Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:34:52 (1388193): wrapper (7.7.26015): starting
03:34:52 (1388193): wrapper: running run_atlas (--nthreads 4)
[2026-03-16 03:34:52] Arguments: --nthreads 4
[2026-03-16 03:34:52] Threads: 4
[2026-03-16 03:34:52] Checking for CVMFS
[2026-03-16 03:34:52] No cvmfs_config command found, will try listing directly
[2026-03-16 03:34:52] CVMFS is ok
[2026-03-16 03:34:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-16 03:34:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-16 03:34:52] Further information can be found at the LHC@home message board.
[2026-03-16 03:34:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-16 03:34:52] Checking for apptainer binary...
[2026-03-16 03:34:52] which: no apptainer in ((null))
[2026-03-16 03:34:52] apptainer is not installed, using version from CVMFS
[2026-03-16 03:34:52] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-16 03:34:53] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot220/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut25.grid.cesnet.cz
[2026-03-16 03:34:53] apptainer works
[2026-03-16 03:34:53] Set ATHENA_PROC_NUMBER=4
[2026-03-16 03:34:53] Set ATHENA_CORE_NUMBER=4
[2026-03-16 03:34:53] Starting ATLAS job with PandaID=7045287352
[2026-03-16 03:34:53] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot220/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-16 04:41:15]  *** The last 200 lines of the pilot log: ***
[2026-03-16 04:41:15]  status=None
[2026-03-16 04:41:15]  status_code=0
[2026-03-16 04:41:15]  storage_token=
[2026-03-16 04:41:15]  surl=/var/lib/boinc/var/slot220/slots/0/PanDA_Pilot-7045287352/log.48955010._035641.job.log.tgz.1
[2026-03-16 04:41:15]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/88/41/log.48955010._035641.job.log.tgz.1
[2026-03-16 04:41:15]  workdir=None
[2026-03-16 04:41:15] ]
[2026-03-16 04:41:15] 2026-03-16 03:40:07,636 | INFO     | transferring file log.48955010._035641.job.log.tgz.1 from /var/lib/boinc/var/slot220/slots/0/PanDA_Pilot-7045287352/log.48955010._035641.job.log.tgz.1 to /var/lib/
[2026-03-16 04:41:15] 2026-03-16 03:40:07,636 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot220/slots/0/PanDA_Pilot-7045287352/log.48955010._035641.job.log.tgz.1 /var/lib/boinc/var/slot220/slots/0/
[2026-03-16 04:41:15] 2026-03-16 03:40:07,653 | INFO     | adding to output.list: log.48955010._035641.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/88/41/log.48955010._035641.job.log.tg
[2026-03-16 04:41:15] 2026-03-16 03:40:07,654 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-16 04:41:15] 2026-03-16 03:40:07,654 | INFO     | summary of transferred files:
[2026-03-16 04:41:15] 2026-03-16 03:40:07,654 | INFO     |  -- lfn=log.48955010._035641.job.log.tgz.1, status_code=0, status=transferred
[2026-03-16 04:41:15] 2026-03-16 03:40:07,654 | INFO     | stage-out finished correctly
[2026-03-16 04:41:15] 2026-03-16 03:40:09,253 | INFO     | time since job start (3906s) is within the limit (345600.0s)
[2026-03-16 04:41:15] 2026-03-16 03:40:09,727 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-16 04:41:15] 2026-03-16 03:40:10,823 | INFO     | job 7045287352 has state=finished
[2026-03-16 04:41:15] 2026-03-16 03:40:10,823 | INFO     | preparing for final server update for job 7045287352 in state='finished'
[2026-03-16 04:41:15] 2026-03-16 03:40:10,823 | INFO     | reading metadata from: /var/lib/boinc/var/slot220/slots/0/PanDA_Pilot-7045287352/jobReport.json
[2026-03-16 04:41:15] 2026-03-16 03:40:10,825 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot220/slots/0/workernode_map.json
[2026-03-16 04:41:15] 2026-03-16 03:40:10,825 | INFO     | this job has now completed (state=finished)
[2026-03-16 04:41:15] 2026-03-16 03:40:10,825 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-16 04:41:15] 2026-03-16 03:40:10,825 | INFO     | log transfer has been attempted: DONE
[2026-03-16 04:41:15] 2026-03-16 03:40:10,825 | INFO     | job 7045287352 has finished - writing final server update
[2026-03-16 04:41:15] 2026-03-16 03:40:10,826 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_913162/.job.ad'
[2026-03-16 04:41:15] 2026-03-16 03:40:10,826 | INFO     | total number of processed events: 400 (read)
[2026-03-16 04:41:15] 2026-03-16 03:40:10,843 | INFO     | using path: /var/lib/boinc/var/slot220/slots/0/PanDA_Pilot-7045287352/memory_monitor_summary.json (trf name=prmon)
[2026-03-16 04:41:15] 2026-03-16 03:40:10,843 | INFO     | extracted standard info from prmon json
[2026-03-16 04:41:15] 2026-03-16 03:40:10,843 | INFO     | extracted standard memory fields from prmon json
[2026-03-16 04:41:15] 2026-03-16 03:40:10,843 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-16 04:41:15] 2026-03-16 03:40:10,843 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-16 04:41:15] 2026-03-16 03:40:10,843 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-16 04:41:15] 2026-03-16 03:40:10,844 | INFO     | fitting pss+swap vs Time
[2026-03-16 04:41:15] 2026-03-16 03:40:10,844 | INFO     | sum of square deviations: 57407588.0
[2026-03-16 04:41:15] 2026-03-16 03:40:10,844 | INFO     | sum of deviations: -493679344.0
[2026-03-16 04:41:15] 2026-03-16 03:40:10,845 | INFO     | mean x: 1773630536.0
[2026-03-16 04:41:15] 2026-03-16 03:40:10,845 | INFO     | mean y: 2345849.403508772
[2026-03-16 04:41:15] 2026-03-16 03:40:10,845 | INFO     | intersect: 15254767872.618427
[2026-03-16 04:41:15] 2026-03-16 03:40:10,845 | INFO     | chi2: 0.000959565730719907
[2026-03-16 04:41:15] 2026-03-16 03:40:10,845 | INFO     | current memory leak: -8.60 B/s (using 57 data points, chi2=0.00)
[2026-03-16 04:41:15] 2026-03-16 03:40:10,845 | INFO     | could have reported an average CPU frequency of 3645 MHz (6 samples)
[2026-03-16 04:41:15] 2026-03-16 03:40:10,845 | INFO     | ..............................
[2026-03-16 04:41:15] 2026-03-16 03:40:10,845 | INFO     | . Timing measurements:
[2026-03-16 04:41:15] 2026-03-16 03:40:10,845 | INFO     | . get job = 0 s
[2026-03-16 04:41:15] 2026-03-16 03:40:10,845 | INFO     | . initial setup = 4 s
[2026-03-16 04:41:15] 2026-03-16 03:40:10,845 | INFO     | . payload setup = 4 s
[2026-03-16 04:41:15] 2026-03-16 03:40:10,845 | INFO     | . stage-in = 0 s
[2026-03-16 04:41:15] 2026-03-16 03:40:10,845 | INFO     | . payload execution = 3885 s
[2026-03-16 04:41:15] 2026-03-16 03:40:10,845 | INFO     | . stage-out = 0 s
[2026-03-16 04:41:15] 2026-03-16 03:40:10,845 | INFO     | . log creation = 0 s
[2026-03-16 04:41:15] 2026-03-16 03:40:10,845 | INFO     | ..............................
[2026-03-16 04:41:15] 2026-03-16 03:40:10,893 | INFO     | 
[2026-03-16 04:41:15] 2026-03-16 03:40:10,893 | INFO     | job summary report
[2026-03-16 04:41:15] 2026-03-16 03:40:10,893 | INFO     | --------------------------------------------------
[2026-03-16 04:41:15] 2026-03-16 03:40:10,893 | INFO     | PanDA job id: 7045287352
[2026-03-16 04:41:15] 2026-03-16 03:40:10,893 | INFO     | task id: 48955010
[2026-03-16 04:41:15] 2026-03-16 03:40:10,893 | INFO     | errors: (none)
[2026-03-16 04:41:15] 2026-03-16 03:40:10,893 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-16 04:41:15] 2026-03-16 03:40:10,893 | INFO     | pilot state: finished 
[2026-03-16 04:41:15] 2026-03-16 03:40:10,893 | INFO     | transexitcode: 0
[2026-03-16 04:41:15] 2026-03-16 03:40:10,893 | INFO     | exeerrorcode: 0
[2026-03-16 04:41:15] 2026-03-16 03:40:10,893 | INFO     | exeerrordiag: 
[2026-03-16 04:41:15] 2026-03-16 03:40:10,893 | INFO     | exitcode: 0
[2026-03-16 04:41:15] 2026-03-16 03:40:10,893 | INFO     | exitmsg: OK
[2026-03-16 04:41:15] 2026-03-16 03:40:10,893 | INFO     | cpuconsumptiontime: 14838 s
[2026-03-16 04:41:15] 2026-03-16 03:40:10,893 | INFO     | nevents: 400
[2026-03-16 04:41:15] 2026-03-16 03:40:10,893 | INFO     | neventsw: 0
[2026-03-16 04:41:15] 2026-03-16 03:40:10,893 | INFO     | pid: 1398872
[2026-03-16 04:41:15] 2026-03-16 03:40:10,893 | INFO     | pgrp: 1398872
[2026-03-16 04:41:15] 2026-03-16 03:40:10,893 | INFO     | corecount: 4
[2026-03-16 04:41:15] 2026-03-16 03:40:10,893 | INFO     | event service: False
[2026-03-16 04:41:15] 2026-03-16 03:40:10,893 | INFO     | sizes: {0: 2279702, 1: 2280219, 11: 2280219, 3893: 2315147, 3895: 2315147, 3897: 2315341}
[2026-03-16 04:41:15] 2026-03-16 03:40:10,893 | INFO     | --------------------------------------------------
[2026-03-16 04:41:15] 2026-03-16 03:40:10,893 | INFO     | 
[2026-03-16 04:41:15] 2026-03-16 03:40:10,894 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot220/slots/0
[2026-03-16 04:41:15] 2026-03-16 03:40:10,912 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-16 04:41:15] 2026-03-16 03:40:10,912 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-16 04:41:15] 2026-03-16 03:40:10,912 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-16 04:41:15] 2026-03-16 03:40:10,912 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-16 04:41:15] 2026-03-16 03:40:10,912 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-16 04:41:15] 2026-03-16 03:40:10,912 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-16 04:41:15] 2026-03-16 03:40:10,912 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-16 04:41:15] 2026-03-16 03:40:10,912 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-16 04:41:15] 2026-03-16 03:40:10,912 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-16 04:41:15] 2026-03-16 03:40:10,913 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-16 04:41:15] 2026-03-16 03:40:10,913 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-16 04:41:15] 2026-03-16 03:40:10,913 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-16 04:41:15] 2026-03-16 03:40:10,913 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-16 04:41:15] 2026-03-16 03:40:10,913 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-16 04:41:15] 2026-03-16 03:40:10,913 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-16 04:41:15] 2026-03-16 03:40:10,913 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-16 04:41:15] 2026-03-16 03:40:10,913 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-16 04:41:15] 2026-03-16 03:40:10,913 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-16 04:41:15] 2026-03-16 03:40:10,913 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-16 04:41:15] 2026-03-16 03:40:10,913 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-16 04:41:15] 2026-03-16 03:40:10,913 | INFO     | job 7045287352 has completed (purged errors)
[2026-03-16 04:41:15] 2026-03-16 03:40:10,913 | INFO     | overall cleanup function is called
[2026-03-16 04:41:15] 2026-03-16 03:40:11,920 | INFO     | --- collectZombieJob: --- 10, [1398872]
[2026-03-16 04:41:15] 2026-03-16 03:40:11,920 | INFO     | zombie collector waiting for pid 1398872
[2026-03-16 04:41:15] 2026-03-16 03:40:11,920 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-16 04:41:15] 2026-03-16 03:40:11,920 | INFO     | collected zombie processes
[2026-03-16 04:41:15] 2026-03-16 03:40:11,920 | INFO     | will attempt to kill all subprocesses of pid=1398872
[2026-03-16 04:41:15] 2026-03-16 03:40:12,312 | INFO     | process IDs to be killed: [1398872] (in reverse order)
[2026-03-16 04:41:15] 2026-03-16 03:40:12,484 | WARNING  | found no corresponding commands to process id(s)
[2026-03-16 04:41:15] 2026-03-16 03:40:12,484 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-16 04:41:15] 2026-03-16 03:40:12,510 | INFO     | did not find any defunct processes belonging to 1398872
[2026-03-16 04:41:15] 2026-03-16 03:40:12,531 | INFO     | did not find any defunct processes belonging to 1398872
[2026-03-16 04:41:15] 2026-03-16 03:40:12,531 | INFO     | ready for new job
[2026-03-16 04:41:15] 2026-03-16 03:40:12,531 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-16 04:41:15] 2026-03-16 03:40:12,532 | INFO     | **************************************
[2026-03-16 04:41:15] 2026-03-16 03:40:12,535 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-16 04:41:15] 2026-03-16 03:40:12,535 | INFO     | **************************************
[2026-03-16 04:41:15] 2026-03-16 03:40:12,535 | INFO     | 
[2026-03-16 04:41:15] 2026-03-16 03:40:12,540 | INFO     | architecture information:
[2026-03-16 04:41:15] 2026-03-16 03:40:12,540 | INFO     | executing command: cat /etc/os-release
[2026-03-16 04:41:15] 2026-03-16 03:40:12,555 | INFO     | cat /etc/os-release:
[2026-03-16 04:41:15] NAME="CentOS Linux"
[2026-03-16 04:41:15] VERSION="7 (Core)"
[2026-03-16 04:41:15] ID="centos"
[2026-03-16 04:41:15] ID_LIKE="rhel fedora"
[2026-03-16 04:41:15] VERSION_ID="7"
[2026-03-16 04:41:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-16 04:41:15] ANSI_COLOR="0;31"
[2026-03-16 04:41:15] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-16 04:41:15] HOME_URL="https://www.centos.org/"
[2026-03-16 04:41:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-16 04:41:15] 
[2026-03-16 04:41:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-16 04:41:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-16 04:41:15] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-16 04:41:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-16 04:41:15] 
[2026-03-16 04:41:15] 2026-03-16 03:40:12,555 | INFO     | **************************************
[2026-03-16 04:41:15] 2026-03-16 03:40:13,058 | INFO     | executing command: df -mP /var/lib/boinc/var/slot220/slots/0
[2026-03-16 04:41:15] 2026-03-16 03:40:13,073 | INFO     | sufficient remaining disk space (240567451648 B)
[2026-03-16 04:41:15] 2026-03-16 03:40:13,073 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-16 04:41:15] 2026-03-16 03:40:13,074 | INFO     | current server update state: UPDATING_FINAL
[2026-03-16 04:41:15] 2026-03-16 03:40:13,074 | INFO     | update_server=False
[2026-03-16 04:41:15] 2026-03-16 03:40:13,074 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-16 04:41:15] 2026-03-16 03:40:13,091 | INFO     | all data control threads have been joined
[2026-03-16 04:41:15] 2026-03-16 03:40:13,210 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-16 04:41:15] 2026-03-16 03:40:13,738 | INFO     | all payload control threads have been joined
[2026-03-16 04:41:15] 2026-03-16 03:40:13,777 | WARNING  | process 1398872 can no longer be monitored (due to stat problems) - aborting
[2026-03-16 04:41:15] 2026-03-16 03:40:14,070 | INFO     | using path: /var/lib/boinc/var/slot220/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-16 04:41:15] 2026-03-16 03:40:14,070 | INFO     | using path: /var/lib/boinc/var/slot220/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-16 04:41:15] 2026-03-16 03:40:14,071 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-03-16 04:41:15] 2026-03-16 03:40:14,071 | WARNING  | maxPSS not found in memory monitor output
[2026-03-16 04:41:15] 2026-03-16 03:40:14,071 | INFO     | skipping file size check of payload stdout file (/var/lib/boinc/var/slot220/slots/0/PanDA_Pilot-7045287352/payload.stdout) since it has not been created yet
[2026-03-16 04:41:15] 2026-03-16 03:40:14,071 | INFO     | executing command: df -mP /var/lib/boinc/var/slot220/slots/0
[2026-03-16 04:41:15] 2026-03-16 03:40:14,079 | INFO     | [job] retrieve thread has finished
[2026-03-16 04:41:15] 2026-03-16 03:40:14,084 | INFO     | sufficient remaining disk space (240566403072 B)
[2026-03-16 04:41:15] 2026-03-16 03:40:14,084 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-03-16 04:41:15] 2026-03-16 03:40:14,084 | INFO     | output file size check: skipping output file /var/lib/boinc/var/slot220/slots/0/PanDA_Pilot-7045287352/HITS.48955010._035641.pool.root.1 since it does not exist
[2026-03-16 04:41:15] 2026-03-16 03:40:14,092 | INFO     | [data] control thread has finished
[2026-03-16 04:41:15] 2026-03-16 03:40:14,098 | INFO     | all job control threads have been joined
[2026-03-16 04:41:15] 2026-03-16 03:40:14,157 | INFO     | [payload] execute_payloads thread has finished
[2026-03-16 04:41:15] 2026-03-16 03:40:14,292 | INFO     | [job] validate thread has finished
[2026-03-16 04:41:15] 2026-03-16 03:40:14,421 | INFO     | [job] create_data_payload thread has finished
[2026-03-16 04:41:15] 2026-03-16 03:40:14,482 | INFO     | number of running child processes to parent process 1398872: 1
[2026-03-16 04:41:15] 2026-03-16 03:40:14,482 | INFO     | maximum number of monitored processes: 6
[2026-03-16 04:41:15] 2026-03-16 03:40:14,482 | INFO     | aborting job monitoring since job object (job id=7045287352) has expired
[2026-03-16 04:41:15] 2026-03-16 03:40:14,483 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-16 04:41:15] 2026-03-16 03:40:14,483 | INFO     | will abort loop
[2026-03-16 04:41:15] 2026-03-16 03:40:14,607 | INFO     | [payload] validate_post thread has finished
[2026-03-16 04:41:15] 2026-03-16 03:40:14,638 | INFO     | [payload] validate_pre thread has finished
[2026-03-16 04:41:15] 2026-03-16 03:40:14,744 | INFO     | [payload] control thread has finished
[2026-03-16 04:41:15] 2026-03-16 03:40:14,795 | INFO     | [data] copytool_in thread has finished
[2026-03-16 04:41:15] 2026-03-16 03:40:15,103 | INFO     | [job] control thread has finished
[2026-03-16 04:41:15] 2026-03-16 03:40:15,215 | INFO     | [data] copytool_out thread has finished
[2026-03-16 04:41:15] 2026-03-16 03:40:15,487 | INFO     | [job] job monitor thread has finished
[2026-03-16 04:41:15] 2026-03-16 03:40:15,585 | INFO     | [payload] failed_post thread has finished
[2026-03-16 04:41:15] 2026-03-16 03:40:15,780 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-16 04:41:15] 2026-03-16 03:40:15,899 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-16 04:41:15] 2026-03-16 03:40:16,905 | INFO     | [job] queue monitor thread has finished
[2026-03-16 04:41:15] 2026-03-16 03:40:19,786 | INFO     | [data] queue_monitor thread has finished
[2026-03-16 04:41:15] 2026-03-16 03:40:24,025 | INFO     | job.realtimelogging is not enabled
[2026-03-16 04:41:15] 2026-03-16 03:40:25,030 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-16 04:41:15] 2026-03-16 03:40:42,818 | INFO     | PID=1392767 has CPU usage=7.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-16 04:41:15] 2026-03-16 03:40:42,818 | INFO     | .. there are 29 such processes running
[2026-03-16 04:41:15] 2026-03-16 03:40:42,819 | INFO     | found 0 job(s) in 20 queues
[2026-03-16 04:41:15] 2026-03-16 03:40:42,819 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-16 04:41:15] 2026-03-16 03:40:42,819 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-16 04:41:15] 2026-03-16 03:41:08,876 | INFO     | [monitor] cgroup control has ended
[2026-03-16 04:41:15] 2026-03-16 03:41:10,312 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22826284795712)>', '<ExcThread(monitor, started 22826041214720)>']
[2026-03-16 04:41:15] 2026-03-16 03:41:10,949 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-16 04:41:15] 2026-03-16 03:41:10,949 | INFO     | [monitor] control thread has ended
[2026-03-16 04:41:15] 2026-03-16 03:41:15,314 | INFO     | all workflow threads have been joined
[2026-03-16 04:41:15] 2026-03-16 03:41:15,314 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-16 04:41:15] 2026-03-16 03:41:15,314 | INFO     | traces error code: 0
[2026-03-16 04:41:15] 2026-03-16 03:41:15,314 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-16 04:41:15] 2026-03-16 03:41:15,475 [wrapper] ==== pilot stdout END ====
[2026-03-16 04:41:15] 2026-03-16 03:41:15,477 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-16 04:41:15] 2026-03-16 03:41:15,480 [wrapper] pilotpid: 1392767
[2026-03-16 04:41:15] 2026-03-16 03:41:15,482 [wrapper] Pilot exit status: 0
[2026-03-16 04:41:15] 2026-03-16 03:41:15,491 [wrapper] pandaids: 7045287352
[2026-03-16 04:41:15] 2026-03-16 03:41:15,606 [wrapper] cleanup supervisor_pilot 1653872 1392768
[2026-03-16 04:41:15] 2026-03-16 03:41:15,609 [wrapper] Test setup, not cleaning
[2026-03-16 04:41:15] 2026-03-16 03:41:15,611 [wrapper] apfmon messages muted
[2026-03-16 04:41:15] 2026-03-16 03:41:15,613 [wrapper] ==== wrapper stdout END ====
[2026-03-16 04:41:15] 2026-03-16 03:41:15,615 [wrapper] ==== wrapper stderr END ====
[2026-03-16 04:41:15]  *** Error codes and diagnostics ***
[2026-03-16 04:41:15]     "exeErrorCode": 0,
[2026-03-16 04:41:15]     "exeErrorDiag": "",
[2026-03-16 04:41:15]     "pilotErrorCode": 0,
[2026-03-16 04:41:15]     "pilotErrorDiag": "",
[2026-03-16 04:41:15]  *** Listing of results directory ***
[2026-03-16 04:41:15] total 612740
[2026-03-16 04:41:15] -rw-r--r--. 1 boinc boinc    585013 Mar 14 00:38 pilot3.tar.gz
[2026-03-16 04:41:15] -rwx------. 1 boinc boinc     36322 Mar 14 00:38 runpilot2-wrapper.sh
[2026-03-16 04:41:15] -rw-r--r--. 1 boinc boinc      5111 Mar 14 00:39 queuedata.json
[2026-03-16 04:41:15] -rw-r--r--. 1 boinc boinc       100 Mar 16 03:34 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-16 04:41:15] -rwxr-xr-x. 1 boinc boinc      7986 Mar 16 03:34 run_atlas
[2026-03-16 04:41:15] -rw-r--r--. 1 boinc boinc       105 Mar 16 03:34 job.xml
[2026-03-16 04:41:15] -rw-r--r--. 1 boinc boinc      6709 Mar 16 03:34 init_data.xml
[2026-03-16 04:41:15] -rw-r--r--. 2 boinc boinc 438900813 Mar 16 03:34 EVNT.46701403._001708.pool.root.1
[2026-03-16 04:41:15] -rw-r--r--. 2 boinc boinc     15845 Mar 16 03:34 start_atlas.sh
[2026-03-16 04:41:15] drwxrwx--x. 2 boinc boinc      4096 Mar 16 03:34 shared
[2026-03-16 04:41:15] -rw-r--r--. 2 boinc boinc    597533 Mar 16 03:34 input.tar.gz
[2026-03-16 04:41:15] -rw-r--r--. 1 boinc boinc         0 Mar 16 03:34 boinc_lockfile
[2026-03-16 04:41:15] -rw-r--r--. 1 boinc boinc      2563 Mar 16 03:34 pandaJob.out
[2026-03-16 04:41:15] -rw-------. 1 boinc boinc   1006471 Mar 16 03:34 agis_schedconf.cvmfs.json
[2026-03-16 04:41:15] -rw-------. 1 boinc boinc   1511579 Mar 16 03:34 agis_ddmendpoints.agis.ALL.json
[2026-03-16 04:41:15] -rw-------. 1 boinc boinc       444 Mar 16 03:35 workernode_map.json
[2026-03-16 04:41:15] drwx------. 5 boinc boinc      4096 Mar 16 03:35 pilot3
[2026-03-16 04:41:15] -rw-------. 1 boinc boinc 182943142 Mar 16 04:39 HITS.48955010._035641.pool.root.1
[2026-03-16 04:41:15] -rw-------. 1 boinc boinc      1023 Mar 16 04:40 memory_monitor_summary.json
[2026-03-16 04:41:15] -rw-r--r--. 1 boinc boinc       530 Mar 16 04:40 boinc_task_state.xml
[2026-03-16 04:41:15] -rw-------. 1 boinc boinc    243527 Mar 16 04:40 log.48955010._035641.job.log.tgz.1
[2026-03-16 04:41:15] -rw-------. 1 boinc boinc      6346 Mar 16 04:40 heartbeat.json
[2026-03-16 04:41:15] -rw-------. 1 boinc boinc        95 Mar 16 04:40 pilot_heartbeat.json
[2026-03-16 04:41:15] -rw-r--r--. 1 boinc boinc      8192 Mar 16 04:41 boinc_mmap_file
[2026-03-16 04:41:15] -rw-r--r--. 1 boinc boinc        27 Mar 16 04:41 wrapper_checkpoint.txt
[2026-03-16 04:41:15] -rw-------. 1 boinc boinc      6449 Mar 16 04:41 pilotlog.txt
[2026-03-16 04:41:15] -rw-------. 1 boinc boinc    586104 Mar 16 04:41 log.48955010._035641.job.log.1
[2026-03-16 04:41:15] -rw-------. 1 boinc boinc       357 Mar 16 04:41 output.list
[2026-03-16 04:41:15] -rw-r--r--. 1 boinc boinc       620 Mar 16 04:41 runtime_log
[2026-03-16 04:41:15] -rw-------. 1 boinc boinc    849920 Mar 16 04:41 result.tar.gz
[2026-03-16 04:41:15] -rw-r--r--. 1 boinc boinc      9221 Mar 16 04:41 runtime_log.err
[2026-03-16 04:41:15] -rw-------. 1 boinc boinc       661 Mar 16 04:41 hA0KDmkGRL9n9Rq4apOajLDm4fhM0noT9bVooX4SDmHaoLDmMVzj4m.diag
[2026-03-16 04:41:15] -rw-r--r--. 1 boinc boinc     22103 Mar 16 04:41 stderr.txt
[2026-03-16 04:41:15] HITS file was successfully produced:
[2026-03-16 04:41:15] -rw-------. 1 boinc boinc 182943142 Mar 16 04:39 shared/HITS.pool.root.1
[2026-03-16 04:41:15]  *** Contents of shared directory: ***
[2026-03-16 04:41:15] total 608712
[2026-03-16 04:41:15] -rw-r--r--. 2 boinc boinc 438900813 Mar 16 03:34 ATLAS.root_0
[2026-03-16 04:41:15] -rw-r--r--. 2 boinc boinc     15845 Mar 16 03:34 start_atlas.sh
[2026-03-16 04:41:15] -rw-r--r--. 2 boinc boinc    597533 Mar 16 03:34 input.tar.gz
[2026-03-16 04:41:15] -rw-------. 1 boinc boinc 182943142 Mar 16 04:39 HITS.pool.root.1
[2026-03-16 04:41:15] -rw-------. 1 boinc boinc    849920 Mar 16 04:41 result.tar.gz
04:41:16 (1388193): run_atlas exited; CPU time 15006.055063
04:41:16 (1388193): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN