Stderr output

<core_client_version>8.3.0</core_client_version>
<![CDATA[
<stderr_txt>
00:31:10 (2047978): wrapper (7.7.26015): starting
00:31:10 (2047978): wrapper: running run_atlas (--nthreads 4)
[2026-03-15 00:31:10] Arguments: --nthreads 4
[2026-03-15 00:31:10] Threads: 4
[2026-03-15 00:31:10] Checking for CVMFS
[2026-03-15 00:31:10] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-15 00:31:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-15 00:31:10] Running cvmfs_config stat atlas.cern.ch
[2026-03-15 00:31:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-15 00:31:10] 2.13.3.0 2016825 7 45484 157302 0 188 3033897 4096000 1538 130560 0 79794 99.982 1445 1210 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 0
[2026-03-15 00:31:10] CVMFS is ok
[2026-03-15 00:31:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-15 00:31:10] Small home clusters do not require a local http proxy but it is suggested if
[2026-03-15 00:31:10] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-03-15 00:31:10] Further information can be found at the LHC@home message board.
[2026-03-15 00:31:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-15 00:31:10] Checking for apptainer binary...
[2026-03-15 00:31:10] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-15 00:31:10] Running /usr/bin/apptainer --version
[2026-03-15 00:31:10] apptainer version 1.4.5
[2026-03-15 00:31:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-15 00:31:10] Taichi-Ubuntu
[2026-03-15 00:31:10] apptainer works
[2026-03-15 00:31:10] Set ATHENA_PROC_NUMBER=4
[2026-03-15 00:31:10] Set ATHENA_CORE_NUMBER=4
[2026-03-15 00:31:10] Starting ATLAS job with PandaID=7045263937
[2026-03-15 00:31:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/whitlerd/Desktop/BOINC/slots/13 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-15 02:11:51]  *** The last 200 lines of the pilot log: ***
[2026-03-15 02:11:51]  lfn=log.48955010._034855.job.log.tgz.1
[2026-03-15 02:11:51]  mtime=0
[2026-03-15 02:11:51]  protocol_id=None
[2026-03-15 02:11:51]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-15 02:11:51]  replicas=None
[2026-03-15 02:11:51]  scope=mc23_13p6TeV
[2026-03-15 02:11:51]  status=None
[2026-03-15 02:11:51]  status_code=0
[2026-03-15 02:11:51]  storage_token=
[2026-03-15 02:11:51]  surl=/home/whitlerd/Desktop/BOINC/slots/13/PanDA_Pilot-7045263937/log.48955010._034855.job.log.tgz.1
[2026-03-15 02:11:51]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/89/04/log.48955010._034855.job.log.tgz.1
[2026-03-15 02:11:51]  workdir=None
[2026-03-15 02:11:51] ]
[2026-03-15 02:11:51] 2026-03-15 06:11:12,422 | INFO     | transferring file log.48955010._034855.job.log.tgz.1 from /home/whitlerd/Desktop/BOINC/slots/13/PanDA_Pilot-7045263937/log.48955010._034855.job.log.tgz.1 to /home/
[2026-03-15 02:11:51] 2026-03-15 06:11:12,422 | INFO     | executing command: /usr/bin/env mv /home/whitlerd/Desktop/BOINC/slots/13/PanDA_Pilot-7045263937/log.48955010._034855.job.log.tgz.1 /home/whitlerd/Desktop/BOINC/slo
[2026-03-15 02:11:51] 2026-03-15 06:11:12,443 | INFO     | adding to output.list: log.48955010._034855.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/89/04/log.48955010._034855.job.log.tg
[2026-03-15 02:11:51] 2026-03-15 06:11:12,444 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-15 02:11:51] 2026-03-15 06:11:12,444 | INFO     | summary of transferred files:
[2026-03-15 02:11:51] 2026-03-15 06:11:12,444 | INFO     |  -- lfn=log.48955010._034855.job.log.tgz.1, status_code=0, status=transferred
[2026-03-15 02:11:51] 2026-03-15 06:11:12,444 | INFO     | stage-out finished correctly
[2026-03-15 02:11:51] 2026-03-15 06:11:13,636 | WARNING  | process 2065719 can no longer be monitored (due to stat problems) - aborting
[2026-03-15 02:11:51] 2026-03-15 06:11:13,636 | INFO     | using path: /home/whitlerd/Desktop/BOINC/slots/13/PanDA_Pilot-7045263937/memory_monitor_summary.json (trf name=prmon)
[2026-03-15 02:11:51] 2026-03-15 06:11:13,741 | INFO     | time since job start (5989s) is within the limit (345600.0s)
[2026-03-15 02:11:51] 2026-03-15 06:11:13,808 | INFO     | number of running child processes to parent process 2065719: 1
[2026-03-15 02:11:51] 2026-03-15 06:11:13,808 | INFO     | maximum number of monitored processes: 6
[2026-03-15 02:11:51] 2026-03-15 06:11:15,733 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-15 02:11:51] 2026-03-15 06:11:15,756 | INFO     | time since job start (5991s) is within the limit (345600.0s)
[2026-03-15 02:11:51] 2026-03-15 06:11:16,311 | INFO     | monitor loop #448: job 0:7045263937 is in state 'finished'
[2026-03-15 02:11:51] 2026-03-15 06:11:16,312 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-15 02:11:51] 2026-03-15 06:11:17,778 | INFO     | time since job start (5993s) is within the limit (345600.0s)
[2026-03-15 02:11:51] 2026-03-15 06:11:18,647 | INFO     | job 7045263937 has state=finished
[2026-03-15 02:11:51] 2026-03-15 06:11:18,647 | INFO     | preparing for final server update for job 7045263937 in state='finished'
[2026-03-15 02:11:51] 2026-03-15 06:11:18,648 | INFO     | reading metadata from: /home/whitlerd/Desktop/BOINC/slots/13/PanDA_Pilot-7045263937/jobReport.json
[2026-03-15 02:11:51] 2026-03-15 06:11:18,650 | INFO     | added worker_node to metadata from /home/whitlerd/Desktop/BOINC/slots/13/workernode_map.json
[2026-03-15 02:11:51] 2026-03-15 06:11:18,650 | INFO     | this job has now completed (state=finished)
[2026-03-15 02:11:51] 2026-03-15 06:11:18,650 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-15 02:11:51] 2026-03-15 06:11:18,650 | INFO     | log transfer has been attempted: DONE
[2026-03-15 02:11:51] 2026-03-15 06:11:18,650 | INFO     | job 7045263937 has finished - writing final server update
[2026-03-15 02:11:51] 2026-03-15 06:11:18,650 | INFO     | total number of processed events: 400 (read)
[2026-03-15 02:11:51] 2026-03-15 06:11:18,657 | INFO     | using path: /home/whitlerd/Desktop/BOINC/slots/13/PanDA_Pilot-7045263937/memory_monitor_summary.json (trf name=prmon)
[2026-03-15 02:11:51] 2026-03-15 06:11:18,658 | INFO     | extracted standard info from prmon json
[2026-03-15 02:11:51] 2026-03-15 06:11:18,658 | INFO     | extracted standard memory fields from prmon json
[2026-03-15 02:11:51] 2026-03-15 06:11:18,658 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-15 02:11:51] 2026-03-15 06:11:18,659 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-15 02:11:51] 2026-03-15 06:11:18,659 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-15 02:11:51] 2026-03-15 06:11:18,660 | INFO     | fitting pss+swap vs Time
[2026-03-15 02:11:51] 2026-03-15 06:11:18,661 | INFO     | sum of square deviations: 233641590.0
[2026-03-15 02:11:51] 2026-03-15 06:11:18,661 | INFO     | sum of deviations: -4917048227.999999
[2026-03-15 02:11:51] 2026-03-15 06:11:18,661 | INFO     | mean x: 1773552155.0
[2026-03-15 02:11:51] 2026-03-15 06:11:18,661 | INFO     | mean y: 2358499.054945055
[2026-03-15 02:11:51] 2026-03-15 06:11:18,661 | INFO     | intersect: 37327226391.83179
[2026-03-15 02:11:51] 2026-03-15 06:11:18,661 | INFO     | chi2: 0.011591763641243485
[2026-03-15 02:11:51] 2026-03-15 06:11:18,661 | INFO     | current memory leak: -21.05 B/s (using 91 data points, chi2=0.01)
[2026-03-15 02:11:51] 2026-03-15 06:11:18,662 | INFO     | could have reported an average CPU frequency of 3301 MHz (7 samples)
[2026-03-15 02:11:51] 2026-03-15 06:11:18,662 | INFO     | ..............................
[2026-03-15 02:11:51] 2026-03-15 06:11:18,662 | INFO     | . Timing measurements:
[2026-03-15 02:11:51] 2026-03-15 06:11:18,662 | INFO     | . get job = 0 s
[2026-03-15 02:11:51] 2026-03-15 06:11:18,662 | INFO     | . initial setup = 6 s
[2026-03-15 02:11:51] 2026-03-15 06:11:18,662 | INFO     | . payload setup = 5 s
[2026-03-15 02:11:51] 2026-03-15 06:11:18,662 | INFO     | . stage-in = 0 s
[2026-03-15 02:11:51] 2026-03-15 06:11:18,662 | INFO     | . payload execution = 5966 s
[2026-03-15 02:11:51] 2026-03-15 06:11:18,662 | INFO     | . stage-out = 0 s
[2026-03-15 02:11:51] 2026-03-15 06:11:18,662 | INFO     | . log creation = 0 s
[2026-03-15 02:11:51] 2026-03-15 06:11:18,662 | INFO     | ..............................
[2026-03-15 02:11:51] 2026-03-15 06:11:18,721 | INFO     | 
[2026-03-15 02:11:51] 2026-03-15 06:11:18,721 | INFO     | job summary report
[2026-03-15 02:11:51] 2026-03-15 06:11:18,721 | INFO     | --------------------------------------------------
[2026-03-15 02:11:51] 2026-03-15 06:11:18,721 | INFO     | PanDA job id: 7045263937
[2026-03-15 02:11:51] 2026-03-15 06:11:18,721 | INFO     | task id: 48955010
[2026-03-15 02:11:51] 2026-03-15 06:11:18,721 | INFO     | errors: (none)
[2026-03-15 02:11:51] 2026-03-15 06:11:18,722 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-15 02:11:51] 2026-03-15 06:11:18,722 | INFO     | pilot state: finished 
[2026-03-15 02:11:51] 2026-03-15 06:11:18,722 | INFO     | transexitcode: 0
[2026-03-15 02:11:51] 2026-03-15 06:11:18,722 | INFO     | exeerrorcode: 0
[2026-03-15 02:11:51] 2026-03-15 06:11:18,722 | INFO     | exeerrordiag: 
[2026-03-15 02:11:51] 2026-03-15 06:11:18,722 | INFO     | exitcode: 0
[2026-03-15 02:11:51] 2026-03-15 06:11:18,722 | INFO     | exitmsg: OK
[2026-03-15 02:11:51] 2026-03-15 06:11:18,722 | INFO     | cpuconsumptiontime: 23149 s
[2026-03-15 02:11:51] 2026-03-15 06:11:18,722 | INFO     | nevents: 400
[2026-03-15 02:11:51] 2026-03-15 06:11:18,722 | INFO     | neventsw: 0
[2026-03-15 02:11:51] 2026-03-15 06:11:18,722 | INFO     | pid: 2065719
[2026-03-15 02:11:51] 2026-03-15 06:11:18,722 | INFO     | pgrp: 2065719
[2026-03-15 02:11:51] 2026-03-15 06:11:18,722 | INFO     | corecount: 4
[2026-03-15 02:11:51] 2026-03-15 06:11:18,722 | INFO     | event service: False
[2026-03-15 02:11:51] 2026-03-15 06:11:18,723 | INFO     | sizes: {0: 2279705, 1: 2280222, 11: 2280222, 5976: 2307054, 5977: 2316082, 5981: 2316138, 5983: 2316460}
[2026-03-15 02:11:51] 2026-03-15 06:11:18,723 | INFO     | --------------------------------------------------
[2026-03-15 02:11:51] 2026-03-15 06:11:18,723 | INFO     | 
[2026-03-15 02:11:51] 2026-03-15 06:11:18,723 | INFO     | executing command: ls -lF /home/whitlerd/Desktop/BOINC/slots/13
[2026-03-15 02:11:51] 2026-03-15 06:11:18,745 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-15 02:11:51] 2026-03-15 06:11:18,746 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-15 02:11:51] 2026-03-15 06:11:18,746 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-15 02:11:51] 2026-03-15 06:11:18,746 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-15 02:11:51] 2026-03-15 06:11:18,746 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-15 02:11:51] 2026-03-15 06:11:18,746 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-15 02:11:51] 2026-03-15 06:11:18,746 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-15 02:11:51] 2026-03-15 06:11:18,746 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-15 02:11:51] 2026-03-15 06:11:18,746 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-15 02:11:51] 2026-03-15 06:11:18,746 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-15 02:11:51] 2026-03-15 06:11:18,746 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-15 02:11:51] 2026-03-15 06:11:18,746 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-15 02:11:51] 2026-03-15 06:11:18,746 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-15 02:11:51] 2026-03-15 06:11:18,746 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-15 02:11:51] 2026-03-15 06:11:18,746 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-15 02:11:51] 2026-03-15 06:11:18,747 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-15 02:11:51] 2026-03-15 06:11:18,747 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-15 02:11:51] 2026-03-15 06:11:18,747 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-15 02:11:51] 2026-03-15 06:11:18,747 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-15 02:11:51] 2026-03-15 06:11:18,747 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-15 02:11:51] 2026-03-15 06:11:18,747 | INFO     | job 7045263937 has completed (purged errors)
[2026-03-15 02:11:51] 2026-03-15 06:11:18,747 | INFO     | overall cleanup function is called
[2026-03-15 02:11:51] 2026-03-15 06:11:19,755 | INFO     | --- collectZombieJob: --- 10, [2065719]
[2026-03-15 02:11:51] 2026-03-15 06:11:19,755 | INFO     | zombie collector waiting for pid 2065719
[2026-03-15 02:11:51] 2026-03-15 06:11:19,755 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-15 02:11:51] 2026-03-15 06:11:19,755 | INFO     | collected zombie processes
[2026-03-15 02:11:51] 2026-03-15 06:11:19,755 | INFO     | will attempt to kill all subprocesses of pid=2065719
[2026-03-15 02:11:51] 2026-03-15 06:11:19,915 | INFO     | process IDs to be killed: [2065719] (in reverse order)
[2026-03-15 02:11:51] 2026-03-15 06:11:19,975 | WARNING  | found no corresponding commands to process id(s)
[2026-03-15 02:11:51] 2026-03-15 06:11:19,975 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-15 02:11:51] 2026-03-15 06:11:19,980 | INFO     | did not find any defunct processes belonging to 2065719
[2026-03-15 02:11:51] 2026-03-15 06:11:19,983 | INFO     | did not find any defunct processes belonging to 2065719
[2026-03-15 02:11:51] 2026-03-15 06:11:19,984 | INFO     | ready for new job
[2026-03-15 02:11:51] 2026-03-15 06:11:19,984 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-15 02:11:51] 2026-03-15 06:11:19,985 | INFO     | **************************************
[2026-03-15 02:11:51] 2026-03-15 06:11:19,985 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-15 02:11:51] 2026-03-15 06:11:19,985 | INFO     | **************************************
[2026-03-15 02:11:51] 2026-03-15 06:11:19,985 | INFO     | 
[2026-03-15 02:11:51] 2026-03-15 06:11:19,987 | INFO     | architecture information:
[2026-03-15 02:11:51] 2026-03-15 06:11:19,987 | INFO     | executing command: cat /etc/os-release
[2026-03-15 02:11:51] 2026-03-15 06:11:20,001 | INFO     | cat /etc/os-release:
[2026-03-15 02:11:51] NAME="CentOS Linux"
[2026-03-15 02:11:51] VERSION="7 (Core)"
[2026-03-15 02:11:51] ID="centos"
[2026-03-15 02:11:51] ID_LIKE="rhel fedora"
[2026-03-15 02:11:51] VERSION_ID="7"
[2026-03-15 02:11:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-15 02:11:51] ANSI_COLOR="0;31"
[2026-03-15 02:11:51] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-15 02:11:51] HOME_URL="https://www.centos.org/"
[2026-03-15 02:11:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-15 02:11:51] 
[2026-03-15 02:11:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-15 02:11:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-15 02:11:51] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-15 02:11:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-15 02:11:51] 
[2026-03-15 02:11:51] 2026-03-15 06:11:20,002 | INFO     | **************************************
[2026-03-15 02:11:51] 2026-03-15 06:11:20,505 | INFO     | executing command: df -mP /home/whitlerd/Desktop/BOINC/slots/13
[2026-03-15 02:11:51] 2026-03-15 06:11:20,522 | INFO     | sufficient remaining disk space (392529182720 B)
[2026-03-15 02:11:51] 2026-03-15 06:11:20,522 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-15 02:11:51] 2026-03-15 06:11:20,523 | INFO     | current server update state: UPDATING_FINAL
[2026-03-15 02:11:51] 2026-03-15 06:11:20,523 | INFO     | update_server=False
[2026-03-15 02:11:51] 2026-03-15 06:11:20,523 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-15 02:11:51] 2026-03-15 06:11:20,523 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-15 02:11:51] 2026-03-15 06:11:20,523 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-15 02:11:51] 2026-03-15 06:11:20,524 | INFO     | aborting loop
[2026-03-15 02:11:51] 2026-03-15 06:11:20,524 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-15 02:11:51] 2026-03-15 06:11:21,375 | INFO     | all job control threads have been joined
[2026-03-15 02:11:51] 2026-03-15 06:11:21,514 | INFO     | all data control threads have been joined
[2026-03-15 02:11:51] 2026-03-15 06:11:21,528 | INFO     | [job] retrieve thread has finished
[2026-03-15 02:11:51] 2026-03-15 06:11:21,529 | INFO     | [job] job monitor thread has finished
[2026-03-15 02:11:51] 2026-03-15 06:11:21,530 | INFO     | [job] queue monitor thread has finished
[2026-03-15 02:11:51] 2026-03-15 06:11:21,569 | INFO     | all payload control threads have been joined
[2026-03-15 02:11:51] 2026-03-15 06:11:21,581 | INFO     | [payload] validate_post thread has finished
[2026-03-15 02:11:51] 2026-03-15 06:11:21,797 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-15 02:11:51] 2026-03-15 06:11:22,117 | INFO     | [payload] failed_post thread has finished
[2026-03-15 02:11:51] 2026-03-15 06:11:22,380 | INFO     | [job] control thread has finished
[2026-03-15 02:11:51] 2026-03-15 06:11:22,427 | INFO     | [payload] execute_payloads thread has finished
[2026-03-15 02:11:51] 2026-03-15 06:11:22,508 | INFO     | [job] create_data_payload thread has finished
[2026-03-15 02:11:51] 2026-03-15 06:11:22,510 | INFO     | [job] validate thread has finished
[2026-03-15 02:11:51] 2026-03-15 06:11:22,520 | INFO     | [data] control thread has finished
[2026-03-15 02:11:51] 2026-03-15 06:11:22,528 | INFO     | [data] copytool_out thread has finished
[2026-03-15 02:11:51] 2026-03-15 06:11:22,574 | INFO     | [payload] control thread has finished
[2026-03-15 02:11:51] 2026-03-15 06:11:22,609 | INFO     | [payload] validate_pre thread has finished
[2026-03-15 02:11:51] 2026-03-15 06:11:22,671 | INFO     | [data] copytool_in thread has finished
[2026-03-15 02:11:51] 2026-03-15 06:11:25,803 | INFO     | [data] queue_monitor thread has finished
[2026-03-15 02:11:51] 2026-03-15 06:11:31,231 | INFO     | job.realtimelogging is not enabled
[2026-03-15 02:11:51] 2026-03-15 06:11:32,236 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-15 02:11:51] 2026-03-15 06:11:32,736 | INFO     | [monitor] cgroup control has ended
[2026-03-15 02:11:51] 2026-03-15 06:11:33,611 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 130461788022592)>', '<ExcThread(monitor, started 130461300942592)>']
[2026-03-15 02:11:51] 2026-03-15 06:11:38,636 | INFO     | all workflow threads have been joined
[2026-03-15 02:11:51] 2026-03-15 06:11:38,637 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-15 02:11:51] 2026-03-15 06:11:38,637 | INFO     | traces error code: 0
[2026-03-15 02:11:51] 2026-03-15 06:11:38,637 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-15 02:11:51] 2026-03-15 06:11:51,043 | INFO     | PID=2054038 has CPU usage=4.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-15 02:11:51] 2026-03-15 06:11:51,043 | INFO     | .. there are 2 such processes running
[2026-03-15 02:11:51] 2026-03-15 06:11:51,044 | INFO     | found 0 job(s) in 20 queues
[2026-03-15 02:11:51] 2026-03-15 06:11:51,044 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-15 02:11:51] 2026-03-15 06:11:51,044 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-15 02:11:51] 2026-03-15 06:11:51,044 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-15 02:11:51] 2026-03-15 06:11:51,044 | INFO     | [monitor] control thread has ended
[2026-03-15 02:11:51] 2026-03-15 06:11:51,155 [wrapper] ==== pilot stdout END ====
[2026-03-15 02:11:51] 2026-03-15 06:11:51,159 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-15 02:11:51] 2026-03-15 06:11:51,161 [wrapper] pilotpid: 2054038
[2026-03-15 02:11:51] 2026-03-15 06:11:51,163 [wrapper] Pilot exit status: 0
[2026-03-15 02:11:51] 2026-03-15 06:11:51,172 [wrapper] pandaids: 7045263937
[2026-03-15 02:11:51] 2026-03-15 06:11:51,214 [wrapper] cleanup supervisor_pilot 2074251 2054039
[2026-03-15 02:11:51] 2026-03-15 06:11:51,218 [wrapper] Test setup, not cleaning
[2026-03-15 02:11:51] 2026-03-15 06:11:51,221 [wrapper] apfmon messages muted
[2026-03-15 02:11:51] 2026-03-15 06:11:51,223 [wrapper] ==== wrapper stdout END ====
[2026-03-15 02:11:51] 2026-03-15 06:11:51,225 [wrapper] ==== wrapper stderr END ====
[2026-03-15 02:11:51]  *** Error codes and diagnostics ***
[2026-03-15 02:11:51]     "exeErrorCode": 0,
[2026-03-15 02:11:51]     "exeErrorDiag": "",
[2026-03-15 02:11:51]     "pilotErrorCode": 0,
[2026-03-15 02:11:51]     "pilotErrorDiag": "",
[2026-03-15 02:11:51]  *** Listing of results directory ***
[2026-03-15 02:11:51] total 619192
[2026-03-15 02:11:51] -rw-r--r-- 1 whitlerd whitlerd    585013 Mar 13 19:38 pilot3.tar.gz
[2026-03-15 02:11:51] -rwx------ 1 whitlerd whitlerd     36322 Mar 13 19:41 runpilot2-wrapper.sh
[2026-03-15 02:11:51] -rw-r--r-- 1 whitlerd whitlerd      5111 Mar 13 19:44 queuedata.json
[2026-03-15 02:11:51] -rw-rw-r-- 1 whitlerd whitlerd       100 Mar 15 00:31 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-15 02:11:51] -rwxr-xr-x 1 whitlerd whitlerd      7986 Mar 15 00:31 run_atlas
[2026-03-15 02:11:51] -rw-rw-r-- 1 whitlerd whitlerd       105 Mar 15 00:31 job.xml
[2026-03-15 02:11:51] -rw-r--r-- 2 whitlerd whitlerd 442807567 Mar 15 00:31 EVNT.46701403._001692.pool.root.1
[2026-03-15 02:11:51] -rw-r--r-- 2 whitlerd whitlerd     15845 Mar 15 00:31 start_atlas.sh
[2026-03-15 02:11:51] drwxrwx--x 2 whitlerd whitlerd      4096 Mar 15 00:31 shared
[2026-03-15 02:11:51] -rw-r--r-- 2 whitlerd whitlerd    597528 Mar 15 00:31 input.tar.gz
[2026-03-15 02:11:51] -rw-rw-r-- 1 whitlerd whitlerd      9344 Mar 15 00:31 init_data.xml
[2026-03-15 02:11:51] -rw-rw-r-- 1 whitlerd whitlerd         0 Mar 15 00:31 boinc_setup_complete
[2026-03-15 02:11:51] -rw-rw-r-- 1 whitlerd whitlerd         0 Mar 15 00:31 boinc_lockfile
[2026-03-15 02:11:51] -rw-rw-r-- 1 whitlerd whitlerd      2563 Mar 15 00:31 pandaJob.out
[2026-03-15 02:11:51] -rw------- 1 whitlerd whitlerd   1006481 Mar 15 00:31 agis_schedconf.cvmfs.json
[2026-03-15 02:11:51] -rw------- 1 whitlerd whitlerd   1511579 Mar 15 00:31 agis_ddmendpoints.agis.ALL.json
[2026-03-15 02:11:51] -rw------- 1 whitlerd whitlerd       438 Mar 15 00:31 workernode_map.json
[2026-03-15 02:11:51] drwx------ 5 whitlerd whitlerd      4096 Mar 15 00:31 pilot3
[2026-03-15 02:11:51] -rw-rw-r-- 1 whitlerd whitlerd       530 Mar 15 02:10 boinc_task_state.xml
[2026-03-15 02:11:51] -rw------- 1 whitlerd whitlerd 184943234 Mar 15 02:10 HITS.48955010._034855.pool.root.1
[2026-03-15 02:11:51] -rw------- 1 whitlerd whitlerd      1029 Mar 15 02:11 memory_monitor_summary.json
[2026-03-15 02:11:51] -rw------- 1 whitlerd whitlerd    295480 Mar 15 02:11 log.48955010._034855.job.log.tgz.1
[2026-03-15 02:11:51] -rw------- 1 whitlerd whitlerd      6346 Mar 15 02:11 heartbeat.json
[2026-03-15 02:11:51] -rw-rw-r-- 1 whitlerd whitlerd      8192 Mar 15 02:11 boinc_mmap_file
[2026-03-15 02:11:51] -rw-rw-r-- 1 whitlerd whitlerd        27 Mar 15 02:11 wrapper_checkpoint.txt
[2026-03-15 02:11:51] -rw------- 1 whitlerd whitlerd       822 Mar 15 02:11 pilotlog.txt
[2026-03-15 02:11:51] -rw------- 1 whitlerd whitlerd        95 Mar 15 02:11 pilot_heartbeat.json
[2026-03-15 02:11:51] -rw------- 1 whitlerd whitlerd    882304 Mar 15 02:11 log.48955010._034855.job.log.1
[2026-03-15 02:11:51] -rw------- 1 whitlerd whitlerd       357 Mar 15 02:11 output.list
[2026-03-15 02:11:51] -rw-rw-r-- 1 whitlerd whitlerd       620 Mar 15 02:11 runtime_log
[2026-03-15 02:11:51] -rw------- 1 whitlerd whitlerd   1198080 Mar 15 02:11 result.tar.gz
[2026-03-15 02:11:51] -rw-rw-r-- 1 whitlerd whitlerd      9040 Mar 15 02:11 runtime_log.err
[2026-03-15 02:11:51] -rw------- 1 whitlerd whitlerd       648 Mar 15 02:11 ixjLDmCJRL9n9Rq4apOajLDm4fhM0noT9bVooX4SDmOcoLDmZfmLnn.diag
[2026-03-15 02:11:51] -rw-rw-r-- 1 whitlerd whitlerd     21832 Mar 15 02:11 stderr.txt
[2026-03-15 02:11:51] HITS file was successfully produced:
[2026-03-15 02:11:51] -rw------- 1 whitlerd whitlerd 184943234 Mar 15 02:10 shared/HITS.pool.root.1
[2026-03-15 02:11:51]  *** Contents of shared directory: ***
[2026-03-15 02:11:51] total 614824
[2026-03-15 02:11:51] -rw-r--r-- 2 whitlerd whitlerd 442807567 Mar 15 00:31 ATLAS.root_0
[2026-03-15 02:11:51] -rw-r--r-- 2 whitlerd whitlerd     15845 Mar 15 00:31 start_atlas.sh
[2026-03-15 02:11:51] -rw-r--r-- 2 whitlerd whitlerd    597528 Mar 15 00:31 input.tar.gz
[2026-03-15 02:11:51] -rw------- 1 whitlerd whitlerd 184943234 Mar 15 02:10 HITS.pool.root.1
[2026-03-15 02:11:51] -rw------- 1 whitlerd whitlerd   1198080 Mar 15 02:11 result.tar.gz
02:11:52 (2047978): run_atlas exited; CPU time 23243.137348
02:11:52 (2047978): called boinc_finish(0)

</stderr_txt>
]]>

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