Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:23:54 (2941258): wrapper (7.7.26015): starting
18:23:54 (2941258): wrapper: running run_atlas (--nthreads 12)
[2026-03-15 18:23:54] Arguments: --nthreads 12
[2026-03-15 18:23:54] Threads: 12
[2026-03-15 18:23:54] Checking for CVMFS
[2026-03-15 18:23:54] No cvmfs_config command found, will try listing directly
[2026-03-15 18:23:54] CVMFS is ok
[2026-03-15 18:23:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-15 18:23:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-15 18:23:54] Further information can be found at the LHC@home message board.
[2026-03-15 18:23:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-15 18:23:54] Checking for apptainer binary...
[2026-03-15 18:23:54] which: no apptainer in ((null))
[2026-03-15 18:23:54] apptainer is not installed, using version from CVMFS
[2026-03-15 18:23:54] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-15 18:23:54] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot96/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut18.grid.cesnet.cz
[2026-03-15 18:23:54] apptainer works
[2026-03-15 18:23:54] Set ATHENA_PROC_NUMBER=12
[2026-03-15 18:23:54] Set ATHENA_CORE_NUMBER=12
[2026-03-15 18:23:54] Starting ATLAS job with PandaID=7049198554
[2026-03-15 18:23:54] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot96/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-15 18:52:00]  *** The last 200 lines of the pilot log: ***
[2026-03-15 18:52:00]  is_altstaged=None
[2026-03-15 18:52:00]  is_tar=False
[2026-03-15 18:52:00]  lfn=log.48955010._050951.job.log.tgz.1
[2026-03-15 18:52:00]  mtime=0
[2026-03-15 18:52:00]  protocol_id=None
[2026-03-15 18:52:00]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-15 18:52:00]  replicas=None
[2026-03-15 18:52:00]  scope=mc23_13p6TeV
[2026-03-15 18:52:00]  status=None
[2026-03-15 18:52:00]  status_code=0
[2026-03-15 18:52:00]  storage_token=
[2026-03-15 18:52:00]  surl=/var/lib/boinc/var/slot96/slots/0/PanDA_Pilot-7049198554/log.48955010._050951.job.log.tgz.1
[2026-03-15 18:52:00]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/97/9e/log.48955010._050951.job.log.tgz.1
[2026-03-15 18:52:00]  workdir=None
[2026-03-15 18:52:00] ]
[2026-03-15 18:52:00] 2026-03-15 17:49:05,607 | INFO     | transferring file log.48955010._050951.job.log.tgz.1 from /var/lib/boinc/var/slot96/slots/0/PanDA_Pilot-7049198554/log.48955010._050951.job.log.tgz.1 to /var/lib/b
[2026-03-15 18:52:00] 2026-03-15 17:49:05,608 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot96/slots/0/PanDA_Pilot-7049198554/log.48955010._050951.job.log.tgz.1 /var/lib/boinc/var/slot96/slots/0/lo
[2026-03-15 18:52:00] 2026-03-15 17:49:05,622 | INFO     | adding to output.list: log.48955010._050951.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/97/9e/log.48955010._050951.job.log.tg
[2026-03-15 18:52:00] 2026-03-15 17:49:05,623 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-15 18:52:00] 2026-03-15 17:49:05,623 | INFO     | summary of transferred files:
[2026-03-15 18:52:00] 2026-03-15 17:49:05,623 | INFO     |  -- lfn=log.48955010._050951.job.log.tgz.1, status_code=0, status=transferred
[2026-03-15 18:52:00] 2026-03-15 17:49:05,623 | INFO     | stage-out finished correctly
[2026-03-15 18:52:00] 2026-03-15 17:49:06,136 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-15 18:52:00] 2026-03-15 17:49:06,983 | INFO     | time since job start (1502s) is within the limit (345600.0s)
[2026-03-15 18:52:00] 2026-03-15 17:49:08,791 | INFO     | job 7049198554 has state=finished
[2026-03-15 18:52:00] 2026-03-15 17:49:08,791 | INFO     | preparing for final server update for job 7049198554 in state='finished'
[2026-03-15 18:52:00] 2026-03-15 17:49:08,791 | INFO     | reading metadata from: /var/lib/boinc/var/slot96/slots/0/PanDA_Pilot-7049198554/jobReport.json
[2026-03-15 18:52:00] 2026-03-15 17:49:08,793 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot96/slots/0/workernode_map.json
[2026-03-15 18:52:00] 2026-03-15 17:49:08,793 | INFO     | this job has now completed (state=finished)
[2026-03-15 18:52:00] 2026-03-15 17:49:08,793 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-15 18:52:00] 2026-03-15 17:49:08,793 | INFO     | log transfer has been attempted: DONE
[2026-03-15 18:52:00] 2026-03-15 17:49:08,793 | INFO     | job 7049198554 has finished - writing final server update
[2026-03-15 18:52:00] 2026-03-15 17:49:08,793 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_17525/.job.ad'
[2026-03-15 18:52:00] 2026-03-15 17:49:08,793 | INFO     | total number of processed events: 400 (read)
[2026-03-15 18:52:00] 2026-03-15 17:49:08,811 | INFO     | using path: /var/lib/boinc/var/slot96/slots/0/PanDA_Pilot-7049198554/memory_monitor_summary.json (trf name=prmon)
[2026-03-15 18:52:00] 2026-03-15 17:49:08,811 | INFO     | extracted standard info from prmon json
[2026-03-15 18:52:00] 2026-03-15 17:49:08,811 | INFO     | extracted standard memory fields from prmon json
[2026-03-15 18:52:00] 2026-03-15 17:49:08,811 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-15 18:52:00] 2026-03-15 17:49:08,811 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-15 18:52:00] 2026-03-15 17:49:08,811 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-15 18:52:00] 2026-03-15 17:49:08,812 | INFO     | fitting pss+swap vs Time
[2026-03-15 18:52:00] 2026-03-15 17:49:08,812 | INFO     | sum of square deviations: 1802824.5
[2026-03-15 18:52:00] 2026-03-15 17:49:08,812 | INFO     | sum of deviations: 16303988.5
[2026-03-15 18:52:00] 2026-03-15 17:49:08,812 | INFO     | mean x: 1773596286.5
[2026-03-15 18:52:00] 2026-03-15 17:49:08,812 | INFO     | mean y: 2706139.0555555555
[2026-03-15 18:52:00] 2026-03-15 17:49:08,812 | INFO     | intersect: -16036954659.174503
[2026-03-15 18:52:00] 2026-03-15 17:49:08,812 | INFO     | chi2: 3.8825175166220906e-05
[2026-03-15 18:52:00] 2026-03-15 17:49:08,812 | INFO     | current memory leak: 9.04 B/s (using 18 data points, chi2=0.00)
[2026-03-15 18:52:00] 2026-03-15 17:49:08,813 | INFO     | could have reported an average CPU frequency of 3645 MHz (4 samples)
[2026-03-15 18:52:00] 2026-03-15 17:49:08,813 | INFO     | ..............................
[2026-03-15 18:52:00] 2026-03-15 17:49:08,813 | INFO     | . Timing measurements:
[2026-03-15 18:52:00] 2026-03-15 17:49:08,813 | INFO     | . get job = 0 s
[2026-03-15 18:52:00] 2026-03-15 17:49:08,813 | INFO     | . initial setup = 3 s
[2026-03-15 18:52:00] 2026-03-15 17:49:08,813 | INFO     | . payload setup = 3 s
[2026-03-15 18:52:00] 2026-03-15 17:49:08,813 | INFO     | . stage-in = 0 s
[2026-03-15 18:52:00] 2026-03-15 17:49:08,813 | INFO     | . payload execution = 1482 s
[2026-03-15 18:52:00] 2026-03-15 17:49:08,813 | INFO     | . stage-out = 0 s
[2026-03-15 18:52:00] 2026-03-15 17:49:08,813 | INFO     | . log creation = 0 s
[2026-03-15 18:52:00] 2026-03-15 17:49:08,813 | INFO     | ..............................
[2026-03-15 18:52:00] 2026-03-15 17:49:08,860 | INFO     | 
[2026-03-15 18:52:00] 2026-03-15 17:49:08,861 | INFO     | job summary report
[2026-03-15 18:52:00] 2026-03-15 17:49:08,861 | INFO     | --------------------------------------------------
[2026-03-15 18:52:00] 2026-03-15 17:49:08,861 | INFO     | PanDA job id: 7049198554
[2026-03-15 18:52:00] 2026-03-15 17:49:08,861 | INFO     | task id: 48955010
[2026-03-15 18:52:00] 2026-03-15 17:49:08,861 | INFO     | errors: (none)
[2026-03-15 18:52:00] 2026-03-15 17:49:08,861 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-15 18:52:00] 2026-03-15 17:49:08,861 | INFO     | pilot state: finished 
[2026-03-15 18:52:00] 2026-03-15 17:49:08,861 | INFO     | transexitcode: 0
[2026-03-15 18:52:00] 2026-03-15 17:49:08,861 | INFO     | exeerrorcode: 0
[2026-03-15 18:52:00] 2026-03-15 17:49:08,861 | INFO     | exeerrordiag: 
[2026-03-15 18:52:00] 2026-03-15 17:49:08,861 | INFO     | exitcode: 0
[2026-03-15 18:52:00] 2026-03-15 17:49:08,861 | INFO     | exitmsg: OK
[2026-03-15 18:52:00] 2026-03-15 17:49:08,861 | INFO     | cpuconsumptiontime: 15101 s
[2026-03-15 18:52:00] 2026-03-15 17:49:08,861 | INFO     | nevents: 400
[2026-03-15 18:52:00] 2026-03-15 17:49:08,861 | INFO     | neventsw: 0
[2026-03-15 18:52:00] 2026-03-15 17:49:08,861 | INFO     | pid: 2951977
[2026-03-15 18:52:00] 2026-03-15 17:49:08,861 | INFO     | pgrp: 2951977
[2026-03-15 18:52:00] 2026-03-15 17:49:08,861 | INFO     | corecount: 12
[2026-03-15 18:52:00] 2026-03-15 17:49:08,861 | INFO     | event service: False
[2026-03-15 18:52:00] 2026-03-15 17:49:08,861 | INFO     | sizes: {0: 2279706, 1: 2280167, 11: 2280167, 1490: 2314011, 1491: 2314011, 1494: 2314205}
[2026-03-15 18:52:00] 2026-03-15 17:49:08,861 | INFO     | --------------------------------------------------
[2026-03-15 18:52:00] 2026-03-15 17:49:08,862 | INFO     | 
[2026-03-15 18:52:00] 2026-03-15 17:49:08,862 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot96/slots/0
[2026-03-15 18:52:00] 2026-03-15 17:49:08,877 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-15 18:52:00] 2026-03-15 17:49:08,877 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-15 18:52:00] 2026-03-15 17:49:08,877 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-15 18:52:00] 2026-03-15 17:49:08,877 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-15 18:52:00] 2026-03-15 17:49:08,877 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-15 18:52:00] 2026-03-15 17:49:08,877 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-15 18:52:00] 2026-03-15 17:49:08,877 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-15 18:52:00] 2026-03-15 17:49:08,877 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-15 18:52:00] 2026-03-15 17:49:08,877 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-15 18:52:00] 2026-03-15 17:49:08,877 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-15 18:52:00] 2026-03-15 17:49:08,877 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-15 18:52:00] 2026-03-15 17:49:08,877 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-15 18:52:00] 2026-03-15 17:49:08,877 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-15 18:52:00] 2026-03-15 17:49:08,877 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-15 18:52:00] 2026-03-15 17:49:08,877 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-15 18:52:00] 2026-03-15 17:49:08,877 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-15 18:52:00] 2026-03-15 17:49:08,877 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-15 18:52:00] 2026-03-15 17:49:08,877 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-15 18:52:00] 2026-03-15 17:49:08,877 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-15 18:52:00] 2026-03-15 17:49:08,877 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-15 18:52:00] 2026-03-15 17:49:08,877 | INFO     | job 7049198554 has completed (purged errors)
[2026-03-15 18:52:00] 2026-03-15 17:49:08,878 | INFO     | overall cleanup function is called
[2026-03-15 18:52:00] 2026-03-15 17:49:09,885 | INFO     | --- collectZombieJob: --- 10, [2951977]
[2026-03-15 18:52:00] 2026-03-15 17:49:09,885 | INFO     | zombie collector waiting for pid 2951977
[2026-03-15 18:52:00] 2026-03-15 17:49:09,885 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-15 18:52:00] 2026-03-15 17:49:09,885 | INFO     | collected zombie processes
[2026-03-15 18:52:00] 2026-03-15 17:49:09,885 | INFO     | will attempt to kill all subprocesses of pid=2951977
[2026-03-15 18:52:00] 2026-03-15 17:49:10,230 | INFO     | process IDs to be killed: [2951977] (in reverse order)
[2026-03-15 18:52:00] 2026-03-15 17:49:10,376 | WARNING  | found no corresponding commands to process id(s)
[2026-03-15 18:52:00] 2026-03-15 17:49:10,376 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-15 18:52:00] 2026-03-15 17:49:10,400 | INFO     | did not find any defunct processes belonging to 2951977
[2026-03-15 18:52:00] 2026-03-15 17:49:10,422 | INFO     | did not find any defunct processes belonging to 2951977
[2026-03-15 18:52:00] 2026-03-15 17:49:10,422 | INFO     | ready for new job
[2026-03-15 18:52:00] 2026-03-15 17:49:10,422 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-15 18:52:00] 2026-03-15 17:49:10,423 | INFO     | **************************************
[2026-03-15 18:52:00] 2026-03-15 17:49:10,423 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-15 18:52:00] 2026-03-15 17:49:10,423 | INFO     | **************************************
[2026-03-15 18:52:00] 2026-03-15 17:49:10,423 | INFO     | 
[2026-03-15 18:52:00] 2026-03-15 17:49:10,429 | INFO     | architecture information:
[2026-03-15 18:52:00] 2026-03-15 17:49:10,430 | INFO     | executing command: cat /etc/os-release
[2026-03-15 18:52:00] 2026-03-15 17:49:10,442 | INFO     | cat /etc/os-release:
[2026-03-15 18:52:00] NAME="CentOS Linux"
[2026-03-15 18:52:00] VERSION="7 (Core)"
[2026-03-15 18:52:00] ID="centos"
[2026-03-15 18:52:00] ID_LIKE="rhel fedora"
[2026-03-15 18:52:00] VERSION_ID="7"
[2026-03-15 18:52:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-15 18:52:00] ANSI_COLOR="0;31"
[2026-03-15 18:52:00] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-15 18:52:00] HOME_URL="https://www.centos.org/"
[2026-03-15 18:52:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-15 18:52:00] 
[2026-03-15 18:52:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-15 18:52:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-15 18:52:00] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-15 18:52:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-15 18:52:00] 
[2026-03-15 18:52:00] 2026-03-15 17:49:10,443 | INFO     | **************************************
[2026-03-15 18:52:00] 2026-03-15 17:49:10,946 | INFO     | executing command: df -mP /var/lib/boinc/var/slot96/slots/0
[2026-03-15 18:52:00] 2026-03-15 17:49:10,960 | INFO     | sufficient remaining disk space (239785213952 B)
[2026-03-15 18:52:00] 2026-03-15 17:49:10,960 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-15 18:52:00] 2026-03-15 17:49:10,960 | INFO     | current server update state: UPDATING_FINAL
[2026-03-15 18:52:00] 2026-03-15 17:49:10,961 | INFO     | update_server=False
[2026-03-15 18:52:00] 2026-03-15 17:49:10,961 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-15 18:52:00] 2026-03-15 17:49:11,052 | WARNING  | process 2951977 can no longer be monitored (due to stat problems) - aborting
[2026-03-15 18:52:00] 2026-03-15 17:49:11,186 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-15 18:52:00] 2026-03-15 17:49:11,330 | INFO     | using path: /var/lib/boinc/var/slot96/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-15 18:52:00] 2026-03-15 17:49:11,398 | INFO     | all job control threads have been joined
[2026-03-15 18:52:00] 2026-03-15 17:49:11,469 | INFO     | all payload control threads have been joined
[2026-03-15 18:52:00] 2026-03-15 17:49:11,697 | INFO     | all data control threads have been joined
[2026-03-15 18:52:00] 2026-03-15 17:49:11,698 | INFO     | number of running child processes to parent process 2951977: 1
[2026-03-15 18:52:00] 2026-03-15 17:49:11,698 | INFO     | maximum number of monitored processes: 6
[2026-03-15 18:52:00] 2026-03-15 17:49:11,698 | INFO     | aborting job monitoring since job object (job id=7049198554) has expired
[2026-03-15 18:52:00] 2026-03-15 17:49:11,698 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-15 18:52:00] 2026-03-15 17:49:11,698 | INFO     | will abort loop
[2026-03-15 18:52:00] 2026-03-15 17:49:11,966 | INFO     | [job] retrieve thread has finished
[2026-03-15 18:52:00] 2026-03-15 17:49:11,988 | INFO     | [payload] failed_post thread has finished
[2026-03-15 18:52:00] 2026-03-15 17:49:12,190 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-15 18:52:00] 2026-03-15 17:49:12,403 | INFO     | [job] control thread has finished
[2026-03-15 18:52:00] 2026-03-15 17:49:12,475 | INFO     | [payload] control thread has finished
[2026-03-15 18:52:00] 2026-03-15 17:49:12,532 | INFO     | [payload] validate_post thread has finished
[2026-03-15 18:52:00] 2026-03-15 17:49:12,702 | INFO     | [data] control thread has finished
[2026-03-15 18:52:00] 2026-03-15 17:49:12,703 | INFO     | [job] job monitor thread has finished
[2026-03-15 18:52:00] 2026-03-15 17:49:12,781 | INFO     | [job] validate thread has finished
[2026-03-15 18:52:00] 2026-03-15 17:49:12,938 | INFO     | [job] create_data_payload thread has finished
[2026-03-15 18:52:00] 2026-03-15 17:49:13,071 | INFO     | [payload] validate_pre thread has finished
[2026-03-15 18:52:00] 2026-03-15 17:49:13,168 | INFO     | [data] copytool_in thread has finished
[2026-03-15 18:52:00] 2026-03-15 17:49:13,192 | INFO     | [data] copytool_out thread has finished
[2026-03-15 18:52:00] 2026-03-15 17:49:13,371 | INFO     | [payload] execute_payloads thread has finished
[2026-03-15 18:52:00] 2026-03-15 17:49:13,870 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-15 18:52:00] 2026-03-15 17:49:14,876 | INFO     | [job] queue monitor thread has finished
[2026-03-15 18:52:00] 2026-03-15 17:49:16,196 | INFO     | [data] queue_monitor thread has finished
[2026-03-15 18:52:00] 2026-03-15 17:49:21,155 | INFO     | job.realtimelogging is not enabled
[2026-03-15 18:52:00] 2026-03-15 17:49:22,160 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-15 18:52:00] 2026-03-15 17:49:40,528 | INFO     | PID=2945897 has CPU usage=7.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-15 18:52:00] 2026-03-15 17:49:40,528 | INFO     | .. there are 12 such processes running
[2026-03-15 18:52:00] 2026-03-15 17:49:40,529 | INFO     | found 0 job(s) in 20 queues
[2026-03-15 18:52:00] 2026-03-15 17:49:40,530 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-15 18:52:00] 2026-03-15 17:49:40,530 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-15 18:52:00] 2026-03-15 17:50:06,244 | INFO     | [monitor] cgroup control has ended
[2026-03-15 18:52:00] 2026-03-15 17:50:06,933 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23053486716736)>', '<ExcThread(monitor, started 23053242468096)>']
[2026-03-15 18:52:00] 2026-03-15 17:50:07,662 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-15 18:52:00] 2026-03-15 17:50:07,663 | INFO     | [monitor] control thread has ended
[2026-03-15 18:52:00] 2026-03-15 17:50:11,956 | INFO     | all workflow threads have been joined
[2026-03-15 18:52:00] 2026-03-15 17:50:11,956 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-15 18:52:00] 2026-03-15 17:50:11,956 | INFO     | traces error code: 0
[2026-03-15 18:52:00] 2026-03-15 17:50:11,957 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-15 18:52:00] 2026-03-15 17:50:12,093 [wrapper] ==== pilot stdout END ====
[2026-03-15 18:52:00] 2026-03-15 17:50:12,096 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-15 18:52:00] 2026-03-15 17:50:12,098 [wrapper] pilotpid: 2945897
[2026-03-15 18:52:00] 2026-03-15 17:50:12,100 [wrapper] Pilot exit status: 0
[2026-03-15 18:52:00] 2026-03-15 17:50:12,108 [wrapper] pandaids: 7049198554
[2026-03-15 18:52:00] 2026-03-15 17:50:12,216 [wrapper] cleanup supervisor_pilot 3093963 2945898
[2026-03-15 18:52:00] 2026-03-15 17:50:12,218 [wrapper] Test setup, not cleaning
[2026-03-15 18:52:00] 2026-03-15 17:50:12,220 [wrapper] apfmon messages muted
[2026-03-15 18:52:00] 2026-03-15 17:50:12,221 [wrapper] ==== wrapper stdout END ====
[2026-03-15 18:52:00] 2026-03-15 17:50:12,222 [wrapper] ==== wrapper stderr END ====
[2026-03-15 18:52:00]  *** Error codes and diagnostics ***
[2026-03-15 18:52:00]     "exeErrorCode": 0,
[2026-03-15 18:52:00]     "exeErrorDiag": "",
[2026-03-15 18:52:00]     "pilotErrorCode": 0,
[2026-03-15 18:52:00]     "pilotErrorDiag": "",
[2026-03-15 18:52:00]  *** Listing of results directory ***
[2026-03-15 18:52:00] total 615584
[2026-03-15 18:52:00] -rw-r--r--. 1 boinc boinc    585013 Mar 14 20:45 pilot3.tar.gz
[2026-03-15 18:52:00] -rwx------. 1 boinc boinc     36322 Mar 14 20:45 runpilot2-wrapper.sh
[2026-03-15 18:52:00] -rw-r--r--. 1 boinc boinc      5111 Mar 14 20:47 queuedata.json
[2026-03-15 18:52:00] -rw-r--r--. 1 boinc boinc       100 Mar 15 18:23 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-15 18:52:00] -rwxr-xr-x. 1 boinc boinc      7986 Mar 15 18:23 run_atlas
[2026-03-15 18:52:00] -rw-r--r--. 1 boinc boinc       105 Mar 15 18:23 job.xml
[2026-03-15 18:52:00] -rw-r--r--. 1 boinc boinc      6707 Mar 15 18:23 init_data.xml
[2026-03-15 18:52:00] -rw-r--r--. 2 boinc boinc 439781217 Mar 15 18:23 EVNT.46701403._001455.pool.root.1
[2026-03-15 18:52:00] -rw-r--r--. 2 boinc boinc     15845 Mar 15 18:23 start_atlas.sh
[2026-03-15 18:52:00] drwxrwx--x. 2 boinc boinc      4096 Mar 15 18:23 shared
[2026-03-15 18:52:00] -rw-r--r--. 2 boinc boinc    597532 Mar 15 18:23 input.tar.gz
[2026-03-15 18:52:00] -rw-r--r--. 1 boinc boinc         0 Mar 15 18:23 boinc_lockfile
[2026-03-15 18:52:00] -rw-r--r--. 1 boinc boinc      2562 Mar 15 18:23 pandaJob.out
[2026-03-15 18:52:00] -rw-------. 1 boinc boinc   1006473 Mar 15 18:24 agis_schedconf.cvmfs.json
[2026-03-15 18:52:00] -rw-------. 1 boinc boinc   1511579 Mar 15 18:24 agis_ddmendpoints.agis.ALL.json
[2026-03-15 18:52:00] -rw-------. 1 boinc boinc       444 Mar 15 18:24 workernode_map.json
[2026-03-15 18:52:00] drwx------. 5 boinc boinc      4096 Mar 15 18:24 pilot3
[2026-03-15 18:52:00] -rw-r--r--. 1 boinc boinc       529 Mar 15 18:48 boinc_task_state.xml
[2026-03-15 18:52:00] -rw-------. 1 boinc boinc 185379018 Mar 15 18:48 HITS.48955010._050951.pool.root.1
[2026-03-15 18:52:00] -rw-------. 1 boinc boinc      1031 Mar 15 18:49 memory_monitor_summary.json
[2026-03-15 18:52:00] -rw-------. 1 boinc boinc    370354 Mar 15 18:49 log.48955010._050951.job.log.tgz.1
[2026-03-15 18:52:00] -rw-------. 1 boinc boinc      6364 Mar 15 18:49 heartbeat.json
[2026-03-15 18:52:00] -rw-------. 1 boinc boinc        95 Mar 15 18:49 pilot_heartbeat.json
[2026-03-15 18:52:00] -rw-------. 1 boinc boinc      5434 Mar 15 18:50 pilotlog.txt
[2026-03-15 18:52:00] -rw-------. 1 boinc boinc    259868 Mar 15 18:50 log.48955010._050951.job.log.1
[2026-03-15 18:52:00] -rw-------. 1 boinc boinc       357 Mar 15 18:50 output.list
[2026-03-15 18:52:00] -rw-r--r--. 1 boinc boinc       620 Mar 15 18:50 runtime_log
[2026-03-15 18:52:00] -rw-------. 1 boinc boinc    645120 Mar 15 18:50 result.tar.gz
[2026-03-15 18:52:00] -rw-------. 1 boinc boinc       655 Mar 15 18:50 wZQLDmt6jL9n9Rq4apOajLDm4fhM0noT9bVooX4SDmDbrLDmRU20Fn.diag
[2026-03-15 18:52:00] -rw-r--r--. 1 boinc boinc      9206 Mar 15 18:50 runtime_log.err
[2026-03-15 18:52:00] -rw-r--r--. 1 boinc boinc        27 Mar 15 18:51 wrapper_checkpoint.txt
[2026-03-15 18:52:00] -rw-r--r--. 1 boinc boinc      8192 Mar 15 18:51 boinc_mmap_file
[2026-03-15 18:52:00] -rw-r--r--. 1 boinc boinc     21350 Mar 15 18:52 stderr.txt
[2026-03-15 18:52:00] HITS file was successfully produced:
[2026-03-15 18:52:00] -rw-------. 1 boinc boinc 185379018 Mar 15 18:48 shared/HITS.pool.root.1
[2026-03-15 18:52:00]  *** Contents of shared directory: ***
[2026-03-15 18:52:00] total 611752
[2026-03-15 18:52:00] -rw-r--r--. 2 boinc boinc 439781217 Mar 15 18:23 ATLAS.root_0
[2026-03-15 18:52:00] -rw-r--r--. 2 boinc boinc     15845 Mar 15 18:23 start_atlas.sh
[2026-03-15 18:52:00] -rw-r--r--. 2 boinc boinc    597532 Mar 15 18:23 input.tar.gz
[2026-03-15 18:52:00] -rw-------. 1 boinc boinc 185379018 Mar 15 18:48 HITS.pool.root.1
[2026-03-15 18:52:00] -rw-------. 1 boinc boinc    645120 Mar 15 18:50 result.tar.gz
18:52:01 (2941258): run_atlas exited; CPU time 15144.821444
18:52:01 (2941258): called boinc_finish(0)

</stderr_txt>
]]>

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