

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