Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:27:16 (20229): wrapper (7.7.26015): starting
12:27:16 (20229): wrapper: running run_atlas (--nthreads 8)
[2026-03-15 12:27:16] Arguments: --nthreads 8
[2026-03-15 12:27:16] Threads: 8
[2026-03-15 12:27:16] Checking for CVMFS
[2026-03-15 12:27:17] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-15 12:27:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-15 12:27:19] Running cvmfs_config stat atlas.cern.ch
[2026-03-15 12:27:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-15 12:27:20] 2.11.2.0 13854 128953 139364 157312 2 53 22250887 25165825 4792 130560 151 50150857 99.808 38262177 1168 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-03-15 12:27:20] CVMFS is ok
[2026-03-15 12:27:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-15 12:27:20] Checking for apptainer binary...
[2026-03-15 12:27:20] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-15 12:27:20] Running /usr/bin/apptainer --version
[2026-03-15 12:27:20] apptainer version 1.3.2-1.el7
[2026-03-15 12:27:20] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-15 12:27:31] cg-vwn417.simple-grid.lan
[2026-03-15 12:27:31] apptainer works
[2026-03-15 12:27:31] Set ATHENA_PROC_NUMBER=8
[2026-03-15 12:27:31] Set ATHENA_CORE_NUMBER=8
[2026-03-15 12:27:31] Starting ATLAS job with PandaID=7055232232
[2026-03-15 12:27:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-15 17:33:11]  *** The last 200 lines of the pilot log: ***
[2026-03-15 17:33:11] 2026-03-15 16:32:20,796 | INFO     | using path: /var/lib/boinc/slots/6/PanDA_Pilot-7055232232/memory_monitor_summary.json (trf name=prmon)
[2026-03-15 17:33:11] 2026-03-15 16:32:20,796 | INFO     | extracted standard info from prmon json
[2026-03-15 17:33:11] 2026-03-15 16:32:20,796 | INFO     | extracted standard memory fields from prmon json
[2026-03-15 17:33:11] 2026-03-15 16:32:20,796 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-15 17:33:11] 2026-03-15 16:32:20,797 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-15 17:33:11] 2026-03-15 16:32:20,797 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-15 17:33:11] 2026-03-15 16:32:20,803 | INFO     | fitting pss+swap vs Time
[2026-03-15 17:33:11] 2026-03-15 16:32:20,804 | INFO     | sum of square deviations: 7641036290.0
[2026-03-15 17:33:11] 2026-03-15 16:32:20,807 | INFO     | sum of deviations: 98055125331.0
[2026-03-15 17:33:11] 2026-03-15 16:32:20,807 | INFO     | mean x: 1773583458.0
[2026-03-15 17:33:11] 2026-03-15 16:32:20,807 | INFO     | mean y: 2447990.5189003437
[2026-03-15 17:33:11] 2026-03-15 16:32:20,807 | INFO     | intersect: -22757416203.13465
[2026-03-15 17:33:11] 2026-03-15 16:32:20,808 | INFO     | chi2: 6.525597212452931
[2026-03-15 17:33:11] 2026-03-15 16:32:20,808 | INFO     | sum of square deviations: 7253894147.5
[2026-03-15 17:33:11] 2026-03-15 16:32:20,811 | INFO     | sum of deviations: 115263545123.5
[2026-03-15 17:33:11] 2026-03-15 16:32:20,811 | INFO     | mean x: 1773583305.5
[2026-03-15 17:33:11] 2026-03-15 16:32:20,812 | INFO     | mean y: 2454663.458041958
[2026-03-15 17:33:11] 2026-03-15 16:32:20,812 | INFO     | intersect: -28179580420.999405
[2026-03-15 17:33:11] 2026-03-15 16:32:20,812 | INFO     | chi2: 5.803152101701178
[2026-03-15 17:33:11] 2026-03-15 16:32:20,813 | INFO     | current chi2=5.803152101701178 (change=11.070942432258864 %)
[2026-03-15 17:33:11] 2026-03-15 16:32:20,813 | INFO     | right removable region: 285
[2026-03-15 17:33:11] 2026-03-15 16:32:20,813 | INFO     | sum of square deviations: 7253894147.5
[2026-03-15 17:33:11] 2026-03-15 16:32:20,816 | INFO     | sum of deviations: -2078194024.499998
[2026-03-15 17:33:11] 2026-03-15 16:32:20,816 | INFO     | mean x: 1773583610.5
[2026-03-15 17:33:11] 2026-03-15 16:32:20,817 | INFO     | mean y: 2487405.8006993006
[2026-03-15 17:33:11] 2026-03-15 16:32:20,817 | INFO     | intersect: 510607704.545689
[2026-03-15 17:33:11] 2026-03-15 16:32:20,817 | INFO     | chi2: 1.900561184497848
[2026-03-15 17:33:11] 2026-03-15 16:32:20,817 | INFO     | current chi2=1.900561184497848 (change=70.87529121670323 %)
[2026-03-15 17:33:11] 2026-03-15 16:32:20,818 | INFO     | sum of square deviations: 6880054580.0
[2026-03-15 17:33:11] 2026-03-15 16:32:20,821 | INFO     | sum of deviations: -39314027616.0
[2026-03-15 17:33:11] 2026-03-15 16:32:20,821 | INFO     | mean x: 1773583763.0
[2026-03-15 17:33:11] 2026-03-15 16:32:20,821 | INFO     | mean y: 2502485.181494662
[2026-03-15 17:33:11] 2026-03-15 16:32:20,821 | INFO     | intersect: 10137119911.119297
[2026-03-15 17:33:11] 2026-03-15 16:32:20,821 | INFO     | chi2: 0.9337435111711291
[2026-03-15 17:33:11] 2026-03-15 16:32:20,826 | INFO     | current chi2=0.9337435111711291 (change=50.8701156907066 %)
[2026-03-15 17:33:11] 2026-03-15 16:32:20,826 | INFO     | sum of square deviations: 6519285025.0
[2026-03-15 17:33:11] 2026-03-15 16:32:20,829 | INFO     | sum of deviations: -35515275369.0
[2026-03-15 17:33:11] 2026-03-15 16:32:20,830 | INFO     | mean x: 1773583915.5
[2026-03-15 17:33:11] 2026-03-15 16:32:20,830 | INFO     | mean y: 2500855.9782608696
[2026-03-15 17:33:11] 2026-03-15 16:32:20,830 | INFO     | intersect: 9664499205.101173
[2026-03-15 17:33:11] 2026-03-15 16:32:20,830 | INFO     | chi2: 0.9157499044519701
[2026-03-15 17:33:11] 2026-03-15 16:32:20,831 | INFO     | current chi2=0.9157499044519701 (change=1.9270395460730783 %)
[2026-03-15 17:33:11] 2026-03-15 16:32:20,831 | INFO     | left removable region: 30
[2026-03-15 17:33:11] 2026-03-15 16:32:20,831 | INFO     | sum of square deviations: 5141528960.0
[2026-03-15 17:33:11] 2026-03-15 16:32:20,834 | INFO     | sum of deviations: 10613587030.0
[2026-03-15 17:33:11] 2026-03-15 16:32:20,834 | INFO     | mean x: 1773584190.0
[2026-03-15 17:33:11] 2026-03-15 16:32:20,834 | INFO     | mean y: 2495787.1450980394
[2026-03-15 17:33:11] 2026-03-15 16:32:20,834 | INFO     | intersect: -3658689494.9070826
[2026-03-15 17:33:11] 2026-03-15 16:32:20,835 | INFO     | chi2: 0.0007150862413865392
[2026-03-15 17:33:11] 2026-03-15 16:32:20,835 | INFO     | current memory leak: 2.06 B/s (using 255 data points, chi2=0.00)
[2026-03-15 17:33:11] 2026-03-15 16:32:20,835 | INFO     | could have reported an average CPU frequency of 1999 MHz (13 samples)
[2026-03-15 17:33:11] 2026-03-15 16:32:20,836 | INFO     | ..............................
[2026-03-15 17:33:11] 2026-03-15 16:32:20,836 | INFO     | . Timing measurements:
[2026-03-15 17:33:11] 2026-03-15 16:32:20,836 | INFO     | . get job = 0 s
[2026-03-15 17:33:11] 2026-03-15 16:32:20,836 | INFO     | . initial setup = 91 s
[2026-03-15 17:33:11] 2026-03-15 16:32:20,836 | INFO     | . payload setup = 133 s
[2026-03-15 17:33:11] 2026-03-15 16:32:20,836 | INFO     | . stage-in = 0 s
[2026-03-15 17:33:11] 2026-03-15 16:32:20,836 | INFO     | . payload execution = 17834 s
[2026-03-15 17:33:11] 2026-03-15 16:32:20,836 | INFO     | . stage-out = 3 s
[2026-03-15 17:33:11] 2026-03-15 16:32:20,836 | INFO     | . log creation = 1 s
[2026-03-15 17:33:11] 2026-03-15 16:32:20,837 | INFO     | ..............................
[2026-03-15 17:33:11] 2026-03-15 16:32:20,996 | INFO     | 
[2026-03-15 17:33:11] 2026-03-15 16:32:20,996 | INFO     | job summary report
[2026-03-15 17:33:11] 2026-03-15 16:32:20,996 | INFO     | --------------------------------------------------
[2026-03-15 17:33:11] 2026-03-15 16:32:20,996 | INFO     | PanDA job id: 7055232232
[2026-03-15 17:33:11] 2026-03-15 16:32:20,996 | INFO     | task id: 48967094
[2026-03-15 17:33:11] 2026-03-15 16:32:20,997 | INFO     | errors: (none)
[2026-03-15 17:33:11] 2026-03-15 16:32:20,997 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-15 17:33:11] 2026-03-15 16:32:20,997 | INFO     | pilot state: finished 
[2026-03-15 17:33:11] 2026-03-15 16:32:20,997 | INFO     | transexitcode: 0
[2026-03-15 17:33:11] 2026-03-15 16:32:20,997 | INFO     | exeerrorcode: 0
[2026-03-15 17:33:11] 2026-03-15 16:32:20,997 | INFO     | exeerrordiag: 
[2026-03-15 17:33:11] 2026-03-15 16:32:20,997 | INFO     | exitcode: 0
[2026-03-15 17:33:11] 2026-03-15 16:32:20,997 | INFO     | exitmsg: OK
[2026-03-15 17:33:11] 2026-03-15 16:32:20,997 | INFO     | cpuconsumptiontime: 69283 s
[2026-03-15 17:33:11] 2026-03-15 16:32:20,998 | INFO     | nevents: 400
[2026-03-15 17:33:11] 2026-03-15 16:32:20,998 | INFO     | neventsw: 0
[2026-03-15 17:33:11] 2026-03-15 16:32:20,998 | INFO     | pid: 28843
[2026-03-15 17:33:11] 2026-03-15 16:32:20,998 | INFO     | pgrp: 28843
[2026-03-15 17:33:11] 2026-03-15 16:32:20,998 | INFO     | corecount: 8
[2026-03-15 17:33:11] 2026-03-15 16:32:20,998 | INFO     | event service: False
[2026-03-15 17:33:11] 2026-03-15 16:32:20,998 | INFO     | sizes: {0: 2279736, 1: 2280193, 2: 2280281, 12: 2280281, 17972: 2312432, 17977: 2321430, 17978: 2321808}
[2026-03-15 17:33:11] 2026-03-15 16:32:20,998 | INFO     | --------------------------------------------------
[2026-03-15 17:33:11] 2026-03-15 16:32:20,998 | INFO     | 
[2026-03-15 17:33:11] 2026-03-15 16:32:20,999 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2026-03-15 17:33:11] 2026-03-15 16:32:21,018 | INFO     | time since job start (17991s) is within the limit (345600.0s)
[2026-03-15 17:33:11] 2026-03-15 16:32:21,703 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-15 17:33:11] 2026-03-15 16:32:21,703 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-15 17:33:11] 2026-03-15 16:32:21,703 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-15 17:33:11] 2026-03-15 16:32:21,703 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-15 17:33:11] 2026-03-15 16:32:21,703 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-15 17:33:11] 2026-03-15 16:32:21,704 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-15 17:33:11] 2026-03-15 16:32:21,704 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-15 17:33:11] 2026-03-15 16:32:21,704 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-15 17:33:11] 2026-03-15 16:32:21,704 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-15 17:33:11] 2026-03-15 16:32:21,704 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-15 17:33:11] 2026-03-15 16:32:21,704 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-15 17:33:11] 2026-03-15 16:32:21,704 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-15 17:33:11] 2026-03-15 16:32:21,704 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-15 17:33:11] 2026-03-15 16:32:21,704 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-15 17:33:11] 2026-03-15 16:32:21,704 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-15 17:33:11] 2026-03-15 16:32:21,704 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-15 17:33:11] 2026-03-15 16:32:21,704 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-15 17:33:11] 2026-03-15 16:32:21,704 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-15 17:33:11] 2026-03-15 16:32:21,704 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-15 17:33:11] 2026-03-15 16:32:21,705 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-15 17:33:11] 2026-03-15 16:32:21,705 | INFO     | job 7055232232 has completed (purged errors)
[2026-03-15 17:33:11] 2026-03-15 16:32:21,705 | INFO     | overall cleanup function is called
[2026-03-15 17:33:11] 2026-03-15 16:32:22,713 | INFO     | --- collectZombieJob: --- 10, [28843]
[2026-03-15 17:33:11] 2026-03-15 16:32:22,713 | INFO     | zombie collector waiting for pid 28843
[2026-03-15 17:33:11] 2026-03-15 16:32:22,713 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-15 17:33:11] 2026-03-15 16:32:22,713 | INFO     | collected zombie processes
[2026-03-15 17:33:11] 2026-03-15 16:32:22,713 | INFO     | will attempt to kill all subprocesses of pid=28843
[2026-03-15 17:33:11] 2026-03-15 16:32:22,847 | INFO     | process IDs to be killed: [28843] (in reverse order)
[2026-03-15 17:33:11] 2026-03-15 16:32:23,684 | WARNING  | found no corresponding commands to process id(s)
[2026-03-15 17:33:11] 2026-03-15 16:32:23,684 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-15 17:33:11] 2026-03-15 16:32:23,687 | INFO     | did not find any defunct processes belonging to 28843
[2026-03-15 17:33:11] 2026-03-15 16:32:23,689 | INFO     | did not find any defunct processes belonging to 28843
[2026-03-15 17:33:11] 2026-03-15 16:32:23,689 | INFO     | ready for new job
[2026-03-15 17:33:11] 2026-03-15 16:32:23,689 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-15 17:33:11] 2026-03-15 16:32:23,691 | INFO     | **************************************
[2026-03-15 17:33:11] 2026-03-15 16:32:23,691 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-15 17:33:11] 2026-03-15 16:32:23,691 | INFO     | **************************************
[2026-03-15 17:33:11] 2026-03-15 16:32:23,691 | INFO     | 
[2026-03-15 17:33:11] 2026-03-15 16:32:23,691 | INFO     | pilot is running in a VM
[2026-03-15 17:33:11] 2026-03-15 16:32:23,691 | INFO     | architecture information:
[2026-03-15 17:33:11] 2026-03-15 16:32:23,698 | INFO     | executing command: cat /etc/os-release
[2026-03-15 17:33:11] 2026-03-15 16:32:24,003 | INFO     | cat /etc/os-release:
[2026-03-15 17:33:11] NAME="CentOS Linux"
[2026-03-15 17:33:11] VERSION="7 (Core)"
[2026-03-15 17:33:11] ID="centos"
[2026-03-15 17:33:11] ID_LIKE="rhel fedora"
[2026-03-15 17:33:11] VERSION_ID="7"
[2026-03-15 17:33:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-15 17:33:11] ANSI_COLOR="0;31"
[2026-03-15 17:33:11] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-15 17:33:11] HOME_URL="https://www.centos.org/"
[2026-03-15 17:33:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-15 17:33:11] 
[2026-03-15 17:33:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-15 17:33:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-15 17:33:11] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-15 17:33:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-15 17:33:11] 
[2026-03-15 17:33:11] 2026-03-15 16:32:24,004 | INFO     | **************************************
[2026-03-15 17:33:11] 2026-03-15 16:32:24,507 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2026-03-15 17:33:11] 2026-03-15 16:32:24,757 | INFO     | sufficient remaining disk space (495502491648 B)
[2026-03-15 17:33:11] 2026-03-15 16:32:24,757 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-15 17:33:11] 2026-03-15 16:32:24,757 | INFO     | current server update state: UPDATING_FINAL
[2026-03-15 17:33:11] 2026-03-15 16:32:24,758 | INFO     | update_server=False
[2026-03-15 17:33:11] 2026-03-15 16:32:24,758 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-15 17:33:11] 2026-03-15 16:32:24,759 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-15 17:33:11] 2026-03-15 16:32:24,882 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-15 17:33:11] 2026-03-15 16:32:24,882 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-15 17:33:11] 2026-03-15 16:32:24,882 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-15 17:33:11] 2026-03-15 16:32:24,882 | INFO     | will abort loop
[2026-03-15 17:33:11] 2026-03-15 16:32:25,232 | INFO     | all data control threads have been joined
[2026-03-15 17:33:11] 2026-03-15 16:32:25,608 | INFO     | all payload control threads have been joined
[2026-03-15 17:33:11] 2026-03-15 16:32:25,764 | INFO     | [job] retrieve thread has finished
[2026-03-15 17:33:11] 2026-03-15 16:32:25,888 | INFO     | [job] job monitor thread has finished
[2026-03-15 17:33:11] 2026-03-15 16:32:26,014 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-15 17:33:11] 2026-03-15 16:32:26,022 | INFO     | [data] copytool_in thread has finished
[2026-03-15 17:33:11] 2026-03-15 16:32:26,031 | INFO     | [payload] execute_payloads thread has finished
[2026-03-15 17:33:11] 2026-03-15 16:32:26,066 | INFO     | all job control threads have been joined
[2026-03-15 17:33:11] 2026-03-15 16:32:26,238 | INFO     | [data] control thread has finished
[2026-03-15 17:33:11] 2026-03-15 16:32:26,393 | INFO     | [payload] validate_pre thread has finished
[2026-03-15 17:33:11] 2026-03-15 16:32:26,508 | INFO     | [payload] failed_post thread has finished
[2026-03-15 17:33:11] 2026-03-15 16:32:26,615 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-15 17:33:11] 2026-03-15 16:32:26,615 | INFO     | [payload] control thread has finished
[2026-03-15 17:33:11] 2026-03-15 16:32:26,766 | INFO     | [data] copytool_out thread has finished
[2026-03-15 17:33:11] 2026-03-15 16:32:26,795 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-15 17:33:11] 2026-03-15 16:32:26,921 | INFO     | [job] create_data_payload thread has finished
[2026-03-15 17:33:11] 2026-03-15 16:32:26,972 | INFO     | [job] validate thread has finished
[2026-03-15 17:33:11] 2026-03-15 16:32:27,019 | INFO     | [job] queue monitor thread has finished
[2026-03-15 17:33:11] 2026-03-15 16:32:27,072 | INFO     | [job] control thread has finished
[2026-03-15 17:33:11] 2026-03-15 16:32:27,111 | INFO     | [payload] validate_post thread has finished
[2026-03-15 17:33:11] 2026-03-15 16:32:30,804 | INFO     | [data] queue_monitor thread has finished
[2026-03-15 17:33:11] 2026-03-15 16:32:54,233 | INFO     | PID=24335 has CPU usage=5.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-15 17:33:11] 2026-03-15 16:32:54,234 | INFO     | .. there are 9 such processes running
[2026-03-15 17:33:11] 2026-03-15 16:32:54,234 | INFO     | found 0 job(s) in 20 queues
[2026-03-15 17:33:11] 2026-03-15 16:32:54,235 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-15 17:33:11] 2026-03-15 16:32:54,235 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-15 17:33:11] 2026-03-15 16:33:00,748 | INFO     | [monitor] cgroup control has ended
[2026-03-15 17:33:11] 2026-03-15 16:33:01,409 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139916904290112)>', '<ExcThread(monitor, started 139916428154624)>']
[2026-03-15 17:33:11] 2026-03-15 16:33:02,284 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-15 17:33:11] 2026-03-15 16:33:02,284 | INFO     | [monitor] control thread has ended
[2026-03-15 17:33:11] 2026-03-15 16:33:06,435 | INFO     | all workflow threads have been joined
[2026-03-15 17:33:11] 2026-03-15 16:33:06,435 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-15 17:33:11] 2026-03-15 16:33:06,435 | INFO     | traces error code: 0
[2026-03-15 17:33:11] 2026-03-15 16:33:06,435 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-15 17:33:11] 2026-03-15 16:33:06,768 [wrapper] ==== pilot stdout END ====
[2026-03-15 17:33:11] 2026-03-15 16:33:06,889 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-15 17:33:11] 2026-03-15 16:33:07,000 [wrapper] pilotpid: 24335
[2026-03-15 17:33:11] 2026-03-15 16:33:07,110 [wrapper] Pilot exit status: 0
[2026-03-15 17:33:11] 2026-03-15 16:33:07,665 [wrapper] pandaids: 7055232232
[2026-03-15 17:33:11] 2026-03-15 16:33:08,702 [wrapper] cleanup supervisor_pilot  5560 24336
[2026-03-15 17:33:11] 2026-03-15 16:33:08,803 [wrapper] Test setup, not cleaning
[2026-03-15 17:33:11] 2026-03-15 16:33:08,908 [wrapper] apfmon messages muted
[2026-03-15 17:33:11] 2026-03-15 16:33:09,034 [wrapper] ==== wrapper stdout END ====
[2026-03-15 17:33:11] 2026-03-15 16:33:09,148 [wrapper] ==== wrapper stderr END ====
[2026-03-15 17:33:11]  *** Error codes and diagnostics ***
[2026-03-15 17:33:11]     "exeErrorCode": 0,
[2026-03-15 17:33:11]     "exeErrorDiag": "",
[2026-03-15 17:33:11]     "pilotErrorCode": 0,
[2026-03-15 17:33:11]     "pilotErrorDiag": "",
[2026-03-15 17:33:11]  *** Listing of results directory ***
[2026-03-15 17:33:11] total 427404
[2026-03-15 17:33:11] -rw-r--r--. 1 boinc boinc    585013 Mar 14 22:44 pilot3.tar.gz
[2026-03-15 17:33:11] -rwx------. 1 boinc boinc     36322 Mar 14 22:47 runpilot2-wrapper.sh
[2026-03-15 17:33:11] -rw-r--r--. 1 boinc boinc      5111 Mar 14 22:48 queuedata.json
[2026-03-15 17:33:11] -rw-r--r--. 1 boinc boinc       100 Mar 15 12:27 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-15 17:33:11] -rwxr-xr-x. 1 boinc boinc      7986 Mar 15 12:27 run_atlas
[2026-03-15 17:33:11] -rw-r--r--. 1 boinc boinc       105 Mar 15 12:27 job.xml
[2026-03-15 17:33:11] -rw-r--r--. 1 boinc boinc      6390 Mar 15 12:27 init_data.xml
[2026-03-15 17:33:11] -rw-r--r--. 2 boinc boinc 219285267 Mar 15 12:27 EVNT.48967092._000354.pool.root.1
[2026-03-15 17:33:11] -rw-r--r--. 2 boinc boinc     15845 Mar 15 12:27 start_atlas.sh
[2026-03-15 17:33:11] drwxrwx--x. 2 boinc boinc        68 Mar 15 12:27 shared
[2026-03-15 17:33:11] -rw-r--r--. 2 boinc boinc    597538 Mar 15 12:27 input.tar.gz
[2026-03-15 17:33:11] -rw-r--r--. 1 boinc boinc         0 Mar 15 12:27 boinc_lockfile
[2026-03-15 17:33:11] -rw-r--r--. 1 boinc boinc      2598 Mar 15 12:27 pandaJob.out
[2026-03-15 17:33:11] -rw-------. 1 boinc boinc       415 Mar 15 12:32 workernode_map.json
[2026-03-15 17:33:11] -rw-------. 1 boinc boinc   1006481 Mar 15 12:32 agis_schedconf.cvmfs.json
[2026-03-15 17:33:11] drwx------. 5 boinc boinc      4096 Mar 15 12:32 pilot3
[2026-03-15 17:33:11] -rw-------. 1 boinc boinc 208448117 Mar 15 17:30 HITS.48967094._008944.pool.root.1
[2026-03-15 17:33:11] -rw-r--r--. 1 boinc boinc       530 Mar 15 17:31 boinc_task_state.xml
[2026-03-15 17:33:11] -rw-------. 1 boinc boinc      1010 Mar 15 17:32 memory_monitor_summary.json
[2026-03-15 17:33:11] -rw-------. 1 boinc boinc   1511579 Mar 15 17:32 agis_ddmendpoints.agis.ALL.json
[2026-03-15 17:33:11] -rw-------. 1 boinc boinc    504068 Mar 15 17:32 log.48967094._008944.job.log.tgz.1
[2026-03-15 17:33:11] -rw-------. 1 boinc boinc      6314 Mar 15 17:32 heartbeat.json
[2026-03-15 17:33:11] -rw-------. 1 boinc boinc        95 Mar 15 17:32 pilot_heartbeat.json
[2026-03-15 17:33:11] -rw-r--r--. 1 boinc boinc        28 Mar 15 17:32 wrapper_checkpoint.txt
[2026-03-15 17:33:11] -rw-r--r--. 1 boinc boinc      8192 Mar 15 17:32 boinc_mmap_file
[2026-03-15 17:33:11] -rw-------. 1 boinc boinc      5066 Mar 15 17:33 pilotlog.txt
[2026-03-15 17:33:11] -rw-------. 1 boinc boinc   2495992 Mar 15 17:33 log.48967094._008944.job.log.1
[2026-03-15 17:33:11] -rw-------. 1 boinc boinc       357 Mar 15 17:33 output.list
[2026-03-15 17:33:11] -rw-r--r--. 1 boinc boinc       620 Mar 15 17:33 runtime_log
[2026-03-15 17:33:11] -rw-------. 1 boinc boinc   3020800 Mar 15 17:33 result.tar.gz
[2026-03-15 17:33:11] -rw-r--r--. 1 boinc boinc      8816 Mar 15 17:33 runtime_log.err
[2026-03-15 17:33:11] -rw-------. 1 boinc boinc       655 Mar 15 17:33 JxiMDmb0lL9n9Rq4apOajLDm4fhM0noT9bVooX4SDmNvrLDm3lmvkn.diag
[2026-03-15 17:33:11] -rw-r--r--. 1 boinc boinc     20714 Mar 15 17:33 stderr.txt
[2026-03-15 17:33:11] HITS file was successfully produced:
[2026-03-15 17:33:11] -rw-------. 1 boinc boinc 208448117 Mar 15 17:30 shared/HITS.pool.root.1
[2026-03-15 17:33:11]  *** Contents of shared directory: ***
[2026-03-15 17:33:11] total 421264
[2026-03-15 17:33:11] -rw-r--r--. 2 boinc boinc 219285267 Mar 15 12:27 ATLAS.root_0
[2026-03-15 17:33:11] -rw-r--r--. 2 boinc boinc     15845 Mar 15 12:27 start_atlas.sh
[2026-03-15 17:33:11] -rw-r--r--. 2 boinc boinc    597538 Mar 15 12:27 input.tar.gz
[2026-03-15 17:33:11] -rw-------. 1 boinc boinc 208448117 Mar 15 17:30 HITS.pool.root.1
[2026-03-15 17:33:11] -rw-------. 1 boinc boinc   3020800 Mar 15 17:33 result.tar.gz
17:33:12 (20229): run_atlas exited; CPU time 69550.948778
17:33:12 (20229): called boinc_finish(0)

</stderr_txt>
]]>

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