Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
10:40:58 (154736): wrapper (7.7.26015): starting
10:40:58 (154736): wrapper: running run_atlas (--nthreads 3)
[2026-03-15 10:40:58] Arguments: --nthreads 3
[2026-03-15 10:40:58] Threads: 3
[2026-03-15 10:40:58] Checking for CVMFS
[2026-03-15 10:40:58] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-15 10:40:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-15 10:40:59] Running cvmfs_config stat atlas.cern.ch
[2026-03-15 10:40:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-15 10:40:59] 2.9.2.0 3041 894 71452 157308 3 50 31147890 36864001 0 130560 0 434033 99.989 31197 18602 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-03-15 10:40:59] CVMFS is ok
[2026-03-15 10:40:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-15 10:40:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-15 10:40:59] Further information can be found at the LHC@home message board.
[2026-03-15 10:40:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-15 10:40:59] Checking for apptainer binary...
[2026-03-15 10:40:59] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-15 10:40:59] Running /usr/bin/apptainer --version
[2026-03-15 10:40:59] apptainer version 1.4.1-1.1
[2026-03-15 10:40:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-15 10:40:59] atlasA230
[2026-03-15 10:40:59] apptainer works
[2026-03-15 10:40:59] Set ATHENA_PROC_NUMBER=3
[2026-03-15 10:40:59] Set ATHENA_CORE_NUMBER=3
[2026-03-15 10:40:59] Starting ATLAS job with PandaID=7055070557
[2026-03-15 10:40:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-15 12:17:22]  *** The last 200 lines of the pilot log: ***
[2026-03-15 12:17:22] 2026-03-15 11:16:32,273 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-15 12:17:22] 2026-03-15 11:16:32,321 | INFO     | all data control threads have been joined
[2026-03-15 12:17:22] 2026-03-15 11:16:32,695 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-15 12:17:22] 2026-03-15 11:16:32,695 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-15 12:17:22] 2026-03-15 11:16:32,695 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-15 12:17:22] 2026-03-15 11:16:32,695 | INFO     | will abort loop
[2026-03-15 12:17:22] 2026-03-15 11:16:32,716 | INFO     | all job control threads have been joined
[2026-03-15 12:17:22] 2026-03-15 11:16:32,816 | INFO     | all payload control threads have been joined
[2026-03-15 12:17:22] 2026-03-15 11:16:33,275 | INFO     | [job] queue monitor thread has finished
[2026-03-15 12:17:22] 2026-03-15 11:16:33,278 | INFO     | [job] retrieve thread has finished
[2026-03-15 12:17:22] 2026-03-15 11:16:33,280 | INFO     | [job] create_data_payload thread has finished
[2026-03-15 12:17:22] 2026-03-15 11:16:33,327 | INFO     | [data] control thread has finished
[2026-03-15 12:17:22] 2026-03-15 11:16:33,398 | INFO     | [data] copytool_in thread has finished
[2026-03-15 12:17:22] 2026-03-15 11:16:33,702 | INFO     | [job] job monitor thread has finished
[2026-03-15 12:17:22] 2026-03-15 11:16:33,721 | INFO     | [job] control thread has finished
[2026-03-15 12:17:22] 2026-03-15 11:16:33,822 | INFO     | [payload] control thread has finished
[2026-03-15 12:17:22] 2026-03-15 11:16:33,918 | INFO     | [payload] failed_post thread has finished
[2026-03-15 12:17:22] 2026-03-15 11:16:34,241 | INFO     | [payload] execute_payloads thread has finished
[2026-03-15 12:17:22] 2026-03-15 11:16:34,279 | INFO     | [data] copytool_out thread has finished
[2026-03-15 12:17:22] 2026-03-15 11:16:34,573 | INFO     | [payload] validate_post thread has finished
[2026-03-15 12:17:22] 2026-03-15 11:16:34,626 | INFO     | job.realtimelogging is not enabled
[2026-03-15 12:17:22] 2026-03-15 11:16:34,673 | INFO     | [job] validate thread has finished
[2026-03-15 12:17:22] 2026-03-15 11:16:34,775 | INFO     | [payload] validate_pre thread has finished
[2026-03-15 12:17:22] 2026-03-15 11:16:35,456 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-15 12:17:22] 2026-03-15 11:16:35,632 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-15 12:17:22] 2026-03-15 11:16:39,463 | INFO     | [data] queue_monitor thread has finished
[2026-03-15 12:17:22] 2026-03-15 11:17:01,875 | INFO     | PID=158776 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-15 12:17:22] 2026-03-15 11:17:01,875 | INFO     | found 0 job(s) in 20 queues
[2026-03-15 12:17:22] 2026-03-15 11:17:01,875 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-15 12:17:22] 2026-03-15 11:17:01,875 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-15 12:17:22] 2026-03-15 11:17:15,574 | INFO     | [monitor] cgroup control has ended
[2026-03-15 12:17:22] 2026-03-15 11:17:17,400 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140219291440960)>', '<ExcThread(monitor, started 140218644547328)>']
[2026-03-15 12:17:22] 2026-03-15 11:17:17,956 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-15 12:17:22] 2026-03-15 11:17:17,956 | INFO     | [monitor] control thread has ended
[2026-03-15 12:17:22] 2026-03-15 11:17:22,426 | INFO     | all workflow threads have been joined
[2026-03-15 12:17:22] 2026-03-15 11:17:22,426 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-15 12:17:22] 2026-03-15 11:17:22,426 | INFO     | traces error code: 0
[2026-03-15 12:17:22] 2026-03-15 11:17:22,426 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-15 12:17:22] 2026-03-15 11:17:22,485 [wrapper] ==== pilot stdout END ====
[2026-03-15 12:17:22] 2026-03-15 11:17:22,487 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-15 12:17:22] 2026-03-15 11:17:22,489 [wrapper] pilotpid: 158776
[2026-03-15 12:17:22] 2026-03-15 11:17:22,492 [wrapper] Pilot exit status: 0
[2026-03-15 12:17:22] 2026-03-15 11:17:22,499 [wrapper] pandaids: 7055070557
[2026-03-15 12:17:22] 2026-03-15 11:17:22,516 [wrapper] cleanup supervisor_pilot  169043 158777
[2026-03-15 12:17:22] 2026-03-15 11:17:22,518 [wrapper] Test setup, not cleaning
[2026-03-15 12:17:22] 2026-03-15 11:17:22,520 [wrapper] apfmon messages muted
[2026-03-15 12:17:22] 2026-03-15 11:17:22,523 [wrapper] ==== wrapper stdout END ====
[2026-03-15 12:17:22] 2026-03-15 11:17:22,525 [wrapper] ==== wrapper stderr END ====
[2026-03-15 12:17:22]  *** Error codes and diagnostics ***
[2026-03-15 12:17:22]     "exeErrorCode": 0,
[2026-03-15 12:17:22]     "exeErrorDiag": "",
[2026-03-15 12:17:22]     "pilotErrorCode": 0,
[2026-03-15 12:17:22]     "pilotErrorDiag": "",
[2026-03-15 12:17:22]  *** Listing of results directory ***
[2026-03-15 12:17:22] total 409816
[2026-03-15 12:17:22] -rw-r--r-- 1 boinc boinc    585013 Mar 14 19:20 pilot3.tar.gz
[2026-03-15 12:17:22] -rw-r--r-- 1 boinc boinc      5111 Mar 14 19:20 queuedata.json
[2026-03-15 12:17:22] -rwx------ 1 boinc boinc     36322 Mar 14 19:21 runpilot2-wrapper.sh
[2026-03-15 12:17:22] -rw-r--r-- 1 boinc boinc       100 Mar 15 10:40 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-15 12:17:22] -rwxr-xr-x 1 boinc boinc      7986 Mar 15 10:40 run_atlas
[2026-03-15 12:17:22] -rw-r--r-- 1 boinc boinc       105 Mar 15 10:40 job.xml
[2026-03-15 12:17:22] -rw-r--r-- 2 boinc boinc 213852458 Mar 15 10:40 EVNT.48967083._000922.pool.root.1
[2026-03-15 12:17:22] -rw-r--r-- 2 boinc boinc    597527 Mar 15 10:40 input.tar.gz
[2026-03-15 12:17:22] -rw-r--r-- 2 boinc boinc     15845 Mar 15 10:40 start_atlas.sh
[2026-03-15 12:17:22] drwxrwx--x 2 boinc boinc      4096 Mar 15 10:40 shared
[2026-03-15 12:17:22] -rw-r--r-- 1 boinc boinc         0 Mar 15 10:40 boinc_setup_complete
[2026-03-15 12:17:22] -rw-r--r-- 1 boinc boinc      6441 Mar 15 10:40 init_data.xml
[2026-03-15 12:17:22] -rw-r--r-- 1 boinc boinc         0 Mar 15 10:40 boinc_lockfile
[2026-03-15 12:17:22] -rw-r--r-- 1 boinc boinc      2563 Mar 15 10:40 pandaJob.out
[2026-03-15 12:17:22] -rw------- 1 boinc boinc   1006481 Mar 15 10:41 agis_schedconf.cvmfs.json
[2026-03-15 12:17:22] -rw------- 1 boinc boinc   1511579 Mar 15 10:41 agis_ddmendpoints.agis.ALL.json
[2026-03-15 12:17:22] -rw------- 1 boinc boinc       422 Mar 15 10:41 workernode_map.json
[2026-03-15 12:17:22] drwx------ 5 boinc boinc      4096 Mar 15 10:41 pilot3
[2026-03-15 12:17:22] -rw-r--r-- 1 boinc boinc       529 Mar 15 12:16 boinc_task_state.xml
[2026-03-15 12:17:22] -rw------- 1 boinc boinc 199704145 Mar 15 12:16 HITS.48967085._023754.pool.root.1
[2026-03-15 12:17:22] -rw------- 1 boinc boinc      1018 Mar 15 12:16 memory_monitor_summary.json
[2026-03-15 12:17:22] -rw------- 1 boinc boinc    257501 Mar 15 12:16 log.48967085._023754.job.log.tgz.1
[2026-03-15 12:17:22] -rw------- 1 boinc boinc      6307 Mar 15 12:16 heartbeat.json
[2026-03-15 12:17:22] -rw------- 1 boinc boinc        95 Mar 15 12:17 pilot_heartbeat.json
[2026-03-15 12:17:22] -rw-r--r-- 1 boinc boinc      8192 Mar 15 12:17 boinc_mmap_file
[2026-03-15 12:17:22] -rw-r--r-- 1 boinc boinc        27 Mar 15 12:17 wrapper_checkpoint.txt
[2026-03-15 12:17:22] -rw------- 1 boinc boinc      5005 Mar 15 12:17 pilotlog.txt
[2026-03-15 12:17:22] -rw------- 1 boinc boinc    830750 Mar 15 12:17 log.48967085._023754.job.log.1
[2026-03-15 12:17:22] -rw------- 1 boinc boinc       357 Mar 15 12:17 output.list
[2026-03-15 12:17:22] -rw-r--r-- 1 boinc boinc       620 Mar 15 12:17 runtime_log
[2026-03-15 12:17:22] -rw------- 1 boinc boinc   1105920 Mar 15 12:17 result.tar.gz
[2026-03-15 12:17:22] -rw------- 1 boinc boinc       660 Mar 15 12:17 tdLLDmDniL9n9Rq4apOajLDm4fhM0noT9bVooX4SDm89qLDmZOyAXo.diag
[2026-03-15 12:17:22] -rw-r--r-- 1 boinc boinc      8911 Mar 15 12:17 runtime_log.err
[2026-03-15 12:17:22] -rw-r--r-- 1 boinc boinc      7384 Mar 15 12:17 stderr.txt
[2026-03-15 12:17:22] HITS file was successfully produced:
[2026-03-15 12:17:22] -rw------- 1 boinc boinc 199704145 Mar 15 12:16 shared/HITS.pool.root.1
[2026-03-15 12:17:22]  *** Contents of shared directory: ***
[2026-03-15 12:17:22] total 405556
[2026-03-15 12:17:22] -rw-r--r-- 2 boinc boinc 213852458 Mar 15 10:40 ATLAS.root_0
[2026-03-15 12:17:22] -rw-r--r-- 2 boinc boinc    597527 Mar 15 10:40 input.tar.gz
[2026-03-15 12:17:22] -rw-r--r-- 2 boinc boinc     15845 Mar 15 10:40 start_atlas.sh
[2026-03-15 12:17:22] -rw------- 1 boinc boinc 199704145 Mar 15 12:16 HITS.pool.root.1
[2026-03-15 12:17:22] -rw------- 1 boinc boinc   1105920 Mar 15 12:17 result.tar.gz
12:17:23 (154736): run_atlas exited; CPU time 16287.685907
12:17:23 (154736): called boinc_finish(0)

</stderr_txt>
]]>

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