Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:46:05 (335031): wrapper (7.7.26015): starting
21:46:05 (335031): wrapper: running run_atlas (--nthreads 12)
[2026-03-15 21:46:05] Arguments: --nthreads 12
[2026-03-15 21:46:05] Threads: 12
[2026-03-15 21:46:05] Checking for CVMFS
[2026-03-15 21:46:05] No cvmfs_config command found, will try listing directly
[2026-03-15 21:46:05] CVMFS is ok
[2026-03-15 21:46:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-15 21:46:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-15 21:46:05] Further information can be found at the LHC@home message board.
[2026-03-15 21:46:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-15 21:46:05] Checking for apptainer binary...
[2026-03-15 21:46:05] which: no apptainer in ((null))
[2026-03-15 21:46:05] apptainer is not installed, using version from CVMFS
[2026-03-15 21:46:05] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-15 21:46:05] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot96/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut18.grid.cesnet.cz
[2026-03-15 21:46:05] apptainer works
[2026-03-15 21:46:05] Set ATHENA_PROC_NUMBER=12
[2026-03-15 21:46:05] Set ATHENA_CORE_NUMBER=12
[2026-03-15 21:46:05] Starting ATLAS job with PandaID=7043830364
[2026-03-15 21:46:05] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot96/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-15 22:18:22]  *** The last 200 lines of the pilot log: ***
[2026-03-15 22:18:22]  guid=0fe1a565-4394-4848-a22b-966210895abc
[2026-03-15 22:18:22]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-15 22:18:22]  is_altstaged=None
[2026-03-15 22:18:22]  is_tar=False
[2026-03-15 22:18:22]  lfn=log.48966988._012106.job.log.tgz.1
[2026-03-15 22:18:22]  mtime=0
[2026-03-15 22:18:22]  protocol_id=None
[2026-03-15 22:18:22]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-15 22:18:22]  replicas=None
[2026-03-15 22:18:22]  scope=mc23_13p6TeV
[2026-03-15 22:18:22]  status=None
[2026-03-15 22:18:22]  status_code=0
[2026-03-15 22:18:22]  storage_token=
[2026-03-15 22:18:22]  surl=/var/lib/boinc/var/slot96/slots/0/PanDA_Pilot-7043830364/log.48966988._012106.job.log.tgz.1
[2026-03-15 22:18:22]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/10/f6/log.48966988._012106.job.log.tgz.1
[2026-03-15 22:18:22]  workdir=None
[2026-03-15 22:18:22] ]
[2026-03-15 22:18:22] 2026-03-15 21:17:21,038 | INFO     | transferring file log.48966988._012106.job.log.tgz.1 from /var/lib/boinc/var/slot96/slots/0/PanDA_Pilot-7043830364/log.48966988._012106.job.log.tgz.1 to /var/lib/b
[2026-03-15 22:18:22] 2026-03-15 21:17:21,039 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot96/slots/0/PanDA_Pilot-7043830364/log.48966988._012106.job.log.tgz.1 /var/lib/boinc/var/slot96/slots/0/lo
[2026-03-15 22:18:22] 2026-03-15 21:17:21,053 | INFO     | adding to output.list: log.48966988._012106.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/10/f6/log.48966988._012106.job.log.tg
[2026-03-15 22:18:22] 2026-03-15 21:17:21,054 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-15 22:18:22] 2026-03-15 21:17:21,054 | INFO     | summary of transferred files:
[2026-03-15 22:18:22] 2026-03-15 21:17:21,054 | INFO     |  -- lfn=log.48966988._012106.job.log.tgz.1, status_code=0, status=transferred
[2026-03-15 22:18:22] 2026-03-15 21:17:21,054 | INFO     | stage-out finished correctly
[2026-03-15 22:18:22] 2026-03-15 21:17:21,324 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-15 22:18:22] 2026-03-15 21:17:21,923 | INFO     | time since job start (1866s) is within the limit (349056.0s)
[2026-03-15 22:18:22] 2026-03-15 21:17:23,071 | INFO     | monitor loop #143: job 0:7043830364 is in state 'finished'
[2026-03-15 22:18:22] 2026-03-15 21:17:23,071 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-15 22:18:22] 2026-03-15 21:17:23,344 | INFO     | PID=347623 has CPU usage=12.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-15 22:18:22] 2026-03-15 21:17:23,344 | INFO     | .. there are 11 such processes running
[2026-03-15 22:18:22] 2026-03-15 21:17:23,559 | INFO     | job 7043830364 has state=finished
[2026-03-15 22:18:22] 2026-03-15 21:17:23,559 | INFO     | preparing for final server update for job 7043830364 in state='finished'
[2026-03-15 22:18:22] 2026-03-15 21:17:23,559 | INFO     | reading metadata from: /var/lib/boinc/var/slot96/slots/0/PanDA_Pilot-7043830364/jobReport.json
[2026-03-15 22:18:22] 2026-03-15 21:17:23,560 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot96/slots/0/workernode_map.json
[2026-03-15 22:18:22] 2026-03-15 21:17:23,561 | INFO     | this job has now completed (state=finished)
[2026-03-15 22:18:22] 2026-03-15 21:17:23,561 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-15 22:18:22] 2026-03-15 21:17:23,561 | INFO     | log transfer has been attempted: DONE
[2026-03-15 22:18:22] 2026-03-15 21:17:23,561 | INFO     | job 7043830364 has finished - writing final server update
[2026-03-15 22:18:22] 2026-03-15 21:17:23,561 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_17525/.job.ad'
[2026-03-15 22:18:22] 2026-03-15 21:17:23,561 | INFO     | total number of processed events: 400 (read)
[2026-03-15 22:18:22] 2026-03-15 21:17:23,577 | INFO     | using path: /var/lib/boinc/var/slot96/slots/0/PanDA_Pilot-7043830364/memory_monitor_summary.json (trf name=prmon)
[2026-03-15 22:18:22] 2026-03-15 21:17:23,577 | INFO     | extracted standard info from prmon json
[2026-03-15 22:18:22] 2026-03-15 21:17:23,577 | INFO     | extracted standard memory fields from prmon json
[2026-03-15 22:18:22] 2026-03-15 21:17:23,577 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-15 22:18:22] 2026-03-15 21:17:23,578 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-15 22:18:22] 2026-03-15 21:17:23,578 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-15 22:18:22] 2026-03-15 21:17:23,578 | INFO     | fitting pss+swap vs Time
[2026-03-15 22:18:22] 2026-03-15 21:17:23,578 | INFO     | sum of square deviations: 4279150.0
[2026-03-15 22:18:22] 2026-03-15 21:17:23,578 | INFO     | sum of deviations: 3011112.5
[2026-03-15 22:18:22] 2026-03-15 21:17:23,578 | INFO     | mean x: 1773608600.5
[2026-03-15 22:18:22] 2026-03-15 21:17:23,578 | INFO     | mean y: 2746259.625
[2026-03-15 22:18:22] 2026-03-15 21:17:23,578 | INFO     | intersect: -1245290155.8016748
[2026-03-15 22:18:22] 2026-03-15 21:17:23,578 | INFO     | chi2: 0.0006267320490662506
[2026-03-15 22:18:22] 2026-03-15 21:17:23,578 | INFO     | current memory leak: 0.70 B/s (using 24 data points, chi2=0.00)
[2026-03-15 22:18:22] 2026-03-15 21:17:23,579 | INFO     | could have reported an average CPU frequency of 3624 MHz (5 samples)
[2026-03-15 22:18:22] 2026-03-15 21:17:23,579 | INFO     | ..............................
[2026-03-15 22:18:22] 2026-03-15 21:17:23,579 | INFO     | . Timing measurements:
[2026-03-15 22:18:22] 2026-03-15 21:17:23,579 | INFO     | . get job = 0 s
[2026-03-15 22:18:22] 2026-03-15 21:17:23,579 | INFO     | . initial setup = 3 s
[2026-03-15 22:18:22] 2026-03-15 21:17:23,579 | INFO     | . payload setup = 4 s
[2026-03-15 22:18:22] 2026-03-15 21:17:23,579 | INFO     | . stage-in = 0 s
[2026-03-15 22:18:22] 2026-03-15 21:17:23,579 | INFO     | . payload execution = 1846 s
[2026-03-15 22:18:22] 2026-03-15 21:17:23,579 | INFO     | . stage-out = 0 s
[2026-03-15 22:18:22] 2026-03-15 21:17:23,579 | INFO     | . log creation = 0 s
[2026-03-15 22:18:22] 2026-03-15 21:17:23,579 | INFO     | ..............................
[2026-03-15 22:18:22] 2026-03-15 21:17:23,619 | INFO     | 
[2026-03-15 22:18:22] 2026-03-15 21:17:23,619 | INFO     | job summary report
[2026-03-15 22:18:22] 2026-03-15 21:17:23,620 | INFO     | --------------------------------------------------
[2026-03-15 22:18:22] 2026-03-15 21:17:23,620 | INFO     | PanDA job id: 7043830364
[2026-03-15 22:18:22] 2026-03-15 21:17:23,620 | INFO     | task id: 48966988
[2026-03-15 22:18:22] 2026-03-15 21:17:23,620 | INFO     | errors: (none)
[2026-03-15 22:18:22] 2026-03-15 21:17:23,620 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-15 22:18:22] 2026-03-15 21:17:23,620 | INFO     | pilot state: finished 
[2026-03-15 22:18:22] 2026-03-15 21:17:23,620 | INFO     | transexitcode: 0
[2026-03-15 22:18:22] 2026-03-15 21:17:23,620 | INFO     | exeerrorcode: 0
[2026-03-15 22:18:22] 2026-03-15 21:17:23,620 | INFO     | exeerrordiag: 
[2026-03-15 22:18:22] 2026-03-15 21:17:23,620 | INFO     | exitcode: 0
[2026-03-15 22:18:22] 2026-03-15 21:17:23,620 | INFO     | exitmsg: OK
[2026-03-15 22:18:22] 2026-03-15 21:17:23,620 | INFO     | cpuconsumptiontime: 19502 s
[2026-03-15 22:18:22] 2026-03-15 21:17:23,620 | INFO     | nevents: 400
[2026-03-15 22:18:22] 2026-03-15 21:17:23,620 | INFO     | neventsw: 0
[2026-03-15 22:18:22] 2026-03-15 21:17:23,620 | INFO     | pid: 367413
[2026-03-15 22:18:22] 2026-03-15 21:17:23,620 | INFO     | pgrp: 367413
[2026-03-15 22:18:22] 2026-03-15 21:17:23,620 | INFO     | corecount: 12
[2026-03-15 22:18:22] 2026-03-15 21:17:23,620 | INFO     | event service: False
[2026-03-15 22:18:22] 2026-03-15 21:17:23,620 | INFO     | sizes: {0: 2280282, 11: 2280282, 1854: 2305197, 1855: 2314273, 1857: 2314443}
[2026-03-15 22:18:22] 2026-03-15 21:17:23,620 | INFO     | --------------------------------------------------
[2026-03-15 22:18:22] 2026-03-15 21:17:23,620 | INFO     | 
[2026-03-15 22:18:22] 2026-03-15 21:17:23,620 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot96/slots/0
[2026-03-15 22:18:22] 2026-03-15 21:17:23,640 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-15 22:18:22] 2026-03-15 21:17:23,640 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-15 22:18:22] 2026-03-15 21:17:23,640 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-15 22:18:22] 2026-03-15 21:17:23,640 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-15 22:18:22] 2026-03-15 21:17:23,640 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-15 22:18:22] 2026-03-15 21:17:23,640 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-15 22:18:22] 2026-03-15 21:17:23,640 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-15 22:18:22] 2026-03-15 21:17:23,640 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-15 22:18:22] 2026-03-15 21:17:23,641 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-15 22:18:22] 2026-03-15 21:17:23,641 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-15 22:18:22] 2026-03-15 21:17:23,641 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-15 22:18:22] 2026-03-15 21:17:23,641 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-15 22:18:22] 2026-03-15 21:17:23,641 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-15 22:18:22] 2026-03-15 21:17:23,641 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-15 22:18:22] 2026-03-15 21:17:23,641 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-15 22:18:22] 2026-03-15 21:17:23,641 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-15 22:18:22] 2026-03-15 21:17:23,641 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-15 22:18:22] 2026-03-15 21:17:23,641 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-15 22:18:22] 2026-03-15 21:17:23,641 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-15 22:18:22] 2026-03-15 21:17:23,641 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-15 22:18:22] 2026-03-15 21:17:23,641 | INFO     | job 7043830364 has completed (purged errors)
[2026-03-15 22:18:22] 2026-03-15 21:17:23,641 | INFO     | overall cleanup function is called
[2026-03-15 22:18:22] 2026-03-15 21:17:24,648 | INFO     | --- collectZombieJob: --- 10, [367413]
[2026-03-15 22:18:22] 2026-03-15 21:17:24,648 | INFO     | zombie collector waiting for pid 367413
[2026-03-15 22:18:22] 2026-03-15 21:17:24,648 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-15 22:18:22] 2026-03-15 21:17:24,648 | INFO     | collected zombie processes
[2026-03-15 22:18:22] 2026-03-15 21:17:24,648 | INFO     | will attempt to kill all subprocesses of pid=367413
[2026-03-15 22:18:22] 2026-03-15 21:17:24,976 | INFO     | process IDs to be killed: [367413] (in reverse order)
[2026-03-15 22:18:22] 2026-03-15 21:17:25,121 | WARNING  | found no corresponding commands to process id(s)
[2026-03-15 22:18:22] 2026-03-15 21:17:25,121 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-15 22:18:22] 2026-03-15 21:17:25,143 | INFO     | did not find any defunct processes belonging to 367413
[2026-03-15 22:18:22] 2026-03-15 21:17:25,165 | INFO     | did not find any defunct processes belonging to 367413
[2026-03-15 22:18:22] 2026-03-15 21:17:25,165 | INFO     | ready for new job
[2026-03-15 22:18:22] 2026-03-15 21:17:25,165 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-15 22:18:22] 2026-03-15 21:17:25,166 | INFO     | **************************************
[2026-03-15 22:18:22] 2026-03-15 21:17:25,166 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-15 22:18:22] 2026-03-15 21:17:25,166 | INFO     | **************************************
[2026-03-15 22:18:22] 2026-03-15 21:17:25,166 | INFO     | 
[2026-03-15 22:18:22] 2026-03-15 21:17:25,171 | INFO     | architecture information:
[2026-03-15 22:18:22] 2026-03-15 21:17:25,171 | INFO     | executing command: cat /etc/os-release
[2026-03-15 22:18:22] 2026-03-15 21:17:25,183 | INFO     | cat /etc/os-release:
[2026-03-15 22:18:22] NAME="CentOS Linux"
[2026-03-15 22:18:22] VERSION="7 (Core)"
[2026-03-15 22:18:22] ID="centos"
[2026-03-15 22:18:22] ID_LIKE="rhel fedora"
[2026-03-15 22:18:22] VERSION_ID="7"
[2026-03-15 22:18:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-15 22:18:22] ANSI_COLOR="0;31"
[2026-03-15 22:18:22] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-15 22:18:22] HOME_URL="https://www.centos.org/"
[2026-03-15 22:18:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-15 22:18:22] 
[2026-03-15 22:18:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-15 22:18:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-15 22:18:22] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-15 22:18:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-15 22:18:22] 
[2026-03-15 22:18:22] 2026-03-15 21:17:25,183 | INFO     | **************************************
[2026-03-15 22:18:22] 2026-03-15 21:17:25,686 | INFO     | executing command: df -mP /var/lib/boinc/var/slot96/slots/0
[2026-03-15 22:18:22] 2026-03-15 21:17:25,699 | INFO     | sufficient remaining disk space (261567283200 B)
[2026-03-15 22:18:22] 2026-03-15 21:17:25,699 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-15 22:18:22] 2026-03-15 21:17:25,699 | INFO     | current server update state: UPDATING_FINAL
[2026-03-15 22:18:22] 2026-03-15 21:17:25,699 | INFO     | update_server=False
[2026-03-15 22:18:22] 2026-03-15 21:17:25,700 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-15 22:18:22] 2026-03-15 21:17:26,474 | INFO     | all payload control threads have been joined
[2026-03-15 22:18:22] 2026-03-15 21:17:26,579 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-15 22:18:22] 2026-03-15 21:17:26,579 | INFO     | aborting loop
[2026-03-15 22:18:22] 2026-03-15 21:17:26,612 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-15 22:18:22] 2026-03-15 21:17:26,705 | INFO     | [job] retrieve thread has finished
[2026-03-15 22:18:22] 2026-03-15 21:17:26,712 | INFO     | all data control threads have been joined
[2026-03-15 22:18:22] 2026-03-15 21:17:26,934 | INFO     | [job] validate thread has finished
[2026-03-15 22:18:22] 2026-03-15 21:17:27,045 | INFO     | [job] create_data_payload thread has finished
[2026-03-15 22:18:22] 2026-03-15 21:17:27,099 | INFO     | [payload] validate_pre thread has finished
[2026-03-15 22:18:22] 2026-03-15 21:17:27,114 | INFO     | [payload] execute_payloads thread has finished
[2026-03-15 22:18:22] 2026-03-15 21:17:27,358 | INFO     | all job control threads have been joined
[2026-03-15 22:18:22] 2026-03-15 21:17:27,371 | INFO     | [data] copytool_in thread has finished
[2026-03-15 22:18:22] 2026-03-15 21:17:27,374 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-15 22:18:22] 2026-03-15 21:17:27,480 | INFO     | [payload] control thread has finished
[2026-03-15 22:18:22] 2026-03-15 21:17:27,554 | INFO     | [payload] validate_post thread has finished
[2026-03-15 22:18:22] 2026-03-15 21:17:27,585 | INFO     | [job] job monitor thread has finished
[2026-03-15 22:18:22] 2026-03-15 21:17:27,668 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-15 22:18:22] 2026-03-15 21:17:27,717 | INFO     | [data] control thread has finished
[2026-03-15 22:18:22] 2026-03-15 21:17:28,018 | INFO     | [payload] failed_post thread has finished
[2026-03-15 22:18:22] 2026-03-15 21:17:28,360 | INFO     | [job] control thread has finished
[2026-03-15 22:18:22] 2026-03-15 21:17:28,617 | INFO     | [data] copytool_out thread has finished
[2026-03-15 22:18:22] 2026-03-15 21:17:28,628 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-15 22:18:22] 2026-03-15 21:17:29,634 | INFO     | [job] queue monitor thread has finished
[2026-03-15 22:18:22] 2026-03-15 21:17:31,379 | INFO     | [data] queue_monitor thread has finished
[2026-03-15 22:18:22] 2026-03-15 21:17:55,847 | INFO     | PID=347623 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-15 22:18:22] 2026-03-15 21:17:55,847 | INFO     | .. there are 11 such processes running
[2026-03-15 22:18:22] 2026-03-15 21:17:55,848 | INFO     | found 0 job(s) in 20 queues
[2026-03-15 22:18:22] 2026-03-15 21:17:55,848 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-15 22:18:22] 2026-03-15 21:17:55,848 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-15 22:18:22] 2026-03-15 21:18:17,190 | INFO     | [monitor] cgroup control has ended
[2026-03-15 22:18:22] 2026-03-15 21:18:17,407 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23425866946368)>', '<ExcThread(monitor, started 23425556936448)>']
[2026-03-15 22:18:22] 2026-03-15 21:18:17,958 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-15 22:18:22] 2026-03-15 21:18:17,959 | INFO     | [monitor] control thread has ended
[2026-03-15 22:18:22] 2026-03-15 21:18:22,433 | INFO     | all workflow threads have been joined
[2026-03-15 22:18:22] 2026-03-15 21:18:22,433 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-15 22:18:22] 2026-03-15 21:18:22,433 | INFO     | traces error code: 0
[2026-03-15 22:18:22] 2026-03-15 21:18:22,433 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-15 22:18:22] 2026-03-15 21:18:22,573 [wrapper] ==== pilot stdout END ====
[2026-03-15 22:18:22] 2026-03-15 21:18:22,577 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-15 22:18:22] 2026-03-15 21:18:22,579 [wrapper] pilotpid: 347623
[2026-03-15 22:18:22] 2026-03-15 21:18:22,581 [wrapper] Pilot exit status: 0
[2026-03-15 22:18:22] 2026-03-15 21:18:22,589 [wrapper] pandaids: 7043830364
[2026-03-15 22:18:22] 2026-03-15 21:18:22,689 [wrapper] cleanup supervisor_pilot  482804 347624
[2026-03-15 22:18:22] 2026-03-15 21:18:22,691 [wrapper] Test setup, not cleaning
[2026-03-15 22:18:22] 2026-03-15 21:18:22,694 [wrapper] apfmon messages muted
[2026-03-15 22:18:22] 2026-03-15 21:18:22,696 [wrapper] ==== wrapper stdout END ====
[2026-03-15 22:18:22] 2026-03-15 21:18:22,698 [wrapper] ==== wrapper stderr END ====
[2026-03-15 22:18:22]  *** Error codes and diagnostics ***
[2026-03-15 22:18:22]     "exeErrorCode": 0,
[2026-03-15 22:18:22]     "exeErrorDiag": "",
[2026-03-15 22:18:22]     "pilotErrorCode": 0,
[2026-03-15 22:18:22]     "pilotErrorDiag": "",
[2026-03-15 22:18:22]  *** Listing of results directory ***
[2026-03-15 22:18:22] total 397948
[2026-03-15 22:18:22] -rw-r--r--. 1 boinc boinc    584627 Mar  7 00:36 pilot3.tar.gz
[2026-03-15 22:18:22] -rwx------. 1 boinc boinc     36322 Mar  7 00:39 runpilot2-wrapper.sh
[2026-03-15 22:18:22] -rw-r--r--. 1 boinc boinc      5111 Mar  7 00:39 queuedata.json
[2026-03-15 22:18:22] -rw-r--r--. 1 boinc boinc       100 Mar 15 21:46 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-15 22:18:22] -rwxr-xr-x. 1 boinc boinc      7986 Mar 15 21:46 run_atlas
[2026-03-15 22:18:22] -rw-r--r--. 1 boinc boinc       105 Mar 15 21:46 job.xml
[2026-03-15 22:18:22] -rw-r--r--. 1 boinc boinc      6707 Mar 15 21:46 init_data.xml
[2026-03-15 22:18:22] -rw-r--r--. 2 boinc boinc 211856462 Mar 15 21:46 EVNT.48966985._000484.pool.root.1
[2026-03-15 22:18:22] -rw-r--r--. 2 boinc boinc     15845 Mar 15 21:46 start_atlas.sh
[2026-03-15 22:18:22] drwxrwx--x. 2 boinc boinc      4096 Mar 15 21:46 shared
[2026-03-15 22:18:22] -rw-r--r--. 2 boinc boinc    597960 Mar 15 21:46 input.tar.gz
[2026-03-15 22:18:22] -rw-r--r--. 1 boinc boinc         0 Mar 15 21:46 boinc_lockfile
[2026-03-15 22:18:22] -rw-r--r--. 1 boinc boinc      2592 Mar 15 21:46 pandaJob.out
[2026-03-15 22:18:22] -rw-------. 1 boinc boinc   1006454 Mar 15 21:46 agis_schedconf.cvmfs.json
[2026-03-15 22:18:22] -rw-------. 1 boinc boinc   1511579 Mar 15 21:46 agis_ddmendpoints.agis.ALL.json
[2026-03-15 22:18:22] -rw-------. 1 boinc boinc       443 Mar 15 21:46 workernode_map.json
[2026-03-15 22:18:22] drwx------. 5 boinc boinc      4096 Mar 15 21:46 pilot3
[2026-03-15 22:18:22] -rw-------. 1 boinc boinc 190373047 Mar 15 22:16 HITS.48966988._012106.pool.root.1
[2026-03-15 22:18:22] -rw-r--r--. 1 boinc boinc       529 Mar 15 22:16 boinc_task_state.xml
[2026-03-15 22:18:22] -rw-------. 1 boinc boinc      1022 Mar 15 22:17 memory_monitor_summary.json
[2026-03-15 22:18:22] -rw-------. 1 boinc boinc    355039 Mar 15 22:17 log.48966988._012106.job.log.tgz.1
[2026-03-15 22:18:22] -rw-------. 1 boinc boinc      6351 Mar 15 22:17 heartbeat.json
[2026-03-15 22:18:22] -rw-------. 1 boinc boinc        95 Mar 15 22:17 pilot_heartbeat.json
[2026-03-15 22:18:22] -rw-r--r--. 1 boinc boinc      8192 Mar 15 22:18 boinc_mmap_file
[2026-03-15 22:18:22] -rw-r--r--. 1 boinc boinc        27 Mar 15 22:18 wrapper_checkpoint.txt
[2026-03-15 22:18:22] -rw-------. 1 boinc boinc      4829 Mar 15 22:18 pilotlog.txt
[2026-03-15 22:18:22] -rw-------. 1 boinc boinc    311092 Mar 15 22:18 log.48966988._012106.job.log.1
[2026-03-15 22:18:22] -rw-------. 1 boinc boinc       357 Mar 15 22:18 output.list
[2026-03-15 22:18:22] -rw-r--r--. 1 boinc boinc       620 Mar 15 22:18 runtime_log
[2026-03-15 22:18:22] -rw-------. 1 boinc boinc    686080 Mar 15 22:18 result.tar.gz
[2026-03-15 22:18:22] -rw-r--r--. 1 boinc boinc      9206 Mar 15 22:18 runtime_log.err
[2026-03-15 22:18:22] -rw-------. 1 boinc boinc       659 Mar 15 22:18 XYDNDmcwtI9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmU0TLDmGWw7Km.diag
[2026-03-15 22:18:22] -rw-r--r--. 1 boinc boinc     21300 Mar 15 22:18 stderr.txt
[2026-03-15 22:18:22] HITS file was successfully produced:
[2026-03-15 22:18:22] -rw-------. 1 boinc boinc 190373047 Mar 15 22:16 shared/HITS.pool.root.1
[2026-03-15 22:18:22]  *** Contents of shared directory: ***
[2026-03-15 22:18:22] total 394084
[2026-03-15 22:18:22] -rw-r--r--. 2 boinc boinc 211856462 Mar 15 21:46 ATLAS.root_0
[2026-03-15 22:18:22] -rw-r--r--. 2 boinc boinc     15845 Mar 15 21:46 start_atlas.sh
[2026-03-15 22:18:22] -rw-r--r--. 2 boinc boinc    597960 Mar 15 21:46 input.tar.gz
[2026-03-15 22:18:22] -rw-------. 1 boinc boinc 190373047 Mar 15 22:16 HITS.pool.root.1
[2026-03-15 22:18:22] -rw-------. 1 boinc boinc    686080 Mar 15 22:18 result.tar.gz
22:18:24 (335031): run_atlas exited; CPU time 19553.691341
22:18:24 (335031): called boinc_finish(0)

</stderr_txt>
]]>

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