Stderr output

<core_client_version>8.3.0</core_client_version>
<![CDATA[
<stderr_txt>
22:38:02 (1984224): wrapper (7.7.26015): starting
22:38:02 (1984224): wrapper: running run_atlas (--nthreads 4)
[2026-03-14 22:38:02] Arguments: --nthreads 4
[2026-03-14 22:38:02] Threads: 4
[2026-03-14 22:38:02] Checking for CVMFS
[2026-03-14 22:38:02] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-14 22:38:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-14 22:38:02] Running cvmfs_config stat atlas.cern.ch
[2026-03-14 22:38:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-14 22:38:03] 2.13.3.0 196114 12515 51740 157298 0 188 3014687 4096001 2712 130560 0 16066095 99.994 446866 911 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 0
[2026-03-14 22:38:03] CVMFS is ok
[2026-03-14 22:38:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-14 22:38:03] Small home clusters do not require a local http proxy but it is suggested if
[2026-03-14 22:38:03] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-03-14 22:38:03] Further information can be found at the LHC@home message board.
[2026-03-14 22:38:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-14 22:38:03] Checking for apptainer binary...
[2026-03-14 22:38:03] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-14 22:38:03] Running /usr/bin/apptainer --version
[2026-03-14 22:38:03] apptainer version 1.4.5
[2026-03-14 22:38:03] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-14 22:38:03] Taichi-Ubuntu
[2026-03-14 22:38:03] apptainer works
[2026-03-14 22:38:03] Set ATHENA_PROC_NUMBER=4
[2026-03-14 22:38:03] Set ATHENA_CORE_NUMBER=4
[2026-03-14 22:38:03] Starting ATLAS job with PandaID=7055274492
[2026-03-14 22:38:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/whitlerd/Desktop/BOINC/slots/13 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-15 00:13:31]  *** The last 200 lines of the pilot log: ***
[2026-03-15 00:13:31]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-15 00:13:31]  is_altstaged=None
[2026-03-15 00:13:31]  is_tar=False
[2026-03-15 00:13:31]  lfn=log.48955010._052034.job.log.tgz.1
[2026-03-15 00:13:31]  mtime=0
[2026-03-15 00:13:31]  protocol_id=None
[2026-03-15 00:13:31]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-15 00:13:31]  replicas=None
[2026-03-15 00:13:31]  scope=mc23_13p6TeV
[2026-03-15 00:13:31]  status=None
[2026-03-15 00:13:31]  status_code=0
[2026-03-15 00:13:31]  storage_token=
[2026-03-15 00:13:31]  surl=/home/whitlerd/Desktop/BOINC/slots/13/PanDA_Pilot-7055274492/log.48955010._052034.job.log.tgz.1
[2026-03-15 00:13:31]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f2/7a/log.48955010._052034.job.log.tgz.1
[2026-03-15 00:13:31]  workdir=None
[2026-03-15 00:13:31] ]
[2026-03-15 00:13:31] 2026-03-15 04:12:36,599 | INFO     | transferring file log.48955010._052034.job.log.tgz.1 from /home/whitlerd/Desktop/BOINC/slots/13/PanDA_Pilot-7055274492/log.48955010._052034.job.log.tgz.1 to /home/
[2026-03-15 00:13:31] 2026-03-15 04:12:36,600 | INFO     | executing command: /usr/bin/env mv /home/whitlerd/Desktop/BOINC/slots/13/PanDA_Pilot-7055274492/log.48955010._052034.job.log.tgz.1 /home/whitlerd/Desktop/BOINC/slo
[2026-03-15 00:13:31] 2026-03-15 04:12:36,617 | INFO     | time since job start (5658s) is within the limit (345600.0s)
[2026-03-15 00:13:31] 2026-03-15 04:12:36,618 | INFO     | adding to output.list: log.48955010._052034.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f2/7a/log.48955010._052034.job.log.tg
[2026-03-15 00:13:31] 2026-03-15 04:12:36,618 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-15 00:13:31] 2026-03-15 04:12:36,618 | INFO     | summary of transferred files:
[2026-03-15 00:13:31] 2026-03-15 04:12:36,618 | INFO     |  -- lfn=log.48955010._052034.job.log.tgz.1, status_code=0, status=transferred
[2026-03-15 00:13:31] 2026-03-15 04:12:36,618 | INFO     | stage-out finished correctly
[2026-03-15 00:13:31] 2026-03-15 04:12:36,675 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-15 00:13:31] 2026-03-15 04:12:36,736 | INFO     | job 7055274492 has state=finished
[2026-03-15 00:13:31] 2026-03-15 04:12:36,736 | INFO     | preparing for final server update for job 7055274492 in state='finished'
[2026-03-15 00:13:31] 2026-03-15 04:12:36,736 | INFO     | reading metadata from: /home/whitlerd/Desktop/BOINC/slots/13/PanDA_Pilot-7055274492/jobReport.json
[2026-03-15 00:13:31] 2026-03-15 04:12:36,738 | INFO     | added worker_node to metadata from /home/whitlerd/Desktop/BOINC/slots/13/workernode_map.json
[2026-03-15 00:13:31] 2026-03-15 04:12:36,739 | INFO     | this job has now completed (state=finished)
[2026-03-15 00:13:31] 2026-03-15 04:12:36,739 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-15 00:13:31] 2026-03-15 04:12:36,739 | INFO     | log transfer has been attempted: DONE
[2026-03-15 00:13:31] 2026-03-15 04:12:36,739 | INFO     | job 7055274492 has finished - writing final server update
[2026-03-15 00:13:31] 2026-03-15 04:12:36,739 | INFO     | total number of processed events: 400 (read)
[2026-03-15 00:13:31] 2026-03-15 04:12:36,746 | INFO     | using path: /home/whitlerd/Desktop/BOINC/slots/13/PanDA_Pilot-7055274492/memory_monitor_summary.json (trf name=prmon)
[2026-03-15 00:13:31] 2026-03-15 04:12:36,746 | INFO     | extracted standard info from prmon json
[2026-03-15 00:13:31] 2026-03-15 04:12:36,746 | INFO     | extracted standard memory fields from prmon json
[2026-03-15 00:13:31] 2026-03-15 04:12:36,746 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-15 00:13:31] 2026-03-15 04:12:36,746 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-15 00:13:31] 2026-03-15 04:12:36,746 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-15 00:13:31] 2026-03-15 04:12:36,748 | INFO     | fitting pss+swap vs Time
[2026-03-15 00:13:31] 2026-03-15 04:12:36,748 | INFO     | sum of square deviations: 197203697.5
[2026-03-15 00:13:31] 2026-03-15 04:12:36,748 | INFO     | sum of deviations: -6243568197.0
[2026-03-15 00:13:31] 2026-03-15 04:12:36,749 | INFO     | mean x: 1773545217.5
[2026-03-15 00:13:31] 2026-03-15 04:12:36,749 | INFO     | mean y: 2383478.511627907
[2026-03-15 00:13:31] 2026-03-15 04:12:36,749 | INFO     | intersect: 56153716624.40484
[2026-03-15 00:13:31] 2026-03-15 04:12:36,749 | INFO     | chi2: 0.03279908267520992
[2026-03-15 00:13:31] 2026-03-15 04:12:36,749 | INFO     | current memory leak: -31.66 B/s (using 86 data points, chi2=0.03)
[2026-03-15 00:13:31] 2026-03-15 04:12:36,749 | INFO     | could have reported an average CPU frequency of 3358 MHz (7 samples)
[2026-03-15 00:13:31] 2026-03-15 04:12:36,749 | INFO     | ..............................
[2026-03-15 00:13:31] 2026-03-15 04:12:36,749 | INFO     | . Timing measurements:
[2026-03-15 00:13:31] 2026-03-15 04:12:36,749 | INFO     | . get job = 0 s
[2026-03-15 00:13:31] 2026-03-15 04:12:36,749 | INFO     | . initial setup = 6 s
[2026-03-15 00:13:31] 2026-03-15 04:12:36,749 | INFO     | . payload setup = 6 s
[2026-03-15 00:13:31] 2026-03-15 04:12:36,749 | INFO     | . stage-in = 0 s
[2026-03-15 00:13:31] 2026-03-15 04:12:36,750 | INFO     | . payload execution = 5636 s
[2026-03-15 00:13:31] 2026-03-15 04:12:36,750 | INFO     | . stage-out = 0 s
[2026-03-15 00:13:31] 2026-03-15 04:12:36,750 | INFO     | . log creation = 0 s
[2026-03-15 00:13:31] 2026-03-15 04:12:36,750 | INFO     | ..............................
[2026-03-15 00:13:31] 2026-03-15 04:12:36,808 | INFO     | 
[2026-03-15 00:13:31] 2026-03-15 04:12:36,808 | INFO     | job summary report
[2026-03-15 00:13:31] 2026-03-15 04:12:36,808 | INFO     | --------------------------------------------------
[2026-03-15 00:13:31] 2026-03-15 04:12:36,809 | INFO     | PanDA job id: 7055274492
[2026-03-15 00:13:31] 2026-03-15 04:12:36,809 | INFO     | task id: 48955010
[2026-03-15 00:13:31] 2026-03-15 04:12:36,809 | INFO     | errors: (none)
[2026-03-15 00:13:31] 2026-03-15 04:12:36,809 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-15 00:13:31] 2026-03-15 04:12:36,809 | INFO     | pilot state: finished 
[2026-03-15 00:13:31] 2026-03-15 04:12:36,809 | INFO     | transexitcode: 0
[2026-03-15 00:13:31] 2026-03-15 04:12:36,809 | INFO     | exeerrorcode: 0
[2026-03-15 00:13:31] 2026-03-15 04:12:36,809 | INFO     | exeerrordiag: 
[2026-03-15 00:13:31] 2026-03-15 04:12:36,809 | INFO     | exitcode: 0
[2026-03-15 00:13:31] 2026-03-15 04:12:36,809 | INFO     | exitmsg: OK
[2026-03-15 00:13:31] 2026-03-15 04:12:36,809 | INFO     | cpuconsumptiontime: 21751 s
[2026-03-15 00:13:31] 2026-03-15 04:12:36,809 | INFO     | nevents: 400
[2026-03-15 00:13:31] 2026-03-15 04:12:36,809 | INFO     | neventsw: 0
[2026-03-15 00:13:31] 2026-03-15 04:12:36,810 | INFO     | pid: 1992773
[2026-03-15 00:13:31] 2026-03-15 04:12:36,810 | INFO     | pgrp: 1992773
[2026-03-15 00:13:31] 2026-03-15 04:12:36,810 | INFO     | corecount: 4
[2026-03-15 00:13:31] 2026-03-15 04:12:36,810 | INFO     | event service: False
[2026-03-15 00:13:31] 2026-03-15 04:12:36,810 | INFO     | sizes: {0: 2279710, 1: 2280171, 11: 2280171, 5646: 2306893, 5647: 2315976, 5648: 2316114}
[2026-03-15 00:13:31] 2026-03-15 04:12:36,810 | INFO     | --------------------------------------------------
[2026-03-15 00:13:31] 2026-03-15 04:12:36,810 | INFO     | 
[2026-03-15 00:13:31] 2026-03-15 04:12:36,810 | INFO     | executing command: ls -lF /home/whitlerd/Desktop/BOINC/slots/13
[2026-03-15 00:13:31] 2026-03-15 04:12:36,829 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-15 00:13:31] 2026-03-15 04:12:36,829 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-15 00:13:31] 2026-03-15 04:12:36,829 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-15 00:13:31] 2026-03-15 04:12:36,829 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-15 00:13:31] 2026-03-15 04:12:36,829 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-15 00:13:31] 2026-03-15 04:12:36,829 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-15 00:13:31] 2026-03-15 04:12:36,829 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-15 00:13:31] 2026-03-15 04:12:36,829 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-15 00:13:31] 2026-03-15 04:12:36,829 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-15 00:13:31] 2026-03-15 04:12:36,829 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-15 00:13:31] 2026-03-15 04:12:36,829 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-15 00:13:31] 2026-03-15 04:12:36,830 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-15 00:13:31] 2026-03-15 04:12:36,830 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-15 00:13:31] 2026-03-15 04:12:36,830 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-15 00:13:31] 2026-03-15 04:12:36,830 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-15 00:13:31] 2026-03-15 04:12:36,830 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-15 00:13:31] 2026-03-15 04:12:36,830 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-15 00:13:31] 2026-03-15 04:12:36,830 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-15 00:13:31] 2026-03-15 04:12:36,830 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-15 00:13:31] 2026-03-15 04:12:36,830 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-15 00:13:31] 2026-03-15 04:12:36,830 | INFO     | job 7055274492 has completed (purged errors)
[2026-03-15 00:13:31] 2026-03-15 04:12:36,830 | INFO     | overall cleanup function is called
[2026-03-15 00:13:31] 2026-03-15 04:12:37,699 | WARNING  | process 1992773 can no longer be monitored (due to stat problems) - aborting
[2026-03-15 00:13:31] 2026-03-15 04:12:37,814 | INFO     | using path: /home/whitlerd/Desktop/BOINC/slots/13/memory_monitor_summary.json (trf name=prmon)
[2026-03-15 00:13:31] 2026-03-15 04:12:37,838 | INFO     | --- collectZombieJob: --- 10, [1992773]
[2026-03-15 00:13:31] 2026-03-15 04:12:37,838 | INFO     | zombie collector waiting for pid 1992773
[2026-03-15 00:13:31] 2026-03-15 04:12:37,838 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-15 00:13:31] 2026-03-15 04:12:37,839 | INFO     | collected zombie processes
[2026-03-15 00:13:31] 2026-03-15 04:12:37,839 | INFO     | will attempt to kill all subprocesses of pid=1992773
[2026-03-15 00:13:31] 2026-03-15 04:12:38,309 | INFO     | number of running child processes to parent process 1992773: 1
[2026-03-15 00:13:31] 2026-03-15 04:12:38,309 | INFO     | maximum number of monitored processes: 6
[2026-03-15 00:13:31] 2026-03-15 04:12:38,309 | INFO     | aborting job monitoring since job object (job id=7055274492) has expired
[2026-03-15 00:13:31] 2026-03-15 04:12:38,319 | INFO     | process IDs to be killed: [1992773] (in reverse order)
[2026-03-15 00:13:31] 2026-03-15 04:12:38,374 | WARNING  | found no corresponding commands to process id(s)
[2026-03-15 00:13:31] 2026-03-15 04:12:38,374 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-15 00:13:31] 2026-03-15 04:12:38,379 | INFO     | did not find any defunct processes belonging to 1992773
[2026-03-15 00:13:31] 2026-03-15 04:12:38,383 | INFO     | did not find any defunct processes belonging to 1992773
[2026-03-15 00:13:31] 2026-03-15 04:12:38,383 | INFO     | ready for new job
[2026-03-15 00:13:31] 2026-03-15 04:12:38,383 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-15 00:13:31] 2026-03-15 04:12:38,384 | INFO     | **************************************
[2026-03-15 00:13:31] 2026-03-15 04:12:38,384 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-15 00:13:31] 2026-03-15 04:12:38,384 | INFO     | **************************************
[2026-03-15 00:13:31] 2026-03-15 04:12:38,384 | INFO     | 
[2026-03-15 00:13:31] 2026-03-15 04:12:38,386 | INFO     | architecture information:
[2026-03-15 00:13:31] 2026-03-15 04:12:38,387 | INFO     | executing command: cat /etc/os-release
[2026-03-15 00:13:31] 2026-03-15 04:12:38,402 | INFO     | cat /etc/os-release:
[2026-03-15 00:13:31] NAME="CentOS Linux"
[2026-03-15 00:13:31] VERSION="7 (Core)"
[2026-03-15 00:13:31] ID="centos"
[2026-03-15 00:13:31] ID_LIKE="rhel fedora"
[2026-03-15 00:13:31] VERSION_ID="7"
[2026-03-15 00:13:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-15 00:13:31] ANSI_COLOR="0;31"
[2026-03-15 00:13:31] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-15 00:13:31] HOME_URL="https://www.centos.org/"
[2026-03-15 00:13:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-15 00:13:31] 
[2026-03-15 00:13:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-15 00:13:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-15 00:13:31] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-15 00:13:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-15 00:13:31] 
[2026-03-15 00:13:31] 2026-03-15 04:12:38,402 | INFO     | **************************************
[2026-03-15 00:13:31] 2026-03-15 04:12:38,905 | INFO     | executing command: df -mP /home/whitlerd/Desktop/BOINC/slots/13
[2026-03-15 00:13:31] 2026-03-15 04:12:38,921 | INFO     | sufficient remaining disk space (392108703744 B)
[2026-03-15 00:13:31] 2026-03-15 04:12:38,922 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-15 00:13:31] 2026-03-15 04:12:38,922 | INFO     | current server update state: UPDATING_FINAL
[2026-03-15 00:13:31] 2026-03-15 04:12:38,922 | INFO     | update_server=False
[2026-03-15 00:13:31] 2026-03-15 04:12:38,922 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-15 00:13:31] 2026-03-15 04:12:38,922 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-15 00:13:31] 2026-03-15 04:12:38,922 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-15 00:13:31] 2026-03-15 04:12:38,923 | INFO     | will abort loop
[2026-03-15 00:13:31] 2026-03-15 04:12:39,656 | INFO     | all payload control threads have been joined
[2026-03-15 00:13:31] 2026-03-15 04:12:39,680 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-15 00:13:31] 2026-03-15 04:12:39,878 | INFO     | all data control threads have been joined
[2026-03-15 00:13:31] 2026-03-15 04:12:39,927 | INFO     | [job] retrieve thread has finished
[2026-03-15 00:13:31] 2026-03-15 04:12:39,928 | INFO     | [job] job monitor thread has finished
[2026-03-15 00:13:31] 2026-03-15 04:12:40,092 | INFO     | [payload] validate_pre thread has finished
[2026-03-15 00:13:31] 2026-03-15 04:12:40,228 | INFO     | [data] copytool_in thread has finished
[2026-03-15 00:13:31] 2026-03-15 04:12:40,263 | INFO     | all job control threads have been joined
[2026-03-15 00:13:31] 2026-03-15 04:12:40,353 | INFO     | [payload] validate_post thread has finished
[2026-03-15 00:13:31] 2026-03-15 04:12:40,661 | INFO     | [payload] control thread has finished
[2026-03-15 00:13:31] 2026-03-15 04:12:40,884 | INFO     | [data] control thread has finished
[2026-03-15 00:13:31] 2026-03-15 04:12:41,055 | INFO     | [payload] execute_payloads thread has finished
[2026-03-15 00:13:31] 2026-03-15 04:12:41,077 | INFO     | [payload] failed_post thread has finished
[2026-03-15 00:13:31] 2026-03-15 04:12:41,269 | INFO     | [job] control thread has finished
[2026-03-15 00:13:31] 2026-03-15 04:12:41,277 | INFO     | [job] create_data_payload thread has finished
[2026-03-15 00:13:31] 2026-03-15 04:12:41,309 | INFO     | [job] validate thread has finished
[2026-03-15 00:13:31] 2026-03-15 04:12:41,686 | INFO     | [data] copytool_out thread has finished
[2026-03-15 00:13:31] 2026-03-15 04:12:41,819 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-15 00:13:31] 2026-03-15 04:12:42,824 | INFO     | [job] queue monitor thread has finished
[2026-03-15 00:13:31] 2026-03-15 04:12:42,928 | INFO     | [data] queue_monitor thread has finished
[2026-03-15 00:13:31] 2026-03-15 04:12:49,068 | INFO     | job.realtimelogging is not enabled
[2026-03-15 00:13:31] 2026-03-15 04:12:50,074 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-15 00:13:31] 2026-03-15 04:13:09,878 | INFO     | PID=1988147 has CPU usage=4.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-15 00:13:31] 2026-03-15 04:13:09,879 | INFO     | .. there are 2 such processes running
[2026-03-15 00:13:31] 2026-03-15 04:13:09,879 | INFO     | found 0 job(s) in 20 queues
[2026-03-15 00:13:31] 2026-03-15 04:13:09,879 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-15 00:13:31] 2026-03-15 04:13:09,879 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-15 00:13:31] 2026-03-15 04:13:26,153 | INFO     | [monitor] cgroup control has ended
[2026-03-15 00:13:31] 2026-03-15 04:13:26,336 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 135343301871424)>', '<ExcThread(monitor, started 135343027537664)>']
[2026-03-15 00:13:31] 2026-03-15 04:13:26,964 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-15 00:13:31] 2026-03-15 04:13:26,965 | INFO     | [monitor] control thread has ended
[2026-03-15 00:13:31] 2026-03-15 04:13:31,361 | INFO     | all workflow threads have been joined
[2026-03-15 00:13:31] 2026-03-15 04:13:31,361 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-15 00:13:31] 2026-03-15 04:13:31,362 | INFO     | traces error code: 0
[2026-03-15 00:13:31] 2026-03-15 04:13:31,362 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-15 00:13:31] 2026-03-15 04:13:31,447 [wrapper] ==== pilot stdout END ====
[2026-03-15 00:13:31] 2026-03-15 04:13:31,451 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-15 00:13:31] 2026-03-15 04:13:31,454 [wrapper] pilotpid: 1988147
[2026-03-15 00:13:31] 2026-03-15 04:13:31,457 [wrapper] Pilot exit status: 0
[2026-03-15 00:13:31] 2026-03-15 04:13:31,467 [wrapper] pandaids: 7055274492
[2026-03-15 00:13:31] 2026-03-15 04:13:31,509 [wrapper] cleanup supervisor_pilot 2015815 1988148
[2026-03-15 00:13:31] 2026-03-15 04:13:31,513 [wrapper] Test setup, not cleaning
[2026-03-15 00:13:31] 2026-03-15 04:13:31,516 [wrapper] apfmon messages muted
[2026-03-15 00:13:31] 2026-03-15 04:13:31,520 [wrapper] ==== wrapper stdout END ====
[2026-03-15 00:13:31] 2026-03-15 04:13:31,522 [wrapper] ==== wrapper stderr END ====
[2026-03-15 00:13:31]  *** Error codes and diagnostics ***
[2026-03-15 00:13:31]     "exeErrorCode": 0,
[2026-03-15 00:13:31]     "exeErrorDiag": "",
[2026-03-15 00:13:31]     "pilotErrorCode": 0,
[2026-03-15 00:13:31]     "pilotErrorDiag": "",
[2026-03-15 00:13:31]  *** Listing of results directory ***
[2026-03-15 00:13:31] total 617548
[2026-03-15 00:13:31] -rw-r--r-- 1 whitlerd whitlerd      5111 Mar 14 18:37 queuedata.json
[2026-03-15 00:13:31] -rwx------ 1 whitlerd whitlerd     36322 Mar 14 18:37 runpilot2-wrapper.sh
[2026-03-15 00:13:31] -rw-r--r-- 1 whitlerd whitlerd    585013 Mar 14 18:37 pilot3.tar.gz
[2026-03-15 00:13:31] -rw-rw-r-- 1 whitlerd whitlerd       100 Mar 14 22:38 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-15 00:13:31] -rwxr-xr-x 1 whitlerd whitlerd      7986 Mar 14 22:38 run_atlas
[2026-03-15 00:13:31] -rw-rw-r-- 1 whitlerd whitlerd       105 Mar 14 22:38 job.xml
[2026-03-15 00:13:31] -rw-r--r-- 2 whitlerd whitlerd 444274989 Mar 14 22:38 EVNT.46701403._001894.pool.root.1
[2026-03-15 00:13:31] -rw-r--r-- 2 whitlerd whitlerd    597533 Mar 14 22:38 input.tar.gz
[2026-03-15 00:13:31] -rw-r--r-- 2 whitlerd whitlerd     15845 Mar 14 22:38 start_atlas.sh
[2026-03-15 00:13:31] drwxrwx--x 2 whitlerd whitlerd      4096 Mar 14 22:38 shared
[2026-03-15 00:13:31] -rw-rw-r-- 1 whitlerd whitlerd      9344 Mar 14 22:38 init_data.xml
[2026-03-15 00:13:31] -rw-rw-r-- 1 whitlerd whitlerd         0 Mar 14 22:38 boinc_setup_complete
[2026-03-15 00:13:31] -rw-rw-r-- 1 whitlerd whitlerd         0 Mar 14 22:38 boinc_lockfile
[2026-03-15 00:13:31] -rw-rw-r-- 1 whitlerd whitlerd      2561 Mar 14 22:38 pandaJob.out
[2026-03-15 00:13:31] -rw------- 1 whitlerd whitlerd   1006481 Mar 14 22:38 agis_schedconf.cvmfs.json
[2026-03-15 00:13:31] -rw------- 1 whitlerd whitlerd   1511579 Mar 14 22:38 agis_ddmendpoints.agis.ALL.json
[2026-03-15 00:13:31] -rw------- 1 whitlerd whitlerd       439 Mar 14 22:38 workernode_map.json
[2026-03-15 00:13:31] drwx------ 5 whitlerd whitlerd      4096 Mar 14 22:38 pilot3
[2026-03-15 00:13:31] -rw-rw-r-- 1 whitlerd whitlerd       530 Mar 15 00:12 boinc_task_state.xml
[2026-03-15 00:13:31] -rw------- 1 whitlerd whitlerd 181831647 Mar 15 00:12 HITS.48955010._052034.pool.root.1
[2026-03-15 00:13:31] -rw------- 1 whitlerd whitlerd      1043 Mar 15 00:12 memory_monitor_summary.json
[2026-03-15 00:13:31] -rw------- 1 whitlerd whitlerd        95 Mar 15 00:12 pilot_heartbeat.json
[2026-03-15 00:13:31] -rw------- 1 whitlerd whitlerd    321845 Mar 15 00:12 log.48955010._052034.job.log.tgz.1
[2026-03-15 00:13:31] -rw------- 1 whitlerd whitlerd      6350 Mar 15 00:12 heartbeat.json
[2026-03-15 00:13:31] -rw-rw-r-- 1 whitlerd whitlerd      8192 Mar 15 00:13 boinc_mmap_file
[2026-03-15 00:13:31] -rw-rw-r-- 1 whitlerd whitlerd        27 Mar 15 00:13 wrapper_checkpoint.txt
[2026-03-15 00:13:31] -rw------- 1 whitlerd whitlerd      4909 Mar 15 00:13 pilotlog.txt
[2026-03-15 00:13:31] -rw------- 1 whitlerd whitlerd    837363 Mar 15 00:13 log.48955010._052034.job.log.1
[2026-03-15 00:13:31] -rw------- 1 whitlerd whitlerd       357 Mar 15 00:13 output.list
[2026-03-15 00:13:31] -rw-rw-r-- 1 whitlerd whitlerd       620 Mar 15 00:13 runtime_log
[2026-03-15 00:13:31] -rw------- 1 whitlerd whitlerd   1177600 Mar 15 00:13 result.tar.gz
[2026-03-15 00:13:31] -rw-rw-r-- 1 whitlerd whitlerd      9040 Mar 15 00:13 runtime_log.err
[2026-03-15 00:13:31] -rw------- 1 whitlerd whitlerd       649 Mar 15 00:13 1F6NDmInmL9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmKiuLDm00gpFo.diag
[2026-03-15 00:13:31] -rw-rw-r-- 1 whitlerd whitlerd     21585 Mar 15 00:13 stderr.txt
[2026-03-15 00:13:31] HITS file was successfully produced:
[2026-03-15 00:13:31] -rw------- 1 whitlerd whitlerd 181831647 Mar 15 00:12 shared/HITS.pool.root.1
[2026-03-15 00:13:31]  *** Contents of shared directory: ***
[2026-03-15 00:13:31] total 613196
[2026-03-15 00:13:31] -rw-r--r-- 2 whitlerd whitlerd 444274989 Mar 14 22:38 ATLAS.root_0
[2026-03-15 00:13:31] -rw-r--r-- 2 whitlerd whitlerd    597533 Mar 14 22:38 input.tar.gz
[2026-03-15 00:13:31] -rw-r--r-- 2 whitlerd whitlerd     15845 Mar 14 22:38 start_atlas.sh
[2026-03-15 00:13:31] -rw------- 1 whitlerd whitlerd 181831647 Mar 15 00:12 HITS.pool.root.1
[2026-03-15 00:13:31] -rw------- 1 whitlerd whitlerd   1177600 Mar 15 00:13 result.tar.gz
00:13:33 (1984224): run_atlas exited; CPU time 21839.459315
00:13:33 (1984224): called boinc_finish(0)

</stderr_txt>
]]>

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