Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:31:36 (289448): wrapper (7.7.26015): starting
06:31:36 (289448): wrapper: running run_atlas (--nthreads 4)
[2026-03-16 06:31:36] Arguments: --nthreads 4
[2026-03-16 06:31:36] Threads: 4
[2026-03-16 06:31:36] Checking for CVMFS
[2026-03-16 06:31:36] No cvmfs_config command found, will try listing directly
[2026-03-16 06:31:36] CVMFS is ok
[2026-03-16 06:31:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-16 06:31:36] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-16 06:31:36] Further information can be found at the LHC@home message board.
[2026-03-16 06:31:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-16 06:31:36] Checking for apptainer binary...
[2026-03-16 06:31:36] which: no apptainer in ((null))
[2026-03-16 06:31:36] apptainer is not installed, using version from CVMFS
[2026-03-16 06:31:36] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-16 06:31:37] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot32/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut09.grid.cesnet.cz
[2026-03-16 06:31:37] apptainer works
[2026-03-16 06:31:37] Set ATHENA_PROC_NUMBER=4
[2026-03-16 06:31:37] Set ATHENA_CORE_NUMBER=4
[2026-03-16 06:31:37] Starting ATLAS job with PandaID=7055232164
[2026-03-16 06:31:37] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot32/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-16 09:55:17]  *** The last 200 lines of the pilot log: ***
[2026-03-16 09:55:17] 2026-03-16 08:54:31,528 | INFO     | job 7055232164 has state=finished
[2026-03-16 09:55:17] 2026-03-16 08:54:31,528 | INFO     | preparing for final server update for job 7055232164 in state='finished'
[2026-03-16 09:55:17] 2026-03-16 08:54:31,528 | INFO     | reading metadata from: /var/lib/boinc/var/slot32/slots/0/PanDA_Pilot-7055232164/jobReport.json
[2026-03-16 09:55:17] 2026-03-16 08:54:31,531 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot32/slots/0/workernode_map.json
[2026-03-16 09:55:17] 2026-03-16 08:54:31,531 | INFO     | this job has now completed (state=finished)
[2026-03-16 09:55:17] 2026-03-16 08:54:31,532 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-16 09:55:17] 2026-03-16 08:54:31,532 | INFO     | log transfer has been attempted: DONE
[2026-03-16 09:55:17] 2026-03-16 08:54:31,532 | INFO     | job 7055232164 has finished - writing final server update
[2026-03-16 09:55:17] 2026-03-16 08:54:31,532 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_568057/.job.ad'
[2026-03-16 09:55:17] 2026-03-16 08:54:31,532 | INFO     | total number of processed events: 400 (read)
[2026-03-16 09:55:17] 2026-03-16 08:54:31,544 | INFO     | using path: /var/lib/boinc/var/slot32/slots/0/PanDA_Pilot-7055232164/memory_monitor_summary.json (trf name=prmon)
[2026-03-16 09:55:17] 2026-03-16 08:54:31,545 | INFO     | extracted standard info from prmon json
[2026-03-16 09:55:17] 2026-03-16 08:54:31,545 | INFO     | extracted standard memory fields from prmon json
[2026-03-16 09:55:17] 2026-03-16 08:54:31,545 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-16 09:55:17] 2026-03-16 08:54:31,545 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-16 09:55:17] 2026-03-16 08:54:31,545 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-16 09:55:17] 2026-03-16 08:54:31,549 | INFO     | fitting pss+swap vs Time
[2026-03-16 09:55:17] 2026-03-16 08:54:31,550 | INFO     | sum of square deviations: 2443580700.0
[2026-03-16 09:55:17] 2026-03-16 08:54:31,551 | INFO     | sum of deviations: -30195711626.0
[2026-03-16 09:55:17] 2026-03-16 08:54:31,551 | INFO     | mean x: 1773645175.0
[2026-03-16 09:55:17] 2026-03-16 08:54:31,551 | INFO     | mean y: 2376953.638190955
[2026-03-16 09:55:17] 2026-03-16 08:54:31,551 | INFO     | intersect: 21919589768.0733
[2026-03-16 09:55:17] 2026-03-16 08:54:31,552 | INFO     | chi2: 1.4892055431212414
[2026-03-16 09:55:17] 2026-03-16 08:54:31,552 | INFO     | sum of square deviations: 2263977332.5
[2026-03-16 09:55:17] 2026-03-16 08:54:31,553 | INFO     | sum of deviations: -29189429853.500008
[2026-03-16 09:55:17] 2026-03-16 08:54:31,553 | INFO     | mean x: 1773645022.5
[2026-03-16 09:55:17] 2026-03-16 08:54:31,553 | INFO     | mean y: 2377808.2422680412
[2026-03-16 09:55:17] 2026-03-16 08:54:31,553 | INFO     | intersect: 22869959663.44761
[2026-03-16 09:55:17] 2026-03-16 08:54:31,554 | INFO     | chi2: 1.4852798969559926
[2026-03-16 09:55:17] 2026-03-16 08:54:31,554 | INFO     | current chi2=1.4852798969559926 (change=0.26360673873272167 %)
[2026-03-16 09:55:17] 2026-03-16 08:54:31,554 | INFO     | right removable region: 193
[2026-03-16 09:55:17] 2026-03-16 08:54:31,554 | INFO     | sum of square deviations: 2263977332.5
[2026-03-16 09:55:17] 2026-03-16 08:54:31,555 | INFO     | sum of deviations: -51018393100.00002
[2026-03-16 09:55:17] 2026-03-16 08:54:31,556 | INFO     | mean x: 1773645327.5
[2026-03-16 09:55:17] 2026-03-16 08:54:31,556 | INFO     | mean y: 2394327.7216494847
[2026-03-16 09:55:17] 2026-03-16 08:54:31,556 | INFO     | intersect: 39971228484.93081
[2026-03-16 09:55:17] 2026-03-16 08:54:31,556 | INFO     | chi2: 0.2542322588120052
[2026-03-16 09:55:17] 2026-03-16 08:54:31,556 | INFO     | current chi2=0.2542322588120052 (change=82.92832980737117 %)
[2026-03-16 09:55:17] 2026-03-16 08:54:31,557 | INFO     | sum of square deviations: 2093397390.0
[2026-03-16 09:55:17] 2026-03-16 08:54:31,558 | INFO     | sum of deviations: -42900052000.99999
[2026-03-16 09:55:17] 2026-03-16 08:54:31,558 | INFO     | mean x: 1773645480.0
[2026-03-16 09:55:17] 2026-03-16 08:54:31,558 | INFO     | mean y: 2387049.746031746
[2026-03-16 09:55:17] 2026-03-16 08:54:31,558 | INFO     | intersect: 36349754103.3271
[2026-03-16 09:55:17] 2026-03-16 08:54:31,558 | INFO     | chi2: 0.23326459657709378
[2026-03-16 09:55:17] 2026-03-16 08:54:31,559 | INFO     | current chi2=0.23326459657709378 (change=8.247443630045455 %)
[2026-03-16 09:55:17] 2026-03-16 08:54:31,559 | INFO     | left removable region: 20
[2026-03-16 09:55:17] 2026-03-16 08:54:31,559 | INFO     | sum of square deviations: 1605470102.0
[2026-03-16 09:55:17] 2026-03-16 08:54:31,560 | INFO     | sum of deviations: -22642321783.0
[2026-03-16 09:55:17] 2026-03-16 08:54:31,560 | INFO     | mean x: 1773645602.0
[2026-03-16 09:55:17] 2026-03-16 08:54:31,560 | INFO     | mean y: 2369022.572254335
[2026-03-16 09:55:17] 2026-03-16 08:54:31,560 | INFO     | intersect: 25016509366.549057
[2026-03-16 09:55:17] 2026-03-16 08:54:31,560 | INFO     | chi2: 0.1287917793119615
[2026-03-16 09:55:17] 2026-03-16 08:54:31,561 | INFO     | current memory leak: -14.10 B/s (using 173 data points, chi2=0.13)
[2026-03-16 09:55:17] 2026-03-16 08:54:31,561 | INFO     | could have reported an average CPU frequency of 2610 MHz (10 samples)
[2026-03-16 09:55:17] 2026-03-16 08:54:31,561 | INFO     | ..............................
[2026-03-16 09:55:17] 2026-03-16 08:54:31,561 | INFO     | . Timing measurements:
[2026-03-16 09:55:17] 2026-03-16 08:54:31,561 | INFO     | . get job = 0 s
[2026-03-16 09:55:17] 2026-03-16 08:54:31,562 | INFO     | . initial setup = 6 s
[2026-03-16 09:55:17] 2026-03-16 08:54:31,562 | INFO     | . payload setup = 6 s
[2026-03-16 09:55:17] 2026-03-16 08:54:31,562 | INFO     | . stage-in = 0 s
[2026-03-16 09:55:17] 2026-03-16 08:54:31,562 | INFO     | . payload execution = 12129 s
[2026-03-16 09:55:17] 2026-03-16 08:54:31,562 | INFO     | . stage-out = 1 s
[2026-03-16 09:55:17] 2026-03-16 08:54:31,562 | INFO     | . log creation = 0 s
[2026-03-16 09:55:17] 2026-03-16 08:54:31,562 | INFO     | ..............................
[2026-03-16 09:55:17] 2026-03-16 08:54:31,595 | INFO     | time since job start (12158s) is within the limit (345600.0s)
[2026-03-16 09:55:17] 2026-03-16 08:54:32,059 | INFO     | 
[2026-03-16 09:55:17] 2026-03-16 08:54:32,059 | INFO     | job summary report
[2026-03-16 09:55:17] 2026-03-16 08:54:32,059 | INFO     | --------------------------------------------------
[2026-03-16 09:55:17] 2026-03-16 08:54:32,059 | INFO     | PanDA job id: 7055232164
[2026-03-16 09:55:17] 2026-03-16 08:54:32,060 | INFO     | task id: 48967094
[2026-03-16 09:55:17] 2026-03-16 08:54:32,060 | INFO     | errors: (none)
[2026-03-16 09:55:17] 2026-03-16 08:54:32,060 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-16 09:55:17] 2026-03-16 08:54:32,060 | INFO     | pilot state: finished 
[2026-03-16 09:55:17] 2026-03-16 08:54:32,060 | INFO     | transexitcode: 0
[2026-03-16 09:55:17] 2026-03-16 08:54:32,060 | INFO     | exeerrorcode: 0
[2026-03-16 09:55:17] 2026-03-16 08:54:32,060 | INFO     | exeerrordiag: 
[2026-03-16 09:55:17] 2026-03-16 08:54:32,060 | INFO     | exitcode: 0
[2026-03-16 09:55:17] 2026-03-16 08:54:32,060 | INFO     | exitmsg: OK
[2026-03-16 09:55:17] 2026-03-16 08:54:32,060 | INFO     | cpuconsumptiontime: 46976 s
[2026-03-16 09:55:17] 2026-03-16 08:54:32,060 | INFO     | nevents: 400
[2026-03-16 09:55:17] 2026-03-16 08:54:32,060 | INFO     | neventsw: 0
[2026-03-16 09:55:17] 2026-03-16 08:54:32,060 | INFO     | pid: 298682
[2026-03-16 09:55:17] 2026-03-16 08:54:32,061 | INFO     | pgrp: 298682
[2026-03-16 09:55:17] 2026-03-16 08:54:32,061 | INFO     | corecount: 4
[2026-03-16 09:55:17] 2026-03-16 08:54:32,061 | INFO     | event service: False
[2026-03-16 09:55:17] 2026-03-16 08:54:32,061 | INFO     | sizes: {0: 2279135, 1: 2280264, 12: 2280264, 12139: 2309876, 12141: 2318896, 12145: 2318952, 12147: 2319274}
[2026-03-16 09:55:17] 2026-03-16 08:54:32,061 | INFO     | --------------------------------------------------
[2026-03-16 09:55:17] 2026-03-16 08:54:32,061 | INFO     | 
[2026-03-16 09:55:17] 2026-03-16 08:54:32,061 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot32/slots/0
[2026-03-16 09:55:17] 2026-03-16 08:54:32,082 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-16 09:55:17] 2026-03-16 08:54:32,082 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-16 09:55:17] 2026-03-16 08:54:32,082 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-16 09:55:17] 2026-03-16 08:54:32,082 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-16 09:55:17] 2026-03-16 08:54:32,082 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-16 09:55:17] 2026-03-16 08:54:32,082 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-16 09:55:17] 2026-03-16 08:54:32,082 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-16 09:55:17] 2026-03-16 08:54:32,083 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-16 09:55:17] 2026-03-16 08:54:32,083 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-16 09:55:17] 2026-03-16 08:54:32,083 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-16 09:55:17] 2026-03-16 08:54:32,083 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-16 09:55:17] 2026-03-16 08:54:32,083 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-16 09:55:17] 2026-03-16 08:54:32,083 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-16 09:55:17] 2026-03-16 08:54:32,083 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-16 09:55:17] 2026-03-16 08:54:32,083 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-16 09:55:17] 2026-03-16 08:54:32,083 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-16 09:55:17] 2026-03-16 08:54:32,083 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-16 09:55:17] 2026-03-16 08:54:32,083 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-16 09:55:17] 2026-03-16 08:54:32,083 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-16 09:55:17] 2026-03-16 08:54:32,084 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-16 09:55:17] 2026-03-16 08:54:32,084 | INFO     | job 7055232164 has completed (purged errors)
[2026-03-16 09:55:17] 2026-03-16 08:54:32,084 | INFO     | overall cleanup function is called
[2026-03-16 09:55:17] 2026-03-16 08:54:33,092 | INFO     | --- collectZombieJob: --- 10, [298682]
[2026-03-16 09:55:17] 2026-03-16 08:54:33,092 | INFO     | zombie collector waiting for pid 298682
[2026-03-16 09:55:17] 2026-03-16 08:54:33,092 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-16 09:55:17] 2026-03-16 08:54:33,092 | INFO     | collected zombie processes
[2026-03-16 09:55:17] 2026-03-16 08:54:33,092 | INFO     | will attempt to kill all subprocesses of pid=298682
[2026-03-16 09:55:17] 2026-03-16 08:54:33,425 | INFO     | process IDs to be killed: [298682] (in reverse order)
[2026-03-16 09:55:17] 2026-03-16 08:54:33,536 | WARNING  | found no corresponding commands to process id(s)
[2026-03-16 09:55:17] 2026-03-16 08:54:33,537 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-16 09:55:17] 2026-03-16 08:54:33,548 | INFO     | did not find any defunct processes belonging to 298682
[2026-03-16 09:55:17] 2026-03-16 08:54:33,559 | INFO     | did not find any defunct processes belonging to 298682
[2026-03-16 09:55:17] 2026-03-16 08:54:33,559 | INFO     | ready for new job
[2026-03-16 09:55:17] 2026-03-16 08:54:33,560 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-16 09:55:17] 2026-03-16 08:54:33,562 | INFO     | **************************************
[2026-03-16 09:55:17] 2026-03-16 08:54:33,562 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-16 09:55:17] 2026-03-16 08:54:33,562 | INFO     | **************************************
[2026-03-16 09:55:17] 2026-03-16 08:54:33,562 | INFO     | 
[2026-03-16 09:55:17] 2026-03-16 08:54:33,566 | INFO     | architecture information:
[2026-03-16 09:55:17] 2026-03-16 08:54:33,566 | INFO     | executing command: cat /etc/os-release
[2026-03-16 09:55:17] 2026-03-16 08:54:33,584 | INFO     | cat /etc/os-release:
[2026-03-16 09:55:17] NAME="CentOS Linux"
[2026-03-16 09:55:17] VERSION="7 (Core)"
[2026-03-16 09:55:17] ID="centos"
[2026-03-16 09:55:17] ID_LIKE="rhel fedora"
[2026-03-16 09:55:17] VERSION_ID="7"
[2026-03-16 09:55:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-16 09:55:17] ANSI_COLOR="0;31"
[2026-03-16 09:55:17] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-16 09:55:17] HOME_URL="https://www.centos.org/"
[2026-03-16 09:55:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-16 09:55:17] 
[2026-03-16 09:55:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-16 09:55:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-16 09:55:17] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-16 09:55:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-16 09:55:17] 
[2026-03-16 09:55:17] 2026-03-16 08:54:33,584 | INFO     | **************************************
[2026-03-16 09:55:17] 2026-03-16 08:54:34,087 | INFO     | executing command: df -mP /var/lib/boinc/var/slot32/slots/0
[2026-03-16 09:55:17] 2026-03-16 08:54:34,106 | INFO     | sufficient remaining disk space (62380834816 B)
[2026-03-16 09:55:17] 2026-03-16 08:54:34,106 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-16 09:55:17] 2026-03-16 08:54:34,107 | INFO     | current server update state: UPDATING_FINAL
[2026-03-16 09:55:17] 2026-03-16 08:54:34,107 | INFO     | update_server=False
[2026-03-16 09:55:17] 2026-03-16 08:54:34,107 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-16 09:55:17] 2026-03-16 08:54:34,107 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-16 09:55:17] 2026-03-16 08:54:34,107 | INFO     | aborting loop
[2026-03-16 09:55:17] 2026-03-16 08:54:34,408 | INFO     | all job control threads have been joined
[2026-03-16 09:55:17] 2026-03-16 08:54:34,448 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-16 09:55:17] 2026-03-16 08:54:34,715 | INFO     | all data control threads have been joined
[2026-03-16 09:55:17] 2026-03-16 08:54:34,869 | INFO     | all payload control threads have been joined
[2026-03-16 09:55:17] 2026-03-16 08:54:35,112 | INFO     | [job] retrieve thread has finished
[2026-03-16 09:55:17] 2026-03-16 08:54:35,113 | INFO     | [job] job monitor thread has finished
[2026-03-16 09:55:17] 2026-03-16 08:54:35,150 | INFO     | [payload] validate_pre thread has finished
[2026-03-16 09:55:17] 2026-03-16 08:54:35,219 | INFO     | [payload] failed_post thread has finished
[2026-03-16 09:55:17] 2026-03-16 08:54:35,224 | INFO     | [payload] execute_payloads thread has finished
[2026-03-16 09:55:17] 2026-03-16 08:54:35,414 | INFO     | [job] control thread has finished
[2026-03-16 09:55:17] 2026-03-16 08:54:35,721 | INFO     | [data] control thread has finished
[2026-03-16 09:55:17] 2026-03-16 08:54:35,793 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-16 09:55:17] 2026-03-16 08:54:35,837 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-16 09:55:17] 2026-03-16 08:54:35,842 | INFO     | [data] copytool_in thread has finished
[2026-03-16 09:55:17] 2026-03-16 08:54:35,874 | INFO     | [payload] control thread has finished
[2026-03-16 09:55:17] 2026-03-16 08:54:36,055 | INFO     | [payload] validate_post thread has finished
[2026-03-16 09:55:17] 2026-03-16 08:54:36,430 | INFO     | [job] validate thread has finished
[2026-03-16 09:55:17] 2026-03-16 08:54:36,431 | INFO     | [job] create_data_payload thread has finished
[2026-03-16 09:55:17] 2026-03-16 08:54:36,454 | INFO     | [data] copytool_out thread has finished
[2026-03-16 09:55:17] 2026-03-16 08:54:36,675 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-16 09:55:17] 2026-03-16 08:54:37,679 | INFO     | [job] queue monitor thread has finished
[2026-03-16 09:55:17] 2026-03-16 08:54:39,799 | INFO     | [data] queue_monitor thread has finished
[2026-03-16 09:55:17] 2026-03-16 08:55:05,225 | INFO     | PID=293731 has CPU usage=6.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-16 09:55:17] 2026-03-16 08:55:05,226 | INFO     | .. there are 8 such processes running
[2026-03-16 09:55:17] 2026-03-16 08:55:05,227 | INFO     | found 0 job(s) in 20 queues
[2026-03-16 09:55:17] 2026-03-16 08:55:05,227 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-16 09:55:17] 2026-03-16 08:55:05,227 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-16 09:55:17] 2026-03-16 08:55:10,961 | INFO     | [monitor] cgroup control has ended
[2026-03-16 09:55:17] 2026-03-16 08:55:11,948 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22371246667584)>', '<ExcThread(monitor, started 22370926429952)>']
[2026-03-16 09:55:17] 2026-03-16 08:55:12,245 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-16 09:55:17] 2026-03-16 08:55:12,245 | INFO     | [monitor] control thread has ended
[2026-03-16 09:55:17] 2026-03-16 08:55:16,972 | INFO     | all workflow threads have been joined
[2026-03-16 09:55:17] 2026-03-16 08:55:16,973 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-16 09:55:17] 2026-03-16 08:55:16,973 | INFO     | traces error code: 0
[2026-03-16 09:55:17] 2026-03-16 08:55:16,973 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-16 09:55:17] 2026-03-16 08:55:17,147 [wrapper] ==== pilot stdout END ====
[2026-03-16 09:55:17] 2026-03-16 08:55:17,150 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-16 09:55:17] 2026-03-16 08:55:17,153 [wrapper] pilotpid: 293731
[2026-03-16 09:55:17] 2026-03-16 08:55:17,155 [wrapper] Pilot exit status: 0
[2026-03-16 09:55:17] 2026-03-16 08:55:17,166 [wrapper] pandaids: 7055232164
[2026-03-16 09:55:17] 2026-03-16 08:55:17,249 [wrapper] cleanup supervisor_pilot  509777 293732
[2026-03-16 09:55:17] 2026-03-16 08:55:17,252 [wrapper] Test setup, not cleaning
[2026-03-16 09:55:17] 2026-03-16 08:55:17,255 [wrapper] apfmon messages muted
[2026-03-16 09:55:17] 2026-03-16 08:55:17,258 [wrapper] ==== wrapper stdout END ====
[2026-03-16 09:55:17] 2026-03-16 08:55:17,260 [wrapper] ==== wrapper stderr END ====
[2026-03-16 09:55:17]  *** Error codes and diagnostics ***
[2026-03-16 09:55:17]     "exeErrorCode": 0,
[2026-03-16 09:55:17]     "exeErrorDiag": "",
[2026-03-16 09:55:17]     "pilotErrorCode": 0,
[2026-03-16 09:55:17]     "pilotErrorDiag": "",
[2026-03-16 09:55:17]  *** Listing of results directory ***
[2026-03-16 09:55:17] total 428952
[2026-03-16 09:55:17] -rw-r--r--. 1 boinc boinc    585013 Mar 14 22:44 pilot3.tar.gz
[2026-03-16 09:55:17] -rwx------. 1 boinc boinc     36322 Mar 14 22:47 runpilot2-wrapper.sh
[2026-03-16 09:55:17] -rw-r--r--. 1 boinc boinc      5111 Mar 14 22:48 queuedata.json
[2026-03-16 09:55:17] -rw-r--r--. 1 boinc boinc       100 Mar 16 06:31 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-16 09:55:17] -rwxr-xr-x. 1 boinc boinc      7986 Mar 16 06:31 run_atlas
[2026-03-16 09:55:17] -rw-r--r--. 1 boinc boinc       105 Mar 16 06:31 job.xml
[2026-03-16 09:55:17] -rw-r--r--. 1 boinc boinc      6563 Mar 16 06:31 init_data.xml
[2026-03-16 09:55:17] -rw-r--r--. 2 boinc boinc 220722994 Mar 16 06:31 EVNT.48967092._000351.pool.root.1
[2026-03-16 09:55:17] -rw-r--r--. 2 boinc boinc     15845 Mar 16 06:31 start_atlas.sh
[2026-03-16 09:55:17] drwxrwx--x. 2 boinc boinc      4096 Mar 16 06:31 shared
[2026-03-16 09:55:17] -rw-r--r--. 2 boinc boinc    597534 Mar 16 06:31 input.tar.gz
[2026-03-16 09:55:17] -rw-r--r--. 1 boinc boinc         0 Mar 16 06:31 boinc_lockfile
[2026-03-16 09:55:17] -rw-r--r--. 1 boinc boinc      2598 Mar 16 06:31 pandaJob.out
[2026-03-16 09:55:17] -rw-------. 1 boinc boinc   1006471 Mar 16 06:31 agis_schedconf.cvmfs.json
[2026-03-16 09:55:17] -rw-------. 1 boinc boinc       451 Mar 16 06:31 workernode_map.json
[2026-03-16 09:55:17] drwx------. 5 boinc boinc      4096 Mar 16 06:31 pilot3
[2026-03-16 09:55:17] -rw-------. 1 boinc boinc 210402236 Mar 16 09:53 HITS.48967094._008876.pool.root.1
[2026-03-16 09:55:17] -rw-r--r--. 1 boinc boinc       530 Mar 16 09:53 boinc_task_state.xml
[2026-03-16 09:55:17] -rw-------. 1 boinc boinc      1031 Mar 16 09:54 memory_monitor_summary.json
[2026-03-16 09:55:17] -rw-------. 1 boinc boinc   1511579 Mar 16 09:54 agis_ddmendpoints.agis.ALL.json
[2026-03-16 09:55:17] -rw-------. 1 boinc boinc    373760 Mar 16 09:54 log.48967094._008876.job.log.tgz.1
[2026-03-16 09:55:17] -rw-------. 1 boinc boinc        95 Mar 16 09:54 pilot_heartbeat.json
[2026-03-16 09:55:17] -rw-------. 1 boinc boinc      6398 Mar 16 09:54 heartbeat.json
[2026-03-16 09:55:17] -rw-r--r--. 1 boinc boinc      8192 Mar 16 09:54 boinc_mmap_file
[2026-03-16 09:55:17] -rw-r--r--. 1 boinc boinc        28 Mar 16 09:54 wrapper_checkpoint.txt
[2026-03-16 09:55:17] -rw-------. 1 boinc boinc      4827 Mar 16 09:55 pilotlog.txt
[2026-03-16 09:55:17] -rw-------. 1 boinc boinc   1717757 Mar 16 09:55 log.48967094._008876.job.log.1
[2026-03-16 09:55:17] -rw-------. 1 boinc boinc       357 Mar 16 09:55 output.list
[2026-03-16 09:55:17] -rw-r--r--. 1 boinc boinc       620 Mar 16 09:55 runtime_log
[2026-03-16 09:55:17] -rw-------. 1 boinc boinc   2109440 Mar 16 09:55 result.tar.gz
[2026-03-16 09:55:17] -rw-r--r--. 1 boinc boinc      9205 Mar 16 09:55 runtime_log.err
[2026-03-16 09:55:17] -rw-------. 1 boinc boinc       664 Mar 16 09:55 8yKLDmb0lL9n9Rq4apOajLDm4fhM0noT9bVooX4SDmdurLDmqIw98m.diag
[2026-03-16 09:55:17] -rw-r--r--. 1 boinc boinc     21117 Mar 16 09:55 stderr.txt
[2026-03-16 09:55:17] HITS file was successfully produced:
[2026-03-16 09:55:17] -rw-------. 1 boinc boinc 210402236 Mar 16 09:53 shared/HITS.pool.root.1
[2026-03-16 09:55:17]  *** Contents of shared directory: ***
[2026-03-16 09:55:17] total 423692
[2026-03-16 09:55:17] -rw-r--r--. 2 boinc boinc 220722994 Mar 16 06:31 ATLAS.root_0
[2026-03-16 09:55:17] -rw-r--r--. 2 boinc boinc     15845 Mar 16 06:31 start_atlas.sh
[2026-03-16 09:55:17] -rw-r--r--. 2 boinc boinc    597534 Mar 16 06:31 input.tar.gz
[2026-03-16 09:55:17] -rw-------. 1 boinc boinc 210402236 Mar 16 09:53 HITS.pool.root.1
[2026-03-16 09:55:17] -rw-------. 1 boinc boinc   2109440 Mar 16 09:55 result.tar.gz
09:55:18 (289448): run_atlas exited; CPU time 47487.294289
09:55:18 (289448): called boinc_finish(0)

</stderr_txt>
]]>

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