Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
21:48:30 (21700): wrapper (7.7.26015): starting
21:48:30 (21700): wrapper: running run_atlas (--nthreads 12)
[2026-03-14 21:48:30] Arguments: --nthreads 12
[2026-03-14 21:48:30] Threads: 12
[2026-03-14 21:48:30] Checking for CVMFS
[2026-03-14 21:48:31] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-14 21:48:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-14 21:48:31] Running cvmfs_config stat atlas.cern.ch
[2026-03-14 21:48:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-14 21:48:31] 2.11.2.0 10903 162466 97964 157297 2 50 20254579 20275201 1 130560 0 67285162 99.915 9719972 30156 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-14 21:48:31] CVMFS is ok
[2026-03-14 21:48:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-14 21:48:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-14 21:48:31] Further information can be found at the LHC@home message board.
[2026-03-14 21:48:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-14 21:48:31] Checking for apptainer binary...
[2026-03-14 21:48:31] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-14 21:48:31] Running /usr/bin/apptainer --version
[2026-03-14 21:48:31] apptainer version 1.3.2-1.el7
[2026-03-14 21:48:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-14 21:48:33] c-205-22.aglt2.org
[2026-03-14 21:48:33] apptainer works
[2026-03-14 21:48:33] Set ATHENA_PROC_NUMBER=12
[2026-03-14 21:48:33] Set ATHENA_CORE_NUMBER=12
[2026-03-14 21:48:33] Starting ATLAS job with PandaID=7055221359
[2026-03-14 21:48:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-14 23:07:07]  *** The last 200 lines of the pilot log: ***
[2026-03-14 23:07:07]  filetype=log
[2026-03-14 23:07:07]  guid=3bfa9d18-39ba-4702-804c-5363092648ee
[2026-03-14 23:07:07]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-14 23:07:07]  is_altstaged=None
[2026-03-14 23:07:07]  is_tar=False
[2026-03-14 23:07:07]  lfn=log.48843807._000079.job.log.tgz.1
[2026-03-14 23:07:07]  mtime=0
[2026-03-14 23:07:07]  protocol_id=None
[2026-03-14 23:07:07]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-14 23:07:07]  replicas=None
[2026-03-14 23:07:07]  scope=mc23_13p6TeV
[2026-03-14 23:07:07]  status=None
[2026-03-14 23:07:07]  status_code=0
[2026-03-14 23:07:07]  storage_token=
[2026-03-14 23:07:07]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-7055221359/log.48843807._000079.job.log.tgz.1
[2026-03-14 23:07:07]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/53/16/log.48843807._000079.job.log.tgz.1
[2026-03-14 23:07:07]  workdir=None
[2026-03-14 23:07:07] ]
[2026-03-14 23:07:07] 2026-03-15 03:06:20,432 | INFO     | transferring file log.48843807._000079.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-7055221359/log.48843807._000079.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-03-14 23:07:07] 2026-03-15 03:06:20,432 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-7055221359/log.48843807._000079.job.log.tgz.1 /tmp/boinchome/slots/0/log.48843807._000079.job
[2026-03-14 23:07:07] 2026-03-15 03:06:20,454 | INFO     | adding to output.list: log.48843807._000079.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/53/16/log.48843807._000079.job.log.tg
[2026-03-14 23:07:07] 2026-03-15 03:06:20,455 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-14 23:07:07] 2026-03-15 03:06:20,455 | INFO     | summary of transferred files:
[2026-03-14 23:07:07] 2026-03-15 03:06:20,455 | INFO     |  -- lfn=log.48843807._000079.job.log.tgz.1, status_code=0, status=transferred
[2026-03-14 23:07:07] 2026-03-15 03:06:20,455 | INFO     | stage-out finished correctly
[2026-03-14 23:07:07] 2026-03-15 03:06:20,767 | INFO     | time since job start (4647s) is within the limit (345600.0s)
[2026-03-14 23:07:07] 2026-03-15 03:06:21,149 | INFO     | monitor loop #353: job 0:7055221359 is in state 'finished'
[2026-03-14 23:07:07] 2026-03-15 03:06:21,149 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-14 23:07:07] 2026-03-15 03:06:21,227 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-14 23:07:07] 2026-03-15 03:06:21,306 | INFO     | job 7055221359 has state=finished
[2026-03-14 23:07:07] 2026-03-15 03:06:21,306 | INFO     | preparing for final server update for job 7055221359 in state='finished'
[2026-03-14 23:07:07] 2026-03-15 03:06:21,306 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-7055221359/jobReport.json
[2026-03-14 23:07:07] 2026-03-15 03:06:21,309 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-03-14 23:07:07] 2026-03-15 03:06:21,310 | INFO     | this job has now completed (state=finished)
[2026-03-14 23:07:07] 2026-03-15 03:06:21,310 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-14 23:07:07] 2026-03-15 03:06:21,310 | INFO     | log transfer has been attempted: DONE
[2026-03-14 23:07:07] 2026-03-15 03:06:21,310 | INFO     | job 7055221359 has finished - writing final server update
[2026-03-14 23:07:07] 2026-03-15 03:06:21,311 | INFO     | total number of processed events: 400 (read)
[2026-03-14 23:07:07] 2026-03-15 03:06:21,313 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7055221359/memory_monitor_summary.json (trf name=prmon)
[2026-03-14 23:07:07] 2026-03-15 03:06:21,314 | INFO     | extracted standard info from prmon json
[2026-03-14 23:07:07] 2026-03-15 03:06:21,314 | INFO     | extracted standard memory fields from prmon json
[2026-03-14 23:07:07] 2026-03-15 03:06:21,314 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-14 23:07:07] 2026-03-15 03:06:21,315 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-14 23:07:07] 2026-03-15 03:06:21,315 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-14 23:07:07] 2026-03-15 03:06:21,317 | INFO     | fitting pss+swap vs Time
[2026-03-14 23:07:07] 2026-03-15 03:06:21,317 | INFO     | sum of square deviations: 101843770.0
[2026-03-14 23:07:07] 2026-03-15 03:06:21,317 | INFO     | sum of deviations: -5068078616.000001
[2026-03-14 23:07:07] 2026-03-15 03:06:21,318 | INFO     | mean x: 1773541736.0
[2026-03-14 23:07:07] 2026-03-15 03:06:21,318 | INFO     | mean y: 2736719.6666666665
[2026-03-14 23:07:07] 2026-03-15 03:06:21,318 | INFO     | intersect: 88259965873.74373
[2026-03-14 23:07:07] 2026-03-15 03:06:21,318 | INFO     | chi2: 0.10743346471593618
[2026-03-14 23:07:07] 2026-03-15 03:06:21,318 | INFO     | current memory leak: -49.76 B/s (using 69 data points, chi2=0.11)
[2026-03-14 23:07:07] 2026-03-15 03:06:21,318 | INFO     | could have reported an average CPU frequency of 1729 MHz (6 samples)
[2026-03-14 23:07:07] 2026-03-15 03:06:21,319 | INFO     | ..............................
[2026-03-14 23:07:07] 2026-03-15 03:06:21,319 | INFO     | . Timing measurements:
[2026-03-14 23:07:07] 2026-03-15 03:06:21,319 | INFO     | . get job = 0 s
[2026-03-14 23:07:07] 2026-03-15 03:06:21,319 | INFO     | . initial setup = 7 s
[2026-03-14 23:07:07] 2026-03-15 03:06:21,319 | INFO     | . payload setup = 7 s
[2026-03-14 23:07:07] 2026-03-15 03:06:21,319 | INFO     | . stage-in = 0 s
[2026-03-14 23:07:07] 2026-03-15 03:06:21,319 | INFO     | . payload execution = 4622 s
[2026-03-14 23:07:07] 2026-03-15 03:06:21,319 | INFO     | . stage-out = 0 s
[2026-03-14 23:07:07] 2026-03-15 03:06:21,319 | INFO     | . log creation = 0 s
[2026-03-14 23:07:07] 2026-03-15 03:06:21,320 | INFO     | ..............................
[2026-03-14 23:07:07] 2026-03-15 03:06:21,761 | INFO     | 
[2026-03-14 23:07:07] 2026-03-15 03:06:21,762 | INFO     | job summary report
[2026-03-14 23:07:07] 2026-03-15 03:06:21,762 | INFO     | --------------------------------------------------
[2026-03-14 23:07:07] 2026-03-15 03:06:21,762 | INFO     | PanDA job id: 7055221359
[2026-03-14 23:07:07] 2026-03-15 03:06:21,762 | INFO     | task id: 48843807
[2026-03-14 23:07:07] 2026-03-15 03:06:21,762 | INFO     | errors: (none)
[2026-03-14 23:07:07] 2026-03-15 03:06:21,763 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-14 23:07:07] 2026-03-15 03:06:21,763 | INFO     | pilot state: finished 
[2026-03-14 23:07:07] 2026-03-15 03:06:21,763 | INFO     | transexitcode: 0
[2026-03-14 23:07:07] 2026-03-15 03:06:21,763 | INFO     | exeerrorcode: 0
[2026-03-14 23:07:07] 2026-03-15 03:06:21,763 | INFO     | exeerrordiag: 
[2026-03-14 23:07:07] 2026-03-15 03:06:21,763 | INFO     | exitcode: 0
[2026-03-14 23:07:07] 2026-03-15 03:06:21,764 | INFO     | exitmsg: OK
[2026-03-14 23:07:07] 2026-03-15 03:06:21,764 | INFO     | cpuconsumptiontime: 49581 s
[2026-03-14 23:07:07] 2026-03-15 03:06:21,764 | INFO     | nevents: 400
[2026-03-14 23:07:07] 2026-03-15 03:06:21,764 | INFO     | neventsw: 0
[2026-03-14 23:07:07] 2026-03-15 03:06:21,764 | INFO     | pid: 30101
[2026-03-14 23:07:07] 2026-03-15 03:06:21,764 | INFO     | pgrp: 30101
[2026-03-14 23:07:07] 2026-03-15 03:06:21,764 | INFO     | corecount: 12
[2026-03-14 23:07:07] 2026-03-15 03:06:21,765 | INFO     | event service: False
[2026-03-14 23:07:07] 2026-03-15 03:06:21,765 | INFO     | sizes: {0: 2279878, 1: 2280339, 11: 2280339, 4634: 2306505, 4636: 2315697}
[2026-03-14 23:07:07] 2026-03-15 03:06:21,765 | INFO     | --------------------------------------------------
[2026-03-14 23:07:07] 2026-03-15 03:06:21,765 | INFO     | 
[2026-03-14 23:07:07] 2026-03-15 03:06:21,765 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-03-14 23:07:07] 2026-03-15 03:06:21,787 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-14 23:07:07] 2026-03-15 03:06:21,788 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-14 23:07:07] 2026-03-15 03:06:21,788 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-14 23:07:07] 2026-03-15 03:06:21,788 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-14 23:07:07] 2026-03-15 03:06:21,788 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-14 23:07:07] 2026-03-15 03:06:21,788 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-14 23:07:07] 2026-03-15 03:06:21,788 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-14 23:07:07] 2026-03-15 03:06:21,789 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-14 23:07:07] 2026-03-15 03:06:21,789 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-14 23:07:07] 2026-03-15 03:06:21,789 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-14 23:07:07] 2026-03-15 03:06:21,789 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-14 23:07:07] 2026-03-15 03:06:21,789 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-14 23:07:07] 2026-03-15 03:06:21,789 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-14 23:07:07] 2026-03-15 03:06:21,790 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-14 23:07:07] 2026-03-15 03:06:21,790 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-14 23:07:07] 2026-03-15 03:06:21,790 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-14 23:07:07] 2026-03-15 03:06:21,790 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-14 23:07:07] 2026-03-15 03:06:21,790 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-14 23:07:07] 2026-03-15 03:06:21,791 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-14 23:07:07] 2026-03-15 03:06:21,791 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-14 23:07:07] 2026-03-15 03:06:21,791 | INFO     | job 7055221359 has completed (purged errors)
[2026-03-14 23:07:07] 2026-03-15 03:06:21,791 | INFO     | overall cleanup function is called
[2026-03-14 23:07:07] 2026-03-15 03:06:22,796 | INFO     | --- collectZombieJob: --- 10, [30101]
[2026-03-14 23:07:07] 2026-03-15 03:06:22,796 | INFO     | zombie collector waiting for pid 30101
[2026-03-14 23:07:07] 2026-03-15 03:06:22,796 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-14 23:07:07] 2026-03-15 03:06:22,796 | INFO     | collected zombie processes
[2026-03-14 23:07:07] 2026-03-15 03:06:22,796 | INFO     | will attempt to kill all subprocesses of pid=30101
[2026-03-14 23:07:07] 2026-03-15 03:06:22,888 | INFO     | process IDs to be killed: [30101] (in reverse order)
[2026-03-14 23:07:07] 2026-03-15 03:06:22,941 | WARNING  | found no corresponding commands to process id(s)
[2026-03-14 23:07:07] 2026-03-15 03:06:22,942 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-14 23:07:07] 2026-03-15 03:06:22,945 | INFO     | did not find any defunct processes belonging to 30101
[2026-03-14 23:07:07] 2026-03-15 03:06:22,948 | INFO     | did not find any defunct processes belonging to 30101
[2026-03-14 23:07:07] 2026-03-15 03:06:22,948 | INFO     | ready for new job
[2026-03-14 23:07:07] 2026-03-15 03:06:22,949 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-14 23:07:07] 2026-03-15 03:06:22,950 | INFO     | **************************************
[2026-03-14 23:07:07] 2026-03-15 03:06:22,950 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-14 23:07:07] 2026-03-15 03:06:22,950 | INFO     | **************************************
[2026-03-14 23:07:07] 2026-03-15 03:06:22,950 | INFO     | 
[2026-03-14 23:07:07] 2026-03-15 03:06:22,951 | INFO     | architecture information:
[2026-03-14 23:07:07] 2026-03-15 03:06:22,951 | INFO     | executing command: cat /etc/os-release
[2026-03-14 23:07:07] 2026-03-15 03:06:22,966 | INFO     | cat /etc/os-release:
[2026-03-14 23:07:07] NAME="CentOS Linux"
[2026-03-14 23:07:07] VERSION="7 (Core)"
[2026-03-14 23:07:07] ID="centos"
[2026-03-14 23:07:07] ID_LIKE="rhel fedora"
[2026-03-14 23:07:07] VERSION_ID="7"
[2026-03-14 23:07:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-14 23:07:07] ANSI_COLOR="0;31"
[2026-03-14 23:07:07] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-14 23:07:07] HOME_URL="https://www.centos.org/"
[2026-03-14 23:07:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-14 23:07:07] 
[2026-03-14 23:07:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-14 23:07:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-14 23:07:07] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-14 23:07:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-14 23:07:07] 
[2026-03-14 23:07:07] 2026-03-15 03:06:22,966 | INFO     | **************************************
[2026-03-14 23:07:07] 2026-03-15 03:06:23,469 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-03-14 23:07:07] 2026-03-15 03:06:23,488 | INFO     | sufficient remaining disk space (29343350784 B)
[2026-03-14 23:07:07] 2026-03-15 03:06:23,488 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-14 23:07:07] 2026-03-15 03:06:23,489 | INFO     | current server update state: UPDATING_FINAL
[2026-03-14 23:07:07] 2026-03-15 03:06:23,489 | INFO     | update_server=False
[2026-03-14 23:07:07] 2026-03-15 03:06:23,489 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-14 23:07:07] 2026-03-15 03:06:23,489 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-14 23:07:07] 2026-03-15 03:06:23,542 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-14 23:07:07] 2026-03-15 03:06:23,652 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-14 23:07:07] 2026-03-15 03:06:23,652 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-14 23:07:07] 2026-03-15 03:06:23,652 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-14 23:07:07] 2026-03-15 03:06:23,653 | INFO     | will abort loop
[2026-03-14 23:07:07] 2026-03-15 03:06:23,915 | INFO     | all data control threads have been joined
[2026-03-14 23:07:07] 2026-03-15 03:06:24,490 | INFO     | [job] retrieve thread has finished
[2026-03-14 23:07:07] 2026-03-15 03:06:24,511 | INFO     | all payload control threads have been joined
[2026-03-14 23:07:07] 2026-03-15 03:06:24,634 | INFO     | job.realtimelogging is not enabled
[2026-03-14 23:07:07] 2026-03-15 03:06:24,658 | INFO     | [job] job monitor thread has finished
[2026-03-14 23:07:07] 2026-03-15 03:06:24,670 | INFO     | [job] create_data_payload thread has finished
[2026-03-14 23:07:07] 2026-03-15 03:06:24,685 | INFO     | [payload] validate_pre thread has finished
[2026-03-14 23:07:07] 2026-03-15 03:06:24,776 | INFO     | [payload] validate_post thread has finished
[2026-03-14 23:07:07] 2026-03-15 03:06:24,921 | INFO     | [data] control thread has finished
[2026-03-14 23:07:07] 2026-03-15 03:06:25,004 | INFO     | all job control threads have been joined
[2026-03-14 23:07:07] 2026-03-15 03:06:25,097 | INFO     | [data] copytool_in thread has finished
[2026-03-14 23:07:07] 2026-03-15 03:06:25,517 | INFO     | [payload] control thread has finished
[2026-03-14 23:07:07] 2026-03-15 03:06:25,548 | INFO     | [data] copytool_out thread has finished
[2026-03-14 23:07:07] 2026-03-15 03:06:25,590 | INFO     | [payload] execute_payloads thread has finished
[2026-03-14 23:07:07] 2026-03-15 03:06:25,640 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-14 23:07:07] 2026-03-15 03:06:25,812 | INFO     | [payload] failed_post thread has finished
[2026-03-14 23:07:07] 2026-03-15 03:06:25,921 | INFO     | [job] validate thread has finished
[2026-03-14 23:07:07] 2026-03-15 03:06:26,009 | INFO     | [job] control thread has finished
[2026-03-14 23:07:07] 2026-03-15 03:06:26,409 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-14 23:07:07] 2026-03-15 03:06:27,414 | INFO     | [job] queue monitor thread has finished
[2026-03-14 23:07:07] 2026-03-15 03:06:27,496 | INFO     | [data] queue_monitor thread has finished
[2026-03-14 23:07:07] 2026-03-15 03:06:53,960 | INFO     | PID=25678 has CPU usage=3.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-14 23:07:07] 2026-03-15 03:06:53,961 | INFO     | found 0 job(s) in 20 queues
[2026-03-14 23:07:07] 2026-03-15 03:06:53,961 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-14 23:07:07] 2026-03-15 03:06:53,961 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-14 23:07:07] 2026-03-15 03:07:00,756 | INFO     | [monitor] cgroup control has ended
[2026-03-14 23:07:07] 2026-03-15 03:07:02,327 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139897683048256)>', '<ExcThread(monitor, started 139896278742784)>']
[2026-03-14 23:07:07] 2026-03-15 03:07:02,993 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-14 23:07:07] 2026-03-15 03:07:02,993 | INFO     | [monitor] control thread has ended
[2026-03-14 23:07:07] 2026-03-15 03:07:07,340 | INFO     | all workflow threads have been joined
[2026-03-14 23:07:07] 2026-03-15 03:07:07,340 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-14 23:07:07] 2026-03-15 03:07:07,341 | INFO     | traces error code: 0
[2026-03-14 23:07:07] 2026-03-15 03:07:07,341 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-14 23:07:07] 2026-03-15 03:07:07,428 [wrapper] ==== pilot stdout END ====
[2026-03-14 23:07:07] 2026-03-15 03:07:07,432 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-14 23:07:07] 2026-03-15 03:07:07,435 [wrapper] pilotpid: 25678
[2026-03-14 23:07:07] 2026-03-15 03:07:07,439 [wrapper] Pilot exit status: 0
[2026-03-14 23:07:07] 2026-03-15 03:07:07,454 [wrapper] pandaids: 7055221359
[2026-03-14 23:07:07] 2026-03-15 03:07:07,492 [wrapper] cleanup supervisor_pilot 19674 25679
[2026-03-14 23:07:07] 2026-03-15 03:07:07,496 [wrapper] Test setup, not cleaning
[2026-03-14 23:07:07] 2026-03-15 03:07:07,500 [wrapper] apfmon messages muted
[2026-03-14 23:07:07] 2026-03-15 03:07:07,504 [wrapper] ==== wrapper stdout END ====
[2026-03-14 23:07:07] 2026-03-15 03:07:07,508 [wrapper] ==== wrapper stderr END ====
[2026-03-14 23:07:07]  *** Error codes and diagnostics ***
[2026-03-14 23:07:07]     "exeErrorCode": 0,
[2026-03-14 23:07:07]     "exeErrorDiag": "",
[2026-03-14 23:07:07]     "pilotErrorCode": 0,
[2026-03-14 23:07:07]     "pilotErrorDiag": "",
[2026-03-14 23:07:07]  *** Listing of results directory ***
[2026-03-14 23:07:07] total 388856
[2026-03-14 23:07:07] -rw-r--r-- 1 boincer umatlas      5111 Mar 14 17:44 queuedata.json
[2026-03-14 23:07:07] -rw-r--r-- 1 boincer umatlas    585013 Mar 14 17:44 pilot3.tar.gz
[2026-03-14 23:07:07] -rwx------ 1 boincer umatlas     36322 Mar 14 17:45 runpilot2-wrapper.sh
[2026-03-14 23:07:07] -rw-r--r-- 1 boincer umatlas       100 Mar 14 21:48 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-14 23:07:07] -rwxr-xr-x 1 boincer umatlas      7986 Mar 14 21:48 run_atlas
[2026-03-14 23:07:07] -rw-r--r-- 1 boincer umatlas       105 Mar 14 21:48 job.xml
[2026-03-14 23:07:07] -rw-r--r-- 2 boincer umatlas 231828624 Mar 14 21:48 EVNT.48451837._000002.pool.root.1
[2026-03-14 23:07:07] -rw-r--r-- 2 boincer umatlas     15845 Mar 14 21:48 start_atlas.sh
[2026-03-14 23:07:07] drwxrwx--x 2 boincer umatlas      4096 Mar 14 21:48 shared
[2026-03-14 23:07:07] -rw-r--r-- 2 boincer umatlas    597568 Mar 14 21:48 input.tar.gz
[2026-03-14 23:07:07] -rw-r--r-- 1 boincer umatlas         0 Mar 14 21:48 boinc_lockfile
[2026-03-14 23:07:07] -rw-r--r-- 1 boincer umatlas      2674 Mar 14 21:48 pandaJob.out
[2026-03-14 23:07:07] -rw------- 1 boincer umatlas        57 Mar 14 21:48 setup.sh.local
[2026-03-14 23:07:07] -rw------- 1 boincer umatlas   1006481 Mar 14 21:48 agis_schedconf.cvmfs.json
[2026-03-14 23:07:07] -rw------- 1 boincer umatlas   1511579 Mar 14 21:48 agis_ddmendpoints.agis.ALL.json
[2026-03-14 23:07:07] -rw------- 1 boincer umatlas       445 Mar 14 21:48 workernode_map.json
[2026-03-14 23:07:07] drwx------ 5 boincer umatlas      4096 Mar 14 21:48 pilot3
[2026-03-14 23:07:07] -rw-r--r-- 1 boincer umatlas      5953 Mar 14 23:02 init_data.xml
[2026-03-14 23:07:07] -rw------- 1 boincer umatlas 160302386 Mar 14 23:05 HITS.48843807._000079.pool.root.1
[2026-03-14 23:07:07] -rw-r--r-- 1 boincer umatlas       529 Mar 14 23:05 boinc_task_state.xml
[2026-03-14 23:07:07] -rw------- 1 boincer umatlas      1044 Mar 14 23:06 memory_monitor_summary.json
[2026-03-14 23:07:07] -rw------- 1 boincer umatlas    382724 Mar 14 23:06 log.48843807._000079.job.log.tgz.1
[2026-03-14 23:07:07] -rw------- 1 boincer umatlas      6412 Mar 14 23:06 heartbeat.json
[2026-03-14 23:07:07] -rw------- 1 boincer umatlas        95 Mar 14 23:06 pilot_heartbeat.json
[2026-03-14 23:07:07] -rw-r--r-- 1 boincer umatlas      8192 Mar 14 23:07 boinc_mmap_file
[2026-03-14 23:07:07] -rw-r--r-- 1 boincer umatlas        27 Mar 14 23:07 wrapper_checkpoint.txt
[2026-03-14 23:07:07] -rw------- 1 boincer umatlas      5000 Mar 14 23:07 pilotlog.txt
[2026-03-14 23:07:07] -rw------- 1 boincer umatlas    675508 Mar 14 23:07 log.48843807._000079.job.log.1
[2026-03-14 23:07:07] -rw------- 1 boincer umatlas       357 Mar 14 23:07 output.list
[2026-03-14 23:07:07] -rw-r--r-- 1 boincer umatlas       620 Mar 14 23:07 runtime_log
[2026-03-14 23:07:07] -rw------- 1 boincer umatlas   1075200 Mar 14 23:07 result.tar.gz
[2026-03-14 23:07:07] -rw------- 1 boincer umatlas       659 Mar 14 23:07 fHnNDmNylL9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmdZuLDmTtw9Tn.diag
[2026-03-14 23:07:07] -rw-r--r-- 1 boincer umatlas      9343 Mar 14 23:07 runtime_log.err
[2026-03-14 23:07:07] -rw-r--r-- 1 boincer umatlas     21239 Mar 14 23:07 stderr.txt
[2026-03-14 23:07:07] HITS file was successfully produced:
[2026-03-14 23:07:07] -rw------- 1 boincer umatlas 160302386 Mar 14 23:05 shared/HITS.pool.root.1
[2026-03-14 23:07:07]  *** Contents of shared directory: ***
[2026-03-14 23:07:07] total 384604
[2026-03-14 23:07:07] -rw-r--r-- 2 boincer umatlas 231828624 Mar 14 21:48 ATLAS.root_0
[2026-03-14 23:07:07] -rw-r--r-- 2 boincer umatlas     15845 Mar 14 21:48 start_atlas.sh
[2026-03-14 23:07:07] -rw-r--r-- 2 boincer umatlas    597568 Mar 14 21:48 input.tar.gz
[2026-03-14 23:07:07] -rw------- 1 boincer umatlas 160302386 Mar 14 23:05 HITS.pool.root.1
[2026-03-14 23:07:07] -rw------- 1 boincer umatlas   1075200 Mar 14 23:07 result.tar.gz
23:07:09 (21700): run_atlas exited; CPU time 49560.143205
23:07:09 (21700): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN