Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
10:36:08 (1848996): wrapper (7.7.26015): starting
10:36:08 (1848996): wrapper: running run_atlas (--nthreads 2)
[2026-03-15 10:36:08] Arguments: --nthreads 2
[2026-03-15 10:36:08] Threads: 2
[2026-03-15 10:36:08] Checking for CVMFS
[2026-03-15 10:36:08] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-15 10:36:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-15 10:36:09] Running cvmfs_config stat atlas.cern.ch
[2026-03-15 10:36:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-15 10:36:09] 2.9.2.0 12722 18660 61588 157308 2 50 32622898 36864001 0 130560 0 5388689 99.977 687389 6088 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-03-15 10:36:09] CVMFS is ok
[2026-03-15 10:36:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-15 10:36:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-15 10:36:09] Further information can be found at the LHC@home message board.
[2026-03-15 10:36:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-15 10:36:09] Checking for apptainer binary...
[2026-03-15 10:36:09] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-15 10:36:09] Running /usr/bin/apptainer --version
[2026-03-15 10:36:09] apptainer version 1.4.1-1.1
[2026-03-15 10:36:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-15 10:36:09] thA334a
[2026-03-15 10:36:09] apptainer works
[2026-03-15 10:36:09] Set ATHENA_PROC_NUMBER=2
[2026-03-15 10:36:09] Set ATHENA_CORE_NUMBER=2
[2026-03-15 10:36:09] Starting ATLAS job with PandaID=7053420480
[2026-03-15 10:36:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-15 12:36:41]  *** The last 200 lines of the pilot log: ***
[2026-03-15 12:36:41] 2026-03-15 11:36:09,935 | INFO     | did not find any defunct processes belonging to 1857438
[2026-03-15 12:36:41] 2026-03-15 11:36:09,935 | INFO     | did not find any defunct processes belonging to 1857438
[2026-03-15 12:36:41] 2026-03-15 11:36:09,935 | INFO     | ready for new job
[2026-03-15 12:36:41] 2026-03-15 11:36:09,936 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-15 12:36:41] 2026-03-15 11:36:09,936 | INFO     | **************************************
[2026-03-15 12:36:41] 2026-03-15 11:36:09,936 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-15 12:36:41] 2026-03-15 11:36:09,936 | INFO     | **************************************
[2026-03-15 12:36:41] 2026-03-15 11:36:09,936 | INFO     | 
[2026-03-15 12:36:41] 2026-03-15 11:36:09,936 | INFO     | architecture information:
[2026-03-15 12:36:41] 2026-03-15 11:36:09,936 | INFO     | executing command: cat /etc/os-release
[2026-03-15 12:36:41] 2026-03-15 11:36:09,946 | INFO     | cat /etc/os-release:
[2026-03-15 12:36:41] NAME="CentOS Linux"
[2026-03-15 12:36:41] VERSION="7 (Core)"
[2026-03-15 12:36:41] ID="centos"
[2026-03-15 12:36:41] ID_LIKE="rhel fedora"
[2026-03-15 12:36:41] VERSION_ID="7"
[2026-03-15 12:36:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-15 12:36:41] ANSI_COLOR="0;31"
[2026-03-15 12:36:41] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-15 12:36:41] HOME_URL="https://www.centos.org/"
[2026-03-15 12:36:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-15 12:36:41] 
[2026-03-15 12:36:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-15 12:36:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-15 12:36:41] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-15 12:36:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-15 12:36:41] 
[2026-03-15 12:36:41] 2026-03-15 11:36:09,946 | INFO     | **************************************
[2026-03-15 12:36:41] 2026-03-15 11:36:10,450 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-03-15 12:36:41] 2026-03-15 11:36:10,462 | INFO     | sufficient remaining disk space (491505319936 B)
[2026-03-15 12:36:41] 2026-03-15 11:36:10,462 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-15 12:36:41] 2026-03-15 11:36:10,462 | INFO     | current server update state: UPDATING_FINAL
[2026-03-15 12:36:41] 2026-03-15 11:36:10,462 | INFO     | update_server=False
[2026-03-15 12:36:41] 2026-03-15 11:36:10,463 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-15 12:36:41] 2026-03-15 11:36:10,463 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-15 12:36:41] 2026-03-15 11:36:10,463 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-15 12:36:41] 2026-03-15 11:36:10,531 | INFO     | all payload control threads have been joined
[2026-03-15 12:36:41] 2026-03-15 11:36:10,604 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-15 12:36:41] 2026-03-15 11:36:10,604 | INFO     | aborting loop
[2026-03-15 12:36:41] 2026-03-15 11:36:11,352 | INFO     | all data control threads have been joined
[2026-03-15 12:36:41] 2026-03-15 11:36:11,429 | INFO     | all job control threads have been joined
[2026-03-15 12:36:41] 2026-03-15 11:36:11,468 | INFO     | [job] retrieve thread has finished
[2026-03-15 12:36:41] 2026-03-15 11:36:11,469 | INFO     | [job] queue monitor thread has finished
[2026-03-15 12:36:41] 2026-03-15 11:36:11,537 | INFO     | [payload] control thread has finished
[2026-03-15 12:36:41] 2026-03-15 11:36:11,610 | INFO     | [job] job monitor thread has finished
[2026-03-15 12:36:41] 2026-03-15 11:36:11,630 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-15 12:36:41] 2026-03-15 11:36:11,897 | INFO     | [payload] failed_post thread has finished
[2026-03-15 12:36:41] 2026-03-15 11:36:12,169 | INFO     | [payload] execute_payloads thread has finished
[2026-03-15 12:36:41] 2026-03-15 11:36:12,200 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-15 12:36:41] 2026-03-15 11:36:12,358 | INFO     | [data] control thread has finished
[2026-03-15 12:36:41] 2026-03-15 11:36:12,361 | INFO     | [job] validate thread has finished
[2026-03-15 12:36:41] 2026-03-15 11:36:12,435 | INFO     | [job] control thread has finished
[2026-03-15 12:36:41] 2026-03-15 11:36:12,594 | INFO     | [payload] validate_post thread has finished
[2026-03-15 12:36:41] 2026-03-15 11:36:12,604 | INFO     | [payload] validate_pre thread has finished
[2026-03-15 12:36:41] 2026-03-15 11:36:12,605 | INFO     | [job] create_data_payload thread has finished
[2026-03-15 12:36:41] 2026-03-15 11:36:12,685 | INFO     | [data] copytool_in thread has finished
[2026-03-15 12:36:41] 2026-03-15 11:36:13,636 | INFO     | [data] copytool_out thread has finished
[2026-03-15 12:36:41] 2026-03-15 11:36:14,470 | INFO     | [data] queue_monitor thread has finished
[2026-03-15 12:36:41] 2026-03-15 11:36:20,550 [wrapper] supervise_pilot (15 min periods counter: 9)
[2026-03-15 12:36:41] 2026-03-15 11:36:33,191 | INFO     | [monitor] cgroup control has ended
[2026-03-15 12:36:41] 2026-03-15 11:36:34,693 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140162208073536)>', '<ExcThread(monitor, started 140161341970176)>']
[2026-03-15 12:36:41] 2026-03-15 11:36:39,710 | INFO     | all workflow threads have been joined
[2026-03-15 12:36:41] 2026-03-15 11:36:39,711 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-15 12:36:41] 2026-03-15 11:36:39,712 | INFO     | traces error code: 0
[2026-03-15 12:36:41] 2026-03-15 11:36:39,712 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-15 12:36:41] 2026-03-15 11:36:41,221 | INFO     | PID=1853026 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-15 12:36:41] 2026-03-15 11:36:41,222 | INFO     | found 0 job(s) in 20 queues
[2026-03-15 12:36:41] 2026-03-15 11:36:41,222 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-15 12:36:41] 2026-03-15 11:36:41,222 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-15 12:36:41] 2026-03-15 11:36:41,222 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-15 12:36:41] 2026-03-15 11:36:41,222 | INFO     | [monitor] control thread has ended
[2026-03-15 12:36:41] 2026-03-15 11:36:41,260 [wrapper] ==== pilot stdout END ====
[2026-03-15 12:36:41] 2026-03-15 11:36:41,262 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-15 12:36:41] 2026-03-15 11:36:41,265 [wrapper] pilotpid: 1853026
[2026-03-15 12:36:41] 2026-03-15 11:36:41,267 [wrapper] Pilot exit status: 0
[2026-03-15 12:36:41] 2026-03-15 11:36:41,273 [wrapper] pandaids: 7053420480
[2026-03-15 12:36:41] 2026-03-15 11:36:41,285 [wrapper] cleanup supervisor_pilot 1862790 1853027
[2026-03-15 12:36:41] 2026-03-15 11:36:41,287 [wrapper] Test setup, not cleaning
[2026-03-15 12:36:41] 2026-03-15 11:36:41,289 [wrapper] apfmon messages muted
[2026-03-15 12:36:41] 2026-03-15 11:36:41,291 [wrapper] ==== wrapper stdout END ====
[2026-03-15 12:36:41] 2026-03-15 11:36:41,293 [wrapper] ==== wrapper stderr END ====
[2026-03-15 12:36:41]  *** Error codes and diagnostics ***
[2026-03-15 12:36:41]     "exeErrorCode": 0,
[2026-03-15 12:36:41]     "exeErrorDiag": "",
[2026-03-15 12:36:41]     "pilotErrorCode": 0,
[2026-03-15 12:36:41]     "pilotErrorDiag": "",
[2026-03-15 12:36:41]  *** Listing of results directory ***
[2026-03-15 12:36:41] total 617896
[2026-03-15 12:36:41] -rw-r--r-- 1 boinc boinc    585013 Mar 14 20:45 pilot3.tar.gz
[2026-03-15 12:36:41] -rwx------ 1 boinc boinc     36322 Mar 14 20:45 runpilot2-wrapper.sh
[2026-03-15 12:36:41] -rw-r--r-- 1 boinc boinc      5111 Mar 14 20:47 queuedata.json
[2026-03-15 12:36:41] -rw-r--r-- 1 boinc boinc       100 Mar 15 10:36 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-15 12:36:41] -rwxr-xr-x 1 boinc boinc      7986 Mar 15 10:36 run_atlas
[2026-03-15 12:36:41] -rw-r--r-- 1 boinc boinc       105 Mar 15 10:36 job.xml
[2026-03-15 12:36:41] -rw-r--r-- 2 boinc boinc 438478096 Mar 15 10:36 EVNT.46701403._001501.pool.root.1
[2026-03-15 12:36:41] -rw-r--r-- 2 boinc boinc    597530 Mar 15 10:36 input.tar.gz
[2026-03-15 12:36:41] -rw-r--r-- 2 boinc boinc     15845 Mar 15 10:36 start_atlas.sh
[2026-03-15 12:36:41] drwxrwx--x 2 boinc boinc      4096 Mar 15 10:36 shared
[2026-03-15 12:36:41] -rw-r--r-- 1 boinc boinc         0 Mar 15 10:36 boinc_setup_complete
[2026-03-15 12:36:41] -rw-r--r-- 1 boinc boinc      6206 Mar 15 10:36 init_data.xml
[2026-03-15 12:36:41] -rw-r--r-- 1 boinc boinc         0 Mar 15 10:36 boinc_lockfile
[2026-03-15 12:36:41] -rw-r--r-- 1 boinc boinc      2562 Mar 15 10:36 pandaJob.out
[2026-03-15 12:36:41] -rw------- 1 boinc boinc   1006481 Mar 15 10:36 agis_schedconf.cvmfs.json
[2026-03-15 12:36:41] -rw------- 1 boinc boinc   1511579 Mar 15 10:36 agis_ddmendpoints.agis.ALL.json
[2026-03-15 12:36:41] -rw------- 1 boinc boinc       420 Mar 15 10:36 workernode_map.json
[2026-03-15 12:36:41] drwx------ 5 boinc boinc      4096 Mar 15 10:36 pilot3
[2026-03-15 12:36:41] -rw------- 1 boinc boinc 187655717 Mar 15 12:35 HITS.48955010._051181.pool.root.1
[2026-03-15 12:36:41] -rw------- 1 boinc boinc        95 Mar 15 12:35 pilot_heartbeat.json
[2026-03-15 12:36:41] -rw-r--r-- 1 boinc boinc       531 Mar 15 12:35 boinc_task_state.xml
[2026-03-15 12:36:41] -rw------- 1 boinc boinc      1010 Mar 15 12:36 memory_monitor_summary.json
[2026-03-15 12:36:41] -rw------- 1 boinc boinc    305461 Mar 15 12:36 log.48955010._051181.job.log.tgz.1
[2026-03-15 12:36:41] -rw------- 1 boinc boinc      6298 Mar 15 12:36 heartbeat.json
[2026-03-15 12:36:41] -rw-r--r-- 1 boinc boinc      8192 Mar 15 12:36 boinc_mmap_file
[2026-03-15 12:36:41] -rw-r--r-- 1 boinc boinc        27 Mar 15 12:36 wrapper_checkpoint.txt
[2026-03-15 12:36:41] -rw------- 1 boinc boinc       747 Mar 15 12:36 pilotlog.txt
[2026-03-15 12:36:41] -rw------- 1 boinc boinc   1032593 Mar 15 12:36 log.48955010._051181.job.log.1
[2026-03-15 12:36:41] -rw------- 1 boinc boinc       357 Mar 15 12:36 output.list
[2026-03-15 12:36:41] -rw-r--r-- 1 boinc boinc       620 Mar 15 12:36 runtime_log
[2026-03-15 12:36:41] -rw------- 1 boinc boinc   1351680 Mar 15 12:36 result.tar.gz
[2026-03-15 12:36:41] -rw-r--r-- 1 boinc boinc      8901 Mar 15 12:36 runtime_log.err
[2026-03-15 12:36:41] -rw------- 1 boinc boinc       658 Mar 15 12:36 FGUKDm36jL9n9Rq4apOajLDm4fhM0noT9bVooX4SDmacrLDmbsYIim.diag
[2026-03-15 12:36:41] -rw-r--r-- 1 boinc boinc      9852 Mar 15 12:36 stderr.txt
[2026-03-15 12:36:41] HITS file was successfully produced:
[2026-03-15 12:36:41] -rw------- 1 boinc boinc 187655717 Mar 15 12:35 shared/HITS.pool.root.1
[2026-03-15 12:36:41]  *** Contents of shared directory: ***
[2026-03-15 12:36:41] total 613388
[2026-03-15 12:36:41] -rw-r--r-- 2 boinc boinc 438478096 Mar 15 10:36 ATLAS.root_0
[2026-03-15 12:36:41] -rw-r--r-- 2 boinc boinc    597530 Mar 15 10:36 input.tar.gz
[2026-03-15 12:36:41] -rw-r--r-- 2 boinc boinc     15845 Mar 15 10:36 start_atlas.sh
[2026-03-15 12:36:41] -rw------- 1 boinc boinc 187655717 Mar 15 12:35 HITS.pool.root.1
[2026-03-15 12:36:41] -rw------- 1 boinc boinc   1351680 Mar 15 12:36 result.tar.gz
12:36:42 (1848996): run_atlas exited; CPU time 13757.352232
12:36:42 (1848996): called boinc_finish(0)

</stderr_txt>
]]>

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