Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:15:27 (855): wrapper (7.7.26015): starting
09:15:27 (855): wrapper: running run_atlas (--nthreads 8)
[2026-03-15 09:15:27] Arguments: --nthreads 8
[2026-03-15 09:15:27] Threads: 8
[2026-03-15 09:15:27] Checking for CVMFS
[2026-03-15 09:15:27] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-15 09:15:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-15 09:15:29] Running cvmfs_config stat atlas.cern.ch
[2026-03-15 09:15:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-15 09:15:31] 2.11.2.0 7648 128744 137760 157306 0 54 24103958 25165824 4726 130560 157 43008982 99.844 26171850 887 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-03-15 09:15:31] CVMFS is ok
[2026-03-15 09:15:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-15 09:15:31] Checking for apptainer binary...
[2026-03-15 09:15:31] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-15 09:15:31] Running /usr/bin/apptainer --version
[2026-03-15 09:15:31] apptainer version 1.3.2-1.el7
[2026-03-15 09:15:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-15 09:15:50] cg-vwn480.simple-grid.lan
[2026-03-15 09:15:50] apptainer works
[2026-03-15 09:15:50] Set ATHENA_PROC_NUMBER=8
[2026-03-15 09:15:50] Set ATHENA_CORE_NUMBER=8
[2026-03-15 09:15:50] Starting ATLAS job with PandaID=7049490221
[2026-03-15 09:15:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/10 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-15 12:50:12]  *** The last 200 lines of the pilot log: ***
[2026-03-15 12:50:12] 2026-03-15 11:49:35,675 | INFO     | total number of processed events: 400 (read)
[2026-03-15 12:50:12] 2026-03-15 11:49:35,677 | INFO     | using path: /var/lib/boinc/slots/10/PanDA_Pilot-7049490221/memory_monitor_summary.json (trf name=prmon)
[2026-03-15 12:50:12] 2026-03-15 11:49:35,678 | INFO     | extracted standard info from prmon json
[2026-03-15 12:50:12] 2026-03-15 11:49:35,678 | INFO     | extracted standard memory fields from prmon json
[2026-03-15 12:50:12] 2026-03-15 11:49:35,678 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-15 12:50:12] 2026-03-15 11:49:35,678 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-15 12:50:12] 2026-03-15 11:49:35,678 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-15 12:50:12] 2026-03-15 11:49:35,682 | INFO     | fitting pss+swap vs Time
[2026-03-15 12:50:12] 2026-03-15 11:49:35,682 | INFO     | sum of square deviations: 2555770710.5
[2026-03-15 12:50:12] 2026-03-15 11:49:35,684 | INFO     | sum of deviations: 41311129491.0
[2026-03-15 12:50:12] 2026-03-15 11:49:35,684 | INFO     | mean x: 1773569213.5
[2026-03-15 12:50:12] 2026-03-15 11:49:35,684 | INFO     | mean y: 2456298.386138614
[2026-03-15 12:50:12] 2026-03-15 11:49:35,685 | INFO     | intersect: -28665274785.289852
[2026-03-15 12:50:12] 2026-03-15 11:49:35,685 | INFO     | chi2: 7.059294726483348
[2026-03-15 12:50:12] 2026-03-15 11:49:35,685 | INFO     | sum of square deviations: 2370641658.0
[2026-03-15 12:50:12] 2026-03-15 11:49:35,687 | INFO     | sum of deviations: 53723470368.99999
[2026-03-15 12:50:12] 2026-03-15 11:49:35,687 | INFO     | mean x: 1773569061.0
[2026-03-15 12:50:12] 2026-03-15 11:49:35,687 | INFO     | mean y: 2466302.4822335024
[2026-03-15 12:50:12] 2026-03-15 11:49:35,687 | INFO     | intersect: -40190147614.71092
[2026-03-15 12:50:12] 2026-03-15 11:49:35,687 | INFO     | chi2: 6.366281810339382
[2026-03-15 12:50:12] 2026-03-15 11:49:35,688 | INFO     | current chi2=6.366281810339382 (change=9.817027663458902 %)
[2026-03-15 12:50:12] 2026-03-15 11:49:35,688 | INFO     | right removable region: 196
[2026-03-15 12:50:12] 2026-03-15 11:49:35,688 | INFO     | sum of square deviations: 2370641658.0
[2026-03-15 12:50:12] 2026-03-15 11:49:35,689 | INFO     | sum of deviations: -28234566445.000004
[2026-03-15 12:50:12] 2026-03-15 11:49:35,690 | INFO     | mean x: 1773569366.0
[2026-03-15 12:50:12] 2026-03-15 11:49:35,690 | INFO     | mean y: 2513530.162436548
[2026-03-15 12:50:12] 2026-03-15 11:49:35,690 | INFO     | intersect: 21125892485.457726
[2026-03-15 12:50:12] 2026-03-15 11:49:35,690 | INFO     | chi2: 2.2263563356878646
[2026-03-15 12:50:12] 2026-03-15 11:49:35,690 | INFO     | current chi2=2.2263563356878646 (change=68.46205716081577 %)
[2026-03-15 12:50:12] 2026-03-15 11:49:35,691 | INFO     | sum of square deviations: 2194675568.0
[2026-03-15 12:50:12] 2026-03-15 11:49:35,695 | INFO     | sum of deviations: -58382874757.500015
[2026-03-15 12:50:12] 2026-03-15 11:49:35,696 | INFO     | mean x: 1773569518.5
[2026-03-15 12:50:12] 2026-03-15 11:49:35,696 | INFO     | mean y: 2539424.6822916665
[2026-03-15 12:50:12] 2026-03-15 11:49:35,696 | INFO     | intersect: 47183128930.52268
[2026-03-15 12:50:12] 2026-03-15 11:49:35,696 | INFO     | chi2: 0.9951190137459516
[2026-03-15 12:50:12] 2026-03-15 11:49:35,696 | INFO     | current chi2=0.9951190137459516 (change=55.302796870632335 %)
[2026-03-15 12:50:12] 2026-03-15 11:49:35,697 | INFO     | sum of square deviations: 2027639878.0
[2026-03-15 12:50:12] 2026-03-15 11:49:35,698 | INFO     | sum of deviations: -55053517419.0
[2026-03-15 12:50:12] 2026-03-15 11:49:35,698 | INFO     | mean x: 1773569671.0
[2026-03-15 12:50:12] 2026-03-15 11:49:35,698 | INFO     | mean y: 2536346.935828877
[2026-03-15 12:50:12] 2026-03-15 11:49:35,698 | INFO     | intersect: 48157659865.47643
[2026-03-15 12:50:12] 2026-03-15 11:49:35,699 | INFO     | chi2: 0.9849962049601666
[2026-03-15 12:50:12] 2026-03-15 11:49:35,699 | INFO     | current chi2=0.9849962049601666 (change=1.0172460425290673 %)
[2026-03-15 12:50:12] 2026-03-15 11:49:35,699 | INFO     | left removable region: 30
[2026-03-15 12:50:12] 2026-03-15 11:49:35,699 | INFO     | sum of square deviations: 1418361477.5
[2026-03-15 12:50:12] 2026-03-15 11:49:35,700 | INFO     | sum of deviations: -23526823612.99999
[2026-03-15 12:50:12] 2026-03-15 11:49:35,701 | INFO     | mean x: 1773569945.5
[2026-03-15 12:50:12] 2026-03-15 11:49:35,701 | INFO     | mean y: 2530506.373493976
[2026-03-15 12:50:12] 2026-03-15 11:49:35,701 | INFO     | intersect: 29421312625.754974
[2026-03-15 12:50:12] 2026-03-15 11:49:35,701 | INFO     | chi2: 0.16083359931498137
[2026-03-15 12:50:12] 2026-03-15 11:49:35,701 | INFO     | current memory leak: -16.59 B/s (using 166 data points, chi2=0.16)
[2026-03-15 12:50:12] 2026-03-15 11:49:35,702 | INFO     | could have reported an average CPU frequency of 2249 MHz (10 samples)
[2026-03-15 12:50:12] 2026-03-15 11:49:35,702 | INFO     | ..............................
[2026-03-15 12:50:12] 2026-03-15 11:49:35,702 | INFO     | . Timing measurements:
[2026-03-15 12:50:12] 2026-03-15 11:49:35,702 | INFO     | . get job = 0 s
[2026-03-15 12:50:12] 2026-03-15 11:49:35,702 | INFO     | . initial setup = 101 s
[2026-03-15 12:50:12] 2026-03-15 11:49:35,702 | INFO     | . payload setup = 134 s
[2026-03-15 12:50:12] 2026-03-15 11:49:35,702 | INFO     | . stage-in = 0 s
[2026-03-15 12:50:12] 2026-03-15 11:49:35,702 | INFO     | . payload execution = 12377 s
[2026-03-15 12:50:12] 2026-03-15 11:49:35,703 | INFO     | . stage-out = 3 s
[2026-03-15 12:50:12] 2026-03-15 11:49:35,703 | INFO     | . log creation = 1 s
[2026-03-15 12:50:12] 2026-03-15 11:49:35,703 | INFO     | ..............................
[2026-03-15 12:50:12] 2026-03-15 11:49:35,837 | INFO     | 
[2026-03-15 12:50:12] 2026-03-15 11:49:35,838 | INFO     | job summary report
[2026-03-15 12:50:12] 2026-03-15 11:49:35,838 | INFO     | --------------------------------------------------
[2026-03-15 12:50:12] 2026-03-15 11:49:35,838 | INFO     | PanDA job id: 7049490221
[2026-03-15 12:50:12] 2026-03-15 11:49:35,838 | INFO     | task id: 48955006
[2026-03-15 12:50:12] 2026-03-15 11:49:35,838 | INFO     | errors: (none)
[2026-03-15 12:50:12] 2026-03-15 11:49:35,838 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-15 12:50:12] 2026-03-15 11:49:35,838 | INFO     | pilot state: finished 
[2026-03-15 12:50:12] 2026-03-15 11:49:35,839 | INFO     | transexitcode: 0
[2026-03-15 12:50:12] 2026-03-15 11:49:35,839 | INFO     | exeerrorcode: 0
[2026-03-15 12:50:12] 2026-03-15 11:49:35,839 | INFO     | exeerrordiag: 
[2026-03-15 12:50:12] 2026-03-15 11:49:35,839 | INFO     | exitcode: 0
[2026-03-15 12:50:12] 2026-03-15 11:49:35,839 | INFO     | exitmsg: OK
[2026-03-15 12:50:12] 2026-03-15 11:49:35,839 | INFO     | cpuconsumptiontime: 47583 s
[2026-03-15 12:50:12] 2026-03-15 11:49:35,839 | INFO     | nevents: 400
[2026-03-15 12:50:12] 2026-03-15 11:49:35,839 | INFO     | neventsw: 0
[2026-03-15 12:50:12] 2026-03-15 11:49:35,840 | INFO     | pid: 9450
[2026-03-15 12:50:12] 2026-03-15 11:49:35,840 | INFO     | pgrp: 9450
[2026-03-15 12:50:12] 2026-03-15 11:49:35,840 | INFO     | corecount: 8
[2026-03-15 12:50:12] 2026-03-15 11:49:35,840 | INFO     | event service: False
[2026-03-15 12:50:12] 2026-03-15 11:49:35,840 | INFO     | sizes: {0: 2279693, 1: 2280150, 2: 2280210, 12: 2280238, 12516: 2310024, 12519: 2319024, 12522: 2319208, 12524: 2319402}
[2026-03-15 12:50:12] 2026-03-15 11:49:35,840 | INFO     | --------------------------------------------------
[2026-03-15 12:50:12] 2026-03-15 11:49:35,840 | INFO     | 
[2026-03-15 12:50:12] 2026-03-15 11:49:35,840 | INFO     | executing command: ls -lF /var/lib/boinc/slots/10
[2026-03-15 12:50:12] 2026-03-15 11:49:36,456 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-15 12:50:12] 2026-03-15 11:49:36,456 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-15 12:50:12] 2026-03-15 11:49:36,456 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-15 12:50:12] 2026-03-15 11:49:36,456 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-15 12:50:12] 2026-03-15 11:49:36,457 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-15 12:50:12] 2026-03-15 11:49:36,457 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-15 12:50:12] 2026-03-15 11:49:36,457 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-15 12:50:12] 2026-03-15 11:49:36,457 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-15 12:50:12] 2026-03-15 11:49:36,457 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-15 12:50:12] 2026-03-15 11:49:36,457 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-15 12:50:12] 2026-03-15 11:49:36,457 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-15 12:50:12] 2026-03-15 11:49:36,457 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-15 12:50:12] 2026-03-15 11:49:36,457 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-15 12:50:12] 2026-03-15 11:49:36,457 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-15 12:50:12] 2026-03-15 11:49:36,457 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-15 12:50:12] 2026-03-15 11:49:36,457 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-15 12:50:12] 2026-03-15 11:49:36,458 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-15 12:50:12] 2026-03-15 11:49:36,458 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-15 12:50:12] 2026-03-15 11:49:36,458 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-15 12:50:12] 2026-03-15 11:49:36,458 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-15 12:50:12] 2026-03-15 11:49:36,458 | INFO     | job 7049490221 has completed (purged errors)
[2026-03-15 12:50:12] 2026-03-15 11:49:36,458 | INFO     | overall cleanup function is called
[2026-03-15 12:50:12] 2026-03-15 11:49:37,466 | INFO     | --- collectZombieJob: --- 10, [9450]
[2026-03-15 12:50:12] 2026-03-15 11:49:37,467 | INFO     | zombie collector waiting for pid 9450
[2026-03-15 12:50:12] 2026-03-15 11:49:37,467 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-15 12:50:12] 2026-03-15 11:49:37,467 | INFO     | collected zombie processes
[2026-03-15 12:50:12] 2026-03-15 11:49:37,467 | INFO     | will attempt to kill all subprocesses of pid=9450
[2026-03-15 12:50:12] 2026-03-15 11:49:37,589 | INFO     | process IDs to be killed: [9450] (in reverse order)
[2026-03-15 12:50:12] 2026-03-15 11:49:38,426 | WARNING  | found no corresponding commands to process id(s)
[2026-03-15 12:50:12] 2026-03-15 11:49:38,426 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-15 12:50:12] 2026-03-15 11:49:38,429 | INFO     | did not find any defunct processes belonging to 9450
[2026-03-15 12:50:12] 2026-03-15 11:49:38,432 | INFO     | did not find any defunct processes belonging to 9450
[2026-03-15 12:50:12] 2026-03-15 11:49:38,433 | INFO     | ready for new job
[2026-03-15 12:50:12] 2026-03-15 11:49:38,433 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-15 12:50:12] 2026-03-15 11:49:38,435 | INFO     | **************************************
[2026-03-15 12:50:12] 2026-03-15 11:49:38,435 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-15 12:50:12] 2026-03-15 11:49:38,435 | INFO     | **************************************
[2026-03-15 12:50:12] 2026-03-15 11:49:38,435 | INFO     | 
[2026-03-15 12:50:12] 2026-03-15 11:49:38,436 | INFO     | pilot is running in a VM
[2026-03-15 12:50:12] 2026-03-15 11:49:38,436 | INFO     | architecture information:
[2026-03-15 12:50:12] 2026-03-15 11:49:38,446 | INFO     | executing command: cat /etc/os-release
[2026-03-15 12:50:12] 2026-03-15 11:49:38,823 | INFO     | cat /etc/os-release:
[2026-03-15 12:50:12] NAME="CentOS Linux"
[2026-03-15 12:50:12] VERSION="7 (Core)"
[2026-03-15 12:50:12] ID="centos"
[2026-03-15 12:50:12] ID_LIKE="rhel fedora"
[2026-03-15 12:50:12] VERSION_ID="7"
[2026-03-15 12:50:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-15 12:50:12] ANSI_COLOR="0;31"
[2026-03-15 12:50:12] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-15 12:50:12] HOME_URL="https://www.centos.org/"
[2026-03-15 12:50:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-15 12:50:12] 
[2026-03-15 12:50:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-15 12:50:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-15 12:50:12] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-15 12:50:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-15 12:50:12] 
[2026-03-15 12:50:12] 2026-03-15 11:49:38,823 | INFO     | **************************************
[2026-03-15 12:50:12] 2026-03-15 11:49:39,327 | INFO     | executing command: df -mP /var/lib/boinc/slots/10
[2026-03-15 12:50:12] 2026-03-15 11:49:39,490 | INFO     | sufficient remaining disk space (495290679296 B)
[2026-03-15 12:50:12] 2026-03-15 11:49:39,491 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-15 12:50:12] 2026-03-15 11:49:39,491 | INFO     | current server update state: UPDATING_FINAL
[2026-03-15 12:50:12] 2026-03-15 11:49:39,491 | INFO     | update_server=False
[2026-03-15 12:50:12] 2026-03-15 11:49:39,491 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-15 12:50:12] 2026-03-15 11:49:39,492 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-15 12:50:12] 2026-03-15 11:49:39,497 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-15 12:50:12] 2026-03-15 11:49:39,498 | INFO     | aborting loop
[2026-03-15 12:50:12] 2026-03-15 11:49:39,498 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-15 12:50:12] 2026-03-15 11:49:39,765 | INFO     | all data control threads have been joined
[2026-03-15 12:50:12] 2026-03-15 11:49:40,072 | INFO     | all payload control threads have been joined
[2026-03-15 12:50:12] 2026-03-15 11:49:40,498 | INFO     | [job] retrieve thread has finished
[2026-03-15 12:50:12] 2026-03-15 11:49:40,503 | INFO     | [job] job monitor thread has finished
[2026-03-15 12:50:12] 2026-03-15 11:49:40,510 | INFO     | [payload] validate_pre thread has finished
[2026-03-15 12:50:12] 2026-03-15 11:49:40,589 | INFO     | all job control threads have been joined
[2026-03-15 12:50:12] 2026-03-15 11:49:40,772 | INFO     | [data] control thread has finished
[2026-03-15 12:50:12] 2026-03-15 11:49:40,848 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-15 12:50:12] 2026-03-15 11:49:41,034 | INFO     | [payload] failed_post thread has finished
[2026-03-15 12:50:12] 2026-03-15 11:49:41,079 | INFO     | [payload] control thread has finished
[2026-03-15 12:50:12] 2026-03-15 11:49:41,106 | INFO     | [data] copytool_in thread has finished
[2026-03-15 12:50:12] 2026-03-15 11:49:41,168 | INFO     | [payload] validate_post thread has finished
[2026-03-15 12:50:12] 2026-03-15 11:49:41,176 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-15 12:50:12] 2026-03-15 11:49:41,342 | INFO     | [job] validate thread has finished
[2026-03-15 12:50:12] 2026-03-15 11:49:41,509 | INFO     | [data] copytool_out thread has finished
[2026-03-15 12:50:12] 2026-03-15 11:49:41,596 | INFO     | [job] control thread has finished
[2026-03-15 12:50:12] 2026-03-15 11:49:41,701 | INFO     | [payload] execute_payloads thread has finished
[2026-03-15 12:50:12] 2026-03-15 11:49:41,853 | INFO     | [job] queue monitor thread has finished
[2026-03-15 12:50:12] 2026-03-15 11:49:41,867 | INFO     | [job] create_data_payload thread has finished
[2026-03-15 12:50:12] 2026-03-15 11:49:43,501 | INFO     | [data] queue_monitor thread has finished
[2026-03-15 12:50:12] 2026-03-15 11:49:59,951 | INFO     | [monitor] cgroup control has ended
[2026-03-15 12:50:12] 2026-03-15 11:50:00,942 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140671427061568)>', '<ExcThread(monitor, started 140670706640640)>']
[2026-03-15 12:50:12] 2026-03-15 11:50:05,967 | INFO     | all workflow threads have been joined
[2026-03-15 12:50:12] 2026-03-15 11:50:05,967 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-15 12:50:12] 2026-03-15 11:50:05,967 | INFO     | traces error code: 0
[2026-03-15 12:50:12] 2026-03-15 11:50:05,967 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-15 12:50:12] 2026-03-15 11:50:07,615 | INFO     | 12640s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2026-03-15 12:50:12] 2026-03-15 11:50:08,760 | INFO     | PID=4937 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-03-15 12:50:12] 2026-03-15 11:50:08,760 | INFO     | .. there are 9 such processes running
[2026-03-15 12:50:12] 2026-03-15 11:50:08,760 | INFO     | found 0 job(s) in 20 queues
[2026-03-15 12:50:12] 2026-03-15 11:50:08,761 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-15 12:50:12] 2026-03-15 11:50:08,761 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-15 12:50:12] 2026-03-15 11:50:08,761 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-15 12:50:12] 2026-03-15 11:50:08,761 | CRITICAL | thread 'MainThread' is not alive
[2026-03-15 12:50:12] 2026-03-15 11:50:08,761 | INFO     | [monitor] control thread has ended
[2026-03-15 12:50:12] 2026-03-15 11:50:09,246 [wrapper] ==== pilot stdout END ====
[2026-03-15 12:50:12] 2026-03-15 11:50:09,362 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-15 12:50:12] 2026-03-15 11:50:09,461 [wrapper] pilotpid: 4937
[2026-03-15 12:50:12] 2026-03-15 11:50:09,553 [wrapper] Pilot exit status: 0
[2026-03-15 12:50:12] 2026-03-15 11:50:09,897 [wrapper] pandaids: 7049490221
[2026-03-15 12:50:12] 2026-03-15 11:50:10,599 [wrapper] cleanup supervisor_pilot 17110 4938
[2026-03-15 12:50:12] 2026-03-15 11:50:10,646 [wrapper] Test setup, not cleaning
[2026-03-15 12:50:12] 2026-03-15 11:50:10,735 [wrapper] apfmon messages muted
[2026-03-15 12:50:12] 2026-03-15 11:50:10,805 [wrapper] ==== wrapper stdout END ====
[2026-03-15 12:50:12] 2026-03-15 11:50:10,845 [wrapper] ==== wrapper stderr END ====
[2026-03-15 12:50:12]  *** Error codes and diagnostics ***
[2026-03-15 12:50:12]     "exeErrorCode": 0,
[2026-03-15 12:50:12]     "exeErrorDiag": "",
[2026-03-15 12:50:12]     "pilotErrorCode": 0,
[2026-03-15 12:50:12]     "pilotErrorDiag": "",
[2026-03-15 12:50:12]  *** Listing of results directory ***
[2026-03-15 12:50:12] total 611232
[2026-03-15 12:50:12] -rw-r--r--. 1 boinc boinc      5111 Mar 14 20:43 queuedata.json
[2026-03-15 12:50:12] -rwx------. 1 boinc boinc     36322 Mar 14 20:44 runpilot2-wrapper.sh
[2026-03-15 12:50:12] -rw-r--r--. 1 boinc boinc    585013 Mar 14 20:45 pilot3.tar.gz
[2026-03-15 12:50:12] -rw-r--r--. 1 boinc boinc       100 Mar 15 09:15 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-15 12:50:12] -rwxr-xr-x. 1 boinc boinc      7986 Mar 15 09:15 run_atlas
[2026-03-15 12:50:12] -rw-r--r--. 1 boinc boinc       105 Mar 15 09:15 job.xml
[2026-03-15 12:50:12] -rw-r--r--. 1 boinc boinc      6392 Mar 15 09:15 init_data.xml
[2026-03-15 12:50:12] -rw-r--r--. 2 boinc boinc 438312480 Mar 15 09:15 EVNT.46701403._000649.pool.root.1
[2026-03-15 12:50:12] -rw-r--r--. 2 boinc boinc     15845 Mar 15 09:15 start_atlas.sh
[2026-03-15 12:50:12] drwxrwx--x. 2 boinc boinc        68 Mar 15 09:15 shared
[2026-03-15 12:50:12] -rw-r--r--. 2 boinc boinc    597537 Mar 15 09:15 input.tar.gz
[2026-03-15 12:50:12] -rw-r--r--. 1 boinc boinc         0 Mar 15 09:15 boinc_lockfile
[2026-03-15 12:50:12] -rw-r--r--. 1 boinc boinc      2564 Mar 15 09:15 pandaJob.out
[2026-03-15 12:50:12] -rw-------. 1 boinc boinc       415 Mar 15 09:20 workernode_map.json
[2026-03-15 12:50:12] -rw-------. 1 boinc boinc   1006481 Mar 15 09:20 agis_schedconf.cvmfs.json
[2026-03-15 12:50:12] drwx------. 5 boinc boinc      4096 Mar 15 09:20 pilot3
[2026-03-15 12:50:12] -rw-------. 1 boinc boinc 179244020 Mar 15 12:48 HITS.48955006._051738.pool.root.1
[2026-03-15 12:50:12] -rw-r--r--. 1 boinc boinc       532 Mar 15 12:48 boinc_task_state.xml
[2026-03-15 12:50:12] -rw-------. 1 boinc boinc      1012 Mar 15 12:49 memory_monitor_summary.json
[2026-03-15 12:50:12] -rw-------. 1 boinc boinc   1511579 Mar 15 12:49 agis_ddmendpoints.agis.ALL.json
[2026-03-15 12:50:12] -rw-------. 1 boinc boinc    461369 Mar 15 12:49 log.48955006._051738.job.log.tgz.1
[2026-03-15 12:50:12] -rw-------. 1 boinc boinc        95 Mar 15 12:49 pilot_heartbeat.json
[2026-03-15 12:50:12] -rw-------. 1 boinc boinc      6327 Mar 15 12:49 heartbeat.json
[2026-03-15 12:50:12] -rw-r--r--. 1 boinc boinc      8192 Mar 15 12:49 boinc_mmap_file
[2026-03-15 12:50:12] -rw-r--r--. 1 boinc boinc        28 Mar 15 12:49 wrapper_checkpoint.txt
[2026-03-15 12:50:12] -rw-------. 1 boinc boinc      1005 Mar 15 12:50 pilotlog.txt
[2026-03-15 12:50:12] -rw-------. 1 boinc boinc   1754339 Mar 15 12:50 log.48955006._051738.job.log.1
[2026-03-15 12:50:12] -rw-------. 1 boinc boinc       357 Mar 15 12:50 output.list
[2026-03-15 12:50:12] -rw-r--r--. 1 boinc boinc       620 Mar 15 12:50 runtime_log
[2026-03-15 12:50:12] -rw-------. 1 boinc boinc   2232320 Mar 15 12:50 result.tar.gz
[2026-03-15 12:50:12] -rw-r--r--. 1 boinc boinc      8832 Mar 15 12:50 runtime_log.err
[2026-03-15 12:50:12] -rw-------. 1 boinc boinc       654 Mar 15 12:50 r2mLDm15jL9n9Rq4apOajLDm4fhM0noT9bVooX4SDmwTrLDmysm1Qn.diag
[2026-03-15 12:50:12] -rw-r--r--. 1 boinc boinc     20717 Mar 15 12:50 stderr.txt
[2026-03-15 12:50:12] HITS file was successfully produced:
[2026-03-15 12:50:12] -rw-------. 1 boinc boinc 179244020 Mar 15 12:48 shared/HITS.pool.root.1
[2026-03-15 12:50:12]  *** Contents of shared directory: ***
[2026-03-15 12:50:12] total 605864
[2026-03-15 12:50:12] -rw-r--r--. 2 boinc boinc 438312480 Mar 15 09:15 ATLAS.root_0
[2026-03-15 12:50:12] -rw-r--r--. 2 boinc boinc     15845 Mar 15 09:15 start_atlas.sh
[2026-03-15 12:50:12] -rw-r--r--. 2 boinc boinc    597537 Mar 15 09:15 input.tar.gz
[2026-03-15 12:50:12] -rw-------. 1 boinc boinc 179244020 Mar 15 12:48 HITS.pool.root.1
[2026-03-15 12:50:12] -rw-------. 1 boinc boinc   2232320 Mar 15 12:50 result.tar.gz
12:50:13 (855): run_atlas exited; CPU time 47768.370694
12:50:13 (855): called boinc_finish(0)

</stderr_txt>
]]>

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