Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:22:03 (1573652): wrapper (7.7.26015): starting
01:22:03 (1573652): wrapper: running run_atlas (--nthreads 4)
[2026-03-16 01:22:03] Arguments: --nthreads 4
[2026-03-16 01:22:03] Threads: 4
[2026-03-16 01:22:03] Checking for CVMFS
[2026-03-16 01:22:03] No cvmfs_config command found, will try listing directly
[2026-03-16 01:22:03] CVMFS is ok
[2026-03-16 01:22:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-16 01:22:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-16 01:22:03] Further information can be found at the LHC@home message board.
[2026-03-16 01:22:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-16 01:22:03] Checking for apptainer binary...
[2026-03-16 01:22:03] which: no apptainer in ((null))
[2026-03-16 01:22:03] apptainer is not installed, using version from CVMFS
[2026-03-16 01:22:03] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-16 01:22:03] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot220/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut22.grid.cesnet.cz
[2026-03-16 01:22:03] apptainer works
[2026-03-16 01:22:03] Set ATHENA_PROC_NUMBER=4
[2026-03-16 01:22:03] Set ATHENA_CORE_NUMBER=4
[2026-03-16 01:22:03] Starting ATLAS job with PandaID=7050078466
[2026-03-16 01:22:03] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot220/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-16 02:53:50]  *** The last 200 lines of the pilot log: ***
[2026-03-16 02:53:50]  protocol_id=None
[2026-03-16 02:53:50]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-16 02:53:50]  replicas=None
[2026-03-16 02:53:50]  scope=mc23_13p6TeV
[2026-03-16 02:53:50]  status=None
[2026-03-16 02:53:50]  status_code=0
[2026-03-16 02:53:50]  storage_token=
[2026-03-16 02:53:50]  surl=/var/lib/boinc/var/slot220/slots/0/PanDA_Pilot-7050078466/log.48967094._003500.job.log.tgz.1
[2026-03-16 02:53:50]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/61/32/log.48967094._003500.job.log.tgz.1
[2026-03-16 02:53:50]  workdir=None
[2026-03-16 02:53:50] ]
[2026-03-16 02:53:50] 2026-03-16 01:53:12,505 | INFO     | time since job start (5457s) is within the limit (345600.0s)
[2026-03-16 02:53:50] 2026-03-16 01:53:12,517 | INFO     | transferring file log.48967094._003500.job.log.tgz.1 from /var/lib/boinc/var/slot220/slots/0/PanDA_Pilot-7050078466/log.48967094._003500.job.log.tgz.1 to /var/lib/
[2026-03-16 02:53:50] 2026-03-16 01:53:12,517 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot220/slots/0/PanDA_Pilot-7050078466/log.48967094._003500.job.log.tgz.1 /var/lib/boinc/var/slot220/slots/0/
[2026-03-16 02:53:50] 2026-03-16 01:53:12,532 | INFO     | adding to output.list: log.48967094._003500.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/61/32/log.48967094._003500.job.log.tg
[2026-03-16 02:53:50] 2026-03-16 01:53:12,532 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-16 02:53:50] 2026-03-16 01:53:12,533 | INFO     | summary of transferred files:
[2026-03-16 02:53:50] 2026-03-16 01:53:12,533 | INFO     |  -- lfn=log.48967094._003500.job.log.tgz.1, status_code=0, status=transferred
[2026-03-16 02:53:50] 2026-03-16 01:53:12,533 | INFO     | stage-out finished correctly
[2026-03-16 02:53:50] 2026-03-16 01:53:13,099 | WARNING  | process 1589911 can no longer be monitored (due to stat problems) - aborting
[2026-03-16 02:53:50] 2026-03-16 01:53:13,099 | INFO     | using path: /var/lib/boinc/var/slot220/slots/0/PanDA_Pilot-7050078466/memory_monitor_summary.json (trf name=prmon)
[2026-03-16 02:53:50] 2026-03-16 01:53:13,511 | INFO     | number of running child processes to parent process 1589911: 1
[2026-03-16 02:53:50] 2026-03-16 01:53:13,512 | INFO     | maximum number of monitored processes: 6
[2026-03-16 02:53:50] 2026-03-16 01:53:14,522 | INFO     | time since job start (5459s) is within the limit (345600.0s)
[2026-03-16 02:53:50] 2026-03-16 01:53:15,196 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-16 02:53:50] 2026-03-16 01:53:16,015 | INFO     | monitor loop #397: job 0:7050078466 is in state 'finished'
[2026-03-16 02:53:50] 2026-03-16 01:53:16,015 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-16 02:53:50] 2026-03-16 01:53:16,489 | INFO     | job 7050078466 has state=finished
[2026-03-16 02:53:50] 2026-03-16 01:53:16,489 | INFO     | preparing for final server update for job 7050078466 in state='finished'
[2026-03-16 02:53:50] 2026-03-16 01:53:16,527 | INFO     | time since job start (5461s) is within the limit (345600.0s)
[2026-03-16 02:53:50] 2026-03-16 01:53:17,107 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-03-16 02:53:50] 2026-03-16 01:53:17,107 | INFO     | reading metadata from: /var/lib/boinc/var/slot220/slots/0/PanDA_Pilot-7050078466/jobReport.json
[2026-03-16 02:53:50] 2026-03-16 01:53:17,108 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot220/slots/0/workernode_map.json
[2026-03-16 02:53:50] 2026-03-16 01:53:17,108 | INFO     | this job has now completed (state=finished)
[2026-03-16 02:53:50] 2026-03-16 01:53:17,108 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-16 02:53:50] 2026-03-16 01:53:17,108 | INFO     | log transfer has been attempted: DONE
[2026-03-16 02:53:50] 2026-03-16 01:53:17,108 | INFO     | job 7050078466 has finished - writing final server update
[2026-03-16 02:53:50] 2026-03-16 01:53:17,108 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_2496897/.job.ad'
[2026-03-16 02:53:50] 2026-03-16 01:53:17,108 | INFO     | total number of processed events: 400 (read)
[2026-03-16 02:53:50] 2026-03-16 01:53:17,118 | INFO     | using path: /var/lib/boinc/var/slot220/slots/0/PanDA_Pilot-7050078466/memory_monitor_summary.json (trf name=prmon)
[2026-03-16 02:53:50] 2026-03-16 01:53:17,119 | INFO     | extracted standard info from prmon json
[2026-03-16 02:53:50] 2026-03-16 01:53:17,119 | INFO     | extracted standard memory fields from prmon json
[2026-03-16 02:53:50] 2026-03-16 01:53:17,119 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-16 02:53:50] 2026-03-16 01:53:17,119 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-16 02:53:50] 2026-03-16 01:53:17,119 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-16 02:53:50] 2026-03-16 01:53:17,120 | INFO     | fitting pss+swap vs Time
[2026-03-16 02:53:50] 2026-03-16 01:53:17,120 | INFO     | sum of square deviations: 177275882.0
[2026-03-16 02:53:50] 2026-03-16 01:53:17,120 | INFO     | sum of deviations: -1470487228.0
[2026-03-16 02:53:50] 2026-03-16 01:53:17,120 | INFO     | mean x: 1773623361.0
[2026-03-16 02:53:50] 2026-03-16 01:53:17,120 | INFO     | mean y: 2345982.8674698793
[2026-03-16 02:53:50] 2026-03-16 01:53:17,120 | INFO     | intersect: 14714389551.393805
[2026-03-16 02:53:50] 2026-03-16 01:53:17,120 | INFO     | chi2: 0.001934722870013322
[2026-03-16 02:53:50] 2026-03-16 01:53:17,120 | INFO     | current memory leak: -8.29 B/s (using 83 data points, chi2=0.00)
[2026-03-16 02:53:50] 2026-03-16 01:53:17,120 | INFO     | could have reported an average CPU frequency of 3597 MHz (7 samples)
[2026-03-16 02:53:50] 2026-03-16 01:53:17,120 | INFO     | ..............................
[2026-03-16 02:53:50] 2026-03-16 01:53:17,120 | INFO     | . Timing measurements:
[2026-03-16 02:53:50] 2026-03-16 01:53:17,120 | INFO     | . get job = 0 s
[2026-03-16 02:53:50] 2026-03-16 01:53:17,120 | INFO     | . initial setup = 4 s
[2026-03-16 02:53:50] 2026-03-16 01:53:17,120 | INFO     | . payload setup = 4 s
[2026-03-16 02:53:50] 2026-03-16 01:53:17,120 | INFO     | . stage-in = 0 s
[2026-03-16 02:53:50] 2026-03-16 01:53:17,120 | INFO     | . payload execution = 5435 s
[2026-03-16 02:53:50] 2026-03-16 01:53:17,120 | INFO     | . stage-out = 0 s
[2026-03-16 02:53:50] 2026-03-16 01:53:17,120 | INFO     | . log creation = 0 s
[2026-03-16 02:53:50] 2026-03-16 01:53:17,120 | INFO     | ..............................
[2026-03-16 02:53:50] 2026-03-16 01:53:17,148 | INFO     | 
[2026-03-16 02:53:50] 2026-03-16 01:53:17,149 | INFO     | job summary report
[2026-03-16 02:53:50] 2026-03-16 01:53:17,149 | INFO     | --------------------------------------------------
[2026-03-16 02:53:50] 2026-03-16 01:53:17,149 | INFO     | PanDA job id: 7050078466
[2026-03-16 02:53:50] 2026-03-16 01:53:17,149 | INFO     | task id: 48967094
[2026-03-16 02:53:50] 2026-03-16 01:53:17,149 | INFO     | errors: (none)
[2026-03-16 02:53:50] 2026-03-16 01:53:17,149 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-16 02:53:50] 2026-03-16 01:53:17,149 | INFO     | pilot state: finished 
[2026-03-16 02:53:50] 2026-03-16 01:53:17,149 | INFO     | transexitcode: 0
[2026-03-16 02:53:50] 2026-03-16 01:53:17,149 | INFO     | exeerrorcode: 0
[2026-03-16 02:53:50] 2026-03-16 01:53:17,149 | INFO     | exeerrordiag: 
[2026-03-16 02:53:50] 2026-03-16 01:53:17,149 | INFO     | exitcode: 0
[2026-03-16 02:53:50] 2026-03-16 01:53:17,149 | INFO     | exitmsg: OK
[2026-03-16 02:53:50] 2026-03-16 01:53:17,149 | INFO     | cpuconsumptiontime: 20824 s
[2026-03-16 02:53:50] 2026-03-16 01:53:17,149 | INFO     | nevents: 400
[2026-03-16 02:53:50] 2026-03-16 01:53:17,149 | INFO     | neventsw: 0
[2026-03-16 02:53:50] 2026-03-16 01:53:17,149 | INFO     | pid: 1589911
[2026-03-16 02:53:50] 2026-03-16 01:53:17,149 | INFO     | pgrp: 1589911
[2026-03-16 02:53:50] 2026-03-16 01:53:17,149 | INFO     | corecount: 4
[2026-03-16 02:53:50] 2026-03-16 01:53:17,149 | INFO     | event service: False
[2026-03-16 02:53:50] 2026-03-16 01:53:17,149 | INFO     | sizes: {0: 2279974, 1: 2280236, 11: 2280264, 5444: 2306880, 5446: 2315902, 5449: 2315958, 5451: 2316280}
[2026-03-16 02:53:50] 2026-03-16 01:53:17,149 | INFO     | --------------------------------------------------
[2026-03-16 02:53:50] 2026-03-16 01:53:17,149 | INFO     | 
[2026-03-16 02:53:50] 2026-03-16 01:53:17,149 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot220/slots/0
[2026-03-16 02:53:50] 2026-03-16 01:53:17,166 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-16 02:53:50] 2026-03-16 01:53:17,167 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-16 02:53:50] 2026-03-16 01:53:17,167 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-16 02:53:50] 2026-03-16 01:53:17,167 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-16 02:53:50] 2026-03-16 01:53:17,167 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-16 02:53:50] 2026-03-16 01:53:17,167 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-16 02:53:50] 2026-03-16 01:53:17,167 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-16 02:53:50] 2026-03-16 01:53:17,167 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-16 02:53:50] 2026-03-16 01:53:17,167 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-16 02:53:50] 2026-03-16 01:53:17,167 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-16 02:53:50] 2026-03-16 01:53:17,167 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-16 02:53:50] 2026-03-16 01:53:17,167 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-16 02:53:50] 2026-03-16 01:53:17,167 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-16 02:53:50] 2026-03-16 01:53:17,167 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-16 02:53:50] 2026-03-16 01:53:17,167 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-16 02:53:50] 2026-03-16 01:53:17,167 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-16 02:53:50] 2026-03-16 01:53:17,167 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-16 02:53:50] 2026-03-16 01:53:17,167 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-16 02:53:50] 2026-03-16 01:53:17,167 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-16 02:53:50] 2026-03-16 01:53:17,167 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-16 02:53:50] 2026-03-16 01:53:17,167 | INFO     | job 7050078466 has completed (purged errors)
[2026-03-16 02:53:50] 2026-03-16 01:53:17,167 | INFO     | overall cleanup function is called
[2026-03-16 02:53:50] 2026-03-16 01:53:18,174 | INFO     | --- collectZombieJob: --- 10, [1589911]
[2026-03-16 02:53:50] 2026-03-16 01:53:18,174 | INFO     | zombie collector waiting for pid 1589911
[2026-03-16 02:53:50] 2026-03-16 01:53:18,175 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-16 02:53:50] 2026-03-16 01:53:18,175 | INFO     | collected zombie processes
[2026-03-16 02:53:50] 2026-03-16 01:53:18,175 | INFO     | will attempt to kill all subprocesses of pid=1589911
[2026-03-16 02:53:50] 2026-03-16 01:53:18,594 | INFO     | process IDs to be killed: [1589911] (in reverse order)
[2026-03-16 02:53:50] 2026-03-16 01:53:18,782 | WARNING  | found no corresponding commands to process id(s)
[2026-03-16 02:53:50] 2026-03-16 01:53:18,782 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-16 02:53:50] 2026-03-16 01:53:18,809 | INFO     | did not find any defunct processes belonging to 1589911
[2026-03-16 02:53:50] 2026-03-16 01:53:18,836 | INFO     | did not find any defunct processes belonging to 1589911
[2026-03-16 02:53:50] 2026-03-16 01:53:18,836 | INFO     | ready for new job
[2026-03-16 02:53:50] 2026-03-16 01:53:18,836 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-16 02:53:50] 2026-03-16 01:53:18,837 | INFO     | **************************************
[2026-03-16 02:53:50] 2026-03-16 01:53:18,837 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-16 02:53:50] 2026-03-16 01:53:18,837 | INFO     | **************************************
[2026-03-16 02:53:50] 2026-03-16 01:53:18,837 | INFO     | 
[2026-03-16 02:53:50] 2026-03-16 01:53:18,843 | INFO     | architecture information:
[2026-03-16 02:53:50] 2026-03-16 01:53:18,843 | INFO     | executing command: cat /etc/os-release
[2026-03-16 02:53:50] 2026-03-16 01:53:18,857 | INFO     | cat /etc/os-release:
[2026-03-16 02:53:50] NAME="CentOS Linux"
[2026-03-16 02:53:50] VERSION="7 (Core)"
[2026-03-16 02:53:50] ID="centos"
[2026-03-16 02:53:50] ID_LIKE="rhel fedora"
[2026-03-16 02:53:50] VERSION_ID="7"
[2026-03-16 02:53:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-16 02:53:50] ANSI_COLOR="0;31"
[2026-03-16 02:53:50] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-16 02:53:50] HOME_URL="https://www.centos.org/"
[2026-03-16 02:53:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-16 02:53:50] 
[2026-03-16 02:53:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-16 02:53:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-16 02:53:50] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-16 02:53:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-16 02:53:50] 
[2026-03-16 02:53:50] 2026-03-16 01:53:18,857 | INFO     | **************************************
[2026-03-16 02:53:50] 2026-03-16 01:53:19,360 | INFO     | executing command: df -mP /var/lib/boinc/var/slot220/slots/0
[2026-03-16 02:53:50] 2026-03-16 01:53:19,374 | INFO     | sufficient remaining disk space (224461324288 B)
[2026-03-16 02:53:50] 2026-03-16 01:53:19,374 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-16 02:53:50] 2026-03-16 01:53:19,374 | INFO     | current server update state: UPDATING_FINAL
[2026-03-16 02:53:50] 2026-03-16 01:53:19,374 | INFO     | update_server=False
[2026-03-16 02:53:50] 2026-03-16 01:53:19,374 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-16 02:53:50] 2026-03-16 01:53:19,511 | INFO     | all data control threads have been joined
[2026-03-16 02:53:50] 2026-03-16 01:53:19,523 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-16 02:53:50] 2026-03-16 01:53:19,523 | INFO     | aborting loop
[2026-03-16 02:53:50] 2026-03-16 01:53:19,556 | INFO     | all payload control threads have been joined
[2026-03-16 02:53:50] 2026-03-16 01:53:20,379 | INFO     | [job] retrieve thread has finished
[2026-03-16 02:53:50] 2026-03-16 01:53:20,514 | INFO     | [data] control thread has finished
[2026-03-16 02:53:50] 2026-03-16 01:53:20,529 | INFO     | [job] job monitor thread has finished
[2026-03-16 02:53:50] 2026-03-16 01:53:20,561 | INFO     | [payload] control thread has finished
[2026-03-16 02:53:50] 2026-03-16 01:53:20,589 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-16 02:53:50] 2026-03-16 01:53:20,798 | INFO     | [payload] failed_post thread has finished
[2026-03-16 02:53:50] 2026-03-16 01:53:20,818 | INFO     | all job control threads have been joined
[2026-03-16 02:53:50] 2026-03-16 01:53:21,149 | INFO     | [job] create_data_payload thread has finished
[2026-03-16 02:53:50] 2026-03-16 01:53:21,156 | INFO     | [job] validate thread has finished
[2026-03-16 02:53:50] 2026-03-16 01:53:21,212 | INFO     | [payload] validate_pre thread has finished
[2026-03-16 02:53:50] 2026-03-16 01:53:21,229 | INFO     | [payload] validate_post thread has finished
[2026-03-16 02:53:50] 2026-03-16 01:53:21,248 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-16 02:53:50] 2026-03-16 01:53:21,406 | INFO     | [data] copytool_in thread has finished
[2026-03-16 02:53:50] 2026-03-16 01:53:21,479 | INFO     | [payload] execute_payloads thread has finished
[2026-03-16 02:53:50] 2026-03-16 01:53:21,823 | INFO     | [job] control thread has finished
[2026-03-16 02:53:50] 2026-03-16 01:53:22,158 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-16 02:53:50] 2026-03-16 01:53:22,589 | INFO     | [data] copytool_out thread has finished
[2026-03-16 02:53:50] 2026-03-16 01:53:23,163 | INFO     | [job] queue monitor thread has finished
[2026-03-16 02:53:50] 2026-03-16 01:53:23,488 | INFO     | [monitor] cgroup control has ended
[2026-03-16 02:53:50] 2026-03-16 01:53:25,254 | INFO     | [data] queue_monitor thread has finished
[2026-03-16 02:53:50] 2026-03-16 01:53:29,469 | INFO     | job.realtimelogging is not enabled
[2026-03-16 02:53:50] 2026-03-16 01:53:30,475 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-16 02:53:50] 2026-03-16 01:53:31,512 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23021976438592)>', '<ExcThread(monitor, started 23021728556800)>']
[2026-03-16 02:53:50] 2026-03-16 01:53:36,538 | INFO     | all workflow threads have been joined
[2026-03-16 02:53:50] 2026-03-16 01:53:36,538 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-16 02:53:50] 2026-03-16 01:53:36,538 | INFO     | traces error code: 0
[2026-03-16 02:53:50] 2026-03-16 01:53:36,538 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-16 02:53:50] 2026-03-16 01:53:50,109 | INFO     | PID=1578281 has CPU usage=6.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-16 02:53:50] 2026-03-16 01:53:50,110 | INFO     | .. there are 31 such processes running
[2026-03-16 02:53:50] 2026-03-16 01:53:50,110 | INFO     | found 0 job(s) in 20 queues
[2026-03-16 02:53:50] 2026-03-16 01:53:50,110 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-16 02:53:50] 2026-03-16 01:53:50,110 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-16 02:53:50] 2026-03-16 01:53:50,110 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-16 02:53:50] 2026-03-16 01:53:50,110 | INFO     | [monitor] control thread has ended
[2026-03-16 02:53:50] 2026-03-16 01:53:50,305 [wrapper] ==== pilot stdout END ====
[2026-03-16 02:53:50] 2026-03-16 01:53:50,307 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-16 02:53:50] 2026-03-16 01:53:50,309 [wrapper] pilotpid: 1578281
[2026-03-16 02:53:50] 2026-03-16 01:53:50,310 [wrapper] Pilot exit status: 0
[2026-03-16 02:53:50] 2026-03-16 01:53:50,317 [wrapper] pandaids: 7050078466
[2026-03-16 02:53:50] 2026-03-16 01:53:50,408 [wrapper] cleanup supervisor_pilot 2067483 1578282
[2026-03-16 02:53:50] 2026-03-16 01:53:50,410 [wrapper] Test setup, not cleaning
[2026-03-16 02:53:50] 2026-03-16 01:53:50,413 [wrapper] apfmon messages muted
[2026-03-16 02:53:50] 2026-03-16 01:53:50,414 [wrapper] ==== wrapper stdout END ====
[2026-03-16 02:53:50] 2026-03-16 01:53:50,415 [wrapper] ==== wrapper stderr END ====
[2026-03-16 02:53:50]  *** Error codes and diagnostics ***
[2026-03-16 02:53:50]     "exeErrorCode": 0,
[2026-03-16 02:53:50]     "exeErrorDiag": "",
[2026-03-16 02:53:50]     "pilotErrorCode": 0,
[2026-03-16 02:53:50]     "pilotErrorDiag": "",
[2026-03-16 02:53:50]  *** Listing of results directory ***
[2026-03-16 02:53:50] total 423252
[2026-03-16 02:53:50] -rw-r--r--. 1 boinc boinc    585013 Mar 11 20:14 pilot3.tar.gz
[2026-03-16 02:53:50] -rwx------. 1 boinc boinc     36322 Mar 11 20:14 runpilot2-wrapper.sh
[2026-03-16 02:53:50] -rw-r--r--. 1 boinc boinc      5111 Mar 11 20:14 queuedata.json
[2026-03-16 02:53:50] -rw-r--r--. 1 boinc boinc       100 Mar 16 01:21 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-16 02:53:50] -rwxr-xr-x. 1 boinc boinc      7986 Mar 16 01:21 run_atlas
[2026-03-16 02:53:50] -rw-r--r--. 1 boinc boinc       105 Mar 16 01:21 job.xml
[2026-03-16 02:53:50] -rw-r--r--. 1 boinc boinc      6710 Mar 16 01:22 init_data.xml
[2026-03-16 02:53:50] -rw-r--r--. 2 boinc boinc 219360668 Mar 16 01:22 EVNT.48967092._000158.pool.root.1
[2026-03-16 02:53:50] -rw-r--r--. 2 boinc boinc     15845 Mar 16 01:22 start_atlas.sh
[2026-03-16 02:53:50] drwxrwx--x. 2 boinc boinc      4096 Mar 16 01:22 shared
[2026-03-16 02:53:50] -rw-r--r--. 2 boinc boinc    597537 Mar 16 01:22 input.tar.gz
[2026-03-16 02:53:50] -rw-r--r--. 1 boinc boinc         0 Mar 16 01:22 boinc_lockfile
[2026-03-16 02:53:50] -rw-r--r--. 1 boinc boinc      2597 Mar 16 01:22 pandaJob.out
[2026-03-16 02:53:50] -rw-------. 1 boinc boinc   1006471 Mar 16 01:22 agis_schedconf.cvmfs.json
[2026-03-16 02:53:50] -rw-------. 1 boinc boinc   1511579 Mar 16 01:22 agis_ddmendpoints.agis.ALL.json
[2026-03-16 02:53:50] -rw-------. 1 boinc boinc       444 Mar 16 01:22 workernode_map.json
[2026-03-16 02:53:50] drwx------. 5 boinc boinc      4096 Mar 16 01:22 pilot3
[2026-03-16 02:53:50] -rw-------. 1 boinc boinc 207939144 Mar 16 02:52 HITS.48967094._003500.pool.root.1
[2026-03-16 02:53:50] -rw-r--r--. 1 boinc boinc       529 Mar 16 02:52 boinc_task_state.xml
[2026-03-16 02:53:50] -rw-------. 1 boinc boinc      1025 Mar 16 02:53 memory_monitor_summary.json
[2026-03-16 02:53:50] -rw-------. 1 boinc boinc        95 Mar 16 02:53 pilot_heartbeat.json
[2026-03-16 02:53:50] -rw-------. 1 boinc boinc    291902 Mar 16 02:53 log.48967094._003500.job.log.tgz.1
[2026-03-16 02:53:50] -rw-------. 1 boinc boinc      6348 Mar 16 02:53 heartbeat.json
[2026-03-16 02:53:50] -rw-r--r--. 1 boinc boinc      8192 Mar 16 02:53 boinc_mmap_file
[2026-03-16 02:53:50] -rw-r--r--. 1 boinc boinc        27 Mar 16 02:53 wrapper_checkpoint.txt
[2026-03-16 02:53:50] -rw-------. 1 boinc boinc       823 Mar 16 02:53 pilotlog.txt
[2026-03-16 02:53:50] -rw-------. 1 boinc boinc    795155 Mar 16 02:53 log.48967094._003500.job.log.1
[2026-03-16 02:53:50] -rw-------. 1 boinc boinc       357 Mar 16 02:53 output.list
[2026-03-16 02:53:50] -rw-r--r--. 1 boinc boinc       620 Mar 16 02:53 runtime_log
[2026-03-16 02:53:50] -rw-------. 1 boinc boinc   1105920 Mar 16 02:53 result.tar.gz
[2026-03-16 02:53:50] -rw-r--r--. 1 boinc boinc      9221 Mar 16 02:53 runtime_log.err
[2026-03-16 02:53:50] -rw-------. 1 boinc boinc       662 Mar 16 02:53 R0mMDmdBeK9n9Rq4apOajLDm4fhM0noT9bVooX4SDmCvhLDm0AxqJo.diag
[2026-03-16 02:53:50] -rw-r--r--. 1 boinc boinc     21710 Mar 16 02:53 stderr.txt
[2026-03-16 02:53:50] HITS file was successfully produced:
[2026-03-16 02:53:50] -rw-------. 1 boinc boinc 207939144 Mar 16 02:52 shared/HITS.pool.root.1
[2026-03-16 02:53:50]  *** Contents of shared directory: ***
[2026-03-16 02:53:50] total 418976
[2026-03-16 02:53:50] -rw-r--r--. 2 boinc boinc 219360668 Mar 16 01:22 ATLAS.root_0
[2026-03-16 02:53:50] -rw-r--r--. 2 boinc boinc     15845 Mar 16 01:22 start_atlas.sh
[2026-03-16 02:53:50] -rw-r--r--. 2 boinc boinc    597537 Mar 16 01:22 input.tar.gz
[2026-03-16 02:53:50] -rw-------. 1 boinc boinc 207939144 Mar 16 02:52 HITS.pool.root.1
[2026-03-16 02:53:50] -rw-------. 1 boinc boinc   1105920 Mar 16 02:53 result.tar.gz
02:53:52 (1573652): run_atlas exited; CPU time 21066.956227
02:53:52 (1573652): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN