Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
12:25:30 (2786782): wrapper (7.7.26015): starting
12:25:30 (2786782): wrapper: running run_atlas (--nthreads 3)
[2026-03-15 12:25:30] Arguments: --nthreads 3
[2026-03-15 12:25:30] Threads: 3
[2026-03-15 12:25:30] Checking for CVMFS
[2026-03-15 12:25:30] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-15 12:25:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-15 12:25:31] Running cvmfs_config stat atlas.cern.ch
[2026-03-15 12:25:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-15 12:25:31] 2.9.2.0 12764 18784 92320 157312 0 50 30236073 36864000 0 130560 0 7785788 99.983 699751 12597 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-03-15 12:25:31] CVMFS is ok
[2026-03-15 12:25:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-15 12:25:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-15 12:25:31] Further information can be found at the LHC@home message board.
[2026-03-15 12:25:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-15 12:25:31] Checking for apptainer binary...
[2026-03-15 12:25:31] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-15 12:25:31] Running /usr/bin/apptainer --version
[2026-03-15 12:25:31] apptainer version 1.4.1-1.1
[2026-03-15 12:25:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-15 12:25:31] thA327
[2026-03-15 12:25:31] apptainer works
[2026-03-15 12:25:31] Set ATHENA_PROC_NUMBER=3
[2026-03-15 12:25:31] Set ATHENA_CORE_NUMBER=3
[2026-03-15 12:25:31] Starting ATLAS job with PandaID=7047612085
[2026-03-15 12:25:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-15 13:46:54]  *** The last 200 lines of the pilot log: ***
[2026-03-15 13:46:54] 2026-03-15 12:45:59,850 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-15 13:46:54] 2026-03-15 12:46:00,117 | INFO     | all job control threads have been joined
[2026-03-15 13:46:54] 2026-03-15 12:46:00,155 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-15 13:46:54] 2026-03-15 12:46:00,156 | INFO     | aborting loop
[2026-03-15 13:46:54] 2026-03-15 12:46:00,178 | INFO     | all payload control threads have been joined
[2026-03-15 13:46:54] 2026-03-15 12:46:00,205 | INFO     | all data control threads have been joined
[2026-03-15 13:46:54] 2026-03-15 12:46:00,855 | INFO     | [job] retrieve thread has finished
[2026-03-15 13:46:54] 2026-03-15 12:46:00,855 | INFO     | [job] queue monitor thread has finished
[2026-03-15 13:46:54] 2026-03-15 12:46:01,122 | INFO     | [job] control thread has finished
[2026-03-15 13:46:54] 2026-03-15 12:46:01,161 | INFO     | [job] job monitor thread has finished
[2026-03-15 13:46:54] 2026-03-15 12:46:01,183 | INFO     | [payload] control thread has finished
[2026-03-15 13:46:54] 2026-03-15 12:46:01,211 | INFO     | [data] control thread has finished
[2026-03-15 13:46:54] 2026-03-15 12:46:01,228 | INFO     | [payload] execute_payloads thread has finished
[2026-03-15 13:46:54] 2026-03-15 12:46:01,240 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-15 13:46:54] 2026-03-15 12:46:01,317 | INFO     | [payload] failed_post thread has finished
[2026-03-15 13:46:54] 2026-03-15 12:46:01,692 | INFO     | [job] validate thread has finished
[2026-03-15 13:46:54] 2026-03-15 12:46:01,784 | INFO     | [job] create_data_payload thread has finished
[2026-03-15 13:46:54] 2026-03-15 12:46:01,786 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-15 13:46:54] 2026-03-15 12:46:01,789 | INFO     | [payload] validate_pre thread has finished
[2026-03-15 13:46:54] 2026-03-15 12:46:01,793 | INFO     | [payload] validate_post thread has finished
[2026-03-15 13:46:54] 2026-03-15 12:46:01,939 | INFO     | [data] copytool_in thread has finished
[2026-03-15 13:46:54] 2026-03-15 12:46:03,246 | INFO     | [data] copytool_out thread has finished
[2026-03-15 13:46:54] 2026-03-15 12:46:03,856 | INFO     | [data] queue_monitor thread has finished
[2026-03-15 13:46:54] 2026-03-15 12:46:48,258 | INFO     | [monitor] cgroup control has ended
[2026-03-15 13:46:54] 2026-03-15 12:46:48,995 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139770601375552)>', '<ExcThread(monitor, started 139769979860736)>']
[2026-03-15 13:46:54] 2026-03-15 12:46:49,106 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-15 13:46:54] 2026-03-15 12:46:49,106 | INFO     | [monitor] control thread has ended
[2026-03-15 13:46:54] 2026-03-15 12:46:54,021 | INFO     | all workflow threads have been joined
[2026-03-15 13:46:54] 2026-03-15 12:46:54,021 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-15 13:46:54] 2026-03-15 12:46:54,022 | INFO     | traces error code: 0
[2026-03-15 13:46:54] 2026-03-15 12:46:54,022 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-15 13:46:54] 2026-03-15 12:46:54,073 [wrapper] ==== pilot stdout END ====
[2026-03-15 13:46:54] 2026-03-15 12:46:54,076 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-15 13:46:54] 2026-03-15 12:46:54,079 [wrapper] pilotpid: 2790831
[2026-03-15 13:46:54] 2026-03-15 12:46:54,081 [wrapper] Pilot exit status: 0
[2026-03-15 13:46:54] 2026-03-15 12:46:54,089 [wrapper] pandaids: 7047612085
[2026-03-15 13:46:54] 2026-03-15 12:46:54,107 [wrapper] cleanup supervisor_pilot 2800438 2790832
[2026-03-15 13:46:54] 2026-03-15 12:46:54,110 [wrapper] Test setup, not cleaning
[2026-03-15 13:46:54] 2026-03-15 12:46:54,112 [wrapper] apfmon messages muted
[2026-03-15 13:46:54] 2026-03-15 12:46:54,115 [wrapper] ==== wrapper stdout END ====
[2026-03-15 13:46:54] 2026-03-15 12:46:54,117 [wrapper] ==== wrapper stderr END ====
[2026-03-15 13:46:54]  *** Error codes and diagnostics ***
[2026-03-15 13:46:54]     "exeErrorCode": 0,
[2026-03-15 13:46:54]     "exeErrorDiag": "",
[2026-03-15 13:46:54]     "pilotErrorCode": 0,
[2026-03-15 13:46:54]     "pilotErrorDiag": "",
[2026-03-15 13:46:54]  *** Listing of results directory ***
[2026-03-15 13:46:54] total 618028
[2026-03-15 13:46:54] -rw-r--r-- 1 boinc boinc    585013 Mar 14 20:45 pilot3.tar.gz
[2026-03-15 13:46:54] -rwx------ 1 boinc boinc     36322 Mar 14 20:47 runpilot2-wrapper.sh
[2026-03-15 13:46:54] -rw-r--r-- 1 boinc boinc      5111 Mar 14 20:52 queuedata.json
[2026-03-15 13:46:54] -rw-r--r-- 1 boinc boinc       100 Mar 15 12:25 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-15 13:46:54] -rwxr-xr-x 1 boinc boinc      7986 Mar 15 12:25 run_atlas
[2026-03-15 13:46:54] -rw-r--r-- 1 boinc boinc       105 Mar 15 12:25 job.xml
[2026-03-15 13:46:54] -rw-r--r-- 2 boinc boinc 440150614 Mar 15 12:25 EVNT.46701403._002036.pool.root.1
[2026-03-15 13:46:54] -rw-r--r-- 2 boinc boinc    597520 Mar 15 12:25 input.tar.gz
[2026-03-15 13:46:54] -rw-r--r-- 2 boinc boinc     15845 Mar 15 12:25 start_atlas.sh
[2026-03-15 13:46:54] drwxrwx--x 2 boinc boinc      4096 Mar 15 12:25 shared
[2026-03-15 13:46:54] -rw-r--r-- 1 boinc boinc         0 Mar 15 12:25 boinc_setup_complete
[2026-03-15 13:46:54] -rw-r--r-- 1 boinc boinc      6445 Mar 15 12:25 init_data.xml
[2026-03-15 13:46:54] -rw-r--r-- 1 boinc boinc         0 Mar 15 12:25 boinc_lockfile
[2026-03-15 13:46:54] -rw-r--r-- 1 boinc boinc      2564 Mar 15 12:25 pandaJob.out
[2026-03-15 13:46:54] -rw------- 1 boinc boinc   1006481 Mar 15 12:25 agis_schedconf.cvmfs.json
[2026-03-15 13:46:54] -rw------- 1 boinc boinc   1511579 Mar 15 12:25 agis_ddmendpoints.agis.ALL.json
[2026-03-15 13:46:54] -rw------- 1 boinc boinc       423 Mar 15 12:25 workernode_map.json
[2026-03-15 13:46:54] drwx------ 5 boinc boinc      4096 Mar 15 12:25 pilot3
[2026-03-15 13:46:54] -rw------- 1 boinc boinc        95 Mar 15 13:45 pilot_heartbeat.json
[2026-03-15 13:46:54] -rw------- 1 boinc boinc 186860234 Mar 15 13:45 HITS.48955010._050382.pool.root.1
[2026-03-15 13:46:54] -rw-r--r-- 1 boinc boinc       530 Mar 15 13:45 boinc_task_state.xml
[2026-03-15 13:46:54] -rw------- 1 boinc boinc      1013 Mar 15 13:45 memory_monitor_summary.json
[2026-03-15 13:46:54] -rw------- 1 boinc boinc    258030 Mar 15 13:45 log.48955010._050382.job.log.tgz.1
[2026-03-15 13:46:54] -rw------- 1 boinc boinc      6301 Mar 15 13:45 heartbeat.json
[2026-03-15 13:46:54] -rw-r--r-- 1 boinc boinc      8192 Mar 15 13:46 boinc_mmap_file
[2026-03-15 13:46:54] -rw-r--r-- 1 boinc boinc        27 Mar 15 13:46 wrapper_checkpoint.txt
[2026-03-15 13:46:54] -rw------- 1 boinc boinc      4552 Mar 15 13:46 pilotlog.txt
[2026-03-15 13:46:54] -rw------- 1 boinc boinc    708090 Mar 15 13:46 log.48955010._050382.job.log.1
[2026-03-15 13:46:54] -rw------- 1 boinc boinc       357 Mar 15 13:46 output.list
[2026-03-15 13:46:54] -rw-r--r-- 1 boinc boinc       620 Mar 15 13:46 runtime_log
[2026-03-15 13:46:54] -rw------- 1 boinc boinc    983040 Mar 15 13:46 result.tar.gz
[2026-03-15 13:46:54] -rw-r--r-- 1 boinc boinc      8896 Mar 15 13:46 runtime_log.err
[2026-03-15 13:46:54] -rw------- 1 boinc boinc       657 Mar 15 13:46 OyALDm37jL9n9Rq4apOajLDm4fhM0noT9bVooX4SDmOlrLDmv9LVqm.diag
[2026-03-15 13:46:54] -rw-r--r-- 1 boinc boinc      6492 Mar 15 13:46 stderr.txt
[2026-03-15 13:46:54] HITS file was successfully produced:
[2026-03-15 13:46:54] -rw------- 1 boinc boinc 186860234 Mar 15 13:45 shared/HITS.pool.root.1
[2026-03-15 13:46:54]  *** Contents of shared directory: ***
[2026-03-15 13:46:54] total 613888
[2026-03-15 13:46:54] -rw-r--r-- 2 boinc boinc 440150614 Mar 15 12:25 ATLAS.root_0
[2026-03-15 13:46:54] -rw-r--r-- 2 boinc boinc    597520 Mar 15 12:25 input.tar.gz
[2026-03-15 13:46:54] -rw-r--r-- 2 boinc boinc     15845 Mar 15 12:25 start_atlas.sh
[2026-03-15 13:46:54] -rw------- 1 boinc boinc 186860234 Mar 15 13:45 HITS.pool.root.1
[2026-03-15 13:46:54] -rw------- 1 boinc boinc    983040 Mar 15 13:46 result.tar.gz
13:46:55 (2786782): run_atlas exited; CPU time 13520.838933
13:46:55 (2786782): called boinc_finish(0)

</stderr_txt>
]]>

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